Pregenerated sensors for VRK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021115Ensembl transcript IDs: ENSMUST00000021539.16, ENSMUST00000072040.7, ENSMUST00000085026.12, ENSMUST00000220629.2, ENSMUST00000221312.2, ENSMUST00000221485.2
Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCATGGAACTGCAAAGGGCAGAAATCAGCAACAACTGTGGGCGCTaGCGCGGCTGGCCCAGGAAGAACCACGCTCCCTCCGTAGGGACT | + |
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Preference number: 1 (lower is better) Translates to: LMELQRAEISNNCGR*RGWPRKNHAPSVGT Trigger: AGTCCCTACGGAGGGAGCGTGGTTCTTCCTGGGCCAGCCGCGGCAGCGCCCACAGTTGTTGCTGATTTCTGCCCTTTGCAGTTCCATGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR TCA 90 bp | TGCTGCCTCCTGGAACTGTCAGAGCTGCTGCAGCCCGCCGCTGGCTaGGACATGCTTCCATGTATTGCTCCTTGGGACTCCACACTTCCT | + |
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Preference number: 1 (lower is better) Translates to: CCLLELSELLQPAAG*DMLPCIAPWDSTLP Trigger: AGGAAGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCAGCAGCTCTGACAGTTCCAGGAGGCAGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR CCA 90 bp | ATGCTGCTGCCTCCTGGAACTGTCAGAGCTGCTGCAGCCCGCCGCTaGCTGAGACATGCTTCCATGTATTGCTCCTTGGGACTCCACACT | + |
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Preference number: 1 (lower is better) Translates to: MLLPPGTVRAAAARR*LRHASMYCSLGLHT Trigger: AGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCAGCAGCTCTGACAGTTCCAGGAGGCAGCAGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR GCA 90 bp | CCACCGCCATCGGAGAACATGGAGAGCTGGGCTGCTGGTTACCATTaGTGGACCCTGTGCCTGACAGAAGAGTCAGAGCACATCAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: PPPSENMESWAAGYH*WTLCLTEESEHIRS Trigger: TGACCTGATGTGCTCTGACTCTTCTGTCAGGCACAGGGTCCAGCAATGGTAACCAGCAGCCCAGCTCTCCATGTTCTCCGATGGCGGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR GCA 90 bp | GAACCCCTACGGTCTAGCCTTAGCATGTCTTGTTCCAATCCCAAATaGTGCTGCCTCCTGGAACTGTCAGAGCTGCTGCAGCCCGCCGCT | + |
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Preference number: 1 (lower is better) Translates to: EPLRSSLSMSCSNPK*CCLLELSELLQPAA Trigger: AGCGGCGGGCTGCAGCAGCTCTGACAGTTCCAGGAGGCAGCAGCATTTGGGATTGGAACAAGACATGCTAAGGCTAGACCGTAGGGGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR TCA 90 bp | ACATGGAGAGCTGGGCTGCTGGTTACCATTGCTGGACCCTGTGCCTaGCAGAAGAGTCAGAGCACATCAGGTCAGGAAGGGCACCACCAT | + |
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Preference number: 1 (lower is better) Translates to: TWRAGLLVTIAGPCA*QKSQSTSGQEGHHH Trigger: ATGGTGGTGCCCTTCCTGACCTGATGTGCTCTGACTCTTCTGTCAGGCACAGGGTCCAGCAATGGTAACCAGCAGCCCAGCTCTCCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR TCA 90 bp | CGGCCTGAGAGGCAGCTCTGGTTTCTACCTCCCAAACCCCTGTCCTaGCTGCTGTGGAGAGCAAGTGACAGAAAGCGTGTACGGAAGACA | + |
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Preference number: 1 (lower is better) Translates to: RPERQLWFLPPKPLS*LLWRASDRKRVRKT Trigger: TGTCTTCCGTACACGCTTTCTGTCACTTGCTCTCCACAGCAGTCAGGACAGGGGTTTGGGAGGTAGAAACCAGAGCTGCCTCTCAGGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR GCA 90 bp | TCCTGGAACTGTCAGAGCTGCTGCAGCCCGCCGCTGGCTGAGACATaGTTCCATGTATTGCTCCTTGGGACTCCACACTTCCTAATAACA | + |
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Preference number: 1 (lower is better) Translates to: SWNCQSCCSPPLAET*FHVLLLGTPHFLIT Trigger: TGTTATTAGGAAGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCAGCAGCTCTGACAGTTCCAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR GCA 90 bp | AAGCACACTCGCTCAGGAACTGGCAAGAAGATAAACTCATGGAACTaGAAAGGGCAGAAATCAGCAACAACTGTGGGCGCTGCCGCGGCT | + |
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Preference number: 1 (lower is better) Translates to: KHTRSGTGKKINSWN*KGQKSATTVGAAAA Trigger: AGCCGCGGCAGCGCCCACAGTTGTTGCTGATTTCTGCCCTTTGCAGTTCCATGAGTTTATCTTCTTGCCAGTTCCTGAGCGAGTGTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR CCA 90 bp | AAGGGCACCCTGCCGCTTCTCATCCTTGCTTCTGACTTTAGACTGTaGGGCTGCTCTCAGACAGGCCATACCTTACTGTGCTCTTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: KGTLPLLILASDFRL*GCSQTGHTLLCSFF Trigger: GAAGAAAGAGCACAGTAAGGTATGGCCTGTCTGAGAGCAGCCCCACAGTCTAAAGTCAGAAGCAAGGATGAGAAGCGGCAGGGTGCCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR TCA 90 bp | GTTTCTACCTCCCAAACCCCTGTCCTGACTGCTGTGGAGAGCAAGTaGCAGAAAGCGTGTACGGAAGACACCCCTATACGTACTACGCAA | + |
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Preference number: 1 (lower is better) Translates to: VSTSQTPVLTAVESK*QKACTEDTPIRTTQ Trigger: TTGCGTAGTACGTATAGGGGTGTCTTCCGTACACGCTTTCTGTCACTTGCTCTCCACAGCAGTCAGGACAGGGGTTTGGGAGGTAGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR TCA 90 bp | ACTCTACAGCTTATGTACCCGGGCACACGGAGACAAAGGGCACACTaGGGCCATGCTATGCAACTTCAGTCTATATGGGCACAGCTAACT | + |
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Preference number: 1 (lower is better) Translates to: TLQLMYPGTRRQRAH*GHAMQLQSIWAQLT Trigger: AGTTAGCTGTGCCCATATAGACTGAAGTTGCATAGCATGGCCTCAGTGTGCCCTTTGTCTCCGTGTGCCCGGGTACATAAGCTGTAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR GCA 90 bp | ACCCTGCCGCTTCTCATCCTTGCTTCTGACTTTAGACTGTGGGGCTaGTCTCAGACAGGCCATACCTTACTGTGCTCTTTCTTCCTTAGT | + |
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Preference number: 1 (lower is better) Translates to: TLPLLILASDFRLWG*SQTGHTLLCSFFLS Trigger: ACTAAGGAAGAAAGAGCACAGTAAGGTATGGCCTGTCTGAGAGCAGCCCCACAGTCTAAAGTCAGAAGCAAGGATGAGAAGCGGCAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR GCA 90 bp | TCTAGTGTGAGGTGTGAGCCTGCAATATCTCCAGGTAGTGCAAGGTaGACAGCTGTAACCCCTGTAGCTAATATGGGGTGCACAGCTATC | + |
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Preference number: 1 (lower is better) Translates to: SSVRCEPAISPGSAR*TAVTPVANMGCTAI Trigger: GATAGCTGTGCACCCCATATTAGCTACAGGGGTTACAGCTGTGCACCTTGCACTACCTGGAGATATTGCAGGCTCACACCTCACACTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR GCA 90 bp | CACGTGATGACTCAACAGTCCACGGGCGGAGCCAGTCACAGTTGCTaGTCCTGTCCATCACACAATGGTTTACACAGAACTGTCTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: HVMTQQSTGGASHSC*SCPSHNGLHRTVFK Trigger: TTTGAAGACAGTTCTGTGTAAACCATTGTGTGATGGACAGGAGCAGCAACTGTGACTGGCTCCGCCCGTGGACTGTTGAGTCATCACGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR CCA 90 bp | AACATGCACCAGGACCAGTGTCAACAGAAAGGCAAACTACCGTGCTaGCCTCTGTCACTAAAGCATTTATGCTACTGTGGCCTTCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: NMHQDQCQQKGKLPC*PLSLKHLCYCGLLA Trigger: GGCAAGAAGGCCACAGTAGCATAAATGCTTTAGTGACAGAGGCCAGCACGGTAGTTTGCCTTTCTGTTGACACTGGTCCTGGTGCATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR GCA 90 bp | GACTTTAGACTGTGGGGCTGCTCTCAGACAGGCCATACCTTACTGTaGTCTTTCTTCCTTAGTGCACACAGCACGCATTCAATAAACGCT | + |
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Preference number: 1 (lower is better) Translates to: DFRLWGCSQTGHTLL*SFFLSAHSTHSINA Trigger: AGCGTTTATTGAATGCGTGCTGTGTGCACTAAGGAAGAAAGAGCACAGTAAGGTATGGCCTGTCTGAGAGCAGCCCCACAGTCTAAAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR CCA 90 bp | CTGTCCAGTCTGGGAATCGCACAGCAGCCTGAGCCCCAGACCACATaGGTTATGACGACTAAAGATTCAGAATTTTATAAATTACCCTTC | + |
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Preference number: 1 (lower is better) Translates to: LSSLGIAQQPEPQTT*VMTTKDSEFYKLPF Trigger: GAAGGGTAATTTATAAAATTCTGAATCTTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAGACTGGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| 3UTR GCA 90 bp | AAAACACAATACACACGGTGCCAGCAGCCAACTTGCTTACCCATTTaGCCAACCCTGATTGCTCTAAGAGTAATTTTTGAGGAAGGTCTC | + |
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Preference number: 1 (lower is better) Translates to: KTQYTRCQQPTCLPI*PTLIALRVIFEEGL Trigger: GAGACCTTCCTCAAAAATTACTCTTAGAGCAATCAGGGTTGGGCAAATGGGTAAGCAAGTTGGCTGCTGGCACCGTGTGTATTGTGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR TCA 90 bp | GTCTGGGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATaGCGACTAAAGATTCAGAATTTTATAAATTACCCTTCAGTAAAG | + |
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Preference number: 1 (lower is better) Translates to: VWESHSSLSPRPHGL*RLKIQNFINYPSVK Trigger: CTTTACTGAAGGGTAATTTATAAAATTCTGAATCTTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| 3UTR CAA 90 bp | ACCACCGCCATCGGAGAACATGGAGAGCTGGGCTGCTGGTTACCATaGCTGGACCCTGTGCCTGACAGAAGAGTCAGAGCACATCAGGTC | + |
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Preference number: 2 (lower is better) Translates to: TTAIGEHGELGCWLP*LDPVPDRRVRAHQV Trigger: GACCTGATGTGCTCTGACTCTTCTGTCAGGCACAGGGTCCAGCAATGGTAACCAGCAGCCCAGCTCTCCATGTTCTCCGATGGCGGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR-3UTR CCA 90 bp | CATAGCCGCAATCCCTCAGCTACTGCCTTTGGGAGGCAGACACAGGCAGGCCAGTCTGACTTTAGACTGTaGGGCTGCTCTCAGACAGGC | + |
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Preference number: 2 (lower is better) Translates to: HSRNPSATAFGRQTQAGQSDFRL*GCSQTG Trigger: GCCTGTCTGAGAGCAGCCCCACAGTCTAAAGTCAGA...CTGGCCTGCCTGTGTCTGCCTCCCAAAGGCAGTAGCTGAGGGATTGCGGCTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR-3UTR GCA 90 bp | AAAACCGCTGGGTCCAAGAGAGCAGTGTCTGGGAAGCCGACACAGCAGGGCATGAACCCCTGTCCTGACTaGTGTGGAGAGCAAGTGACA | + |
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Preference number: 2 (lower is better) Translates to: KTAGSKRAVSGKPTQQGMNPCPD*CGEQVT Trigger: TGTCACTTGCTCTCCACAGCAGTCAGGACAGGGGTT...CATGCCCTGCTGTGTCGGCTTCCCAGACACTGCTCTCTTGGACCCAGCGGTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR-3UTR CCA 90 bp | CCGCCGCTGGCTGAGACATGCTTCCATGTATTGCTCCTTGGGACTCCACACTTCCCTGAGAGGCAGCTCTaGTTTCTACCTCCCAAACCC | + |
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Preference number: 2 (lower is better) Translates to: PPLAETCFHVLLLGTPHFPERQL*FLPPKP Trigger: GGGTTTGGGAGGTAGAAACCAGAGCTGCCTCTCAGG...GAAGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR-3UTR GCA 90 bp | GTCCTAGGCCGTGTGAGGTATATTCTGAACACACCACGGCTGCCCAAAAACACAAAGTGGGGGAGGCTCTaGCCCCTACTGACAGGACTC | + |
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Preference number: 2 (lower is better) Translates to: VLGRVRYILNTPRLPKNTKWGRL*PLLTGL Trigger: GAGTCCTGTCAGTAGGGGGCAGAGCCTCCCCCACTT...TGTGTTTTTGGGCAGCCGTGGTGTGTTCAGAATATACCTCACACGGCCTAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR-3UTR TCA 90 bp | GTGAACCCCTACGGTCTAGCCTTAGCATGTCTTGTTCCAATCCCAAATGCTGCTGAAATCCACTGCAGCTaGGTGTGCAGCCCCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: VNPYGLALACLVPIPNAAEIHCS*VCSPHH Trigger: GTGGTGGGGGCTGCACACTCAGCTGCAGTGGATTTC...AGCAGCATTTGGGATTGGAACAAGACATGCTAAGGCTAGACCGTAGGGGTTCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAACCCCTACGGTCTAGCCTTAGCATGTCTTGTTCCAATCCCAAATGCTGCTCCCAAACCCCTGTCCTaGCTGCTGTGGAGAGCAAGT | + |
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Preference number: 2 (lower is better) Translates to: VNPYGLALACLVPIPNAAPKPLS*LLWRAS Trigger: ACTTGCTCTCCACAGCAGTCAGGACAGGGGTTTGGG...AGCAGCATTTGGGATTGGAACAAGACATGCTAAGGCTAGACCGTAGGGGTTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGAATCGCACAGCAGCCTaGGCCCCAGACCACATGGGT | + |
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Preference number: 2 (lower is better) Translates to: RDLKVLHSLKARSLLSTLNRTAA*APDHMG Trigger: ACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATT...CAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGAATCTCGTTTACTTCTGGGCTTTCTTTCTGGTTCGTGAACCCCTACGGAATGCTGCTGCCTCCTaGAACTGTCAGAGCTGCTGC | + |
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Preference number: 2 (lower is better) Translates to: SWNLVYFWAFFLVREPLRNAAAS*NCQSCC Trigger: GCAGCAGCTCTGACAGTTCCAGGAGGCAGCAGCATT...CCGTAGGGGTTCACGAACCAGAAAGAAAGCCCAGAAGTAAACGAGATTCCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCGGAGCCAGTCACAGTTGCTGCTCCTGTCCATCACACAATGGTTTACACAGGGCCATACCTTACTGTaGTCTTTCTTCCTTAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: GRSQSQLLLLSITQWFTQGHTLL*SFFLSA Trigger: TGCACTAAGGAAGAAAGAGCACAGTAAGGTATGGCC...CTGTGTAAACCATTGTGTGATGGACAGGAGCAGCAACTGTGACTGGCTCCGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR-3UTR TCA 90 bp | ACATCGAGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGAATCGCACAGCAGCCTaGGCCCCAGACCACATGGGT | + |
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Preference number: 2 (lower is better) Translates to: TSSKRDLKVLHSLKARSLNRTAA*APDHMG Trigger: ACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATT...CAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCTCGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| 3UTR-3UTR CCA 90 bp | AAAACAAAAATACAATACTCTACAGCTTATGTACCCGGGCACACGGAGACAAAGGCACTCTGTCCAGTCTaGGAATCGCACAGCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: KTKIQYSTAYVPGHTETKALCPV*ESHSSL Trigger: CAGGCTGCTGTGCGATTCCCAGACTGGACAGAGTGC...CTTTGTCTCCGTGTGCCCGGGTACATAAGCTGTAGAGTATTGTATTTTTGTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR-3UTR CCA 90 bp | TACATCGAGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCACTCTGTCCAGTCTaGGAATCGCACAGCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: YIEQKRPKGSSFLKSKEPALCPV*ESHSSL Trigger: CAGGCTGCTGTGCGATTCCCAGACTGGACAGAGTGC...AGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCTCGATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| 3UTR-3UTR CCA 90 bp | GTGAACCCCTACGGTCTAGCCTTAGCATGTCTTGTTCCAATCCCAAATGCTGCTGCATTTATGCTACTGTaGCCTTCTTGCCCAAAACGA | + |
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Preference number: 2 (lower is better) Translates to: VNPYGLALACLVPIPNAAAFMLL*PSCPKR Trigger: TCGTTTTGGGCAAGAAGGCCACAGTAGCATAAATGC...AGCAGCATTTGGGATTGGAACAAGACATGCTAAGGCTAGACCGTAGGGGTTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR-3UTR TCA 90 bp | TTATGCTACTGTGGCCTTCTTGCCCAAAACGAGGCTATTCATCAGAAATTAAGAGCTGTGGAGAGCAAGTaGCAGAAAGCGTGTACGGAA | + |
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Preference number: 2 (lower is better) Translates to: LCYCGLLAQNEAIHQKLRAVESK*QKACTE Trigger: TTCCGTACACGCTTTCTGTCACTTGCTCTCCACAGC...TCTTAATTTCTGATGAATAGCCTCGTTTTGGGCAAGAAGGCCACAGTAGCATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR GCA 72 bp | CTGCAAAGGGCAGAAATCAGCAACAACTGTGGGCGCTaGCGCGGCTGGCCCAGGAAGAACCACGCTCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: LQRAEISNNCGR*RGWPRKNHAPS Trigger: GGAGGGAGCGTGGTTCTTCCTGGGCCAGCCGCGGCAGCGCCCACAGTTGTTGCTGATTTCTGCCCTTTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR TCA 72 bp | CCACCACCGGGAGAGGTGGGAAGCATCCTTCCGGCCTaGGAGGCAGCTCTGGTTTCTACCTCCCAAACCCCT | + |
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Preference number: 3 (lower is better) Translates to: PPPGEVGSILPA*EAALVSTSQTP Trigger: AGGGGTTTGGGAGGTAGAAACCAGAGCTGCCTCTCAGGCCGGAAGGATGCTTCCCACCTCTCCCGGTGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR CCA 72 bp | CCACGGGAAGTCTGGGACGCTGAGAAAAGTAGCCTCTaGGGCCACAGCGCAGCTCGATCCGCTTCTGACTGC | + |
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Preference number: 3 (lower is better) Translates to: PREVWDAEKSSL*GHSAARSASDC Trigger: GCAGTCAGAAGCGGATCGAGCTGCGCTGTGGCCCCAGAGGCTACTTTTCTCAGCGTCCCAGACTTCCCGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR CCA 72 bp | CATGGAACTGCAAAGGGCAGAAATCAGCAACAACTGTaGGCGCTGCCGCGGCTGGCCCAGGAAGAACCACGC | + |
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Preference number: 3 (lower is better) Translates to: HGTAKGRNQQQL*ALPRLAQEEPR Trigger: GCGTGGTTCTTCCTGGGCCAGCCGCGGCAGCGCCCACAGTTGTTGCTGATTTCTGCCCTTTGCAGTTCCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR TCA 72 bp | CTGGAACTGTCAGAGCTGCTGCAGCCCGCCGCTGGCTaGGACATGCTTCCATGTATTGCTCCTTGGGACTCC | + |
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Preference number: 3 (lower is better) Translates to: LELSELLQPAAG*DMLPCIAPWDS Trigger: GGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCAGCAGCTCTGACAGTTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR GCA 72 bp | CCAAATGCTGCTGCCTCCTGGAACTGTCAGAGCTGCTaGAGCCCGCCGCTGGCTGAGACATGCTTCCATGTA | + |
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Preference number: 3 (lower is better) Translates to: PNAAASWNCQSC*SPPLAETCFHV Trigger: TACATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCAGCAGCTCTGACAGTTCCAGGAGGCAGCAGCATTTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR GCA 72 bp | ATCCCAAATGCTGCTGCCTCCTGGAACTGTCAGAGCTaGTGCAGCCCGCCGCTGGCTGAGACATGCTTCCAT | + |
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Preference number: 3 (lower is better) Translates to: IPNAAASWNCQS*CSPPLAETCFH Trigger: ATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCAGCAGCTCTGACAGTTCCAGGAGGCAGCAGCATTTGGGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR CCA 72 bp | CCTCCTGGAACTGTCAGAGCTGCTGCAGCCCGCCGCTaGCTGAGACATGCTTCCATGTATTGCTCCTTGGGA | + |
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Preference number: 3 (lower is better) Translates to: PPGTVRAAAARR*LRHASMYCSLG Trigger: TCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCAGCAGCTCTGACAGTTCCAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR CCA 72 bp | GCATGTCTTGTTCCAATCCCAAATGCTGCTGCCTCCTaGAACTGTCAGAGCTGCTGCAGCCCGCCGCTGGCT | + |
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Preference number: 3 (lower is better) Translates to: ACLVPIPNAAAS*NCQSCCSPPLA Trigger: AGCCAGCGGCGGGCTGCAGCAGCTCTGACAGTTCCAGGAGGCAGCAGCATTTGGGATTGGAACAAGACATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR TCA 72 bp | GCTGGGCTGCTGGTTACCATTGCTGGACCCTGTGCCTaGCAGAAGAGTCAGAGCACATCAGGTCAGGAAGGG | + |
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Preference number: 3 (lower is better) Translates to: AGLLVTIAGPCA*QKSQSTSGQEG Trigger: CCCTTCCTGACCTGATGTGCTCTGACTCTTCTGTCAGGCACAGGGTCCAGCAATGGTAACCAGCAGCCCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| 3UTR GCA 72 bp | TGTCAGAGCTGCTGCAGCCCGCCGCTGGCTGAGACATaGTTCCATGTATTGCTCCTTGGGACTCCACACTTC | + |
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Preference number: 3 (lower is better) Translates to: CQSCCSPPLAET*FHVLLLGTPHF Trigger: GAAGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCAGCAGCTCTGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| 3UTR CCA 72 bp | ACCACCGCCATCGGAGAACATGGAGAGCTGGGCTGCTaGTTACCATTGCTGGACCCTGTGCCTGACAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TTAIGEHGELGC*LPLLDPVPDRR Trigger: TCTTCTGTCAGGCACAGGGTCCAGCAATGGTAACCAGCAGCCCAGCTCTCCATGTTCTCCGATGGCGGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| 3UTR CCA 72 bp | CTTAAGAAACCACCGCCATCGGAGAACATGGAGAGCTaGGCTGCTGGTTACCATTGCTGGACCCTGTGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LKKPPPSENMES*AAGYHCWTLCL Trigger: CAGGCACAGGGTCCAGCAATGGTAACCAGCAGCCCAGCTCTCCATGTTCTCCGATGGCGGTGGTTTCTTAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| 3UTR CCA 72 bp | GGTGTTGTCTTAAGAAACCACCGCCATCGGAGAACATaGAGAGCTGGGCTGCTGGTTACCATTGCTGGACCC | + |
|
Preference number: 3 (lower is better) Translates to: GVVLRNHRHRRT*RAGLLVTIAGP Trigger: GGGTCCAGCAATGGTAACCAGCAGCCCAGCTCTCCATGTTCTCCGATGGCGGTGGTTTCTTAAGACAACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| 3UTR TCA 72 bp | TCCCAAACCCCTGTCCTGACTGCTGTGGAGAGCAAGTaGCAGAAAGCGTGTACGGAAGACACCCCTATACGT | + |
|
Preference number: 3 (lower is better) Translates to: SQTPVLTAVESK*QKACTEDTPIR Trigger: ACGTATAGGGGTGTCTTCCGTACACGCTTTCTGTCACTTGCTCTCCACAGCAGTCAGGACAGGGGTTTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| 3UTR TCA 72 bp | AGGCAGCTCTGGTTTCTACCTCCCAAACCCCTGTCCTaGCTGCTGTGGAGAGCAAGTGACAGAAAGCGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: RQLWFLPPKPLS*LLWRASDRKRV Trigger: TACACGCTTTCTGTCACTTGCTCTCCACAGCAGTCAGGACAGGGGTTTGGGAGGTAGAAACCAGAGCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| 3UTR GCA 72 bp | AGCTCTGGTTTCTACCTCCCAAACCCCTGTCCTGACTaGTGTGGAGAGCAAGTGACAGAAAGCGTGTACGGA | + |
|
Preference number: 3 (lower is better) Translates to: SSGFYLPNPCPD*CGEQVTESVYG Trigger: TCCGTACACGCTTTCTGTCACTTGCTCTCCACAGCAGTCAGGACAGGGGTTTGGGAGGTAGAAACCAGAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| 3UTR GCA 72 bp | TCTAGCCTTAGCATGTCTTGTTCCAATCCCAAATGCTaGTGCCTCCTGGAACTGTCAGAGCTGCTGCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SSLSMSCSNPKC*CLLELSELLQP Trigger: GGGCTGCAGCAGCTCTGACAGTTCCAGGAGGCAGCAGCATTTGGGATTGGAACAAGACATGCTAAGGCTAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| 3UTR GCA 72 bp | CGGTCTAGCCTTAGCATGTCTTGTTCCAATCCCAAATaGTGCTGCCTCCTGGAACTGTCAGAGCTGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RSSLSMSCSNPK*CCLLELSELLQ Trigger: CTGCAGCAGCTCTGACAGTTCCAGGAGGCAGCAGCATTTGGGATTGGAACAAGACATGCTAAGGCTAGACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| 3UTR CCA 72 bp | CTGCCGCTTCTCATCCTTGCTTCTGACTTTAGACTGTaGGGCTGCTCTCAGACAGGCCATACCTTACTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LPLLILASDFRL*GCSQTGHTLLC Trigger: GCACAGTAAGGTATGGCCTGTCTGAGAGCAGCCCCACAGTCTAAAGTCAGAAGCAAGGATGAGAAGCGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| 3UTR CCA 72 bp | TCTTTTAAAAACCGCTGGGTCCAAGAGAGCAGTGTCTaGGAAGCCGACACAGCAGGGCATGTCCAGTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: SFKNRWVQESSV*EADTAGHVQSQ Trigger: CTGAGACTGGACATGCCCTGCTGTGTCGGCTTCCCAGACACTGCTCTCTTGGACCCAGCGGTTTTTAAAAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| 3UTR TCA 72 bp | CTTATGTACCCGGGCACACGGAGACAAAGGGCACACTaGGGCCATGCTATGCAACTTCAGTCTATATGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: LMYPGTRRQRAH*GHAMQLQSIWA Trigger: TGCCCATATAGACTGAAGTTGCATAGCATGGCCTCAGTGTGCCCTTTGTCTCCGTGTGCCCGGGTACATAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| 3UTR GCA 72 bp | CTGTGGGGCTGCTCTCAGACAGGCCATACCTTACTGTaGTCTTTCTTCCTTAGTGCACACAGCACGCATTCA | + |
|
Preference number: 3 (lower is better) Translates to: LWGCSQTGHTLL*SFFLSAHSTHS Trigger: TGAATGCGTGCTGTGTGCACTAAGGAAGAAAGAGCACAGTAAGGTATGGCCTGTCTGAGAGCAGCCCCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| 3UTR GCA 72 bp | AGGTGTGAGCCTGCAATATCTCCAGGTAGTGCAAGGTaGACAGCTGTAACCCCTGTAGCTAATATGGGGTGC | + |
|
Preference number: 3 (lower is better) Translates to: RCEPAISPGSAR*TAVTPVANMGC Trigger: GCACCCCATATTAGCTACAGGGGTTACAGCTGTGCACCTTGCACTACCTGGAGATATTGCAGGCTCACACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| 3UTR GCA 72 bp | ACTCAACAGTCCACGGGCGGAGCCAGTCACAGTTGCTaGTCCTGTCCATCACACAATGGTTTACACAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: TQQSTGGASHSC*SCPSHNGLHRT Trigger: AGTTCTGTGTAAACCATTGTGTGATGGACAGGAGCAGCAACTGTGACTGGCTCCGCCCGTGGACTGTTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| 3UTR TCA 72 bp | GATCTTTACTTCCGCATCACTACTCGCTTTCAACAGTaGCTCCTCCCCTTCCTAACTGGCTGGGACGAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: DLYFRITTRFQQ*LLPFLTGWDEL Trigger: TAGCTCGTCCCAGCCAGTTAGGAAGGGGAGGAGTCACTGTTGAAAGCGAGTAGTGATGCGGAAGTAAAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| 3UTR TCA 72 bp | TGCCTTTGGGAGGCAGACACAGGCAGGCCAGGAGTTTaGGAACACTTGGTCTATACAAGTCAGACTGAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: CLWEADTGRPGV*EHLVYTSQTEK Trigger: TTTCTCAGTCTGACTTGTATAGACCAAGTGTTCTCAAACTCCTGGCCTGCCTGTGTCTGCCTCCCAAAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| 3UTR GCA 72 bp | CTTCTCATCCTTGCTTCTGACTTTAGACTGTGGGGCTaGTCTCAGACAGGCCATACCTTACTGTGCTCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LLILASDFRLWG*SQTGHTLLCSF Trigger: GAAAGAGCACAGTAAGGTATGGCCTGTCTGAGAGCAGCCCCACAGTCTAAAGTCAGAAGCAAGGATGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| 3UTR CCA 72 bp | CAGGACCAGTGTCAACAGAAAGGCAAACTACCGTGCTaGCCTCTGTCACTAAAGCATTTATGCTACTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QDQCQQKGKLPC*PLSLKHLCYCG Trigger: GCCACAGTAGCATAAATGCTTTAGTGACAGAGGCCAGCACGGTAGTTTGCCTTTCTGTTGACACTGGTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| 3UTR GCA 72 bp | CACCAGGACCAGTGTCAACAGAAAGGCAAACTACCGTaGTGGCCTCTGTCACTAAAGCATTTATGCTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: HQDQCQQKGKLP*WPLSLKHLCYC Trigger: ACAGTAGCATAAATGCTTTAGTGACAGAGGCCAGCACGGTAGTTTGCCTTTCTGTTGACACTGGTCCTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| 3UTR CCA 72 bp | GTTCCTGGAATCTCGTTTACTTCTGGGCTTTCTTTCTaGTTCGTGAACCCCTACGGTCTAGCCTTAGCATGT | + |
|
Preference number: 3 (lower is better) Translates to: VPGISFTSGLSF*FVNPYGLALAC Trigger: ACATGCTAAGGCTAGACCGTAGGGGTTCACGAACCAGAAAGAAAGCCCAGAAGTAAACGAGATTCCAGGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| 3UTR GCA 72 bp | TACACACGGTGCCAGCAGCCAACTTGCTTACCCATTTaGCCAACCCTGATTGCTCTAAGAGTAATTTTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: YTRCQQPTCLPI*PTLIALRVIFE Trigger: CTCAAAAATTACTCTTAGAGCAATCAGGGTTGGGCAAATGGGTAAGCAAGTTGGCTGCTGGCACCGTGTGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| 3UTR CCA 72 bp | AGCCAGTCACAGTTGCTGCTCCTGTCCATCACACAATaGTTTACACAGAACTGTCTTCAAAGCAACCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SQSQLLLLSITQ*FTQNCLQSNQS Trigger: AGACTGGTTGCTTTGAAGACAGTTCTGTGTAAACCATTGTGTGATGGACAGGAGCAGCAACTGTGACTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| 3UTR CCA 72 bp | GTGCTGGCCTCTGTCACTAAAGCATTTATGCTACTGTaGCCTTCTTGCCCAAAACGAGGCTATTCATCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: VLASVTKAFMLL*PSCPKRGYSSE Trigger: TTCTGATGAATAGCCTCGTTTTGGGCAAGAAGGCCACAGTAGCATAAATGCTTTAGTGACAGAGGCCAGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| 3UTR CCA 72 bp | CTGGGAATCGCACAGCAGCCTGAGCCCCAGACCACATaGGTTATGACGACTAAAGATTCAGAATTTTATAAA | + |
|
Preference number: 3 (lower is better) Translates to: LGIAQQPEPQTT*VMTTKDSEFYK Trigger: TTTATAAAATTCTGAATCTTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| 3UTR TCA 72 bp | TCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATaGCGACTAAAGATTCAGAATTTTATAAATTACCCT | + |
|
Preference number: 3 (lower is better) Translates to: SHSSLSPRPHGL*RLKIQNFINYP Trigger: AGGGTAATTTATAAAATTCTGAATCTTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| 3UTR CCA 72 bp | AACTTGGGAGTTGATTTTAGGTGTCACAAATACACTTaGGACCAACCGACACACTACTCTGTACTACAACCC | + |
|
Preference number: 3 (lower is better) Translates to: NLGVDFRCHKYT*DQPTHYSVLQP Trigger: GGGTTGTAGTACAGAGTAGTGTGTCGGTTGGTCCCAAGTGTATTTGTGACACCTAAAATCAACTCCCAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| 3UTR GCA 72 bp | AAAAGGTGGCTGTCTTCCAAAATTTGCTTTCTAACATaGACCAGGACCAGTGTCAACAGAAAGGCAAACTAC | + |
|
Preference number: 3 (lower is better) Translates to: KRWLSSKICFLT*TRTSVNRKANY Trigger: GTAGTTTGCCTTTCTGTTGACACTGGTCCTGGTGCATGTTAGAAAGCAAATTTTGGAAGACAGCCACCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR TCA 90 bp | GCACTCTGTCCAGTCTGGGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGCCGGGTCTTCCAGCCTaGGCTGCTTTTACACGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALCPVWESHSSLSPRPHGPGLPA*AAFTRG Trigger: GCCCCGTGTAAAAGCAGCTCAGGCTGGAAGACCCGG...CCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAGACTGGACAGAGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR TCA 90 bp | GCACTCTGTCCAGTCTGGGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGGCAGGTTGGAGGCCTTaGTGTCCCCGTGCACGTACT | + |
|
Preference number: 4 (lower is better) Translates to: ALCPVWESHSSLSPRPHGAGWRP*CPRART Trigger: AGTACGTGCACGGGGACATCAAGGCCTCCAACCTGC...CCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAGACTGGACAGAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR TCA 90 bp | CCGCCGCTGGCTGAGACATGCTTCCATGTATTGCTCCTTGGGACTCCACACTTCCCGGGTCTTCCAGCCTaGGCTGCTTTTACACGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PPLAETCFHVLLLGTPHFPGLPA*AAFTRG Trigger: GCCCCGTGTAAAAGCAGCTCAGGCTGGAAGACCCGG...GAAGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR TCA 90 bp | GGTCCAAGAGAGCAGTGTCTGGGAAGCCGACACAGCAGGGCATGTCCAGTCTCAGCAGGTTGGAGGCCTTaGTGTCCCCGTGCACGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GPREQCLGSRHSRACPVSAGWRP*CPRART Trigger: AGTACGTGCACGGGGACATCAAGGCCTCCAACCTGC...TGAGACTGGACATGCCCTGCTGTGTCGGCTTCCCAGACACTGCTCTCTTGGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR TCA 90 bp | GCACTCTGTCCAGTCTGGGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTGCACCTGTGTGTCTaGGCACTCCATGTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALCPVWESHSSLSPRPHGLHLCV*ALHVLH Trigger: GTGGAGGACATGGAGTGCTCAGACACACAGGTGCAA...CCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAGACTGGACAGAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR GCA 90 bp | CAGTGTCTGGGAAGCCGACACAGCAGGGCATGTCCAGTCTCAGCAGCACACGCAGTCTGTGCGGCCTCTTaGACCTGTGTGTCTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QCLGSRHSRACPVSAAHAVCAAS*TCVSEH Trigger: GTGCTCAGACACACAGGTGCAAGAGGCCGCACAGAC...TGCGTGTGCTGCTGAGACTGGACATGCCCTGCTGTGTCGGCTTCCCAGACACTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTCTGGGAAGCCGACACAGCAGGGCATGTCCAGTCTCAGCAGCACACGCAGTGTCCGCCAGATAGATaGAGCCAAAGCCACCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVWEADTAGHVQSQQHTQCPPDR*SQSHLG Trigger: GCCAAGGTGGCTTTGGCTGCATCTATCTGGCGGACA...CTGCGTGTGCTGCTGAGACTGGACATGCCCTGCTGTGTCGGCTTCCCAGACACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCCAGTCTGGGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATGTGTCCGCCAGATAGATaGAGCCAAAGCCACCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSSLGIAQQPEPQTTWVMCPPDR*SQSHLG Trigger: GCCAAGGTGGCTTTGGCTGCATCTATCTGGCGGACA...CATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAGACTGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR GCA 90 bp | GGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATGACGACTAAAGATTGGAACTGTCAGAGCTaGTGCAGCCCGCCGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GIAQQPEPQTTWVMTTKDWNCQS*CSPPLA Trigger: AGCCAGCGGCGGGCTGCAGCAGCTCTGACAGTTCCA...ATCTTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
||
| CDS-3UTR GCA 90 bp | CTGCTGAGCACTCTGTCCAGTCTGGGAATCGCACAGCAGCCTGAGCCCCAGACCTCCAATCCCAAATGCTaGTGCCTCCTGGAACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLSTLSSLGIAQQPEPQTSNPKC*CLLELS Trigger: TGACAGTTCCAGGAGGCAGCAGCATTTGGGATTGGA...GGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAGACTGGACAGAGTGCTCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
||
| CDS-3UTR GCA 90 bp | CCACGTCACGTGATGACTCAACAGTCCACGGGCGGAGCCAGTCACAGTTGCTGCTGTTCCAATCCCAAATaGTGCTGCCTCCTGGAACGG | + |
|
Preference number: 4 (lower is better) Translates to: PRHVMTQQSTGGASHSCCCSNPK*CCLLER Trigger: CCGTTCCAGGAGGCAGCAGCATTTGGGATTGGAACA...GCAGCAACTGTGACTGGCTCCGCCCGTGGACTGTTGAGTCATCACGTGACGTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| 3UTR CAA 72 bp | GTGCAGAGCATAGCCGCAATCCCTCAGCTACTGCCTTaGGGAGGCAGACACAGGCAGGCCAGGAGTTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQSIAAIPQLLP*GGRHRQARSLR Trigger: TCTCAAACTCCTGGCCTGCCTGTGTCTGCCTCCCAAAGGCAGTAGCTGAGGGATTGCGGCTATGCTCTGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| CDS-3UTR GCA 90 bp | GCACTCTGTCCAGTCTGGGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGCACCGCGCTTTCTTCTaGTTCTTTCTTCCGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: ALCPVWESHSSLSPRPHGHRAFF*FFLPLL Trigger: AAGAAGCGGAAGAAAGAAGCAGAAGAAAGCGCGGTG...CCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAGACTGGACAGAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR GCA 90 bp | CCGCCGCTGGCTGAGACATGCTTCCATGTATTGCTCCTTGGGACTCCACACTTCGCTAGTGGGAGGAAGTaGAGCCTGGGGCTGTATATG | + |
|
Preference number: 4 (lower is better) Translates to: PPLAETCFHVLLLGTPHFASGRK*SLGLYM Trigger: CATATACAGCCCCAGGCTGCACTTCCTCCCACTAGC...GAAGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTGAGCACTCTGTCCAGTCTGGGAATCGCACAGCAGCCTGAGCCCCAGACCGCTTCATATATTTTCTaGAGGTCACTCCCAAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSTLSSLGIAQQPEPQTASYIF*RSLPKR Trigger: CCGCTTTGGGAGTGACCTTCAGAAAATATATGAAGC...GGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAGACTGGACAGAGTGCTCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR GCA 90 bp | GGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATGACGACTAAAGATGTCTGTGCGGCCTCTTaGACCTGTGTGTCTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GIAQQPEPQTTWVMTTKDVCAAS*TCVSEH Trigger: GTGCTCAGACACACAGGTGCAAGAGGCCGCACAGAC...ATCTTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR CCA 90 bp | CTGCTGAGCACTCTGTCCAGTCTGGGAATCGCACAGCAGCCTGAGCCCCAGACCCGTCATGGCACCTTTTaGGATCTTCCTTGTACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLSTLSSLGIAQQPEPQTRHGTF*DLPCTL Trigger: AAGAGTACAAGGAAGATCCCAAAAGGTGCCATGACG...GGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAGACTGGACAGAGTGCTCAGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| 3UTR CAA 72 bp | AAAAAGCAGACAATAGCAGACGGGGCCCGGCAGCGTTaGAAGGAAACAAGCGAACGTGGAGCGTTGGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KKQTIADGARQR*KETSERGALAS Trigger: AGAGGCCAACGCTCCACGTTCGCTTGTTTCCTTCAAACGCTGCCGGGCCCCGTCTGCTATTGTCTGCTTTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR TCA 90 bp | CCACGTCACGTGATGACTCAACAGTCCACGGGCGGAGCCAGTCACAGTTGCTGCGCTTCATATATTTTCTaGAGGTCACTCCCAAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PRHVMTQQSTGGASHSCCASYIF*RSLPKR Trigger: CCGCTTTGGGAGTGACCTTCAGAAAATATATGAAGC...GCAGCAACTGTGACTGGCTCCGCCCGTGGACTGTTGAGTCATCACGTGACGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| CDS-3UTR TCA 90 bp | CTGGGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATGACGACTAAAAAGGAAGACAGCCGCTaGGCCACTGGATCATGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGIAQQPEPQTTWVMTTKKEDSR*ATGSCN Trigger: ATTGCATGATCCAGTGGCTCAGCGGCTGTCTTCCTT...TTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR GCA 90 bp | GGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATGACGACTAAAGATTGTCCGCCAGATAGATaGAGCCAAAGCCACCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GIAQQPEPQTTWVMTTKDCPPDR*SQSHLG Trigger: GCCAAGGTGGCTTTGGCTGCATCTATCTGGCGGACA...ATCTTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR GCA 90 bp | GGTCCAAGAGAGCAGTGTCTGGGAAGCCGACACAGCAGGGCATGTCCAGTCTCACACCGCGCTTTCTTCTaGTTCTTTCTTCCGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GPREQCLGSRHSRACPVSHRAFF*FFLPLL Trigger: AAGAAGCGGAAGAAAGAAGCAGAAGAAAGCGCGGTG...TGAGACTGGACATGCCCTGCTGTGTCGGCTTCCCAGACACTGCTCTCTTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR CCA 90 bp | GGTCCAAGAGAGCAGTGTCTGGGAAGCCGACACAGCAGGGCATGTCCAGTCTCAGAGGTCCATTGTCACTaGGTTCCACTTTCACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GPREQCLGSRHSRACPVSEVHCH*VPLSQH Trigger: GTGTTGTGAAAGTGGAACCCAGTGACAATGGACCTC...TGAGACTGGACATGCCCTGCTGTGTCGGCTTCCCAGACACTGCTCTCTTGGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTCTGGGAAGCCGACACAGCAGGGCATGTCCAGTCTCAGCAGCACACGCAGACGTACTCATGCTCATaGATGTACTCCAGGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: SVWEADTAGHVQSQQHTQTYSCS*MYSRIS Trigger: GGATATCCTGGAGTACATCCATGAGCATGAGTACGT...CTGCGTGTGCTGCTGAGACTGGACATGCCCTGCTGTGTCGGCTTCCCAGACACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| 3UTR CAA 72 bp | GATGACTCAACAGTCCACGGGCGGAGCCAGTCACAGTaGCTGCTCCTGTCCATCACACAATGGTTTACACAG | + |
|
Preference number: 4 (lower is better) Translates to: DDSTVHGRSQSQ*LLLSITQWFTQ Trigger: CTGTGTAAACCATTGTGTGATGGACAGGAGCAGCAACTGTGACTGGCTCCGCCCGTGGACTGTTGAGTCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| CDS-3UTR TCA 90 bp | AAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGTCCAGTCTCCGGGTCTTCCAGCCTaGGCTGCTTTTACACGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGSSFLKSKEPAEHSVQSPGLPA*AAFTRG Trigger: GCCCCGTGTAAAAGCAGCTCAGGCTGGAAGACCCGG...AGACTGGACAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR TCA 90 bp | GTCCTAGGCCGTGTGAGGTATATTCTGAACACACCACGGCTGCCCAAAAACACACAAATCACCACGTCTTaGTGGGGCCACGCCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLGRVRYILNTPRLPKNTQITTS*WGHAFV Trigger: CACAAAGGCGTGGCCCCATCAAGACGTGGTGATTTG...TGTGTTTTTGGGCAGCCGTGGTGTGTTCAGAATATACCTCACACGGCCTAGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| CDS-3UTR GCA 90 bp | CTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGTCCAGTCTGGGAATCGTCTGTGCGGCCTCTTaGACCTGTGTGTCTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHSLKARSLLSTLSSLGIVCAAS*TCVSEH Trigger: GTGCTCAGACACACAGGTGCAAGAGGCCGCACAGAC...GATTCCCAGACTGGACAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCCCGGGTCTTCCAGCCTaGGCTGCTTTTACACGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SKRDLKVLHSLKARSLLSPGLPA*AAFTRG Trigger: GCCCCGTGTAAAAGCAGCTCAGGCTGGAAGACCCGG...GCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR TCA 90 bp | CTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGTCCAGTCTGGGAATCCAAATCACCACGTCTTaGTGGGGCCACGCCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LHSLKARSLLSTLSSLGIQITTS*WGHAFV Trigger: CACAAAGGCGTGGCCCCATCAAGACGTGGTGATTTG...GATTCCCAGACTGGACAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR TCA 90 bp | TCCTGGAATCTCGTTTACTTCTGGGCTTTCTTTCTGGTTCGTGAACCCCTACGGCAAATCACCACGTCTTaGTGGGGCCACGCCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SWNLVYFWAFFLVREPLRQITTS*WGHAFV Trigger: CACAAAGGCGTGGCCCCATCAAGACGTGGTGATTTG...CCGTAGGGGTTCACGAACCAGAAAGAAAGCCCAGAAGTAAACGAGATTCCAGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR TCA 90 bp | GTGAACCCCTACGGTCTAGCCTTAGCATGTCTTGTTCCAATCCCAAATGCTGCTTTGCACCTGTGTGTCTaGGCACTCCATGTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VNPYGLALACLVPIPNAALHLCV*ALHVLH Trigger: GTGGAGGACATGGAGTGCTCAGACACACAGGTGCAA...AGCAGCATTTGGGATTGGAACAAGACATGCTAAGGCTAGACCGTAGGGGTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR GCA 90 bp | GGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATGACGACTAAAGATTGTTCCAATCCCAAATaGTGCTGCCTCCTGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GIAQQPEPQTTWVMTTKDCSNPK*CCLLEL Trigger: CAGTTCCAGGAGGCAGCAGCATTTGGGATTGGAACA...ATCTTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
||
| CDS-3UTR CCA 90 bp | GTGAACCCCTACGGTCTAGCCTTAGCATGTCTTGTTCCAATCCCAAATGCTGCTGGAGGAAGTGCAGCCTaGGGCTGTATATGGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VNPYGLALACLVPIPNAAGGSAA*GCIWKG Trigger: TCCCTTCCATATACAGCCCCAGGCTGCACTTCCTCC...AGCAGCATTTGGGATTGGAACAAGACATGCTAAGGCTAGACCGTAGGGGTTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCGCAGGTTGGAGGCCTTaGTGTCCCCGTGCACGTACT | + |
|
Preference number: 4 (lower is better) Translates to: SKRDLKVLHSLKARSLLSAGWRP*CPRART Trigger: AGTACGTGCACGGGGACATCAAGGCCTCCAACCTGC...GCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR TCA 90 bp | GTGAACCCCTACGGTCTAGCCTTAGCATGTCTTGTTCCAATCCCAAATGCTGCTAAGGAAGACAGCCGCTaGGCCACTGGATCATGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VNPYGLALACLVPIPNAAKEDSR*ATGSCN Trigger: ATTGCATGATCCAGTGGCTCAGCGGCTGTCTTCCTT...AGCAGCATTTGGGATTGGAACAAGACATGCTAAGGCTAGACCGTAGGGGTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR GCA 90 bp | CTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGTCCAGTCTGGGAATCCCGTGCACGTACTCATaGTCATGGATGTACTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHSLKARSLLSTLSSLGIPCTYS*SWMYSR Trigger: CCTGGAGTACATCCATGAGCATGAGTACGTGCACGG...GATTCCCAGACTGGACAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR GCA 90 bp | ACATCGAGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGTGGAACTGTCAGAGCTaGTGCAGCCCGCCGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TSSKRDLKVLHSLKARSLWNCQS*CSPPLA Trigger: AGCCAGCGGCGGGCTGCAGCAGCTCTGACAGTTCCA...CAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCTCGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
||
| CDS-3UTR CCA 90 bp | GGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATGACGACTAAAGATGAGGTCCATTGTCACTaGGTTCCACTTTCACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: GIAQQPEPQTTWVMTTKDEVHCH*VPLSQH Trigger: GTGTTGTGAAAGTGGAACCCAGTGACAATGGACCTC...ATCTTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR CCA 90 bp | AGAGAGCAGTGTCTGGGAAGCCGACACAGCAGGGCATGTCCAGTCTCAGCAGCACTTAGCGATCTCACCTaGCTTATTTTTCTCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: REQCLGSRHSRACPVSAALSDLT*LIFLRK Trigger: TTTCCTGAGAAAAATAAGCCAGGTGAGATCGCTAAG...TGCTGCTGAGACTGGACATGCCCTGCTGTGTCGGCTTCCCAGACACTGCTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| CDS-3UTR CCA 90 bp | ACATCGAGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGGCTGCAGCCCGCCGCTaGCTGAGACATGCTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: TSSKRDLKVLHSLKARSLAAARR*LRHASM Trigger: CATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCAGC...CAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCTCGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
||
| 3UTR CAA 72 bp | TGCAGCCCGCCGCTGGCTGAGACATGCTTCCATGTATaGCTCCTTGGGACTCCACACTTCCTAATAACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CSPPLAETCFHV*LLGTPHFLITK Trigger: TTTTGTTATTAGGAAGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGTCCAGTCTTTGCACCTGTGTGTCTaGGCACTCCATGTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KGSSFLKSKEPAEHSVQSLHLCV*ALHVLH Trigger: GTGGAGGACATGGAGTGCTCAGACACACAGGTGCAA...AGACTGGACAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR GCA 90 bp | AGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCGTCTGTGCGGCCTCTTaGACCTGTGTGTCTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKRDLKVLHSLKARSLLSVCAAS*TCVSEH Trigger: GTGCTCAGACACACAGGTGCAAGAGGCCGCACAGAC...GCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR GCA 90 bp | CTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGTCCAGTCTGGGAATCCCGCTGGCTGAGACATaGTTCCATGTATTGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LHSLKARSLLSTLSSLGIPLAET*FHVLLL Trigger: AAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGG...GATTCCCAGACTGGACAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
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| CDS-3UTR CCA 90 bp | CTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGTCCAGTCTGGGAATCCACTGCCAACCGGTTTaGAAGAATTTGTGTCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LHSLKARSLLSTLSSLGIHCQPV*KNLCPP Trigger: TGGCGGACACAAATTCTTCCAAACCGGTTGGCAGTG...GATTCCCAGACTGGACAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR CCA 90 bp | ATACACACGGTGCCAGCAGCCAACTTGCTTACCCATTTGCCCAACCCTGATTGCACGTACTCATGCTCATaGATGTACTCCAGGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: IHTVPAANLLTHLPNPDCTYSCS*MYSRIS Trigger: GGATATCCTGGAGTACATCCATGAGCATGAGTACGT...GCAATCAGGGTTGGGCAAATGGGTAAGCAAGTTGGCTGCTGGCACCGTGTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| CDS-3UTR CCA 90 bp | GGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATGACGACTAAAGATCGTCATGGCACCTTTTaGGATCTTCCTTGTACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GIAQQPEPQTTWVMTTKDRHGTF*DLPCTL Trigger: AAGAGTACAAGGAAGATCCCAAAAGGTGCCATGACG...ATCTTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR CCA 90 bp | AGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGAATGCTGCTGCCTCCTaGAACTGTCAGAGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RDLKVLHSLKARSLLSTLNAAAS*NCQSCC Trigger: GCAGCAGCTCTGACAGTTCCAGGAGGCAGCAGCATT...CAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
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| CDS-3UTR CCA 90 bp | CATACCTTACTGTGCTCTTTCTTCCTTAGTGCACACAGCACGCATTCAATAAACAATGCTGCTGCCTCCTaGAACGGGTCTGTGCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HTLLCSFFLSAHSTHSINNAAAS*NGSVRP Trigger: AGGCCGCACAGACCCGTTCCAGGAGGCAGCAGCATT...GTTTATTGAATGCGTGCTGTGTGCACTAAGGAAGAAAGAGCACAGTAAGGTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| CDS-3UTR TCA 90 bp | TACATCGAGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCAGGTTGGAGGCCTTaGTGTCCCCGTGCACGTACT | + |
|
Preference number: 4 (lower is better) Translates to: YIEQKRPKGSSFLKSKEPAGWRP*CPRART Trigger: AGTACGTGCACGGGGACATCAAGGCCTCCAACCTGC...AGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCTCGATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR TCA 90 bp | AGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCCAAATCACCACGTCTTaGTGGGGCCACGCCTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKRDLKVLHSLKARSLLSQITTS*WGHAFV Trigger: CACAAAGGCGTGGCCCCATCAAGACGTGGTGATTTG...GCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR TCA 90 bp | AAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGTCCAGTCTAAGGAAGACAGCCGCTaGGCCACTGGATCATGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KGSSFLKSKEPAEHSVQSKEDSR*ATGSCN Trigger: ATTGCATGATCCAGTGGCTCAGCGGCTGTCTTCCTT...AGACTGGACAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR TCA 90 bp | AGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCTTGCACCTGTGTGTCTaGGCACTCCATGTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SKRDLKVLHSLKARSLLSLHLCV*ALHVLH Trigger: GTGGAGGACATGGAGTGCTCAGACACACAGGTGCAA...GCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR GCA 90 bp | ATGAATAGGCAGAGAAGATGGTTCCTGGAATCTCGTTTACTTCTGGGCTTTCTTCCACTTACGGGTCTGTaGGGCCTCTTGCACCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: MNRQRRWFLESRLLLGFLPLTGL*GLLHLC Trigger: ACACAGGTGCAAGAGGCCGCACAGACCCGTAAGTGG...AAGAAAGCCCAGAAGTAAACGAGATTCCAGGAACCATCTTCTCTGCCTATTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR CCA 90 bp | CCAGTGTCAACAGAAAGGCAAACTACCGTGCTGGCCTCTGTCACTAAAGCATTTAGCCACCTTGGCCAATaGGCAATCCTAGTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: PVSTERQTTVLASVTKAFSHLGQ*AILVST Trigger: AGTGGAAACTAGGATTGCCCATTGGCCAAGGTGGCT...AAATGCTTTAGTGACAGAGGCCAGCACGGTAGTTTGCCTTTCTGTTGACACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR CCA 90 bp | GGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATGACGACTAAAGATTTTATGAACTCCATCTaGGCAGTACCGATAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: GIAQQPEPQTTWVMTTKDFMNSI*AVPISK Trigger: CTTGCTTATCGGTACTGCCCAGATGGAGTTCATAAA...ATCTTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR CCA 90 bp | AGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGCCATGTATTGCTCCTTaGGACTCCACACTTCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RDLKVLHSLKARSLLSTLPCIAP*DSTLRV Trigger: GACCCGAAGTGTGGAGTCCCAAGGAGCAATACATGG...CAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
||
| CDS-3UTR TCA 90 bp | GACCAGTGTCAACAGAAAGGCAAACTACCGTGCTGGCCTCTGTCACTAAAGCATGCTTCATATATTTTCTaGAGGTCACTCCCAAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: DQCQQKGKLPCWPLSLKHASYIF*RSLPKR Trigger: CCGCTTTGGGAGTGACCTTCAGAAAATATATGAAGC...ATGCTTTAGTGACAGAGGCCAGCACGGTAGTTTGCCTTTCTGTTGACACTGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR GCA 90 bp | AGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGCCGCTGGCTGAGACATaGTTCCATGTATTGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RDLKVLHSLKARSLLSTLPLAET*FHVLLL Trigger: AAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGG...CAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
||
| CDS-3UTR GCA 90 bp | AAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGTCCAGTCTTCCAATCCCAAATGCTaGTGCCTCCTGGAACTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KGSSFLKSKEPAEHSVQSSNPKC*CLLELS Trigger: TGACAGTTCCAGGAGGCAGCAGCATTTGGGATTGGA...AGACTGGACAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGTCCAGTCTCACTGCCAACCGGTTTaGAAGAATTTGTGTCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGSSFLKSKEPAEHSVQSHCQPV*KNLCPP Trigger: TGGCGGACACAAATTCTTCCAAACCGGTTGGCAGTG...AGACTGGACAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR CCA 90 bp | GGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATGACGACTAAAGATCTTAGCGATCTCACCTaGCTTATTTTTCTCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GIAQQPEPQTTWVMTTKDLSDLT*LIFLRK Trigger: TTTCCTGAGAAAAATAAGCCAGGTGAGATCGCTAAG...ATCTTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR GCA 90 bp | AAAACAAAAATACAATACTCTACAGCTTATGTACCCGGGCACACGGAGACAAAGTGTCCGCCAGATAGATaGAGCCAAAGCCACCTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KTKIQYSTAYVPGHTETKCPPDR*SQSHLG Trigger: GCCAAGGTGGCTTTGGCTGCATCTATCTGGCGGACA...CTTTGTCTCCGTGTGCCCGGGTACATAAGCTGTAGAGTATTGTATTTTTGTTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| CDS-3UTR GCA 90 bp | TACATCGAGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTTCCAATCCCAAATGCTaGTGCCTCCTGGAACGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: YIEQKRPKGSSFLKSKEPSNPKC*CLLERV Trigger: GACCCGTTCCAGGAGGCAGCAGCATTTGGGATTGGA...AGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCTCGATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| CDS-3UTR CCA 90 bp | AAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTAGCCACCTTGGCCAATaGGCAATCCTAGTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: KRPKGSSFLKSKEPAEHSSHLGQ*AILVST Trigger: AGTGGAAACTAGGATTGCCCATTGGCCAAGGTGGCT...AGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR CCA 90 bp | AGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCAGCCACCTTGGCCAATaGGCAATCCTAGTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SKRDLKVLHSLKARSLLSSHLGQ*AILVST Trigger: AGTGGAAACTAGGATTGCCCATTGGCCAAGGTGGCT...GCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR CCA 90 bp | ACATCGAGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCAGCCAAAGCCACCTTaGCCAATGGGCAATCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSSKRDLKVLHSLKARSLQPKPP*PMGNPS Trigger: ACTAGGATTGCCCATTGGCCAAGGTGGCTTTGGCTG...CAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCTCGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR CCA 90 bp | ATTCTAAAGGAAACAGAAGTCTCTAGGCCCCTTCTCCTAGGGCCCACGGGAAGTCTTAGCGATCTCACCTaGCTTATTTTTCTCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ILKETEVSRPLLLGPTGSLSDLT*LIFLRK Trigger: TTTCCTGAGAAAAATAAGCCAGGTGAGATCGCTAAG...ACTTCCCGTGGGCCCTAGGAGAAGGGGCCTAGAGACTTCTGTTTCCTTTAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| CDS-3UTR CCA 90 bp | ACATCGAGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCCATGTATTGCTCCTTaGGACTCCACACTTCGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSSKRDLKVLHSLKARSLPCIAP*DSTLRV Trigger: GACCCGAAGTGTGGAGTCCCAAGGAGCAATACATGG...CAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCTCGATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
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| CDS-3UTR CCA 90 bp | TACATCGAGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTAATGCTGCTGCCTCCTaGAACTGTCAGAGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YIEQKRPKGSSFLKSKEPNAAAS*NCQSCC Trigger: GCAGCAGCTCTGACAGTTCCAGGAGGCAGCAGCATT...AGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCTCGATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGTCCAGTCTTCCTTGTACTCTTTATaGACTCCATCTGGGCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KGSSFLKSKEPAEHSVQSSLYSL*TPSGQY Trigger: GTACTGCCCAGATGGAGTTCATAAAGAGTACAAGGA...AGACTGGACAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTCACCGCGCTTTCTTCTaGTTCTTTCTTCCGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KRPKGSSFLKSKEPAEHSHRAFF*FFLPLL Trigger: AAGAAGCGGAAGAAAGAAGCAGAAGAAAGCGCGGTG...AGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR GCA 90 bp | AGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCCATGCTTCCATGTATTaGTCCTTGGGACTCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: SKRDLKVLHSLKARSLLSHASMY*SLGLHT Trigger: AGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATG...GCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
||
| CDS-3UTR GCA 90 bp | AAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTCATGCTTCCATGTATTaGTCCTTGGGACTCCACACT | + |
|
Preference number: 4 (lower is better) Translates to: KRPKGSSFLKSKEPAEHSHASMY*SLGLHT Trigger: AGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATG...AGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
||
| CDS-3UTR CCA 90 bp | ACATCGAGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGAGCCACCTTGGCCAATaGGCAATCCTAGTTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TSSKRDLKVLHSLKARSLSHLGQ*AILVST Trigger: AGTGGAAACTAGGATTGCCCATTGGCCAAGGTGGCT...CAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCTCGATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR CCA 90 bp | ATGAATAGGCAGAGAAGATGGTTCCTGGAATCTCGTTTACTTCTGGGCTTTCTTCACTGCCAACCGGTTTaGAAGAATTTGTGTCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MNRQRRWFLESRLLLGFLHCQPV*KNLCPP Trigger: TGGCGGACACAAATTCTTCCAAACCGGTTGGCAGTG...AAGAAAGCCCAGAAGTAAACGAGATTCCAGGAACCATCTTCTCTGCCTATTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR CCA 90 bp | AGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCGAGGTCCATTGTCACTaGGTTCCACTTTCACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SKRDLKVLHSLKARSLLSEVHCH*VPLSQH Trigger: GTGTTGTGAAAGTGGAACCCAGTGACAATGGACCTC...GCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR CCA 90 bp | AAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGTCCAGTCTACGTACTCATGCTCATaGATGTACTCCAGGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: KGSSFLKSKEPAEHSVQSTYSCS*MYSRIS Trigger: GGATATCCTGGAGTACATCCATGAGCATGAGTACGT...AGACTGGACAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR CCA 90 bp | AGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGACGTACTCATGCTCATaGATGTACTCCAGGATATCC | + |
|
Preference number: 4 (lower is better) Translates to: RDLKVLHSLKARSLLSTLTYSCS*MYSRIS Trigger: GGATATCCTGGAGTACATCCATGAGCATGAGTACGT...CAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR CCA 90 bp | AGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGCGTCATGGCACCTTTTaGGATCTTCCTTGTACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RDLKVLHSLKARSLLSTLRHGTF*DLPCTL Trigger: AAGAGTACAAGGAAGATCCCAAAAGGTGCCATGACG...CAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR TCA 90 bp | AAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGCTTCATATATTTTCTaGAGGTCACTCCCAAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: KRPKGSSFLKSKEPAEHSASYIF*RSLPKR Trigger: CCGCTTTGGGAGTGACCTTCAGAAAATATATGAAGC...AGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR TCA 90 bp | AAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTTCCTTGTACTCTTTATaGACTCCATCTGGGCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KRPKGSSFLKSKEPAEHSSLYSL*TPSGQY Trigger: GTACTGCCCAGATGGAGTTCATAAAGAGTACAAGGA...AGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR GCA 90 bp | CATACCTTACTGTGCTCTTTCTTCCTTAGTGCACACAGCACGCATTCAATAAACCACCGCGCTTTCTTCTaGTTCTTTCTTCCGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HTLLCSFFLSAHSTHSINHRAFF*FFLPLL Trigger: AAGAAGCGGAAGAAAGAAGCAGAAGAAAGCGCGGTG...GTTTATTGAATGCGTGCTGTGTGCACTAAGGAAGAAAGAGCACAGTAAGGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| CDS-3UTR CCA 90 bp | TACATCGAGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTCACTGCCAACCGGTTTaGAAGAATTTGTGTCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: YIEQKRPKGSSFLKSKEPHCQPV*KNLCPP Trigger: TGGCGGACACAAATTCTTCCAAACCGGTTGGCAGTG...AGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCTCGATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR TCA 90 bp | AAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGTCCAGTCTGTACGAATCCATTTCTaGATTTGCTCTGGTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KGSSFLKSKEPAEHSVQSVRIHF*ICSGLA Trigger: TGCTAAACCAGAGCAAATTCAGAAATGGATTCGTAC...AGACTGGACAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR TCA 90 bp | ACTAAAGCATTTATGCTACTGTGGCCTTCTTGCCCAAAACGAGGCTATTCATCATCCTTGTACTCTTTATaGACTCCATCTGGGCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: TKAFMLLWPSCPKRGYSSSLYSL*TPSGQY Trigger: GTACTGCCCAGATGGAGTTCATAAAGAGTACAAGGA...TGATGAATAGCCTCGTTTTGGGCAAGAAGGCCACAGTAGCATAAATGCTTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| CDS-3UTR CCA 90 bp | AGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCTTTATGAACTCCATCTaGGCAGTACCGATAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SKRDLKVLHSLKARSLLSFMNSI*AVPISK Trigger: CTTGCTTATCGGTACTGCCCAGATGGAGTTCATAAA...GCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR CCA 90 bp | ATGCTACTGTGGCCTTCTTGCCCAAAACGAGGCTATTCATCAGAAATTAAGAAGCGTCATGGCACCTTTTaGGATCTTCCTTGTACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MLLWPSCPKRGYSSEIKKRHGTF*DLPCTL Trigger: AAGAGTACAAGGAAGATCCCAAAAGGTGCCATGACG...CTTCTTAATTTCTGATGAATAGCCTCGTTTTGGGCAAGAAGGCCACAGTAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| CDS-3UTR CCA 90 bp | ATGCTACTGTGGCCTTCTTGCCCAAAACGAGGCTATTCATCAGAAATTAAGAAGTTTATGAACTCCATCTaGGCAGTACCGATAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: MLLWPSCPKRGYSSEIKKFMNSI*AVPISK Trigger: CTTGCTTATCGGTACTGCCCAGATGGAGTTCATAAA...CTTCTTAATTTCTGATGAATAGCCTCGTTTTGGGCAAGAAGGCCACAGTAGCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| CDS-3UTR CCA 90 bp | AAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTCTTAGCGATCTCACCTaGCTTATTTTTCTCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KRPKGSSFLKSKEPAEHSLSDLT*LIFLRK Trigger: TTTCCTGAGAAAAATAAGCCAGGTGAGATCGCTAAG...AGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR CCA 90 bp | TACATCGAGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTTTTATGAACTCCATCTaGGCAGTACCGATAAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: YIEQKRPKGSSFLKSKEPFMNSI*AVPISK Trigger: CTTGCTTATCGGTACTGCCCAGATGGAGTTCATAAA...AGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCTCGATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS GCA 90 bp | AGAGCTGCTGCAGCCCGCCGCTGGCTGAGACATGCTTCCATGTATTaGTCCTTGGGACTCCACACTTCGGGTCTGTGCGGCCTCTTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RAAAARRWLRHASMY*SLGLHTSGLCGLLH Trigger: GTGCAAGAGGCCGCACAGACCCGAAGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCAGCAGCTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
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| CDS TCA 90 bp | TGCTGCCTCCTGGAACTGTCAGAGCTGCTGCAGCCCGCCGCTGGCTaGGACATGCTTCCATGTATTGCTCCTTGGGACTCCACACTTCGG | + |
|
Preference number: 5 (lower is better) Translates to: CCLLELSELLQPAAG*DMLPCIAPWDSTLR Trigger: CCGAAGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCAGCAGCTCTGACAGTTCCAGGAGGCAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
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| CDS GCA 90 bp | AATCCCAAATGCTGCTGCCTCCTGGAACGGGTCTGTGCGGCCTCTTaGACCTGTGTGTCTGAGCACTCCATGTCCTCCACAGCGCACACC | + |
|
Preference number: 5 (lower is better) Translates to: NPKCCCLLERVCAAS*TCVSEHSMSSTAHT Trigger: GGTGTGCGCTGTGGAGGACATGGAGTGCTCAGACACACAGGTGCAAGAGGCCGCACAGACCCGTTCCAGGAGGCAGCAGCATTTGGGATT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| CDS GCA 90 bp | GAAGGGATAAGCAAGGGTGGCCACTTACGGGTCTGTGCGGCCTCTTaGACCTGTGTGTCTGAGCACTCCATGTCCTCCACAGCGCACACC | + |
|
Preference number: 5 (lower is better) Translates to: EGISKGGHLRVCAAS*TCVSEHSMSSTAHT Trigger: GGTGTGCGCTGTGGAGGACATGGAGTGCTCAGACACACAGGTGCAAGAGGCCGCACAGACCCGTAAGTGGCCACCCTTGCTTATCCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR CAA 90 bp | CAAGAGAGCAGTGTCTGGGAAGCCGACACAGCAGGGCATGTCCAGTCTCAGCAGAGCAGGTTGGAGGCCTaGATGTCCCCGTGCACGTAC | + |
|
Preference number: 5 (lower is better) Translates to: QESSVWEADTAGHVQSQQSRLEA*MSPCTY Trigger: GTACGTGCACGGGGACATCAAGGCCTCCAACCTGCT...CTGCTGAGACTGGACATGCCCTGCTGTGTCGGCTTCCCAGACACTGCTCTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| CDS-3UTR CAA 90 bp | CCTGGAACTGTCAGAGCTGCTGCAGCCCGCCGCTGGCTGAGACATGCTTCCATGCCAAATCACCACGTCTaGATGGGGCCACGCCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PGTVRAAAARRWLRHASMPNHHV*MGPRLC Trigger: ACAAAGGCGTGGCCCCATCAAGACGTGGTGATTTGG...CATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCAGCAGCTCTGACAGTTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS GCA 90 bp | TGTATTGCTCCTTGGGACTCCACACTTCGGGTCTGTGCGGCCTCTTaGACCTGTGTGTCTGAGCACTCCATGTCCTCCACAGCGCACACC | + |
|
Preference number: 5 (lower is better) Translates to: CIAPWDSTLRVCAAS*TCVSEHSMSSTAHT Trigger: GGTGTGCGCTGTGGAGGACATGGAGTGCTCAGACACACAGGTGCAAGAGGCCGCACAGACCCGAAGTGTGGAGTCCCAAGGAGCAATACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
||
| CDS GCA 90 bp | TCCTGGAACTGTCAGAGCTGCTGCAGCCCGCCGCTGGCTGAGACATaGTTCCATGTATTGCTCCTTGGGACTCCACACTTCGGGTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SWNCQSCCSPPLAET*FHVLLLGTPHFGSV Trigger: CACAGACCCGAAGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCAGCAGCTCTGACAGTTCCAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
||
| CDS GCA 90 bp | TTCTGGGCTTTCTTTCTGGTTCGTGAACGGGTCTGTGCGGCCTCTTaGACCTGTGTGTCTGAGCACTCCATGTCCTCCACAGCGCACACC | + |
|
Preference number: 5 (lower is better) Translates to: FWAFFLVRERVCAAS*TCVSEHSMSSTAHT Trigger: GGTGTGCGCTGTGGAGGACATGGAGTGCTCAGACACACAGGTGCAAGAGGCCGCACAGACCCGTTCACGAACCAGAAAGAAAGCCCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072040.7 |
||
| CDS-3UTR CAA 90 bp | CTGGGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATGACGACTAAAAGCAGGTTGGAGGCCTaGATGTCCCCGTGCACGTAC | + |
|
Preference number: 5 (lower is better) Translates to: LGIAQQPEPQTTWVMTTKSRLEA*MSPCTY Trigger: GTACGTGCACGGGGACATCAAGGCCTCCAACCTGCT...TTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR CAA 90 bp | CTGCTGAGCACTCTGTCCAGTCTGGGAATCGCACAGCAGCCTGAGCCCCAGACCACATGCTTCCATGTATaGCTCCTTGGGACTCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LLSTLSSLGIAQQPEPQTTCFHV*LLGTPH Trigger: GTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGT...GGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAGACTGGACAGAGTGCTCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
||
| CDS-3UTR CAA 90 bp | GGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATGACGACTAAAGATAGCAGGTTGGAGGCCTaGATGTCCCCGTGCACGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GIAQQPEPQTTWVMTTKDSRLEA*MSPCTY Trigger: GTACGTGCACGGGGACATCAAGGCCTCCAACCTGCT...ATCTTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS TCA 90 bp | CCAAGTATTTCCAAATCACCACGTCTTGATGGGGCCACGCCTTTGTaGGCGTCGATGCTGGTGAACTCCAGGGTGCCGTCATGGCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: PSISKSPRLDGATPL*ASMLVNSRVPSWHL Trigger: AAGGTGCCATGACGGCACCCTGGAGTTCACCAGCATCGACGCTCACAAAGGCGTGGCCCCATCAAGACGTGGTGATTTGGAAATACTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021539.16 ENSMUST00000072040.7 ENSMUST00000085026.12 ENSMUST00000220629.2 ENSMUST00000221312.2 |
||
| CDS GCA 90 bp | CTACGGTCTAGCCTTAGCATGTCTTGTTCCAATCCCAAATGCTGCTaGCTCCTGGAACGGGTCTGTGCGGCCTCTTGCACCTGTGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LRSSLSMSCSNPKCC*LLERVCAASCTCVS Trigger: AGACACACAGGTGCAAGAGGCCGCACAGACCCGTTCCAGGAGGCAGCAGCATTTGGGATTGGAACAAGACATGCTAAGGCTAGACCGTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| CDS CCA 90 bp | CTAGCCTTAGCATGTCTTGTTCCAATCCCAAATGCTGCTGCCTCCTaGAACGGGTCTGTGCGGCCTCTTGCACCTGTGTGTCTGAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: LALACLVPIPNAAAS*NGSVRPLAPVCLST Trigger: AGTGCTCAGACACACAGGTGCAAGAGGCCGCACAGACCCGTTCCAGGAGGCAGCAGCATTTGGGATTGGAACAAGACATGCTAAGGCTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| CDS-3UTR CAA 90 bp | AGTGTCTGGGAAGCCGACACAGCAGGGCATGTCCAGTCTCAGCAGCACACGCAGGTGAAAAGAGGTCCATaGTCACTGGGTTCCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVWEADTAGHVQSQQHTQVKRGP*SLGSTF Trigger: GAAAGTGGAACCCAGTGACAATGGACCTCTTTTCAC...CTGCGTGTGCTGCTGAGACTGGACATGCCCTGCTGTGTCGGCTTCCCAGACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR CAA 90 bp | GCTTCTGACTTTAGACTGTGGGGCTGCTCTCAGACAGGCCATACCTTACTGTGCCCAAATCACCACGTCTaGATGGGGCCACGCCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ASDFRLWGCSQTGHTLLCPNHHV*MGPRLC Trigger: ACAAAGGCGTGGCCCCATCAAGACGTGGTGATTTGG...GCACAGTAAGGTATGGCCTGTCTGAGAGCAGCCCCACAGTCTAAAGTCAGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| CDS-3UTR CAA 90 bp | CTGTCCAGTCTGGGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATGTCTTTGAGGCTGGTCTaGTCTTCACACTTCCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LSSLGIAQQPEPQTTWVMSLRLV*SSHFRS Trigger: AGAACGGAAGTGTGAAGACAAGACCAGCCTCAAAGA...CATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAGACTGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATGACGACTAAATCCATGTATTGCTCCTaGGGACTCCACACTTCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LGIAQQPEPQTTWVMTTKSMYCS*GLHTSG Trigger: ACCCGAAGTGTGGAGTCCCAAGGAGCAATACATGGA...TTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
||
| CDS CCA 90 bp | TGGGTTCCACTTTCACAACACAGGGCGCGTCACTGCCAACCGGTTTaGAAGAATTTGTGTCCGCCAGATAGATGCAGCCAAAGCCACCTT | + |
|
Preference number: 5 (lower is better) Translates to: WVPLSQHRARHCQPV*KNLCPPDRCSQSHL Trigger: AAGGTGGCTTTGGCTGCATCTATCTGGCGGACACAAATTCTTCCAAACCGGTTGGCAGTGACGCGCCCTGTGTTGTGAAAGTGGAACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021539.16 ENSMUST00000072040.7 ENSMUST00000085026.12 ENSMUST00000220629.2 ENSMUST00000221312.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATGACGACTAAAACATGCTTCCATGTATaGCTCCTTGGGACTCCACAC | + |
|
Preference number: 5 (lower is better) Translates to: LGIAQQPEPQTTWVMTTKTCFHV*LLGTPH Trigger: GTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGT...TTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
||
| CDS GCA 90 bp | CGTCACTGCCAACCGGTTTGGAAGAATTTGTGTCCGCCAGATAGATaGAGCCAAAGCCACCTTGGCCAATGGGCAATCCTAGTTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: RHCQPVWKNLCPPDR*SQSHLGQWAILVST Trigger: AGTGGAAACTAGGATTGCCCATTGGCCAAGGTGGCTTTGGCTGCATCTATCTGGCGGACACAAATTCTTCCAAACCGGTTGGCAGTGACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021539.16 ENSMUST00000072040.7 ENSMUST00000085026.12 ENSMUST00000220629.2 ENSMUST00000221312.2 |
||
| CDS-3UTR CAA 90 bp | AGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGAGCAGGTTGGAGGCCTaGATGTCCCCGTGCACGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RDLKVLHSLKARSLLSTLSRLEA*MSPCTY Trigger: GTACGTGCACGGGGACATCAAGGCCTCCAACCTGCT...CAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR CAA 90 bp | CTGGGAATCGCACAGCAGCCTGAGCCCCAGACCACATGGGTTATGACGACTAAAAATCCATTTCTGAATTaGCTCTGGTTTAGCAGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGIAQQPEPQTTWVMTTKNPFLN*LWFSSP Trigger: AGGGCTGCTAAACCAGAGCAAATTCAGAAATGGATT...TTTAGTCGTCATAACCCATGTGGTCTGGGGCTCAGGCTGCTGTGCGATTCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR CAA 90 bp | GGGCGGAGCCAGTCACAGTTGCTGCTCCTGTCCATCACACAATGGTTTACACAGATCAAAGCTGCGACGTaGTCTCTGTATCTAATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GRSQSQLLLLSITQWFTQIKAAT*SLYLIL Trigger: CAAAATTAGATACAGAGACAACGTCGCAGCTTTGAT...CTGTGTAAACCATTGTGTGATGGACAGGAGCAGCAACTGTGACTGGCTCCGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| CDS-3UTR CAA 90 bp | GACCAGTGTCAACAGAAAGGCAAACTACCGTGCTGGCCTCTGTCACTAAAGCATTCTTTGAGGCTGGTCTaGTCTTCACACTTCCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: DQCQQKGKLPCWPLSLKHSLRLV*SSHFRS Trigger: AGAACGGAAGTGTGAAGACAAGACCAGCCTCAAAGA...ATGCTTTAGTGACAGAGGCCAGCACGGTAGTTTGCCTTTCTGTTGACACTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
||
| CDS-3UTR CAA 90 bp | ACATCGAGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCCAAATCACCACGTCTaGATGGGGCCACGCCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: TSSKRDLKVLHSLKARSLPNHHV*MGPRLC Trigger: ACAAAGGCGTGGCCCCATCAAGACGTGGTGATTTGG...CAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCTCGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR CAA 90 bp | AAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGTCCAGTCTGTGAAAAGAGGTCCATaGTCACTGGGTTCCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KGSSFLKSKEPAEHSVQSVKRGP*SLGSTF Trigger: GAAAGTGGAACCCAGTGACAATGGACCTCTTTTCAC...AGACTGGACAGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR CAA 90 bp | TACATCGAGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTCCAAATCACCACGTCTaGATGGGGCCACGCCTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: YIEQKRPKGSSFLKSKEPPNHHV*MGPRLC Trigger: ACAAAGGCGTGGCCCCATCAAGACGTGGTGATTTGG...AGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCTCGATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR CAA 90 bp | AAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCACTCTGTGAAAAGAGGTCCATaGTCACTGGGTTCCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KRPKGSSFLKSKEPAEHSVKRGP*SLGSTF Trigger: GAAAGTGGAACCCAGTGACAATGGACCTCTTTTCAC...AGAGTGCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS CCA 90 bp | ATGGCACCTTTTGGGATCTTCCTTGTACTCTTTATGAACTCCATCTaGGCAGTACCGATAAGCAAGGCCATAGTCTACCAAATATACCTG | + |
|
Preference number: 5 (lower is better) Translates to: MAPFGIFLVLFMNSI*AVPISKAIVYQIYL Trigger: CAGGTATATTTGGTAGACTATGGCCTTGCTTATCGGTACTGCCCAGATGGAGTTCATAAAGAGTACAAGGAAGATCCCAAAAGGTGCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021539.16 ENSMUST00000072040.7 ENSMUST00000085026.12 ENSMUST00000220629.2 ENSMUST00000221312.2 |
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| CDS-3UTR CAA 90 bp | ACATCGAGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGGTGAAAAGAGGTCCATaGTCACTGGGTTCCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TSSKRDLKVLHSLKARSLVKRGP*SLGSTF Trigger: GAAAGTGGAACCCAGTGACAATGGACCTCTTTTCAC...CAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCTCGATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR CAA 90 bp | CATACCTTACTGTGCTCTTTCTTCCTTAGTGCACACAGCACGCATTCAATAAACTCTTTGAGGCTGGTCTaGTCTTCACACTTCCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HTLLCSFFLSAHSTHSINSLRLV*SSHFRS Trigger: AGAACGGAAGTGTGAAGACAAGACCAGCCTCAAAGA...GTTTATTGAATGCGTGCTGTGTGCACTAAGGAAGAAAGAGCACAGTAAGGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| CDS-3UTR CAA 90 bp | TACATCGAGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTTCTTTGAGGCTGGTCTaGTCTTCACACTTCCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: YIEQKRPKGSSFLKSKEPSLRLV*SSHFRS Trigger: AGAACGGAAGTGTGAAGACAAGACCAGCCTCAAAGA...AGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCTCGATGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
||
| CDS-3UTR CAA 90 bp | AGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTGCTGAGCATCAAAGCTGCGACGTaGTCTCTGTATCTAATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SKRDLKVLHSLKARSLLSIKAAT*SLYLIL Trigger: CAAAATTAGATACAGAGACAACGTCGCAGCTTTGAT...GCTCAGCAGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS GCA 90 bp | CTCACCTGGCTTATTTTTCTCAGGAAAGCATTTCTCCATCAAAGCTaGGACGTTGTCTCTGTATCTAATTTTGGAATCCCTAACGTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: LTWLIFLRKAFLHQS*DVVSVSNFGIPNVV Trigger: AACTACGTTAGGGATTCCAAAATTAGATACAGAGACAACGTCGCAGCTTTGATGGAGAAATGCTTTCCTGAGAAAAATAAGCCAGGTGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000021539.16 ENSMUST00000072040.7 ENSMUST00000085026.12 ENSMUST00000220629.2 ENSMUST00000221312.2 |
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| CDS-3UTR CAA 90 bp | TACATCGAGCAAAAGAGACCTAAAGGTTCTTCATTCCTTAAAAGCAAGGAGCCTATCAAAGCTGCGACGTaGTCTCTGTATCTAATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: YIEQKRPKGSSFLKSKEPIKAAT*SLYLIL Trigger: CAAAATTAGATACAGAGACAACGTCGCAGCTTTGAT...AGGCTCCTTGCTTTTAAGGAATGAAGAACCTTTAGGTCTCTTTTGCTCGATGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000021539.16 ENSMUST00000085026.12 ENSMUST00000220629.2 |
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| CDS-3UTR CAA 90 bp | TTATGCTACTGTGGCCTTCTTGCCCAAAACGAGGCTATTCATCAGAAATTAAGAATCAAAGCTGCGACGTaGTCTCTGTATCTAATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: LCYCGLLAQNEAIHQKLRIKAAT*SLYLIL Trigger: CAAAATTAGATACAGAGACAACGTCGCAGCTTTGAT...TCTTAATTTCTGATGAATAGCCTCGTTTTGGGCAAGAAGGCCACAGTAGCATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| CDS TCA 72 bp | GGAACGGGTCTGTGCGGCCTCTTGCACCTGTGTGTCTaGGCACTCCATGTCCTCCACAGCGCACACCGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: GTGLCGLLHLCV*ALHVLHSAHRA Trigger: AGCGCGGTGTGCGCTGTGGAGGACATGGAGTGCTCAGACACACAGGTGCAAGAGGCCGCACAGACCCGTTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
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| CDS TCA 72 bp | ACTTCGGGTCTGTGCGGCCTCTTGCACCTGTGTGTCTaGGCACTCCATGTCCTCCACAGCGCACACCGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: TSGLCGLLHLCV*ALHVLHSAHRA Trigger: AGCGCGGTGTGCGCTGTGGAGGACATGGAGTGCTCAGACACACAGGTGCAAGAGGCCGCACAGACCCGAAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
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| CDS TCA 72 bp | CTTACGGGTCTGTGCGGCCTCTTGCACCTGTGTGTCTaGGCACTCCATGTCCTCCACAGCGCACACCGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: LTGLCGLLHLCV*ALHVLHSAHRA Trigger: AGCGCGGTGTGCGCTGTGGAGGACATGGAGTGCTCAGACACACAGGTGCAAGAGGCCGCACAGACCCGTAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| CDS GCA 72 bp | GCAGCCCGCCGCTGGCTGAGACATGCTTCCATGTATTaGTCCTTGGGACTCCACACTTCGGGTCTGTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: AARRWLRHASMY*SLGLHTSGLCG Trigger: GCCGCACAGACCCGAAGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGGGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
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| CDS CAA 90 bp | GCTGCAGCCCGCCGCTGGCTGAGACATGCTTCCATGTATTGCTCCTaGGGACTCCACACTTCGGGTCTGTGCGGCCTCTTGCACCTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: AAARRWLRHASMYCS*GLHTSGLCGLLHLC Trigger: ACACAGGTGCAAGAGGCCGCACAGACCCGAAGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
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| CDS CAA 90 bp | CAGAGCTGCTGCAGCCCGCCGCTGGCTGAGACATGCTTCCATGTATaGCTCCTTGGGACTCCACACTTCGGGTCTGTGCGGCCTCTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QSCCSPPLAETCFHV*LLGTPHFGSVRPLA Trigger: TGCAAGAGGCCGCACAGACCCGAAGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCAGCAGCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
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| CDS GCA 72 bp | TGCTGCTGCCTCCTGGAACGGGTCTGTGCGGCCTCTTaGACCTGTGTGTCTGAGCACTCCATGTCCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: CCCLLERVCAAS*TCVSEHSMSST Trigger: TGTGGAGGACATGGAGTGCTCAGACACACAGGTGCAAGAGGCCGCACAGACCCGTTCCAGGAGGCAGCAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| CDS CAA 72 bp | TGCAGCCCGCCGCTGGCTGAGACATGCTTCCATGTATaGCTCCTTGGGACTCCACACTTCGGGTCTGTGCGG | + |
|
Preference number: 6 (lower is better) Translates to: CSPPLAETCFHV*LLGTPHFGSVR Trigger: CCGCACAGACCCGAAGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCGGGCTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
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| CDS GCA 72 bp | CCTTGGGACTCCACACTTCGGGTCTGTGCGGCCTCTTaGACCTGTGTGTCTGAGCACTCCATGTCCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: PWDSTLRVCAAS*TCVSEHSMSST Trigger: TGTGGAGGACATGGAGTGCTCAGACACACAGGTGCAAGAGGCCGCACAGACCCGAAGTGTGGAGTCCCAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
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| CDS GCA 72 bp | AGCAAGGGTGGCCACTTACGGGTCTGTGCGGCCTCTTaGACCTGTGTGTCTGAGCACTCCATGTCCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SKGGHLRVCAAS*TCVSEHSMSST Trigger: TGTGGAGGACATGGAGTGCTCAGACACACAGGTGCAAGAGGCCGCACAGACCCGTAAGTGGCCACCCTTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000221312.2 |
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| CDS CAA 72 bp | CGCCGCTGGCTGAGACATGCTTCCATGTATTGCTCCTaGGGACTCCACACTTCGGGTCTGTGCGGCCTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RRWLRHASMYCS*GLHTSGLCGLL Trigger: CAAGAGGCCGCACAGACCCGAAGTGTGGAGTCCCAAGGAGCAATACATGGAAGCATGTCTCAGCCAGCGGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021539.16 ENSMUST00000220629.2 |
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| CDS TCA 72 bp | TCCAAATCACCACGTCTTGATGGGGCCACGCCTTTGTaGGCGTCGATGCTGGTGAACTCCAGGGTGCCGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SKSPRLDGATPL*ASMLVNSRVPS Trigger: TGACGGCACCCTGGAGTTCACCAGCATCGACGCTCACAAAGGCGTGGCCCCATCAAGACGTGGTGATTTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021539.16 ENSMUST00000072040.7 ENSMUST00000085026.12 ENSMUST00000220629.2 ENSMUST00000221312.2 |
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| CDS GCA 72 bp | AGCCTTAGCATGTCTTGTTCCAATCCCAAATGCTGCTaGCTCCTGGAACGGGTCTGTGCGGCCTCTTGCACC | + |
|
Preference number: 6 (lower is better) Translates to: SLSMSCSNPKCC*LLERVCAASCT Trigger: GGTGCAAGAGGCCGCACAGACCCGTTCCAGGAGGCAGCAGCATTTGGGATTGGAACAAGACATGCTAAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| CDS GCA 72 bp | CGGTCTAGCCTTAGCATGTCTTGTTCCAATCCCAAATaGTGCTGCCTCCTGGAACGGGTCTGTGCGGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RSSLSMSCSNPK*CCLLERVCAAS Trigger: AGAGGCCGCACAGACCCGTTCCAGGAGGCAGCAGCATTTGGGATTGGAACAAGACATGCTAAGGCTAGACCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| CDS CCA 72 bp | GCATGTCTTGTTCCAATCCCAAATGCTGCTGCCTCCTaGAACGGGTCTGTGCGGCCTCTTGCACCTGTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: ACLVPIPNAAAS*NGSVRPLAPVC Trigger: ACACACAGGTGCAAGAGGCCGCACAGACCCGTTCCAGGAGGCAGCAGCATTTGGGATTGGAACAAGACATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000085026.12 |
||
| CDS GCA 72 bp | TTCTTTCTGGTTCGTGAACGGGTCTGTGCGGCCTCTTaGACCTGTGTGTCTGAGCACTCCATGTCCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: FFLVRERVCAAS*TCVSEHSMSST Trigger: TGTGGAGGACATGGAGTGCTCAGACACACAGGTGCAAGAGGCCGCACAGACCCGTTCACGAACCAGAAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072040.7 |
||
| CDS CAA 72 bp | CACAGGGCGCGTCACTGCCAACCGGTTTGGAAGAATTaGTGTCCGCCAGATAGATGCAGCCAAAGCCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: HRARHCQPVWKN*CPPDRCSQSHL Trigger: AAGGTGGCTTTGGCTGCATCTATCTGGCGGACACAAATTCTTCCAAACCGGTTGGCAGTGACGCGCCCTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021539.16 ENSMUST00000072040.7 ENSMUST00000085026.12 ENSMUST00000220629.2 ENSMUST00000221312.2 |
||
| CDS CCA 72 bp | CTTTCACAACACAGGGCGCGTCACTGCCAACCGGTTTaGAAGAATTTGTGTCCGCCAGATAGATGCAGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LSQHRARHCQPV*KNLCPPDRCSQ Trigger: TTGGCTGCATCTATCTGGCGGACACAAATTCTTCCAAACCGGTTGGCAGTGACGCGCCCTGTGTTGTGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021539.16 ENSMUST00000072040.7 ENSMUST00000085026.12 ENSMUST00000220629.2 ENSMUST00000221312.2 |
||
| CDS GCA 72 bp | CAACCGGTTTGGAAGAATTTGTGTCCGCCAGATAGATaGAGCCAAAGCCACCTTGGCCAATGGGCAATCCTA | + |
|
Preference number: 6 (lower is better) Translates to: QPVWKNLCPPDR*SQSHLGQWAIL Trigger: TAGGATTGCCCATTGGCCAAGGTGGCTTTGGCTGCATCTATCTGGCGGACACAAATTCTTCCAAACCGGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000021539.16 ENSMUST00000072040.7 ENSMUST00000085026.12 ENSMUST00000220629.2 ENSMUST00000221312.2 ENSMUST00000221485.2 |
||
| CDS CCA 72 bp | GAGGCCTTGATGTCCCCGTGCACGTACTCATGCTCATaGATGTACTCCAGGATATCCAGAATTCTTAAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: EALMSPCTYSCS*MYSRISRILKL Trigger: AAGCTTAAGAATTCTGGATATCCTGGAGTACATCCATGAGCATGAGTACGTGCACGGGGACATCAAGGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021539.16 ENSMUST00000072040.7 ENSMUST00000085026.12 ENSMUST00000220629.2 ENSMUST00000221312.2 |
||
| CDS TCA 72 bp | GATCTTTCAAGTTATCTTCCCAAGGAAGACAGCCGCTaGGCCACTGGATCATGCAATAACCAAGTATTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: DLSSYLPKEDSR*ATGSCNNQVFP Trigger: TGGAAATACTTGGTTATTGCATGATCCAGTGGCTCAGCGGCTGTCTTCCTTGGGAAGATAACTTGAAAGATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021539.16 ENSMUST00000072040.7 ENSMUST00000085026.12 ENSMUST00000220629.2 ENSMUST00000221312.2 |
||
| CDS CCA 72 bp | TTTGGGATCTTCCTTGTACTCTTTATGAACTCCATCTaGGCAGTACCGATAAGCAAGGCCATAGTCTACCAA | + |
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Preference number: 6 (lower is better) Translates to: FGIFLVLFMNSI*AVPISKAIVYQ Trigger: TTGGTAGACTATGGCCTTGCTTATCGGTACTGCCCAGATGGAGTTCATAAAGAGTACAAGGAAGATCCCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000021539.16 ENSMUST00000072040.7 ENSMUST00000085026.12 ENSMUST00000220629.2 ENSMUST00000221312.2 |
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| CDS CAA 72 bp | TTCACACTTCCGTTCTCCACAGCACTAAAATCCAGTTaGCCGTCGTCTTTACTTCCTATAGCTTTTAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: FTLPFSTALKSS*PSSLLPIAFSP Trigger: AGGACTAAAAGCTATAGGAAGTAAAGACGACGGCAAACTGGATTTTAGTGCTGTGGAGAACGGAAGTGTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021539.16 ENSMUST00000072040.7 ENSMUST00000085026.12 ENSMUST00000220629.2 ENSMUST00000221312.2 |
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