Pregenerated sensors for VRK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002205Ensembl transcript IDs: ENSMUST00000002275.15, ENSMUST00000125705.9, ENSMUST00000144515.9, ENSMUST00000147952.9, ENSMUST00000165957.8, ENSMUST00000171821.8
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTGTGGACTCCTGCTGCCTTCTTTGTAGGCCACGTGTTTGCCACCTaGGCAGTATCGGTAGGTGAAGCCATAGCCCACCAGGGTCACCTG | + |
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Preference number: 1 (lower is better) Translates to: VWTPAAFFVGHVFAT*AVSVGEAIAHQGHL Trigger: CAGGTGACCCTGGTGGGCTATGGCTTCACCTACCGATACTGCCCAGGTGGCAAACACGTGGCCTACAAAGAAGGCAGCAGGAGTCCACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR GCA 90 bp | TTTATTATGCCATCACAGAAATGCCATAGGGAGTGGAGTGGCTGCTaGCGCCGCCGCCGCCAGCATCCACTTACCTCCATCCACAGCTGC | + |
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Preference number: 1 (lower is better) Translates to: FIMPSQKCHREWSGC*RRRRQHPLTSIHSC Trigger: GCAGCTGTGGATGGAGGTAAGTGGATGCTGGCGGCGGCGGCGGCAGCAGCCACTCCACTCCCTATGGCATTTCTGTGATGGCATAATAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| 3UTR GCA 90 bp | CAGTTTATTATGCCATCACAGAAATGCCATAGGGAGTGGAGTGGCTaGTGCCGCCGCCGCCGCCAGCATCCACTTACCTCCATCCACAGC | + |
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Preference number: 1 (lower is better) Translates to: QFIMPSQKCHREWSG*CRRRRQHPLTSIHS Trigger: GCTGTGGATGGAGGTAAGTGGATGCTGGCGGCGGCGGCGGCAGCAGCCACTCCACTCCCTATGGCATTTCTGTGATGGCATAATAAACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| 3UTR TCA 90 bp | CTTCTTTGTAGGCCACGTGTTTGCCACCTGGGCAGTATCGGTAGGTaGAGCCATAGCCCACCAGGGTCACCTGGCTCAGATCCTCTGGAT | + |
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Preference number: 1 (lower is better) Translates to: LLCRPRVCHLGSIGR*SHSPPGSPGSDPLD Trigger: ATCCAGAGGATCTGAGCCAGGTGACCCTGGTGGGCTATGGCTTCACCTACCGATACTGCCCAGGTGGCAAACACGTGGCCTACAAAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR TCA 90 bp | TGTTGGGAAGGCAATTTGTCCATGGCAGGGACCCATAAAGCCACTTaGGCATACAGTAGCCCAAGGTCTGGAGATCGCTGCGGCGGGAGG | + |
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Preference number: 1 (lower is better) Translates to: CWEGNLSMAGTHKAT*AYSSPRSGDRCGGR Trigger: CCTCCCGCCGCAGCGATCTCCAGACCTTGGGCTACTGTATGCTCAAGTGGCTTTATGGGTCCCTGCCATGGACAAATTGCCTTCCCAACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR GCA 90 bp | CGGCCACACAGTCCCACGAGGCGCTCGGGGCTGTCCAGATACTTCTaGTTCTGCCTAGTTATCTTTTCGGTGTTGGGAAGGCAATTTGTC | + |
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Preference number: 1 (lower is better) Translates to: RPHSPTRRSGLSRYF*FCLVIFSVLGRQFV Trigger: GACAAATTGCCTTCCCAACACCGAAAAGATAACTAGGCAGAAGCAGAAGTATCTGGACAGCCCCGAGCGCCTCGTGGGACTGTGTGGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR CCA 90 bp | GCTTTGGGTTGTCATCCAGGGCTGACTGAAGGCTCCTCCCCAGGCTaGGGAATACTAGGAACCTGTACTTGTCCTGGTGAATGCCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: ALGCHPGLTEGSSPG*GILGTCTCPGECQS Trigger: GCTTTGGCATTCACCAGGACAAGTACAGGTTCCTAGTATTCCCCAGCCTGGGGAGGAGCCTTCAGTCAGCCCTGGATGACAACCCAAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR CCA 90 bp | TCCCTTGTGCAGGTCCATGCTAATGAACTCCAAGTCCCCATCGTGTaGACTCCTGCTGCCTTCTTTGTAGGCCACGTGTTTGCCACCTGG | + |
|
Preference number: 1 (lower is better) Translates to: SLVQVHANELQVPIV*TPAAFFVGHVFATW Trigger: CCAGGTGGCAAACACGTGGCCTACAAAGAAGGCAGCAGGAGTCCACACGATGGGGACTTGGAGTTCATTAGCATGGACCTGCACAAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR GCA 90 bp | CACAGTCCCACGAGGCGCTCGGGGCTGTCCAGATACTTCTGCTTCTaGCTAGTTATCTTTTCGGTGTTGGGAAGGCAATTTGTCCATGGC | + |
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Preference number: 1 (lower is better) Translates to: HSPTRRSGLSRYFCF*LVIFSVLGRQFVHG Trigger: GCCATGGACAAATTGCCTTCCCAACACCGAAAAGATAACTAGGCAGAAGCAGAAGTATCTGGACAGCCCCGAGCGCCTCGTGGGACTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR TCA 90 bp | CATCTCTCTGATACCACATGCTTTGGGTTGTCATCCAGGGCTGACTaGAGGCTCCTCCCCAGGCTGGGGAATACTAGGAACCTGTACTTG | + |
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Preference number: 1 (lower is better) Translates to: HLSDTTCFGLSSRAD*RLLPRLGNTRNLYL Trigger: CAAGTACAGGTTCCTAGTATTCCCCAGCCTGGGGAGGAGCCTTCAGTCAGCCCTGGATGACAACCCAAAGCATGTGGTATCAGAGAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR CCA 90 bp | CTAGGAACCTGTACTTGTCCTGGTGAATGCCAAAGCCGATACAGGTaGGGATGGCCAGGAGCGGGAGCAAGAACTGCTTCTTCCATTTGT | + |
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Preference number: 1 (lower is better) Translates to: LGTCTCPGECQSRYR*GWPGAGARTASSIC Trigger: ACAAATGGAAGAAGCAGTTCTTGCTCCCGCTCCTGGCCATCCCCACCTGTATCGGCTTTGGCATTCACCAGGACAAGTACAGGTTCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR GCA 90 bp | TTCAAACAGGCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTaGAAGTCGGAAGCTCTGAGGCCTTGTTCCAGCGGCCACACAGTC | + |
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Preference number: 1 (lower is better) Translates to: FKQASSHTTSCSTSS*KSEALRPCSSGHTV Trigger: GACTGTGTGGCCGCTGGAACAAGGCCTCAGAGCTTCCGACTTGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGCCTGTTTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR CCA 90 bp | ACCTGTACTTGTCCTGGTGAATGCCAAAGCCGATACAGGTGGGGATaGCCAGGAGCGGGAGCAAGAACTGCTTCTTCCATTTGTTCACTT | + |
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Preference number: 1 (lower is better) Translates to: TCTCPGECQSRYRWG*PGAGARTASSICSL Trigger: AAGTGAACAAATGGAAGAAGCAGTTCTTGCTCCCGCTCCTGGCCATCCCCACCTGTATCGGCTTTGGCATTCACCAGGACAAGTACAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR CCA 90 bp | GTAGGTGAAGCCATAGCCCACCAGGGTCACCTGGCTCAGATCCTCTaGATTCACAAAGACATTCTCAGCTGTCAGGTTCCCGTGAACATA | + |
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Preference number: 1 (lower is better) Translates to: VGEAIAHQGHLAQIL*IHKDILSCQVPVNI Trigger: TATGTTCACGGGAACCTGACAGCTGAGAATGTCTTTGTGAATCCAGAGGATCTGAGCCAGGTGACCCTGGTGGGCTATGGCTTCACCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR CCA 90 bp | CTTCTGCCTAGTTATCTTTTCGGTGTTGGGAAGGCAATTTGTCCATaGCAGGGACCCATAAAGCCACTTGAGCATACAGTAGCCCAAGGT | + |
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Preference number: 1 (lower is better) Translates to: LLPSYLFGVGKAICP*QGPIKPLEHTVAQG Trigger: ACCTTGGGCTACTGTATGCTCAAGTGGCTTTATGGGTCCCTGCCATGGACAAATTGCCTTCCCAACACCGAAAAGATAACTAGGCAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR-3UTR CCA 90 bp | GCCACACAGTCCCACGAGGCGCTCGGGGCTGTCCAGATACTTCTGCTTCTGCCTCAAAGCCGATACAGGTaGGGATGGCCAGGAGCGGGA | + |
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Preference number: 2 (lower is better) Translates to: ATQSHEALGAVQILLLLPQSRYR*GWPGAG Trigger: TCCCGCTCCTGGCCATCCCCACCTGTATCGGCTTTG...AGGCAGAAGCAGAAGTATCTGGACAGCCCCGAGCGCCTCGTGGGACTGTGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR CAA 90 bp | GCCTGCAGGCCACCTGAAGCACACATCTCTCTGATACCACATGCTTaGGGTTGTCATCCAGGGCTGACTGAAGGCTCCTCCCCAGGCTGG | + |
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Preference number: 2 (lower is better) Translates to: ACRPPEAHISLIPHA*GCHPGLTEGSSPGW Trigger: CCAGCCTGGGGAGGAGCCTTCAGTCAGCCCTGGATGACAACCCAAAGCATGTGGTATCAGAGAGATGTGTGCTTCAGGTGGCCTGCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR-3UTR TCA 90 bp | GCAATTTGTCCATGGCAGGGACCCATAAAGCCACTTGAGCATACAGTAGCCCAAGTTGTCATCCAGGGCTaGCTGAAGGCTCCTCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: AICPWQGPIKPLEHTVAQVVIQG*LKAPPQ Trigger: CTGGGGAGGAGCCTTCAGTCAGCCCTGGATGACAAC...TTGGGCTACTGTATGCTCAAGTGGCTTTATGGGTCCCTGCCATGGACAAATTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR-3UTR TCA 90 bp | AGGTCCATGCTAATGAACTCCAAGTCCCCATCGTGTGGACTCCTGCTGCCTTCTAGCCTGCAGGCCACCTaGAGCACACATCTCTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: RSMLMNSKSPSCGLLLPSSLQAT*STHLSD Trigger: ATCAGAGAGATGTGTGCTTCAGGTGGCCTGCAGGCT...AGAAGGCAGCAGGAGTCCACACGATGGGGACTTGGAGTTCATTAGCATGGACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR-3UTR GCA 90 bp | AGTCCCACGAGGCGCTCGGGGCTGTCCAGATACTTCTGCTTCTGCCTAGTTATCACTTGTCCTGGTGAATaGCAAAGCCGATACAGGTGG | + |
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Preference number: 2 (lower is better) Translates to: SPTRRSGLSRYFCFCLVITCPGE*QSRYRW Trigger: CCACCTGTATCGGCTTTGGCATTCACCAGGACAAGT...GATAACTAGGCAGAAGCAGAAGTATCTGGACAGCCCCGAGCGCCTCGTGGGACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR-3UTR CCA 90 bp | GCAATTTGTCCATGGCAGGGACCCATAAAGCCACTTGAGCATACAGTAGCCCAAAAATGCCATAGGGAGTaGAGTGGCTGCTGCCGCCGC | + |
|
Preference number: 2 (lower is better) Translates to: AICPWQGPIKPLEHTVAQKCHRE*SGCCRR Trigger: GCGGCGGCAGCAGCCACTCCACTCCCTATGGCATTT...TTGGGCTACTGTATGCTCAAGTGGCTTTATGGGTCCCTGCCATGGACAAATTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR-3UTR GCA 90 bp | AGGGTCACCTGGCTCAGATCCTCTGGATTCACAAAGACATTCTCAGCTGTCAGGAGCGGGAGCAAGAACTaGTTCTTCCATTTGTTCACT | + |
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Preference number: 2 (lower is better) Translates to: RVTWLRSSGFTKTFSAVRSGSKN*FFHLFT Trigger: AGTGAACAAATGGAAGAAGCAGTTCTTGCTCCCGCT...CCTGACAGCTGAGAATGTCTTTGTGAATCCAGAGGATCTGAGCCAGGTGACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR-3UTR CCA 90 bp | AGTTTATTATGCCATCACAGAAATGCCATAGGGAGTGGAGTGGCTGCTGCCGCCTCACTTGCAGAGGCTTaGCTACTCTCTGAAAGAAGT | + |
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Preference number: 2 (lower is better) Translates to: SLLCHHRNAIGSGVAAAASLAEA*LLSERS Trigger: ACTTCTTTCAGAGAGTAGCCAAGCCTCTGCAAGTGA...GGCGGCAGCAGCCACTCCACTCCCTATGGCATTTCTGTGATGGCATAATAAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR-3UTR GCA 90 bp | AATGCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCCTCCAGTTGTTCTACTTCAAGCTaGAAGTCGGAAGCTCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: NAHSRDSFRSYEFKQASSCSTSS*KSEALD Trigger: ATCCAGAGCTTCCGACTTGCAGCTTGAAGTAGAACA...ACTGGAGGCCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| 3UTR GCA 72 bp | TGGAGATCGCTGCGGCGGGAGGGTCCGCATCCCTTGTaGAGGTCCATGCTAATGAACTCCAAGTCCCCATCG | + |
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Preference number: 3 (lower is better) Translates to: WRSLRREGPHPL*RSMLMNSKSPS Trigger: CGATGGGGACTTGGAGTTCATTAGCATGGACCTGCACAAGGGATGCGGACCCTCCCGCCGCAGCGATCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR TCA 72 bp | AGGCCACGTGTTTGCCACCTGGGCAGTATCGGTAGGTaGAGCCATAGCCCACCAGGGTCACCTGGCTCAGAT | + |
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Preference number: 3 (lower is better) Translates to: RPRVCHLGSIGR*SHSPPGSPGSD Trigger: ATCTGAGCCAGGTGACCCTGGTGGGCTATGGCTTCACCTACCGATACTGCCCAGGTGGCAAACACGTGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR CCA 72 bp | CCTGCTGCCTTCTTTGTAGGCCACGTGTTTGCCACCTaGGCAGTATCGGTAGGTGAAGCCATAGCCCACCAG | + |
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Preference number: 3 (lower is better) Translates to: PAAFFVGHVFAT*AVSVGEAIAHQ Trigger: CTGGTGGGCTATGGCTTCACCTACCGATACTGCCCAGGTGGCAAACACGTGGCCTACAAAGAAGGCAGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR-3UTR CAA 90 bp | GCGGCCACACAGTCCCACGAGGCGCTCGGGGCTGTCCAGATACTTCTGCTTCTGAACTGCTTCTTCCATTaGTTCACTTGCAGAGGCTTG | + |
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Preference number: 3 (lower is better) Translates to: AATQSHEALGAVQILLLLNCFFH*FTCRGL Trigger: CAAGCCTCTGCAAGTGAACAAATGGAAGAAGCAGTT...CAGAAGCAGAAGTATCTGGACAGCCCCGAGCGCCTCGTGGGACTGTGTGGCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR TCA 72 bp | AGGCTGGGGAATACTAGGAACCTGTACTTGTCCTGGTaGATGCCAAAGCCGATACAGGTGGGGATGGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: RLGNTRNLYLSW*MPKPIQVGMAR Trigger: CCTGGCCATCCCCACCTGTATCGGCTTTGGCATTCACCAGGACAAGTACAGGTTCCTAGTATTCCCCAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR TCA 72 bp | GATACCACATGCTTTGGGTTGTCATCCAGGGCTGACTaGAGGCTCCTCCCCAGGCTGGGGAATACTAGGAAC | + |
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Preference number: 3 (lower is better) Translates to: DTTCFGLSSRAD*RLLPRLGNTRN Trigger: GTTCCTAGTATTCCCCAGCCTGGGGAGGAGCCTTCAGTCAGCCCTGGATGACAACCCAAAGCATGTGGTATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR TCA 72 bp | CTTCATGTTCTACTTCAAGCTGCAAGTCGGAAGCTCTaGGGCCTTGTTCCAGCGGCCACACAGTCCCACGAG | + |
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Preference number: 3 (lower is better) Translates to: LHVLLQAASRKL*GLVPAATQSHE Trigger: CTCGTGGGACTGTGTGGCCGCTGGAACAAGGCCTCAGAGCTTCCGACTTGCAGCTTGAAGTAGAACATGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR GCA 72 bp | TGGGGAATACTAGGAACCTGTACTTGTCCTGGTGAATaGCAAAGCCGATACAGGTGGGGATGGCCAGGAGCG | + |
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Preference number: 3 (lower is better) Translates to: WGILGTCTCPGE*QSRYRWGWPGA Trigger: CGCTCCTGGCCATCCCCACCTGTATCGGCTTTGGCATTCACCAGGACAAGTACAGGTTCCTAGTATTCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR GCA 72 bp | AGTCCCACGAGGCGCTCGGGGCTGTCCAGATACTTCTaGTTCTGCCTAGTTATCTTTTCGGTGTTGGGAAGG | + |
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Preference number: 3 (lower is better) Translates to: SPTRRSGLSRYF*FCLVIFSVLGR Trigger: CCTTCCCAACACCGAAAAGATAACTAGGCAGAAGCAGAAGTATCTGGACAGCCCCGAGCGCCTCGTGGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR CCA 72 bp | TGTCCTGGTGAATGCCAAAGCCGATACAGGTGGGGATaGCCAGGAGCGGGAGCAAGAACTGCTTCTTCCATT | + |
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Preference number: 3 (lower is better) Translates to: CPGECQSRYRWG*PGAGARTASSI Trigger: AATGGAAGAAGCAGTTCTTGCTCCCGCTCCTGGCCATCCCCACCTGTATCGGCTTTGGCATTCACCAGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR CCA 72 bp | TGTACTTGTCCTGGTGAATGCCAAAGCCGATACAGGTaGGGATGGCCAGGAGCGGGAGCAAGAACTGCTTCT | + |
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Preference number: 3 (lower is better) Translates to: CTCPGECQSRYR*GWPGAGARTAS Trigger: AGAAGCAGTTCTTGCTCCCGCTCCTGGCCATCCCCACCTGTATCGGCTTTGGCATTCACCAGGACAAGTACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR CCA 72 bp | TGTCATCCAGGGCTGACTGAAGGCTCCTCCCCAGGCTaGGGAATACTAGGAACCTGTACTTGTCCTGGTGAA | + |
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Preference number: 3 (lower is better) Translates to: CHPGLTEGSSPG*GILGTCTCPGE Trigger: TTCACCAGGACAAGTACAGGTTCCTAGTATTCCCCAGCCTGGGGAGGAGCCTTCAGTCAGCCCTGGATGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR TCA 72 bp | GGCAATTTGTCCATGGCAGGGACCCATAAAGCCACTTaGGCATACAGTAGCCCAAGGTCTGGAGATCGCTGC | + |
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Preference number: 3 (lower is better) Translates to: GNLSMAGTHKAT*AYSSPRSGDRC Trigger: GCAGCGATCTCCAGACCTTGGGCTACTGTATGCTCAAGTGGCTTTATGGGTCCCTGCCATGGACAAATTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR GCA 72 bp | GCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTaGAAGTCGGAAGCTCTGAGGCCTTGTTCCAGCGGC | + |
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Preference number: 3 (lower is better) Translates to: ASSHTTSCSTSS*KSEALRPCSSG Trigger: GCCGCTGGAACAAGGCCTCAGAGCTTCCGACTTGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR CCA 72 bp | CAGGTCCATGCTAATGAACTCCAAGTCCCCATCGTGTaGACTCCTGCTGCCTTCTTTGTAGGCCACGTGTTT | + |
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Preference number: 3 (lower is better) Translates to: QVHANELQVPIV*TPAAFFVGHVF Trigger: AAACACGTGGCCTACAAAGAAGGCAGCAGGAGTCCACACGATGGGGACTTGGAGTTCATTAGCATGGACCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR GCA 72 bp | CATTTTCATGGAGATACTCCAGAGCATCCAGCAGCCTaGAGGCCACCTGAAGCACACATCTCTCTGATACCA | + |
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Preference number: 3 (lower is better) Translates to: HFHGDTPEHPAA*RPPEAHISLIP Trigger: TGGTATCAGAGAGATGTGTGCTTCAGGTGGCCTGCAGGCTGCTGGATGCTCTGGAGTATCTCCATGAAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR GCA 72 bp | ACGAGGCGCTCGGGGCTGTCCAGATACTTCTGCTTCTaGCTAGTTATCTTTTCGGTGTTGGGAAGGCAATTT | + |
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Preference number: 3 (lower is better) Translates to: TRRSGLSRYFCF*LVIFSVLGRQF Trigger: AAATTGCCTTCCCAACACCGAAAAGATAACTAGGCAGAAGCAGAAGTATCTGGACAGCCCCGAGCGCCTCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR-3UTR CAA 90 bp | CCTGGCTCAGATCCTCTGGATTCACAAAGACATTCTCAGCTGTCAGGTTCCCGTCTTCCATTTGTTCACTaGCAGAGGCTTGGCTACTCT | + |
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Preference number: 3 (lower is better) Translates to: PGSDPLDSQRHSQLSGSRLPFVH*QRLGYS Trigger: AGAGTAGCCAAGCCTCTGCAAGTGAACAAATGGAAG...ACGGGAACCTGACAGCTGAGAATGTCTTTGTGAATCCAGAGGATCTGAGCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| 3UTR CCA 72 bp | AGTTATCTTTTCGGTGTTGGGAAGGCAATTTGTCCATaGCAGGGACCCATAAAGCCACTTGAGCATACAGTA | + |
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Preference number: 3 (lower is better) Translates to: SYLFGVGKAICP*QGPIKPLEHTV Trigger: TACTGTATGCTCAAGTGGCTTTATGGGTCCCTGCCATGGACAAATTGCCTTCCCAACACCGAAAAGATAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| CDS-3UTR CCA 90 bp | CCGCCGCCGCCGCCAGCATCCACTTACCTCCATCCACAGCTGCCAGAGCTGAGAGGCTGTTCCTCAGCGTaGCATAGGGTGGCTTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: PPPPPASTYLHPQLPELRGCSSA*HRVASP Trigger: AGGAGAAGCCACCCTATGCCACGCTGAGGAACAGCC...TCTCAGCTCTGGCAGCTGTGGATGGAGGTAAGTGGATGCTGGCGGCGGCGGCGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| CDS-3UTR GCA 90 bp | GCCGCCGCCGCCAGCATCCACTTACCTCCATCCACAGCTGCCAGAGCTGAGACATGTTGGAAAGTGGGCTaGCTTTGGGGGTCAGGGGTC | + |
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Preference number: 4 (lower is better) Translates to: AAAASIHLPPSTAARAETCWKVG*LWGSGV Trigger: GACCCCTGACCCCCAAAGGCAGCCCACTTTCCAACA...TGTCTCAGCTCTGGCAGCTGTGGATGGAGGTAAGTGGATGCTGGCGGCGGCGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR CCA 90 bp | GCCGCCAGCATCCACTTACCTCCATCCACAGCTGCCAGAGCTGAGACAGGGAGGAAAGTGGGCTGCCTTTaGGGGTCAGGGGTCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: AASIHLPPSTAARAETGRKVGCL*GSGVCS Trigger: GGAGCAGACCCCTGACCCCCAAAGGCAGCCCACTTT...CCTCCCTGTCTCAGCTCTGGCAGCTGTGGATGGAGGTAAGTGGATGCTGGCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR CCA 90 bp | TTATTATGCCATCACAGAAATGCCATAGGGAGTGGAGTGGCTGCTGCCGCCGCCGAGCCTGGAGTGAGGTaGTCACCCGGGTCCGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: LLCHHRNAIGSGVAAAAAEPGVR*SPGSAS Trigger: TGAAGCGGACCCGGGTGACCACCTCACTCCAGGCTC...GGCGGCGGCAGCAGCCACTCCACTCCCTATGGCATTTCTGTGATGGCATAATAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR CCA 90 bp | ACCTGTACTTGTCCTGGTGAATGCCAAAGCCGATACAGGTGGGGATGGCCAGGACCTGTGGCTAGAGCCTaGAGTGAGGTGGTCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TCTCPGECQSRYRWGWPGPVARA*SEVVTR Trigger: CCGGGTGACCACCTCACTCCAGGCTCTAGCCACAGG...TCCTGGCCATCCCCACCTGTATCGGCTTTGGCATTCACCAGGACAAGTACAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
||
| CDS-3UTR CCA 90 bp | ACCTGGGCAGTATCGGTAGGTGAAGCCATAGCCCACCAGGGTCACCTGGCTCAGTCAGCTCTGTTCCTGTaGCTAGAGCCTGGAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TWAVSVGEAIAHQGHLAQSALFL*LEPGVR Trigger: CCTCACTCCAGGCTCTAGCCACAGGAACAGAGCTGA...CTGAGCCAGGTGACCCTGGTGGGCTATGGCTTCACCTACCGATACTGCCCAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
||
| CDS-3UTR TCA 90 bp | GCCGCCAGCATCCACTTACCTCCATCCACAGCTGCCAGAGCTGAGACAGGGAGGAGTCAAGGTGTTGTCTaGCCCAGAACTGTCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: AASIHLPPSTAARAETGRSQGVV*PRTVTV Trigger: GACTGTGACAGTTCTGGGTCAGACAACACCTTGACT...CCTCCCTGTCTCAGCTCTGGCAGCTGTGGATGGAGGTAAGTGGATGCTGGCGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
||
| CDS-3UTR TCA 90 bp | CCGCCGCCGCCGCCAGCATCCACTTACCTCCATCCACAGCTGCCAGAGCTGAGAAAGCACACATCTCTCTaGTACCACATGCTTTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PPPPPASTYLHPQLPELRKHTSL*YHMLWV Trigger: AACCCAAAGCATGTGGTATCAGAGAGATGTGTGCTT...TCTCAGCTCTGGCAGCTGTGGATGGAGGTAAGTGGATGCTGGCGGCGGCGGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS-3UTR TCA 90 bp | GCCGCCGCCGCCAGCATCCACTTACCTCCATCCACAGCTGCCAGAGCTGAGACAAGAAGTGACAGTGTGTaGGCATTTCACTTTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AAAASIHLPPSTAARAETRSDSV*AFHFLG Trigger: CCCAAGAAAGTGAAATGCTCACACACTGTCACTTCT...TGTCTCAGCTCTGGCAGCTGTGGATGGAGGTAAGTGGATGCTGGCGGCGGCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
||
| CDS-3UTR TCA 90 bp | GCGGCCACACAGTCCCACGAGGCGCTCGGGGCTGTCCAGATACTTCTGCTTCTGAGAAGTGACAGTGTGTaGGCATTTCACTTTCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AATQSHEALGAVQILLLLRSDSV*AFHFLG Trigger: CCCAAGAAAGTGAAATGCTCACACACTGTCACTTCT...CAGAAGCAGAAGTATCTGGACAGCCCCGAGCGCCTCGTGGGACTGTGTGGCCGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| CDS-3UTR GCA 90 bp | GGTGGGGATGGCCAGGAGCGGGAGCAAGAACTGCTTCTTCCATTTGTTCACTTGTCACGGCAGACTGGGTaGCTCCATCCTCCTCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: GGDGQEREQELLLPFVHLSRQTG*LHPPLQ Trigger: CTGTAGAGGAGGATGGAGGCACCCAGTCTGCCGTGA...CAAGTGAACAAATGGAAGAAGCAGTTCTTGCTCCCGCTCCTGGCCATCCCCACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
||
| CDS-3UTR CCA 90 bp | GCCACACAGTCCCACGAGGCGCTCGGGGCTGTCCAGATACTTCTGCTTCTGCCTGAGAGGTTTCAAAACTaGAGTTCAGGTCTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ATQSHEALGAVQILLLLPERFQN*SSGLSW Trigger: CCAGGAGAGACCTGAACTCCAGTTTTGAAACCTCTC...AGGCAGAAGCAGAAGTATCTGGACAGCCCCGAGCGCCTCGTGGGACTGTGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
||
| CDS-3UTR CCA 90 bp | GTCCATGCTAATGAACTCCAAGTCCCCATCGTGTGGACTCCTGCTGCCTTCTTTGAGCCTGGAGTGAGGTaGTCACCCGGGTCCGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VHANELQVPIVWTPAAFFEPGVR*SPGSAS Trigger: TGAAGCGGACCCGGGTGACCACCTCACTCCAGGCTC...AAAGAAGGCAGCAGGAGTCCACACGATGGGGACTTGGAGTTCATTAGCATGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
||
| CDS-3UTR TCA 90 bp | GCCACACAGTCCCACGAGGCGCTCGGGGCTGTCCAGATACTTCTGCTTCTGCCTAGGGCAGAACTTGAATaGTACCTTGACACTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ATQSHEALGAVQILLLLPRAELE*YLDTFA Trigger: GGCAAAAGTGTCAAGGTATCATTCAAGTTCTGCCCT...AGGCAGAAGCAGAAGTATCTGGACAGCCCCGAGCGCCTCGTGGGACTGTGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
||
| CDS-3UTR GCA 90 bp | CCGCCGCCGCCGCCAGCATCCACTTACCTCCATCCACAGCTGCCAGAGCTGAGAAGATACTTCTGCTTCTaGCTAGTTATCTTTTCGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PPPPPASTYLHPQLPELRRYFCF*LVIFSV Trigger: CACCGAAAAGATAACTAGGCAGAAGCAGAAGTATCT...TCTCAGCTCTGGCAGCTGTGGATGGAGGTAAGTGGATGCTGGCGGCGGCGGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| CDS-3UTR CCA 90 bp | GCTGCCTTCTTTGTAGGCCACGTGTTTGCCACCTGGGCAGTATCGGTAGGTGAACTGTCACAGTCAGAGTaGCGGGAGAGTGGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AAFFVGHVFATWAVSVGELSQSE*RESGRE Trigger: TTCTCTCCCACTCTCCCGCCACTCTGACTGTGACAG...TTCACCTACCGATACTGCCCAGGTGGCAAACACGTGGCCTACAAAGAAGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCCAGAGCTGAGACAGGGAGGAGTTTCACATTACATGACATGACTCAGGTTCCTGTGGCTAGAGCCTaGAGTGAGGTGGTCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AARAETGRSFTLHDMTQVPVARA*SEVVTR Trigger: CCGGGTGACCACCTCACTCCAGGCTCTAGCCACAGG...AACCTGAGTCATGTCATGTAATGTGAAACTCCTCCCTGTCTCAGCTCTGGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
||
| CDS-3UTR GCA 90 bp | CAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCCTCCAGTCACACTACTTGGGGTCTGCTCCGGGTaGCTGTGGCCCTGTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGILLGAMSSNRPPVTLLGVCSG*LWPCQE Trigger: CTCCTGACAGGGCCACAGGCACCCGGAGCAGACCCC...AAGTAGTGTGACTGGAGGCCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
||
| CDS-3UTR GCA 90 bp | GCCGCCGCCGCCAGCATCCACTTACCTCCATCCACAGCTGCCAGAGCTGAGACACTGTCCAGATACTTCTaGTTCTGCCTAGTTATCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AAAASIHLPPSTAARAETLSRYF*FCLVIF Trigger: AAAGATAACTAGGCAGAAGCAGAAGTATCTGGACAG...TGTCTCAGCTCTGGCAGCTGTGGATGGAGGTAAGTGGATGCTGGCGGCGGCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| 3UTR CAA 72 bp | CCACCTGAAGCACACATCTCTCTGATACCACATGCTTaGGGTTGTCATCCAGGGCTGACTGAAGGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PPEAHISLIPHA*GCHPGLTEGSS Trigger: GGAGGAGCCTTCAGTCAGCCCTGGATGACAACCCAAAGCATGTGGTATCAGAGAGATGTGTGCTTCAGGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| CDS-3UTR TCA 90 bp | GCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTGCAAGTCGGAAGCTCTGGTCCGCTTCAGAGTCTaGGGGCTCTGCCTGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASSHTTSCSTSSCKSEALVRFRV*GLCLLE Trigger: TTCCAACAGGCAGAGCCCTCAGACTCTGAAGCGGAC...CAGAGCTTCCGACTTGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR CCA 90 bp | GAGTTCAAACAGGCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTGCAAGGGCGTCACGGCAGACTaGGTGCCTCCATCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EFKQASSHTTSCSTSSCKGVTAD*VPPSSS Trigger: AGAGGAGGATGGAGGCACCCAGTCTGCCGTGACGCC...CTTGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGCCTGTTTGAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR TCA 90 bp | GAGCAAGAACTGCTTCTTCCATTTGTTCACTTGCAGAGGCTTGGCTACTCTCTGGTCCGCTTCAGAGTCTaGGGGCTCTGCCTGTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EQELLLPFVHLQRLGYSLVRFRV*GLCLLE Trigger: TTCCAACAGGCAGAGCCCTCAGACTCTGAAGCGGAC...CAGAGAGTAGCCAAGCCTCTGCAAGTGAACAAATGGAAGAAGCAGTTCTTGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| CDS-3UTR TCA 90 bp | GAGTTCAAACAGGCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTGCAAGGTTGTCATCCAGGGCTaGCTGAAGGCTCCTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EFKQASSHTTSCSTSSCKVVIQG*LKAPPQ Trigger: CTGGGGAGGAGCCTTCAGTCAGCCCTGGATGACAAC...CTTGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGCCTGTTTGAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS-3UTR CCA 90 bp | GCGGTGAGAATGCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGGGCGTCACGGCAGACTaGGTGCCTCCATCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVRMHIQGILLGAMSSNRGVTAD*VPPSSS Trigger: AGAGGAGGATGGAGGCACCCAGTCTGCCGTGACGCC...CCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGCATTCTCACCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR CCA 90 bp | GCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTGCAAGTCGGAAGCTCTGAGAGTGGCGGGAGAGTaGGAGAGAAGTGACAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASSHTTSCSTSSCKSEALRVAGE*ERSDSV Trigger: CACACTGTCACTTCTCTCCCACTCTCCCGCCACTCT...CAGAGCTTCCGACTTGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR CCA 90 bp | GCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTGCAAGTCGGAAGCTCTGCTGTCACAGTCAGAGTaGCGGGAGAGTGGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ASSHTTSCSTSSCKSEALLSQSE*RESGRE Trigger: TTCTCTCCCACTCTCCCGCCACTCTGACTGTGACAG...CAGAGCTTCCGACTTGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR TCA 90 bp | AACAGTTTATTATGCCATCACAGAAATGCCATAGGGAGTGGAGTGGCTGCTGCCAGCCTGCAGGCCACCTaGAGCACACATCTCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NSLLCHHRNAIGSGVAAASLQAT*STHLSD Trigger: ATCAGAGAGATGTGTGCTTCAGGTGGCCTGCAGGCT...GGCAGCAGCCACTCCACTCCCTATGGCATTTCTGTGATGGCATAATAAACTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| CDS-3UTR GCA 90 bp | CACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCCTCCAGTCACAGAGCATCCAGCAGCCTaGAGGCCACCTGAAGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: HIQGILLGAMSSNRPPVTEHPAA*RPPEAH Trigger: GTGTGCTTCAGGTGGCCTGCAGGCTGCTGGATGCTC...TGTGACTGGAGGCCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| CDS-3UTR CCA 90 bp | GGAGCGGTGAGAATGCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACTGCTCCGGGTGCCTGTaGCCCTGTCAGGAGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GAVRMHIQGILLGAMSSNCSGCL*PCQEKS Trigger: TGACTTCTCCTGACAGGGCCACAGGCACCCGGAGCA...GTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGCATTCTCACCGCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR CCA 90 bp | GCGGTGAGAATGCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGTGCTCCGGGTGCCTGTaGCCCTGTCAGGAGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: AVRMHIQGILLGAMSSNRCSGCL*PCQEKS Trigger: TGACTTCTCCTGACAGGGCCACAGGCACCCGGAGCA...CCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGCATTCTCACCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR CCA 90 bp | ATGCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCCTCCAGTCAAAGTGGGCTGCCTTTaGGGGTCAGGGGTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MHIQGILLGAMSSNRPPVKVGCL*GSGVCS Trigger: GGAGCAGACCCCTGACCCCCAAAGGCAGCCCACTTT...GACTGGAGGCCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR CCA 90 bp | TTATTATGCCATCACAGAAATGCCATAGGGAGTGGAGTGGCTGCTGCCGCCGCCTCACTTGCAGAGGCTTaGCTACTCTCTGAAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLCHHRNAIGSGVAAAAASLAEA*LLSERS Trigger: ACTTCTTTCAGAGAGTAGCCAAGCCTCTGCAAGTGA...GGCGGCGGCAGCAGCCACTCCACTCCCTATGGCATTTCTGTGATGGCATAATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| CDS-3UTR CCA 90 bp | GCTGCCAGAGCTGAGACAGGGAGGAGTTTCACATTACATGACATGACTCAGGTTCACGTGTTTGCCACCTaGGCAGTATCGGTAGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: AARAETGRSFTLHDMTQVHVFAT*AVSVGE Trigger: TTCACCTACCGATACTGCCCAGGTGGCAAACACGTG...AACCTGAGTCATGTCATGTAATGTGAAACTCCTCCCTGTCTCAGCTCTGGCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| CDS-3UTR TCA 90 bp | GCTGCCAGAGCTGAGACAGGGAGGAGTTTCACATTACATGACATGACTCAGGTTAGAAGTTCTGCTCATTaGAAAGGCGCCCATCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: AARAETGRSFTLHDMTQVRSSAH*KGAHPW Trigger: CCAAGGATGGGCGCCTTTTCAATGAGCAGAACTTCT...AACCTGAGTCATGTCATGTAATGTGAAACTCCTCCCTGTCTCAGCTCTGGCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| CDS-3UTR GCA 90 bp | GTCACACTACTTCATGTTCTACTTCAAGCTGCAAGTCGGAAGCTCTGGATTCCACTACAGGCAGGGCCTTaGCACAGTAAGGGCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: VTLLHVLLQAASRKLWIPLQAGP*HSKGRT Trigger: AGTTCTGCCCTTACTGTGGCAAGGCCCTGCCTGTAG...TGGAATCCAGAGCTTCCGACTTGCAGCTTGAAGTAGAACATGAAGTAGTGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS-3UTR CCA 90 bp | GAGTTCAAACAGGCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTGCAAGTCAGCTCTGTTCCTGTaGCTAGAGCCTGGAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EFKQASSHTTSCSTSSCKSALFL*LEPGVR Trigger: CCTCACTCCAGGCTCTAGCCACAGGAACAGAGCTGA...CTTGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGCCTGTTTGAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
||
| CDS-3UTR CCA 90 bp | AGCGGTGAGAATGCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGCAAAGCCGATACAGGTaGGGATGGCCAGGAGCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGENAHSRDSFRSYEFKQQSRYR*GWPGAG Trigger: TCCCGCTCCTGGCCATCCCCACCTGTATCGGCTTTG...CTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGCATTCTCACCGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS-3UTR CCA 90 bp | GCGGTGAGAATGCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGGGCTCCTCCCCAGGCTaGGGAATACTAGGAACCTGT | + |
|
Preference number: 4 (lower is better) Translates to: AVRMHIQGILLGAMSSNRGSSPG*GILGTC Trigger: ACAGGTTCCTAGTATTCCCCAGCCTGGGGAGGAGCC...CCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGCATTCTCACCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS-3UTR GCA 90 bp | GCGGTGAGAATGCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCTACAGGCAGGGCCTTaGCACAGTAAGGGCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: AVRMHIQGILLGAMSSNRLQAGP*HSKGRT Trigger: AGTTCTGCCCTTACTGTGGCAAGGCCCTGCCTGTAG...CCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGCATTCTCACCGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
||
| CDS-3UTR GCA 90 bp | GTGAGAATGCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCCTTCACGGCAGACTGGGTaGCTCCATCCTCCTCTACAG | + |
|
Preference number: 4 (lower is better) Translates to: VRMHIQGILLGAMSSNRPSRQTG*LHPPLQ Trigger: CTGTAGAGGAGGATGGAGGCACCCAGTCTGCCGTGA...AGGCCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGCATTCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
||
| CDS-3UTR GCA 90 bp | GTGAGAATGCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCCTTGTTGGAAAGTGGGCTaGCTTTGGGGGTCAGGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VRMHIQGILLGAMSSNRPCWKVG*LWGSGV Trigger: GACCCCTGACCCCCAAAGGCAGCCCACTTTCCAACA...AGGCCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGCATTCTCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
||
| CDS-3UTR GCA 90 bp | GCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTGCAAGTCGGAAGCTCTGCTCTCTGATACCACATaGTTTGGGTTGTCATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASSHTTSCSTSSCKSEALLSDTT*FGLSSR Trigger: CCTGGATGACAACCCAAAGCATGTGGTATCAGAGAG...CAGAGCTTCCGACTTGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS-3UTR GCA 90 bp | CAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCCTCCAGTCACACTACTTTGTAGGCCACGTGTTTaGCACCTGGGCAGTATCGGT | + |
|
Preference number: 4 (lower is better) Translates to: QGILLGAMSSNRPPVTLLCRPRV*HLGSIG Trigger: ACCGATACTGCCCAGGTGGCAAACACGTGGCCTACA...AAGTAGTGTGACTGGAGGCCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS-3UTR GCA 90 bp | GCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCCTCCAGTCACGGTCCGCATCCCTTGTaGAGGTCCATGCTAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: AHSRDSFRSYEFKQASSHGPHPL*RSMLMN Trigger: GTTCATTAGCATGGACCTGCACAAGGGATGCGGACC...GTGACTGGAGGCCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS-3UTR CCA 90 bp | GGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCCTCCAGTCACACTACTTCATAGAGTGGCGGGAGAGTaGGAGAGAAGTGACAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GILLGAMSSNRPPVTLLHRVAGE*ERSDSV Trigger: CACACTGTCACTTCTCTCCCACTCTCCCGCCACTCT...ATGAAGTAGTGTGACTGGAGGCCTGTTTGAACTCATAGCTCCTAAAAGAATCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
||
| CDS-3UTR CCA 90 bp | GAGTTCAAACAGGCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTGCAAGCAAGTCCCCATCGTGTaGACTCCTGCTGCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EFKQASSHTTSCSTSSCKQVPIV*TPAAFF Trigger: AAAGAAGGCAGCAGGAGTCCACACGATGGGGACTTG...CTTGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGCCTGTTTGAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS-3UTR GCA 90 bp | GCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCCTCCAGTCACACTTGTCCTGGTGAATaGCAAAGCCGATACAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AHSRDSFRSYEFKQASSHTCPGE*QSRYRW Trigger: CCACCTGTATCGGCTTTGGCATTCACCAGGACAAGT...GTGACTGGAGGCCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS-3UTR CCA 90 bp | AACAGTTTATTATGCCATCACAGAAATGCCATAGGGAGTGGAGTGGCTGCTGCCAAGGCAATTTGTCCATaGCAGGGACCCATAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NSLLCHHRNAIGSGVAAAKAICP*QGPIKP Trigger: TGGCTTTATGGGTCCCTGCCATGGACAAATTGCCTT...GGCAGCAGCCACTCCACTCCCTATGGCATTTCTGTGATGGCATAATAAACTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS-3UTR TCA 90 bp | GCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCCTCCAGTCACAGAGTGGGAGAGAAGTaGCAGTGTGTGAGCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AHSRDSFRSYEFKQASSHRVGEK*QCVSIS Trigger: TGAAATGCTCACACACTGTCACTTCTCTCCCACTCT...GTGACTGGAGGCCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR TCA 90 bp | GAGTTCAAACAGGCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTGCAAGCCTTGGAGTCCAGTTTaGGTGAGAATCTCCACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EFKQASSHTTSCSTSSCKPWSPV*VRISTS Trigger: AGAAGTGGAGATTCTCACTCAAACTGGACTCCAAGG...CTTGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGCCTGTTTGAACTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| CDS-3UTR TCA 90 bp | ATGAGTTCAAACAGGCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTGCAGCTTCTCCTCATAATTaGGGGCCATCACCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MSSNRPPVTLLHVLLQAAASPHN*GPSPPS Trigger: TGAAGGTGGTGATGGCCCTCAATTATGAGGAGAAGC...TGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGCCTGTTTGAACTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| CDS-3UTR GCA 90 bp | AACAGGCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTGCAAGTCGGAAGAGCGGGAGCAAGAACTaGTTCTTCCATTTGTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: NRPPVTLLHVLLQAASRKSGSKN*FFHLFT Trigger: AGTGAACAAATGGAAGAAGCAGTTCTTGCTCCCGCT...CTTCCGACTTGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGCCTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| CDS-3UTR CCA 90 bp | GCGGTGAGAATGCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGGAGAATCTCCACTTCTaGGTCCTTGATTCAGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AVRMHIQGILLGAMSSNRENLHF*VLDSEG Trigger: CCCCTCTGAATCAAGGACCCAGAAGTGGAGATTCTC...CCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGCATTCTCACCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| CDS-3UTR CCA 90 bp | GCGGTGAGAATGCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCAGCGTGGCATAGGGTaGCTTCTCCTCATAATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AVRMHIQGILLGAMSSNRQRGIG*LLLIIE Trigger: CTCAATTATGAGGAGAAGCCACCCTATGCCACGCTG...CCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGCATTCTCACCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS-3UTR TCA 90 bp | ATGAGTTCAAACAGGCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTGCAGGCTTGGCTACTCTCTaGAAGAAGTTCTGCTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: MSSNRPPVTLLHVLLQAAGLATL*KKFCSL Trigger: CAATGAGCAGAACTTCTTTCAGAGAGTAGCCAAGCC...TGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGCCTGTTTGAACTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS-3UTR CCA 90 bp | CATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCCTCCAGTCACACTGAGAGGTTTCAAAACTaGAGTTCAGGTCTCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSRDSFRSYEFKQASSHTERFQN*SSGLSW Trigger: CCAGGAGAGACCTGAACTCCAGTTTTGAAACCTCTC...AGTGTGACTGGAGGCCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
||
| CDS-3UTR CCA 90 bp | GCGGTGAGAATGCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCAGTGTTTCCCATTCTaGTCTGTCAGCTCTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AVRMHIQGILLGAMSSNRQCFPF*SVSSVP Trigger: AGGAACAGAGCTGACAGACCAGAATGGGAAACACTG...CCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGCATTCTCACCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
||
| CDS-3UTR TCA 90 bp | CAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCCTCCAGTCACACTACTTAGGGCAGAACTTGAATaGTACCTTGACACTTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: QGILLGAMSSNRPPVTLLRAELE*YLDTFA Trigger: GGCAAAAGTGTCAAGGTATCATTCAAGTTCTGCCCT...AAGTAGTGTGACTGGAGGCCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR CCA 90 bp | GTGAGAATGCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCCTCAGTGTTTCCCATTCTaGTCTGTCAGCTCTGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRMHIQGILLGAMSSNRPQCFPF*SVSSVP Trigger: AGGAACAGAGCTGACAGACCAGAATGGGAAACACTG...AGGCCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGCATTCTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR CCA 90 bp | ATGAGTTCAAACAGGCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTGCACTGGCTCAGATCCTCTaGATTCACAAAGACATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MSSNRPPVTLLHVLLQAALAQIL*IHKDIL Trigger: GAGAATGTCTTTGTGAATCCAGAGGATCTGAGCCAG...TGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGCCTGTTTGAACTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS-3UTR CCA 90 bp | ATGAGTTCAAACAGGCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTGCAAGCATTTCACTTTCTTaGGAGAGGTTTCAAAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: MSSNRPPVTLLHVLLQAASISLS*ERFQNW Trigger: CCAGTTTTGAAACCTCTCCCAAGAAAGTGAAATGCT...TGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGCCTGTTTGAACTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR CCA 90 bp | GGAGCGGTGAGAATGCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACTTATCTTTTCGGTGTTaGGAAGGCAATTTGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: GAVRMHIQGILLGAMSSNLSFRC*EGNLSM Trigger: CATGGACAAATTGCCTTCCCAACACCGAAAAGATAA...GTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGCATTCTCACCGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS TCA 90 bp | GCTAGAGCCTGGAGTGAGGTGGTCACCCGGGTCCGCTTCAGAGTCTaGGGGCTCTGCCTGTTGGAAAGTGGGCTGCCTTTGGGGGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ARAWSEVVTRVRFRV*GLCLLESGLPLGVR Trigger: CCTGACCCCCAAAGGCAGCCCACTTTCCAACAGGCAGAGCCCTCAGACTCTGAAGCGGACCCGGGTGACCACCTCACTCCAGGCTCTAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 ENSMUST00000165957.8 |
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| CDS-3UTR CAA 90 bp | GCCACACAGTCCCACGAGGCGCTCGGGGCTGTCCAGATACTTCTGCTTCTGCCTGAAAGTGGGCTGCCTTaGGGGGTCAGGGGTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ATQSHEALGAVQILLLLPESGLP*GVRGLL Trigger: GAGCAGACCCCTGACCCCCAAAGGCAGCCCACTTTC...AGGCAGAAGCAGAAGTATCTGGACAGCCCCGAGCGCCTCGTGGGACTGTGTGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| CDS TCA 90 bp | ATAATTGAGGGCCATCACCACCTTCAGGTACTCCCGCAGGGTCTCTaGGGCCTTGTTCCAGCGGCCACACAGTCCCACGAGGCGCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: IIEGHHHLQVLPQGL*GLVPAATQSHEALG Trigger: CCCGAGCGCCTCGTGGGACTGTGTGGCCGCTGGAACAAGGCCTCAGAGACCCTGCGGGAGTACCTGAAGGTGGTGATGGCCCTCAATTAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| CDS GCA 90 bp | TGGAGCCTGGAACGGATGACACATGAGGCGTCACGGCAGACTGGGTaGCTCCATCCTCCTCTACAGGCAGGGCCTTGCCACAGTAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: WSLERMTHEASRQTG*LHPPLQAGPCHSKG Trigger: GCCCTTACTGTGGCAAGGCCCTGCCTGTAGAGGAGGATGGAGGCACCCAGTCTGCCGTGACGCCTCATGTGTCATCCGTTCCAGGCTCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002275.15 ENSMUST00000144515.9 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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| CDS TCA 90 bp | GCTCCGGGTGCCTGTGGCCCTGTCAGGAGAAGTCAAGGTGTTGTCTaGCCCAGAACTGTCACAGTCAGAGTGGCGGGAGAGTGGGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: APGACGPVRRSQGVV*PRTVTVRVAGEWER Trigger: TCTCTCCCACTCTCCCGCCACTCTGACTGTGACAGTTCTGGGTCAGACAACACCTTGACTTCTCCTGACAGGGCCACAGGCACCCGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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| CDS CCA 90 bp | AAAGTGGGCTGCCTTTGGGGGTCAGGGGTCTGCTCCGGGTGCCTGTaGCCCTGTCAGGAGAAGTCAAGGTGTTGTCTGACCCAGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: KVGCLWGSGVCSGCL*PCQEKSRCCLTQNC Trigger: ACAGTTCTGGGTCAGACAACACCTTGACTTCTCCTGACAGGGCCACAGGCACCCGGAGCAGACCCCTGACCCCCAAAGGCAGCCCACTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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| CDS CCA 90 bp | CCAGGGTCCAGTGTTTCCCATTCTGGTCTGTCAGCTCTGTTCCTGTaGCTAGAGCCTGGAGTGAGGTGGTCACCCGGGTCCGCTTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: PGSSVSHSGLSALFL*LEPGVRWSPGSASE Trigger: CTCTGAAGCGGACCCGGGTGACCACCTCACTCCAGGCTCTAGCCACAGGAACAGAGCTGACAGACCAGAATGGGAAACACTGGACCCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 ENSMUST00000165957.8 |
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| CDS CCA 90 bp | TCATCCCGGATCTGCAGGGCCCCCAGGGTCCAGTGTTTCCCATTCTaGTCTGTCAGCTCTGTTCCTGTGGCTAGAGCCTGGAGTGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSRICRAPRVQCFPF*SVSSVPVARAWSEV Trigger: CACCTCACTCCAGGCTCTAGCCACAGGAACAGAGCTGACAGACCAGAATGGGAAACACTGGACCCTGGGGGCCCTGCAGATCCGGGATGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 ENSMUST00000165957.8 |
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| CDS TCA 90 bp | AAACTGGAGTTCAGGTCTCTCCTGGAGCCTGGAACGGATGACACATaGGGCGTCACGGCAGACTGGGTGCCTCCATCCTCCTCTACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KLEFRSLLEPGTDDT*GVTADWVPPSSSTG Trigger: GCCTGTAGAGGAGGATGGAGGCACCCAGTCTGCCGTGACGCCTCATGTGTCATCCGTTCCAGGCTCCAGGAGAGACCTGAACTCCAGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002275.15 ENSMUST00000144515.9 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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| CDS TCA 90 bp | GGTTTCAAAACTGGAGTTCAGGTCTCTCCTGGAGCCTGGAACGGATaGCACATGAGGCGTCACGGCAGACTGGGTGCCTCCATCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: GFKTGVQVSPGAWNG*HMRRHGRLGASILL Trigger: GAGGAGGATGGAGGCACCCAGTCTGCCGTGACGCCTCATGTGTCATCCGTTCCAGGCTCCAGGAGAGACCTGAACTCCAGTTTTGAAACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002275.15 ENSMUST00000144515.9 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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| CDS TCA 90 bp | CTAGGCTGTTCCTCAGCGTGGCATAGGGTGGCTTCTCCTCATAATTaGGGGCCATCACCACCTTCAGGTACTCCCGCAGGGTCTCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGCSSAWHRVASPHN*GPSPPSGTPAGSLR Trigger: CCTCAGAGACCCTGCGGGAGTACCTGAAGGTGGTGATGGCCCTCAATTATGAGGAGAAGCCACCCTATGCCACGCTGAGGAACAGCCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| CDS CCA 90 bp | AGGCGCCCATCCTTGGAGTCCAGTTTGAGTGAGAATCTCCACTTCTaGGTCCTTGATTCAGAGGGGACGGCAGAAGTAGGCTCAGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RRPSLESSLSENLHF*VLDSEGTAEVGSAV Trigger: CACAGCTGAGCCTACTTCTGCCGTCCCCTCTGAATCAAGGACCCAGAAGTGGAGATTCTCACTCAAACTGGACTCCAAGGATGGGCGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144515.9 |
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| CDS CCA 90 bp | TCACTTTCTTGGGAGAGGTTTCAAAACTGGAGTTCAGGTCTCTCCTaGAGCCTGGAACGGATGACACATGAGGCGTCACGGCAGACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SLSWERFQNWSSGLS*SLERMTHEASRQTG Trigger: CCCAGTCTGCCGTGACGCCTCATGTGTCATCCGTTCCAGGCTCCAGGAGAGACCTGAACTCCAGTTTTGAAACCTCTCCCAAGAAAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002275.15 ENSMUST00000144515.9 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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| CDS CCA 90 bp | GGAGAAGTCAAGGTGTTGTCTGACCCAGAACTGTCACAGTCAGAGTaGCGGGAGAGTGGGAGAGAAGTGACAGTGTGTGAGCATTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: GEVKVLSDPELSQSE*RESGREVTVCEHFT Trigger: AGTGAAATGCTCACACACTGTCACTTCTCTCCCACTCTCCCGCCACTCTGACTGTGACAGTTCTGGGTCAGACAACACCTTGACTTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002275.15 ENSMUST00000144515.9 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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| CDS-3UTR CAA 90 bp | AGTTTATTATGCCATCACAGAAATGCCATAGGGAGTGGAGTGGCTGCTGCCGCCCTGATACCACATGCTTaGGGTTGTCATCCAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLCHHRNAIGSGVAAAALIPHA*GCHPGL Trigger: CAGCCCTGGATGACAACCCAAAGCATGTGGTATCAG...GGCGGCAGCAGCCACTCCACTCCCTATGGCATTTCTGTGATGGCATAATAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| CDS-3UTR CAA 90 bp | AATGCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCCTCCAGTGAAAGTGGGCTGCCTTaGGGGGTCAGGGGTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: NAHSRDSFRSYEFKQASSESGLP*GVRGLL Trigger: GAGCAGACCCCTGACCCCCAAAGGCAGCCCACTTTC...ACTGGAGGCCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR CAA 90 bp | GTCACACTACTTCATGTTCTACTTCAAGCTGCAAGTCGGAAGCTCTGGATTCCAGAGGGTCCGCATCCCTaGTGCAGGTCCATGCTAATG | + |
|
Preference number: 5 (lower is better) Translates to: VTLLHVLLQAASRKLWIPEGPHP*CRSMLM Trigger: CATTAGCATGGACCTGCACAAGGGATGCGGACCCTC...TGGAATCCAGAGCTTCCGACTTGCAGCTTGAAGTAGAACATGAAGTAGTGTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| CDS-3UTR CAA 90 bp | AGTTTATTATGCCATCACAGAAATGCCATAGGGAGTGGAGTGGCTGCTGCCGCCCTTCCATTTGTTCACTaGCAGAGGCTTGGCTACTCT | + |
|
Preference number: 5 (lower is better) Translates to: SLLCHHRNAIGSGVAAAALPFVH*QRLGYS Trigger: AGAGTAGCCAAGCCTCTGCAAGTGAACAAATGGAAG...GGCGGCAGCAGCCACTCCACTCCCTATGGCATTTCTGTGATGGCATAATAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| CDS TCA 90 bp | AACTGCTTCTTCCATTTGTTCACTTGCAGAGGCTTGGCTACTCTCTaGAAGAAGTTCTGCTCATTGAAAAGGCGCCCATCCTTGGAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NCFFHLFTCRGLATL*KKFCSLKRRPSLES Trigger: GGACTCCAAGGATGGGCGCCTTTTCAATGAGCAGAACTTCTTTCAGAGAGTAGCCAAGCCTCTGCAAGTGAACAAATGGAAGAAGCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000144515.9 |
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| CDS-3UTR CAA 90 bp | GCTGCCAGAGCTGAGACAGGGAGGAGTTTCACATTACATGACATGACTCAGGTTGAGCATTTCACTTTCTaGGGAGAGGTTTCAAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: AARAETGRSFTLHDMTQVEHFTF*GEVSKL Trigger: CAGTTTTGAAACCTCTCCCAAGAAAGTGAAATGCTC...AACCTGAGTCATGTCATGTAATGTGAAACTCCTCCCTGTCTCAGCTCTGGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR CAA 90 bp | GGAGCGGTGAGAATGCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACGGAGAAGTCAAGGTGTaGTCTGACCCAGAACTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GAVRMHIQGILLGAMSSNGEVKV*SDPELS Trigger: TGACAGTTCTGGGTCAGACAACACCTTGACTTCTCC...GTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGCATTCTCACCGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
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| CDS-3UTR CAA 90 bp | AAACAGGCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTGCAAGTCGGAAAAGAAGTTCTGCTCATaGAAAAGGCGCCCATCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: KQASSHTTSCSTSSCKSEKKFCS*KRRPSL Trigger: CAAGGATGGGCGCCTTTTCAATGAGCAGAACTTCTT...TTCCGACTTGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGCCTGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
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| CDS-3UTR CAA 90 bp | GCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCCTCCAGTCACAACTGCTTCTTCCATTaGTTCACTTGCAGAGGCTTG | + |
|
Preference number: 5 (lower is better) Translates to: AHSRDSFRSYEFKQASSHNCFFH*FTCRGL Trigger: CAAGCCTCTGCAAGTGAACAAATGGAAGAAGCAGTT...GTGACTGGAGGCCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS-3UTR CAA 90 bp | AACAGGCCTCCAGTCACACTACTTCATGTTCTACTTCAAGCTGCAAGTCGGAAGGTTATCTTTTCGGTGTaGGGAAGGCAATTTGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: NRPPVTLLHVLLQAASRKVIFSV*GRQFVH Trigger: ATGGACAAATTGCCTTCCCAACACCGAAAAGATAAC...CTTCCGACTTGCAGCTTGAAGTAGAACATGAAGTAGTGTGACTGGAGGCCTGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS-3UTR CAA 90 bp | GCACATTCAAGGGATTCTTTTAGGAGCTATGAGTTCAAACAGGCCTCCAGTCACGAGCATTTCACTTTCTaGGGAGAGGTTTCAAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: AHSRDSFRSYEFKQASSHEHFTF*GEVSKL Trigger: CAGTTTTGAAACCTCTCCCAAGAAAGTGAAATGCTC...GTGACTGGAGGCCTGTTTGAACTCATAGCTCCTAAAAGAATCCCTTGAATGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 |
||
| CDS CAA 90 bp | AGGGCCATCACCACCTTCAGGTACTCCCGCAGGGTCTCTGAGGCCTaGTTCCAGCGGCCACACAGTCCCACGAGGCGCTCGGGGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RAITTFRYSRRVSEA*FQRPHSPTRRSGLS Trigger: GGACAGCCCCGAGCGCCTCGTGGGACTGTGTGGCCGCTGGAACAAGGCCTCAGAGACCCTGCGGGAGTACCTGAAGGTGGTGATGGCCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS CCA 72 bp | TCTGAGGGCTCTGCCTGTTGGAAAGTGGGCTGCCTTTaGGGGTCAGGGGTCTGCTCCGGGTGCCTGTGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SEGSACWKVGCL*GSGVCSGCLWP Trigger: GGGCCACAGGCACCCGGAGCAGACCCCTGACCCCCAAAGGCAGCCCACTTTCCAACAGGCAGAGCCCTCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
||
| CDS CAA 72 bp | ACCACCTTCAGGTACTCCCGCAGGGTCTCTGAGGCCTaGTTCCAGCGGCCACACAGTCCCACGAGGCGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: TTFRYSRRVSEA*FQRPHSPTRRS Trigger: CGAGCGCCTCGTGGGACTGTGTGGCCGCTGGAACAAGGCCTCAGAGACCCTGCGGGAGTACCTGAAGGTGGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS TCA 72 bp | GGCCATCACCACCTTCAGGTACTCCCGCAGGGTCTCTaGGGCCTTGTTCCAGCGGCCACACAGTCCCACGAG | + |
|
Preference number: 6 (lower is better) Translates to: GHHHLQVLPQGL*GLVPAATQSHE Trigger: CTCGTGGGACTGTGTGGCCGCTGGAACAAGGCCTCAGAGACCCTGCGGGAGTACCTGAAGGTGGTGATGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002275.15 |
||
| CDS GCA 72 bp | TCAGAGTCTGAGGGCTCTGCCTGTTGGAAAGTGGGCTaGCTTTGGGGGTCAGGGGTCTGCTCCGGGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SESEGSACWKVG*LWGSGVCSGCL Trigger: CAGGCACCCGGAGCAGACCCCTGACCCCCAAAGGCAGCCCACTTTCCAACAGGCAGAGCCCTCAGACTCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
||
| CDS GCA 72 bp | GAACGGATGACACATGAGGCGTCACGGCAGACTGGGTaGCTCCATCCTCCTCTACAGGCAGGGCCTTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: ERMTHEASRQTG*LHPPLQAGPCH Trigger: GTGGCAAGGCCCTGCCTGTAGAGGAGGATGGAGGCACCCAGTCTGCCGTGACGCCTCATGTGTCATCCGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000002275.15 ENSMUST00000125705.9 ENSMUST00000144515.9 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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| CDS GCA 72 bp | TGTTGGAAAGTGGGCTGCCTTTGGGGGTCAGGGGTCTaGTCCGGGTGCCTGTGGCCCTGTCAGGAGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: CWKVGCLWGSGV*SGCLWPCQEKS Trigger: TGACTTCTCCTGACAGGGCCACAGGCACCCGGAGCAGACCCCTGACCCCCAAAGGCAGCCCACTTTCCAACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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| CDS CAA 90 bp | GGTCTGCTCCGGGTGCCTGTGGCCCTGTCAGGAGAAGTCAAGGTGTaGTCTGACCCAGAACTGTCACAGTCAGAGTGGCGGGAGAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: GLLRVPVALSGEVKV*SDPELSQSEWRESG Trigger: CCCACTCTCCCGCCACTCTGACTGTGACAGTTCTGGGTCAGACAACACCTTGACTTCTCCTGACAGGGCCACAGGCACCCGGAGCAGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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| CDS TCA 72 bp | TTCAGGTCTCTCCTGGAGCCTGGAACGGATGACACATaGGGCGTCACGGCAGACTGGGTGCCTCCATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: FRSLLEPGTDDT*GVTADWVPPSS Trigger: GGAGGATGGAGGCACCCAGTCTGCCGTGACGCCTCATGTGTCATCCGTTCCAGGCTCCAGGAGAGACCTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002275.15 ENSMUST00000144515.9 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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| CDS TCA 72 bp | TGGAGTGAGGTGGTCACCCGGGTCCGCTTCAGAGTCTaGGGGCTCTGCCTGTTGGAAAGTGGGCTGCCTTTG | + |
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Preference number: 6 (lower is better) Translates to: WSEVVTRVRFRV*GLCLLESGLPL Trigger: CAAAGGCAGCCCACTTTCCAACAGGCAGAGCCCTCAGACTCTGAAGCGGACCCGGGTGACCACCTCACTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 ENSMUST00000165957.8 |
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| CDS CAA 72 bp | AGGCGCCCATCCTTGGAGTCCTTCATAGAGAATGCCTaGGTCATCCCGGATCTGCAGGGCCCCCAGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: RRPSLESFIENA*VIPDLQGPQGP Trigger: TGGACCCTGGGGGCCCTGCAGATCCGGGATGACCAAGGCATTCTCTATGAAGGACTCCAAGGATGGGCGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147952.9 |
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| CDS CCA 72 bp | ATCTGCAGGGCCCCCAGGGTCCAGTGTTTCCCATTCTaGTCTGTCAGCTCTGTTCCTGTGGCTAGAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: ICRAPRVQCFPF*SVSSVPVARAW Trigger: CCAGGCTCTAGCCACAGGAACAGAGCTGACAGACCAGAATGGGAAACACTGGACCCTGGGGGCCCTGCAGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 ENSMUST00000165957.8 |
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| CDS CAA 72 bp | CGGGTGCCTGTGGCCCTGTCAGGAGAAGTCAAGGTGTaGTCTGACCCAGAACTGTCACAGTCAGAGTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RVPVALSGEVKV*SDPELSQSEWR Trigger: CCGCCACTCTGACTGTGACAGTTCTGGGTCAGACAACACCTTGACTTCTCCTGACAGGGCCACAGGCACCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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| CDS CAA 72 bp | GACGGCAGAAGTAGGCTCAGCTTCATAGAGAATGCCTaGGTCATCCCGGATCTGCAGGGCCCCCAGGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: DGRSRLSFIENA*VIPDLQGPQGP Trigger: TGGACCCTGGGGGCCCTGCAGATCCGGGATGACCAAGGCATTCTCTATGAAGCTGAGCCTACTTCTGCCGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000165957.8 |
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| CDS CAA 90 bp | TTCAGAGGGGACGGCAGAAGTAGGCTCAGCTTCATAGAGAATGCCTaGGTCATCCCGGATCTGCAGGGCCCCCAGGGTCCAGTGTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: FRGDGRSRLSFIENA*VIPDLQGPQGPVFP Trigger: GGGAAACACTGGACCCTGGGGGCCCTGCAGATCCGGGATGACCAAGGCATTCTCTATGAAGCTGAGCCTACTTCTGCCGTCCCCTCTGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000165957.8 |
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| CDS CAA 90 bp | GCAGAAGTAGGCTCAGCTGTGGCCCTGTCAGGAGAAGTCAAGGTGTaGTCTGACCCAGAACTGTCACAGTCAGAGTGGCGGGAGAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: AEVGSAVALSGEVKV*SDPELSQSEWRESG Trigger: CCCACTCTCCCGCCACTCTGACTGTGACAGTTCTGGGTCAGACAACACCTTGACTTCTCCTGACAGGGCCACAGCTGAGCCTACTTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144515.9 |
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| CDS TCA 72 bp | GCCTGTGGCCCTGTCAGGAGAAGTCAAGGTGTTGTCTaGCCCAGAACTGTCACAGTCAGAGTGGCGGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: ACGPVRRSQGVV*PRTVTVRVAGE Trigger: CTCTCCCGCCACTCTGACTGTGACAGTTCTGGGTCAGACAACACCTTGACTTCTCCTGACAGGGCCACAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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| CDS CCA 72 bp | AGTGTTTCCCATTCTGGTCTGTCAGCTCTGTTCCTGTaGCTAGAGCCTGGAGTGAGGTGGTCACCCGGGTCC | + |
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Preference number: 6 (lower is better) Translates to: SVSHSGLSALFL*LEPGVRWSPGS Trigger: GGACCCGGGTGACCACCTCACTCCAGGCTCTAGCCACAGGAACAGAGCTGACAGACCAGAATGGGAAACACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000002275.15 ENSMUST00000147952.9 ENSMUST00000165957.8 |
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| CDS CAA 72 bp | GGCTCAGCTGTGGCCCTGTCAGGAGAAGTCAAGGTGTaGTCTGACCCAGAACTGTCACAGTCAGAGTGGCGG | + |
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Preference number: 6 (lower is better) Translates to: GSAVALSGEVKV*SDPELSQSEWR Trigger: CCGCCACTCTGACTGTGACAGTTCTGGGTCAGACAACACCTTGACTTCTCCTGACAGGGCCACAGCTGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144515.9 |
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| CDS TCA 72 bp | AGCTGTGGCCCTGTCAGGAGAAGTCAAGGTGTTGTCTaGCCCAGAACTGTCACAGTCAGAGTGGCGGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: SCGPVRRSQGVV*PRTVTVRVAGE Trigger: CTCTCCCGCCACTCTGACTGTGACAGTTCTGGGTCAGACAACACCTTGACTTCTCCTGACAGGGCCACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000144515.9 |
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| CDS CCA 72 bp | TGGGAGAGGTTTCAAAACTGGAGTTCAGGTCTCTCCTaGAGCCTGGAACGGATGACACATGAGGCGTCACGG | + |
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Preference number: 6 (lower is better) Translates to: WERFQNWSSGLS*SLERMTHEASR Trigger: CCGTGACGCCTCATGTGTCATCCGTTCCAGGCTCCAGGAGAGACCTGAACTCCAGTTTTGAAACCTCTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002275.15 ENSMUST00000144515.9 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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| CDS CCA 72 bp | AAGGTGTTGTCTGACCCAGAACTGTCACAGTCAGAGTaGCGGGAGAGTGGGAGAGAAGTGACAGTGTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: KVLSDPELSQSE*RESGREVTVCE Trigger: CTCACACACTGTCACTTCTCTCCCACTCTCCCGCCACTCTGACTGTGACAGTTCTGGGTCAGACAACACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000002275.15 ENSMUST00000144515.9 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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| CDS CCA 72 bp | TCCTTGGAGTCCAGTTTGAGTGAGAATCTCCACTTCTaGGTCCTTGATTCAGAGGGGACGGCAGAAGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: SLESSLSENLHF*VLDSEGTAEVG Trigger: GCCTACTTCTGCCGTCCCCTCTGAATCAAGGACCCAGAAGTGGAGATTCTCACTCAAACTGGACTCCAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002275.15 ENSMUST00000144515.9 ENSMUST00000165957.8 |
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| CDS CAA 90 bp | CGGGAGAGTGGGAGAGAAGTGACAGTGTGTGAGCATTTCACTTTCTaGGGAGAGGTTTCAAAACTGGAGTTCAGGTCTCTCCTGGAGCCT | + |
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Preference number: 6 (lower is better) Translates to: RESGREVTVCEHFTF*GEVSKLEFRSLLEP Trigger: AGGCTCCAGGAGAGACCTGAACTCCAGTTTTGAAACCTCTCCCAAGAAAGTGAAATGCTCACACACTGTCACTTCTCTCCCACTCTCCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002275.15 ENSMUST00000144515.9 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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| CDS CAA 90 bp | AAGAAGTTCTGCTCATTGAAAAGGCGCCCATCCTTGGAGTCCAGTTaGAGTGAGAATCTCCACTTCTGGGTCCTTGATTCAGAGGGGACG | + |
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Preference number: 6 (lower is better) Translates to: KKFCSLKRRPSLESS*SENLHFWVLDSEGT Trigger: CGTCCCCTCTGAATCAAGGACCCAGAAGTGGAGATTCTCACTCAAACTGGACTCCAAGGATGGGCGCCTTTTCAATGAGCAGAACTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000002275.15 ENSMUST00000144515.9 ENSMUST00000165957.8 |
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| CDS CCA 72 bp | GTGAGCATTTCACTTTCTTGGGAGAGGTTTCAAAACTaGAGTTCAGGTCTCTCCTGGAGCCTGGAACGGATG | + |
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Preference number: 6 (lower is better) Translates to: VSISLSWERFQN*SSGLSWSLERM Trigger: CATCCGTTCCAGGCTCCAGGAGAGACCTGAACTCCAGTTTTGAAACCTCTCCCAAGAAAGTGAAATGCTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002275.15 ENSMUST00000144515.9 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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| CDS CAA 72 bp | TGCTCATTGAAAAGGCGCCCATCCTTGGAGTCCAGTTaGAGTGAGAATCTCCACTTCTGGGTCCTTGATTCA | + |
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Preference number: 6 (lower is better) Translates to: CSLKRRPSLESS*SENLHFWVLDS Trigger: TGAATCAAGGACCCAGAAGTGGAGATTCTCACTCAAACTGGACTCCAAGGATGGGCGCCTTTTCAATGAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000002275.15 ENSMUST00000144515.9 ENSMUST00000165957.8 |
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| CDS TCA 72 bp | TTCCATTTGTTCACTTGCAGAGGCTTGGCTACTCTCTaGAAGAAGTTCTGCTCATTGAAAAGGCGCCCATCC | + |
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Preference number: 6 (lower is better) Translates to: FHLFTCRGLATL*KKFCSLKRRPS Trigger: GGATGGGCGCCTTTTCAATGAGCAGAACTTCTTTCAGAGAGTAGCCAAGCCTCTGCAAGTGAACAAATGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002275.15 ENSMUST00000144515.9 |
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| CDS CAA 72 bp | GGGAGAGAAGTGACAGTGTGTGAGCATTTCACTTTCTaGGGAGAGGTTTCAAAACTGGAGTTCAGGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: GREVTVCEHFTF*GEVSKLEFRSL Trigger: GAGAGACCTGAACTCCAGTTTTGAAACCTCTCCCAAGAAAGTGAAATGCTCACACACTGTCACTTCTCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000002275.15 ENSMUST00000144515.9 ENSMUST00000147952.9 ENSMUST00000165957.8 ENSMUST00000171821.8 |
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