Pregenerated sensors for VPS9D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001062Ensembl transcript IDs: ENSMUST00000117643.9, ENSMUST00000118279.2, ENSMUST00000122363.8, ENSMUST00000155869.8
Found 349 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGGCTGCCGTCTGCCTCTCTGTCCAAGGGGCCTGAGTGGAGTGTaGGGACAGAGGGCGTGGGAGGAGGTCCATCCAGCACTCGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: LGCRLPLCPRGLSGV*GQRAWEEVHPALVG Trigger: CCCCACGAGTGCTGGATGGACCTCCTCCCACGCCCTCTGTCCCCACACTCCACTCAGGCCCCTTGGACAGAGAGGCAGACGGCAGCCCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR CCA 90 bp | ACACCAGCTGGGGGAGGCCGCTTCTCAGCACCACGAAGGACAGGATaGGCAGCAAGTCATCAGCACCGATGGCAGCGGCAGGGGGCTGGG | + |
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Preference number: 1 (lower is better) Translates to: TPAGGGRFSAPRRTG*AASHQHRWQRQGAG Trigger: CCCAGCCCCCTGCCGCTGCCATCGGTGCTGATGACTTGCTGCCCATCCTGTCCTTCGTGGTGCTGAGAAGCGGCCTCCCCCAGCTGGTGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR CCA 90 bp | GAGTGTGGGGACAGAGGGCGTGGGAGGAGGTCCATCCAGCACTCGTaGGGCTGCACTGGGCTCGGAGGGGGAAAGCATGCAGTAGAGGCT | + |
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Preference number: 1 (lower is better) Translates to: ECGDRGRGRRSIQHS*GCTGLGGGKHAVEA Trigger: AGCCTCTACTGCATGCTTTCCCCCTCCGAGCCCAGTGCAGCCCCACGAGTGCTGGATGGACCTCCTCCCACGCCCTCTGTCCCCACACTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR TCA 90 bp | TCAGCACCACGAAGGACAGGATGGGCAGCAAGTCATCAGCACCGCTaGTGGCAGCGGCAGGGGGCTGGGATTCACCCTCAGGCCTGGCCT | + |
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Preference number: 1 (lower is better) Translates to: SAPRRTGWAASHQHR*WQRQGAGIHPQAWP Trigger: AGGCCAGGCCTGAGGGTGAATCCCAGCCCCCTGCCGCTGCCATCAGCGGTGCTGATGACTTGCTGCCCATCCTGTCCTTCGTGGTGCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
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| 3UTR GCA 90 bp | GGGCCAGCAGCAGGGGCCACAGTGGGGAGAAGAAGGGCTCCTCGATaGAGGCCAGGCAGCGGTCTTTGGAGGTGGCTGTGTTCAGGCTTT | + |
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Preference number: 1 (lower is better) Translates to: GPAAGATVGRRRAPR*RPGSGLWRWLCSGF Trigger: AAAGCCTGAACACAGCCACCTCCAAAGACCGCTGCCTGGCCTGCATCGAGGAGCCCTTCTTCTCCCCACTGTGGCCCCTGCTGCTGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR CCA 90 bp | CCCACACCAGATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTaGTCTGTGAGGTCCAGCCACCACTACTTGTCCAGCCGTCCCCGG | + |
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Preference number: 1 (lower is better) Translates to: PTPDMQCSVEVPWLL*SVRSSHHYLSSRPR Trigger: CCGGGGACGGCTGGACAAGTAGTGGTGGCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATCTGGTGTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
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| 3UTR CCA 90 bp | TCAGCACCACGAAGGACAGGATGGGCAGCAAGTCATCAGCACCGATaGCAGCGGCAGGGGGCTGGGATTCACCCTCAGGCCTGGCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: SAPRRTGWAASHQHR*QRQGAGIHPQAWPL Trigger: AAGAGGCCAGGCCTGAGGGTGAATCCCAGCCCCCTGCCGCTGCCATCGGTGCTGATGACTTGCTGCCCATCCTGTCCTTCGTGGTGCTGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR TCA 90 bp | GCCTGGCCTCTTGGGCACGGCAGTAGTCTTCTGCACAGATGCAGATaGCCCGCAGCGTCCGCACGATGCACTCGAGCTTCTTCTGAGGGC | + |
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Preference number: 1 (lower is better) Translates to: AWPLGHGSSLLHRCR*PAASARCTRASSEG Trigger: GCCCTCAGAAGAAGCTCGAGTGCATCGTGCGGACGCTGCGGGTCATCTGCATCTGTGCAGAAGACTACTGCCGTGCCCAAGAGGCCAGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR GCA 90 bp | GGATTCACCCTCAGGCCTGGCCTCTTGGGCACGGCAGTAGTCTTCTaGACAGATGCAGATGACCCGCAGCGTCCGCACGATGCACTCGAG | + |
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Preference number: 1 (lower is better) Translates to: GFTLRPGLLGTAVVF*TDADDPQRPHDALE Trigger: CTCGAGTGCATCGTGCGGACGCTGCGGGTCATCTGCATCTGTGCAGAAGACTACTGCCGTGCCCAAGAGGCCAGGCCTGAGGGTGAATCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR CCA 90 bp | TGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTCTaGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCAC | + |
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Preference number: 1 (lower is better) Translates to: CRLPRERQLDFSYGV*GRPDSASHALLKRH Trigger: GTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| 3UTR CCA 90 bp | GTGGGGAGAAGAAGGGCTCCTCGATGCAGGCCAGGCAGCGGTCTTTaGAGGTGGCTGTGTTCAGGCTTTCGAAGGCCAAAAGGGTCAGCG | + |
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Preference number: 1 (lower is better) Translates to: VGRRRAPRCRPGSGL*RWLCSGFRRPKGSA Trigger: CGCTGACCCTTTTGGCCTTCGAAAGCCTGAACACAGCCACCTCCAAAGACCGCTGCCTGGCCTGCATCGAGGAGCCCTTCTTCTCCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR GCA 90 bp | TACCACAGCAAGCTGGCCTTCAGTGTCCCCACACCAGATATGCAGTaGAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: YHSKLAFSVPTPDMQ*SVEVPWLLWSVRSS Trigger: GCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATCTGGTGTGGGGACACTGAAGGCCAGCTTGCTGTGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| 3UTR TCA 90 bp | AATCAAGTACCCCTCATGAGTGAACTCTTCCAGGGCCGCACACTCTaGCACCAGCTGGGGGAGGCCGCTTCTCAGCACCACGAAGGACAG | + |
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Preference number: 1 (lower is better) Translates to: NQVPLMSELFQGRTL*HQLGEAASQHHEGQ Trigger: CTGTCCTTCGTGGTGCTGAGAAGCGGCCTCCCCCAGCTGGTGTCAGAGTGTGCGGCCCTGGAAGAGTTCACTCATGAGGGGTACTTGATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
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| 3UTR CCA 90 bp | AGAAGAAGGGCTCCTCGATGCAGGCCAGGCAGCGGTCTTTGGAGGTaGCTGTGTTCAGGCTTTCGAAGGCCAAAAGGGTCAGCGAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: RRRAPRCRPGSGLWR*LCSGFRRPKGSARA Trigger: TGCTCTCGCTGACCCTTTTGGCCTTCGAAAGCCTGAACACAGCCACCTCCAAAGACCGCTGCCTGGCCTGCATCGAGGAGCCCTTCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR TCA 90 bp | GGGAGAGCAGGCTGGTCACTAGCGACAGGTCTCCTGGACTCCGCTTaGGCTTGGCTCTCCAGTGTTTTGGCCAGTCATGGTCTTGCTCAT | + |
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Preference number: 1 (lower is better) Translates to: GRAGWSLATGLLDSA*AWLSSVLASHGLAH Trigger: ATGAGCAAGACCATGACTGGCCAAAACACTGGAGAGCCAAGCTCAAGCGGAGTCCAGGAGACCTGTCGCTAGTGACCAGCCTGCTCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR GCA 90 bp | GGCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTaGTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCC | + |
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Preference number: 1 (lower is better) Translates to: GLGSDTRASKSKQGS*YLVNKQYSLTLPTP Trigger: GGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| 3UTR TCA 90 bp | ATGTCAGACAATACCCTTCTTCTCCAATCAAGTACCCCTCATGAGTaGACTCTTCCAGGGCCGCACACTCTGACACCAGCTGGGGGAGGC | + |
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Preference number: 1 (lower is better) Translates to: MSDNTLLLQSSTPHE*TLPGPHTLTPAGGG Trigger: GCCTCCCCCAGCTGGTGTCAGAGTGTGCGGCCCTGGAAGAGTTCACTCATGAGGGGTACTTGATTGGAGAAGAAGGGTATTGTCTGACAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
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| 3UTR TCA 90 bp | CCGTCCCCGGGACAGAAGTTCCACATAGCTCAGGGCGCTCTGCAGTaGTGTCAGACAATACCCTTCTTCTCCAATCAAGTACCCCTCATG | + |
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Preference number: 1 (lower is better) Translates to: PSPGQKFHIAQGALQ*CQTIPFFSNQVPLM Trigger: CATGAGGGGTACTTGATTGGAGAAGAAGGGTATTGTCTGACATCACTGCAGAGCGCCCTGAGCTATGTGGAACTTCTGTCCCGGGGACGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
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| 3UTR CCA 90 bp | AAAAACTGTTCCAGATCCTCAAAGGAGCTGTCCTTGTCTGGCAGGTaGGATAAAGCATCTACTAGGGGTGAGGAGGGCCCTGCTGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: KNCSRSSKELSLSGR*DKASTRGEEGPAGL Trigger: CAGCCCAGCAGGGCCCTCCTCACCCCTAGTAGATGCTTTATCCCACCTGCCAGACAAGGACAGCTCCTTTGAGGATCTGGAACAGTTTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR TCA 90 bp | AGTGATGTCAGACAATACCCTTCTTCTCCAATCAAGTACCCCTCATaGGTGAACTCTTCCAGGGCCGCACACTCTGACACCAGCTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: SDVRQYPSSPIKYPS*VNSSRAAHSDTSWG Trigger: CCCCCAGCTGGTGTCAGAGTGTGCGGCCCTGGAAGAGTTCACTCATGAGGGGTACTTGATTGGAGAAGAAGGGTATTGTCTGACATCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
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| 3UTR GCA 90 bp | GTCCTTGACTGTGCTCTTCAGACACTCCAACAAGGGTTCCCTCTTTaGTCCTGGGGTCTGAGGCTCAGACATAGCCAAAAACTGTTCCAG | + |
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Preference number: 1 (lower is better) Translates to: VLDCALQTLQQGFPL*SWGLRLRHSQKLFQ Trigger: CTGGAACAGTTTTTGGCTATGTCTGAGCCTCAGACCCCAGGAGCAAAGAGGGAACCCTTGTTGGAGTGTCTGAAGAGCACAGTCAAGGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR CCA 90 bp | GACTGTGCTCTTCAGACACTCCAACAAGGGTTCCCTCTTTGCTCCTaGGGTCTGAGGCTCAGACATAGCCAAAAACTGTTCCAGATCCTC | + |
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Preference number: 1 (lower is better) Translates to: DCALQTLQQGFPLCS*GLRLRHSQKLFQIL Trigger: GAGGATCTGGAACAGTTTTTGGCTATGTCTGAGCCTCAGACCCCAGGAGCAAAGAGGGAACCCTTGTTGGAGTGTCTGAAGAGCACAGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR TCA 90 bp | CTCTTCAGACACTCCAACAAGGGTTCCCTCTTTGCTCCTGGGGTCTaGGGCTCAGACATAGCCAAAAACTGTTCCAGATCCTCAAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: LFRHSNKGSLFAPGV*GSDIAKNCSRSSKE Trigger: CTCCTTTGAGGATCTGGAACAGTTTTTGGCTATGTCTGAGCCTCAGACCCCAGGAGCAAAGAGGGAACCCTTGTTGGAGTGTCTGAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR TCA 90 bp | TCGAAGGCCAAAAGGGTCAGCGAGAGCAGTCTATCAATGGCATTGTaGATGTCCTTGACTGTGCTCTTCAGACACTCCAACAAGGGTTCC | + |
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Preference number: 1 (lower is better) Translates to: SKAKRVSESSLSMAL*MSLTVLFRHSNKGS Trigger: GGAACCCTTGTTGGAGTGTCTGAAGAGCACAGTCAAGGACATTCACAATGCCATTGATAGACTGCTCTCGCTGACCCTTTTGGCCTTCGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR CCA 90 bp | CTAACAAGAAACTGGCTCACACAAACTTGGGCTGTCTCAGGAGACTaGAGGCATGTAAAACTAGATTGGCCCGGCAAGGTTCCCAATACC | + |
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Preference number: 1 (lower is better) Translates to: LTRNWLTQTWAVSGD*RHVKLDWPGKVPNT Trigger: GGTATTGGGAACCTTGCCGGGCCAATCTAGTTTTACATGCCTCCAGTCTCCTGAGACAGCCCAAGTTTGTGTGAGCCAGTTTCTTGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCTTCCAGGGCCGCACACTCTGACACCAGCTGGGGGAGGCCGCTTCTCAGCACAGGGCCGCACACTCTaGCACCAGCTGGGGGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: TLPGPHTLTPAGGGRFSAQGRTL*HQLGEA Trigger: GGCCTCCCCCAGCTGGTGTCAGAGTGTGCGGCCCTG...TGCTGAGAAGCGGCCTCCCCCAGCTGGTGTCAGAGTGTGCGGCCCTGGAAGAGT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
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| 3UTR-3UTR TCA 90 bp | GCGTTCCTGTACAGCTCCATGCTCCTGCTTACAGCGGCCTCCCGGGTACGGTGCGGTCTGGGGCAGGCCTaGCTCAGCCAGCCATGCCCT | + |
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Preference number: 2 (lower is better) Translates to: AFLYSSMLLLTAASRVRCGLGQA*LSQPCP Trigger: AGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGACC...GCACCGTACCCGGGAGGCCGCTGTAAGCAGGAGCATGGAGCTGTACAGGAACGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGGTGCGTTCCTGTACAGCTCCATGCTCCTGCTTACAGCGGCCTCCCGGGTGAGGCCGTTGGCTTCTaGGGGCAGGGAGCAGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: RGCVPVQLHAPAYSGLPGEAVGF*GQGAAA Trigger: GGCAGCTGCTCCCTGCCCCCAGAAGCCAACGGCCTC...ACCCGGGAGGCCGCTGTAAGCAGGAGCATGGAGCTGTACAGGAACGCACCCCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR-3UTR CCA 90 bp | GTCATCAGCACCGATGGCAGCGGCAGGGGGCTGGGATTCACCCTCAGGCCTGGCCTCGTGGGAGGAGCTTaGTGGGGATGCCTAGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VISTDGSGRGLGFTLRPGLVGGA*WGCLGL Trigger: CAGCCCTAGGCATCCCCACCAAGCTCCTCCCACGAG...GCCAGGCCTGAGGGTGAATCCCAGCCCCCTGCCGCTGCCATCGGTGCTGATGAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGCACCGATGGCAGCGGCAGGGGGCTGGGATTCACCCTCAGGCCTGGCCTCTTTCTCCTATGGGGTCTaGGGCAGGCCTGACTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: SAPMAAAGGWDSPSGLASFSYGV*GRPDSA Trigger: GGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAA...AGAGGCCAGGCCTGAGGGTGAATCCCAGCCCCCTGCCGCTGCCATCGGTGCTGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR CAA 90 bp | GATGGCAGCGGCAGGGGGCTGGGATTCACCCTCAGGCCTGGCCTCTaGGGCACGGCAGTAGTCTTCTGCACAGATGCAGATGACCCGCAG | + |
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Preference number: 2 (lower is better) Translates to: DGSGRGLGFTLRPGL*GTAVVFCTDADDPQ Trigger: CTGCGGGTCATCTGCATCTGTGCAGAAGACTACTGCCGTGCCCAAGAGGCCAGGCCTGAGGGTGAATCCCAGCCCCCTGCCGCTGCCATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCCGCACACTCTGACACCAGCTGGGGGAGGCCGCTTCTCAGCACCACGAAGGCAAGGGTTCCCTCTTTaGTCCTGGGGTCTGAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: GPHTLTPAGGGRFSAPRRQGFPL*SWGLRL Trigger: GAGCCTCAGACCCCAGGAGCAAAGAGGGAACCCTTG...CCTTCGTGGTGCTGAGAAGCGGCCTCCCCCAGCTGGTGTCAGAGTGTGCGGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTACCTGGGCCTGAGTGGAGTGTaGGGACAGAGGGCGTGGGAG | + |
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Preference number: 2 (lower is better) Translates to: GLGSDTRASKSKQGSCYLGLSGV*GQRAWE Trigger: CTCCCACGCCCTCTGTCCCCACACTCCACTCAGGCC...CAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR-3UTR CCA 90 bp | GCGTTCCTGTACAGCTCCATGCTCCTGCTTACAGCGGCCTCCCGGGTACGGTGCCAGCAGGGGCCACAGTaGGGAGAAGAAGGGCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: AFLYSSMLLLTAASRVRCQQGPQ*GEEGLL Trigger: GAGGAGCCCTTCTTCTCCCCACTGTGGCCCCTGCTG...GCACCGTACCCGGGAGGCCGCTGTAAGCAGGAGCATGGAGCTGTACAGGAACGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR-3UTR GCA 90 bp | TCAGCACCGATGGCAGCGGCAGGGGGCTGGGATTCACCCTCAGGCCTGGCCTCTACGGCAGTAGTCTTCTaGACAGATGCAGATGACCCG | + |
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Preference number: 2 (lower is better) Translates to: SAPMAAAGGWDSPSGLASTAVVF*TDADDP Trigger: CGGGTCATCTGCATCTGTGCAGAAGACTACTGCCGT...AGAGGCCAGGCCTGAGGGTGAATCCCAGCCCCCTGCCGCTGCCATCGGTGCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR-3UTR CCA 90 bp | CGGCAGCTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATCTCATAACCCAGGCCTaGGCAGTGACACCCGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: RQLDFSYGVWGRPDSASHLITQA*AVTPGP Trigger: TGGCCCGGGTGTCACTGCCCAGGCCTGGGTTATGAG...ATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAGCTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| 3UTR-3UTR TCA 90 bp | ACCACTACTTGTCCAGCCGTCCCCGGGACAGAAGTTCCACATAGCTCAGGGCGCGGTGATCAGGAAGGCTaGGCAAGTGGGAGAGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: TTTCPAVPGTEVPHSSGRGDQEG*ASGRAG Trigger: GCCTGCTCTCCCACTTGCTCAGCCTTCCTGATCACC...GCGCCCTGAGCTATGTGGAACTTCTGTCCCGGGGACGGCTGGACAAGTAGTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCTTCCAGGGCCGCACACTCTGACACCAGCTGGGGGAGGCCGCTTCTCAGCAAGAGCCATCAATCAGTaGTGCAGGCTCCCCAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: TLPGPHTLTPAGGGRFSARAINQ*CRLPRE Trigger: TTCCCTGGGGAGCCTGCAGCACTGATTGATGGCTCT...TGCTGAGAAGCGGCCTCCCCCAGCTGGTGTCAGAGTGTGCGGCCCTGGAAGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
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| 3UTR-3UTR GCA 90 bp | ACTCTTCCAGGGCCGCACACTCTGACACCAGCTGGGGGAGGCCGCTTCTCAGCATACCCCAGTGGGGGCTaGCTAGTGTCCATGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: TLPGPHTLTPAGGGRFSAYPSGG*LVSMRR Trigger: TCTTCTCATGGACACTAGGCAGCCCCCACTGGGGTA...TGCTGAGAAGCGGCCTCCCCCAGCTGGTGTCAGAGTGTGCGGCCCTGGAAGAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTTGGTAGGAGAAAGGCTCATAACCCAGGCCTGGGCAGTGACACCCGGGCCAATTCACCCTCAGGCCTaGCCTCTTGGGCACGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: TLVGERLITQAWAVTPGPIHPQA*PLGHGS Trigger: ACTGCCGTGCCCAAGAGGCCAGGCCTGAGGGTGAAT...TGGCCCGGGTGTCACTGCCCAGGCCTGGGTTATGAGCCTTTCTCCTACCAAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTTGGTAGGAGAAAGGCTCATAACCCAGGCCTGGGCAGTGACACCCGGGCCATTCTCCTATGGGGTCTaGGGCAGGCCTGACTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: TLVGERLITQAWAVTPGPFSYGV*GRPDSA Trigger: GGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAA...TGGCCCGGGTGTCACTGCCCAGGCCTGGGTTATGAGCCTTTCTCCTACCAAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| 3UTR CAA 90 bp | AGTGGGGAGAAGAAGGGCTCCTCGATGCAGGCCAGGCAGCGGTCTTaGGAGGTGGCTGTGTTCAGGCTTTCGAAGGCCAAAAGGGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: SGEKKGSSMQARQRS*EVAVFRLSKAKRVS Trigger: GCTGACCCTTTTGGCCTTCGAAAGCCTGAACACAGCCACCTCCAAAGACCGCTGCCTGGCCTGCATCGAGGAGCCCTTCTTCTCCCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR-3UTR TCA 90 bp | GTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTTACCCATTTCTGTGCTaGTACCCCAGTGGGGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: VWGRPDSASHALLKRHCPYPFLC*YPSGGC Trigger: GCAGCCCCCACTGGGGTATCAGCACAGAAATGGGTA...AGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| 3UTR-3UTR TCA 90 bp | ACCTTGGTAGGAGAAAGGCTCATAACCCAGGCCTGGGCAGTGACACCCGGGCCATACCCATTTCTGTGCTaGTACCCCAGTGGGGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: TLVGERLITQAWAVTPGPYPFLC*YPSGGC Trigger: GCAGCCCCCACTGGGGTATCAGCACAGAAATGGGTA...TGGCCCGGGTGTCACTGCCCAGGCCTGGGTTATGAGCCTTTCTCCTACCAAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| 3UTR-3UTR TCA 90 bp | GGCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTACCTGAGCTGGGAGATTGGGTaGTCAGGAAGGCTGAGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: GLGSDTRASKSKQGSCYLSWEIG*SGRLSK Trigger: CTTGCTCAGCCTTCCTGATCACCCAATCTCCCAGCT...CAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCCACCACTACTTGTCCAGCCGCCACGAAGGACAGGATaGGCAGCAAGTCATCAGCAC | + |
|
Preference number: 2 (lower is better) Translates to: GPVAPLVCEVQPPLLVQPPRRTG*AASHQH Trigger: GTGCTGATGACTTGCTGCCCATCCTGTCCTTCGTGG...CGGCTGGACAAGTAGTGGTGGCTGGACCTCACAGACCAAAGGAGCCACGGGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
||
| 3UTR-3UTR CCA 90 bp | CAATCAGTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTCACTCTGACACCAGCTaGGGGAGGCCGCTTCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: QSVLQAPQGTAARFLLWGHSDTS*GRPLLS Trigger: GCTGAGAAGCGGCCTCCCCCAGCTGGTGTCAGAGTG...ACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCACTGATTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCTTGGTAGGAGAAAGGCTCATAACCCAGGCCTGGGCAGTGACACCCGGGCCACTACACCCAGTTCTCTaGGGGCAGGGTAAAGCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: TLVGERLITQAWAVTPGPLHPVL*GQGKAH Trigger: GTGGGCTTTACCCTGCCCCCAGAGAACTGGGTGTAG...TGGCCCGGGTGTCACTGCCCAGGCCTGGGTTATGAGCCTTTCTCCTACCAAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTGGGGGAGGCCGCTTCTCAGCACCACGAAGGACAGGATGGGCAGCAAGTCGGCTCTCCAGTGTTTTaGCCAGTCATGGTCTTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: QLGEAASQHHEGQDGQQVGSPVF*PVMVLL Trigger: GAGCAAGACCATGACTGGCCAAAACACTGGAGAGCC...GACTTGCTGCCCATCCTGTCCTTCGTGGTGCTGAGAAGCGGCCTCCCCCAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCAGGGCGCTCTGCAGTGATGTCAGACAATACCCTTCTTCTCCAATCAAGTACCAGGGCCGCACACTCTaGCACCAGCTGGGGGAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: LRALCSDVRQYPSSPIKYQGRTL*HQLGEA Trigger: GGCCTCCCCCAGCTGGTGTCAGAGTGTGCGGCCCTG...GTACTTGATTGGAGAAGAAGGGTATTGTCTGACATCACTGCAGAGCGCCCTGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
||
| 3UTR-3UTR TCA 90 bp | GGCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTACCTGATCAAGTACCCCTCATaGGTGAACTCTTCCAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: GLGSDTRASKSKQGSCYLIKYPS*VNSSRA Trigger: GGCCCTGGAAGAGTTCACTCATGAGGGGTACTTGAT...CAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTGAACATATTTCACTGTCCCCAACCAAGATAAGCCCAGGGCAGGATGTCCTGCCCAGGCCTGGGCAGTaGCACCCGGGCCAGCAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: PEHISLSPTKISPGQDVLPRPGQ*HPGQQK Trigger: CTTTTGCTGGCCCGGGTGTCACTGCCCAGGCCTGGG...CAGGACATCCTGCCCTGGGCTTATCTTGGTTGGGGACAGTGAAATATGTTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| 3UTR-3UTR GCA 90 bp | CGGCAGCTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATTACCCCAGTGGGGGCTaGCTAGTGTCCATGAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: RQLDFSYGVWGRPDSASHYPSGG*LVSMRR Trigger: TCTTCTCATGGACACTAGGCAGCCCCCACTGGGGTA...ATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAGCTGCCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| 3UTR-3UTR GCA 90 bp | TCCTTGACTGTGCTCTTCAGACACTCCAACAAGGGTTCCCTCTTTGCTCCTGGGAGGGCCCTGCTGGGCTaGCGTCTGCCTCTCTGTCCA | + |
|
Preference number: 2 (lower is better) Translates to: SLTVLFRHSNKGSLFAPGRALLG*RLPLCP Trigger: TGGACAGAGAGGCAGACGGCAGCCCAGCAGGGCCCT...CCCAGGAGCAAAGAGGGAACCCTTGTTGGAGTGTCTGAAGAGCACAGTCAAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGCACCGATGGCAGCGGCAGGGGGCTGGGATTCACCCTCAGGCCTGGCCTCTTGTTTTGGCCAGTCATaGTCTTGCTCATACTCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SAPMAAAGGWDSPSGLASCFGQS*SCSYSK Trigger: CTTGGAGTATGAGCAAGACCATGACTGGCCAAAACA...AGAGGCCAGGCCTGAGGGTGAATCCCAGCCCCCTGCCGCTGCCATCGGTGCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR CAA 90 bp | TGGGAGAGCAGGCTGGTCACTAGCGACAGGTCTCCTGGACTCCGCTaGAGCTTGGCTCTCCAGTGTTTTGGCCAGTCATGGTCTTGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: WESRLVTSDRSPGLR*SLALQCFGQSWSCS Trigger: TGAGCAAGACCATGACTGGCCAAAACACTGGAGAGCCAAGCTCAAGCGGAGTCCAGGAGACCTGTCGCTAGTGACCAGCCTGCTCTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR-3UTR TCA 90 bp | GGGGGTGCGTTCCTGTACAGCTCCATGCTCCTGCTTACAGCGGCCTCCCGGGTACTATCAATGGCATTGTaGATGTCCTTGACTGTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: GGAFLYSSMLLLTAASRVLSMAL*MSLTVL Trigger: GAGCACAGTCAAGGACATTCACAATGCCATTGATAG...TACCCGGGAGGCCGCTGTAAGCAGGAGCATGGAGCTGTACAGGAACGCACCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR-3UTR CCA 90 bp | GATCCTCAAAGGAGCTGTCCTTGTCTGGCAGGTGGGATAAAGCATCTACTAGGGCACTCTGACACCAGCTaGGGGAGGCCGCTTCTCAGC | + |
|
Preference number: 2 (lower is better) Translates to: DPQRSCPCLAGGIKHLLGHSDTS*GRPLLS Trigger: GCTGAGAAGCGGCCTCCCCCAGCTGGTGTCAGAGTG...CCCTAGTAGATGCTTTATCCCACCTGCCAGACAAGGACAGCTCCTTTGAGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR-3UTR GCA 90 bp | ACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCCACTTGGGCCTCCAGGACAGATaGATGGTAAAGAAGGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: TASHYLHPVLWGQGKAHLGLQDR*MVKKVS Trigger: GCTCACCTTCTTTACCATGCATCTGTCCTGGAGGCC...CAAGTGGGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGAACATATTTCACTGTCCCCAACCAAGATAAGCCCAGGGCAGGATGTCCTGAGAAGGGCTCCTCGATaGAGGCCAGGCAGCGGTCTT | + |
|
Preference number: 2 (lower is better) Translates to: PEHISLSPTKISPGQDVLRRAPR*RPGSGL Trigger: AAGACCGCTGCCTGGCCTGCATCGAGGAGCCCTTCT...CAGGACATCCTGCCCTGGGCTTATCTTGGTTGGGGACAGTGAAATATGTTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGAACATATTTCACTGTCCCCAACCAAGATAAGCCCAGGGCAGGATGTCCTGGTCCCGTGGCTCCTTTaGTCTGTGAGGTCCAGCCAC | + |
|
Preference number: 2 (lower is better) Translates to: PEHISLSPTKISPGQDVLVPWLL*SVRSSH Trigger: GTGGCTGGACCTCACAGACCAAAGGAGCCACGGGAC...CAGGACATCCTGCCCTGGGCTTATCTTGGTTGGGGACAGTGAAATATGTTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCTTCTCCTATGGGGTCTaGGGCAGGCCTGACTCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: QGSCYLVNKQYSLTLPTPFSYGV*GRPDSA Trigger: GGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAA...GGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| 3UTR-3UTR CCA 90 bp | CGGCAGCTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATGCTGTCTCAGGAGACTaGAGGCATGTAAAACTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: RQLDFSYGVWGRPDSASHAVSGD*RHVKLD Trigger: ATCTAGTTTTACATGCCTCCAGTCTCCTGAGACAGC...ATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAGCTGCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTGCTGTCTCAGGAGACTaGAGGCATGTAAAACTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: VWGRPDSASHALLKRHCPAVSGD*RHVKLD Trigger: ATCTAGTTTTACATGCCTCCAGTCTCCTGAGACAGC...AGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| 3UTR-3UTR CCA 90 bp | ACCTTGGTAGGAGAAAGGCTCATAACCCAGGCCTGGGCAGTGACACCCGGGCCAGCTGTCTCAGGAGACTaGAGGCATGTAAAACTAGAT | + |
|
Preference number: 2 (lower is better) Translates to: TLVGERLITQAWAVTPGPAVSGD*RHVKLD Trigger: ATCTAGTTTTACATGCCTCCAGTCTCCTGAGACAGC...TGGCCCGGGTGTCACTGCCCAGGCCTGGGTTATGAGCCTTTCTCCTACCAAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| 3UTR-3UTR CCA 90 bp | AACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCTTCCCTCTTTGCTCCTaGGGTCTGAGGCTCAGACAT | + |
|
Preference number: 2 (lower is better) Translates to: NSTASHYLHPVLWGQGKAFPLCS*GLRLRH Trigger: ATGTCTGAGCCTCAGACCCCAGGAGCAAAGAGGGAA...GGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCCACTCGAGCTTCTTCTaGGGGCAGCTCTCCAAGACC | + |
|
Preference number: 2 (lower is better) Translates to: QGSCYLVNKQYSLTLPTPHSSFF*GQLSKT Trigger: GGTCTTGGAGAGCTGCCCTCAGAAGAAGCTCGAGTG...GGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR-3UTR GCA 90 bp | CCTGAACATATTTCACTGTCCCCAACCAAGATAAGCCCAGGGCAGGATGTCCTGTACCCCAGTGGGGGCTaGCTAGTGTCCATGAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: PEHISLSPTKISPGQDVLYPSGG*LVSMRR Trigger: TCTTCTCATGGACACTAGGCAGCCCCCACTGGGGTA...CAGGACATCCTGCCCTGGGCTTATCTTGGTTGGGGACAGTGAAATATGTTCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTTTCTCCTATGGGGTCTaGGGCAGGCCTGACTCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: GSCYLVNKQYSLTLPTPSFSYGV*GRPDSA Trigger: GGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAA...ACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCCTACACCCAGTTCTCTaGGGGCAGGGTAAAGCCCAC | + |
|
Preference number: 2 (lower is better) Translates to: QGSCYLVNKQYSLTLPTPLHPVL*GQGKAH Trigger: GTGGGCTTTACCCTGCCCCCAGAGAACTGGGTGTAG...GGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| 3UTR-3UTR GCA 90 bp | GTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGGGCCTCCAGGACAGATaGATGGTAAAGAAGGTGAGC | + |
|
Preference number: 2 (lower is better) Translates to: VNKQYSLTLPTPSSLGAGGLQDR*MVKKVS Trigger: GCTCACCTTCTTTACCATGCATCTGTCCTGGAGGCC...CCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGTTCCACATAGCTCAGGGCGCTCTGCAGTGATGTCAGACAATACCCTTCTTCAGGAGCTGGGAGATTaGGTGATCAGGAAGGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: EVPHSSGRSAVMSDNTLLQELGD*VIRKAE Trigger: CTCAGCCTTCCTGATCACCCAATCTCCCAGCTCCTG...AAGAAGGGTATTGTCTGACATCACTGCAGAGCGCCCTGAGCTATGTGGAACTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| 3UTR-3UTR TCA 90 bp | GAAGTTCCACATAGCTCAGGGCGCTCTGCAGTGATGTCAGACAATACCCTTCTTATCAAGTACCCCTCATaGGTGAACTCTTCCAGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: EVPHSSGRSAVMSDNTLLIKYPS*VNSSRA Trigger: GGCCCTGGAAGAGTTCACTCATGAGGGGTACTTGAT...AAGAAGGGTATTGTCTGACATCACTGCAGAGCGCCCTGAGCTATGTGGAACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTAGAGCCATCAATCAGTaGTGCAGGCTCCCCAGGGAA | + |
|
Preference number: 2 (lower is better) Translates to: GSCYLVNKQYSLTLPTPSRAINQ*CRLPRE Trigger: TTCCCTGGGGAGCCTGCAGCACTGATTGATGGCTCT...ACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| 3UTR-3UTR GCA 90 bp | GTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGGGCCAGTCATGGTCTTaGTCATACTCCAAGATGGCA | + |
|
Preference number: 2 (lower is better) Translates to: VNKQYSLTLPTPSSLGAGGQSWS*SYSKMA Trigger: TGCCATCTTGGAGTATGAGCAAGACCATGACTGGCC...CCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR CCA 72 bp | GCAGGGAGCAGCTGCCTGGGGCAGGCGCGGCACTGGTaGCAGCCCGGCTCACAATCGGATACAGCGCACTGT | + |
|
Preference number: 3 (lower is better) Translates to: AGSSCLGQARHW*QPGSQSDTAHC Trigger: ACAGTGCGCTGTATCCGATTGTGAGCCGGGCTGCCACCAGTGCCGCGCCTGCCCCAGGCAGCTGCTCCCTGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR CCA 72 bp | AAGTCATCAGCACCGCTGATGGCAGCGGCAGGGGGCTaGGATTCACCCTCAGGCCTGGCCTCTTGGGCACGG | + |
|
Preference number: 3 (lower is better) Translates to: KSSAPLMAAAGG*DSPSGLASWAR Trigger: CCGTGCCCAAGAGGCCAGGCCTGAGGGTGAATCCCAGCCCCCTGCCGCTGCCATCAGCGGTGCTGATGACTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
||
| 3UTR CCA 72 bp | GACAGAGGGCGTGGGAGGAGGTCCATCCAGCACTCGTaGGGCTGCACTGGGCTCGGAGGGGGAAAGCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: DRGRGRRSIQHS*GCTGLGGGKHA Trigger: TGCATGCTTTCCCCCTCCGAGCCCAGTGCAGCCCCACGAGTGCTGGATGGACCTCCTCCCACGCCCTCTGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR CCA 72 bp | AGCAAGTCATCAGCACCGATGGCAGCGGCAGGGGGCTaGGATTCACCCTCAGGCCTGGCCTCTTGGGCACGG | + |
|
Preference number: 3 (lower is better) Translates to: SKSSAPMAAAGG*DSPSGLASWAR Trigger: CCGTGCCCAAGAGGCCAGGCCTGAGGGTGAATCCCAGCCCCCTGCCGCTGCCATCGGTGCTGATGACTTGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR CCA 72 bp | CGTCTGCCTCTCTGTCCAAGGGGCCTGAGTGGAGTGTaGGGACAGAGGGCGTGGGAGGAGGTCCATCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RLPLCPRGLSGV*GQRAWEEVHPA Trigger: TGCTGGATGGACCTCCTCCCACGCCCTCTGTCCCCACACTCCACTCAGGCCCCTTGGACAGAGAGGCAGACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR CCA 72 bp | CGAAGGACAGGATGGGCAGCAAGTCATCAGCACCGATaGCAGCGGCAGGGGGCTGGGATTCACCCTCAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: RRTGWAASHQHR*QRQGAGIHPQA Trigger: GGCCTGAGGGTGAATCCCAGCCCCCTGCCGCTGCCATCGGTGCTGATGACTTGCTGCCCATCCTGTCCTTCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR TCA 72 bp | CGAAGGACAGGATGGGCAGCAAGTCATCAGCACCGCTaGTGGCAGCGGCAGGGGGCTGGGATTCACCCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RRTGWAASHQHR*WQRQGAGIHPQ Trigger: CTGAGGGTGAATCCCAGCCCCCTGCCGCTGCCATCAGCGGTGCTGATGACTTGCTGCCCATCCTGTCCTTCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
||
| 3UTR TCA 72 bp | AGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTaGGGTCCAGCCACCACTACTTGTCCAGCCGTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: SAAWRSRGSFGL*GPATTTCPAVP Trigger: GGGGACGGCTGGACAAGTAGTGGTGGCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGGCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTGGTCCCGTGGCTCCTTaGGTCTGTGAGGTCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TQAWAVTPGPAKANRAVAGPVAP*VCEVQP Trigger: TGGCTGGACCTCACAGACCAAAGGAGCCACGGGACC...AGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGCCTGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| 3UTR-3UTR CAA 90 bp | TGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTAGGGGTCCCGTGGCTCCTTaGGTCTGTGAGGTCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: WGRPDSASHALLKRHCPRGPVAP*VCEVQP Trigger: TGGCTGGACCTCACAGACCAAAGGAGCCACGGGACC...CCTAGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| 3UTR GCA 72 bp | CTCAGGCCTGGCCTCTTGGGCACGGCAGTAGTCTTCTaGACAGATGCAGATGACCCGCAGCGTCCGCACTCT | + |
|
Preference number: 3 (lower is better) Translates to: LRPGLLGTAVVF*TDADDPQRPHS Trigger: AGAGTGCGGACGCTGCGGGTCATCTGCATCTGTGCAGAAGACTACTGCCGTGCCCAAGAGGCCAGGCCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
||
| 3UTR GCA 72 bp | CTCAGGCCTGGCCTCTTGGGCACGGCAGTAGTCTTCTaGACAGATGCAGATGACCCGCAGCGTCCGCACGAT | + |
|
Preference number: 3 (lower is better) Translates to: LRPGLLGTAVVF*TDADDPQRPHD Trigger: ATCGTGCGGACGCTGCGGGTCATCTGCATCTGTGCAGAAGACTACTGCCGTGCCCAAGAGGCCAGGCCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTACCTGGGACTCCGCTTGAGCTaGGCTCTCCAGTGTTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GLGSDTRASKSKQGSCYLGLRLS*ALQCFG Trigger: GCCAAAACACTGGAGAGCCAAGCTCAAGCGGAGTCC...CAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR TCA 72 bp | CTTGGGCACGGCAGTAGTCTTCTGCACAGATGCAGATaGCCCGCAGCGTCCGCACGATGCACTCGAGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LGHGSSLLHRCR*PAASARCTRAS Trigger: AGAAGCTCGAGTGCATCGTGCGGACGCTGCGGGTCATCTGCATCTGTGCAGAAGACTACTGCCGTGCCCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR GCA 72 bp | AAGCTGGCCTTCAGTGTCCCCACACCAGATATGCAGTaGAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: KLAFSVPTPDMQ*SVEVPWLLWSV Trigger: CACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATCTGGTGTGGGGACACTGAAGGCCAGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| 3UTR CCA 72 bp | GATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTaGTCTGTGAGGTCCAGCCACCACTACTTGTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: DMQCSVEVPWLL*SVRSSHHYLSS Trigger: GCTGGACAAGTAGTGGTGGCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
||
| 3UTR CCA 72 bp | GCTCCTCGATGCAGGCCAGGCAGCGGTCTTTGGAGGTaGCTGTGTTCAGGCTTTCGAAGGCCAAAAGGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: APRCRPGSGLWR*LCSGFRRPKGS Trigger: TGACCCTTTTGGCCTTCGAAAGCCTGAACACAGCCACCTCCAAAGACCGCTGCCTGGCCTGCATCGAGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR TCA 72 bp | GGCTGGTCACTAGCGACAGGTCTCCTGGACTCCGCTTaGGCTTGGCTCTCCAGTGTTTTGGCCAGTCATGGT | + |
|
Preference number: 3 (lower is better) Translates to: GWSLATGLLDSA*AWLSSVLASHG Trigger: ACCATGACTGGCCAAAACACTGGAGAGCCAAGCTCAAGCGGAGTCCAGGAGACCTGTCGCTAGTGACCAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR CCA 72 bp | AGAAGGGCTCCTCGATGCAGGCCAGGCAGCGGTCTTTaGAGGTGGCTGTGTTCAGGCTTTCGAAGGCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: RRAPRCRPGSGL*RWLCSGFRRPK Trigger: TTTTGGCCTTCGAAAGCCTGAACACAGCCACCTCCAAAGACCGCTGCCTGGCCTGCATCGAGGAGCCCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR-3UTR CAA 90 bp | GTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGGGTCCCGTGGCTCCTTaGGTCTGTGAGGTCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: VNKQYSLTLPTPSSLGAGGPVAP*VCEVQP Trigger: TGGCTGGACCTCACAGACCAAAGGAGCCACGGGACC...CCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| 3UTR TCA 72 bp | TTGGCCCGGCAAGGTTCCCAATACCCATTTCTGTGCTaGTACCCCAGTGGGGGCTGCCTAGTGTCCATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LARQGSQYPFLC*YPSGGCLVSMR Trigger: TCTCATGGACACTAGGCAGCCCCCACTGGGGTATCAGCACAGAAATGGGTATTGGGAACCTTGCCGGGCCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| 3UTR CCA 72 bp | GTTTTGGCCAGTCATGGTCTTGCTCATACTCCAAGATaGCAGCATAGAGGGCTCGCTGCTCCCGCTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VLASHGLAHTPR*QHRGLAAPAPL Trigger: CAGAGGAGCGGGAGCAGCGAGCCCTCTATGCTGCCATCTTGGAGTATGAGCAAGACCATGACTGGCCAAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR CCA 72 bp | TCCAGATCCTCAAAGGAGCTGTCCTTGTCTGGCAGGTaGGATAAAGCATCTACTAGGGGTGAGGAGGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SRSSKELSLSGR*DKASTRGEEGP Trigger: AGGGCCCTCCTCACCCCTAGTAGATGCTTTATCCCACCTGCCAGACAAGGACAGCTCCTTTGAGGATCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR CCA 72 bp | AGGTTCCCAATACCCATTTCTGTGCTGATACCCCAGTaGGGGCTGCCTAGTGTCCATGAGAAGAGGTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: RFPIPISVLIPQ*GLPSVHEKRSE Trigger: CTCTGACCTCTTCTCATGGACACTAGGCAGCCCCCACTGGGGTATCAGCACAGAAATGGGTATTGGGAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| 3UTR TCA 72 bp | CACTCCAACAAGGGTTCCCTCTTTGCTCCTGGGGTCTaGGGCTCAGACATAGCCAAAAACTGTTCCAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: HSNKGSLFAPGV*GSDIAKNCSRS Trigger: GGATCTGGAACAGTTTTTGGCTATGTCTGAGCCTCAGACCCCAGGAGCAAAGAGGGAACCCTTGTTGGAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR GCA 72 bp | TGTGCTCTTCAGACACTCCAACAAGGGTTCCCTCTTTaGTCCTGGGGTCTGAGGCTCAGACATAGCCAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: CALQTLQQGFPL*SWGLRLRHSQK Trigger: TTTTTGGCTATGTCTGAGCCTCAGACCCCAGGAGCAAAGAGGGAACCCTTGTTGGAGTGTCTGAAGAGCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR CCA 72 bp | AACTGGCTCACACAAACTTGGGCTGTCTCAGGAGACTaGAGGCATGTAAAACTAGATTGGCCCGGCAAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: NWLTQTWAVSGD*RHVKLDWPGKV Trigger: AACCTTGCCGGGCCAATCTAGTTTTACATGCCTCCAGTCTCCTGAGACAGCCCAAGTTTGTGTGAGCCAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| 3UTR CCA 72 bp | CTTCAGACACTCCAACAAGGGTTCCCTCTTTGCTCCTaGGGTCTGAGGCTCAGACATAGCCAAAAACTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LQTLQQGFPLCS*GLRLRHSQKLF Trigger: GAACAGTTTTTGGCTATGTCTGAGCCTCAGACCCCAGGAGCAAAGAGGGAACCCTTGTTGGAGTGTCTGAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTTGGCTCTCCAGTGTTTaGGCCAGTCATGGTCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GSCYLVNKQYSLTLPTPSWLSSV*ASHGLA Trigger: AGCAAGACCATGACTGGCCAAAACACTGGAGAGCCA...ACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| 3UTR GCA 72 bp | AGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTaGTACCTGGTAAATAAACAGTACAGCCTCACACTA | + |
|
Preference number: 3 (lower is better) Translates to: SDTRASKSKQGS*YLVNKQYSLTL Trigger: TAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| 3UTR TCA 72 bp | GGACAGAAGTTCCACATAGCTCAGGGCGCTCTGCAGTaGTGTCAGACAATACCCTTCTTCTCCAATCAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: GQKFHIAQGALQ*CQTIPFFSNQV Trigger: TACTTGATTGGAGAAGAAGGGTATTGTCTGACATCACTGCAGAGCGCCCTGAGCTATGTGGAACTTCTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTGGGATTCACCCTCAGGCCTGGCCTCTTGGGCACGGCAGTAGTCTTCTGCGGGCCAGGAGGCCGTTaGCTTCTGGGGGCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGFTLRPGLLGTAVVFCGPGGR*LLGAGS Trigger: GCTCCCTGCCCCCAGAAGCCAACGGCCTCCTGGCCC...GCAGAAGACTACTGCCGTGCCCAAGAGGCCAGGCCTGAGGGTGAATCCCAGCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTCAGGGCCGCACACTCTaGCACCAGCTGGGGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TQAWAVTPGPAKANRAVAQGRTL*HQLGEA Trigger: GGCCTCCCCCAGCTGGTGTCAGAGTGTGCGGCCCTG...AGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGCCTGGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCCACCATGGCGCTCTGCAGTaGCTTCGCCCCGCCGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MQCSVEVPWLLWSVRSSHHGALQ*LRPAVP Trigger: GGGGACGGCGGGGCGAAGCCACTGCAGAGCGCCATG...GTGGCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCAT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCCACGGGCCAGGAGGCCGTTaGCTTCTGGGGGCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: MQCSVEVPWLLWSVRSSHGPGGR*LLGAGS Trigger: GCTCCCTGCCCCCAGAAGCCAACGGCCTCCTGGCCC...GTGGCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | GACAGGATGGGCAGCAAGTCATCAGCACCGCTGATGGCAGCGGCAGGGGGCTGGGGCCTGAGTGGAGTGTaGGGACAGAGGGCGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DRMGSKSSAPLMAAAGGWGLSGV*GQRAWE Trigger: CTCCCACGCCCTCTGTCCCCACACTCCACTCAGGCC...CCAGCCCCCTGCCGCTGCCATCAGCGGTGCTGATGACTTGCTGCCCATCCTGTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
||
| CDS-3UTR TCA 90 bp | GGGCCGCACACTCTGACACCAGCTGGGGGAGGCCGCTTCTCAGCACCACGAAGGGGTGATCAGGAAGGCTaGGCAAGTGGGAGAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GPHTLTPAGGGRFSAPRRGDQEG*ASGRAG Trigger: GCCTGCTCTCCCACTTGCTCAGCCTTCCTGATCACC...CCTTCGTGGTGCTGAGAAGCGGCCTCCCCCAGCTGGTGTCAGAGTGTGCGGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
||
| CDS-3UTR GCA 90 bp | GGGCTGGGATTCACCCTCAGGCCTGGCCTCTTGGGCACGGCAGTAGTCTTCTGCCTTCCCGGGGCCGGTTaGCGGTGTCTAGCTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGFTLRPGLLGTAVVFCLPGAG*RCLARW Trigger: CCATCGAGCTAGACACCGGCAACCGGCCCCGGGAAG...GCAGAAGACTACTGCCGTGCCCAAGAGGCCAGGCCTGAGGGTGAATCCCAGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | CCCACACCAGATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGCATGGCGCTCTGCAGTaGCTTCGCCCCGCCGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: PTPDMQCSVEVPWLLWSVHGALQ*LRPAVP Trigger: GGGGACGGCGGGGCGAAGCCACTGCAGAGCGCCATG...CACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATCTGGTGTGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | ACTCTTCCAGGGCCGCACACTCTGACACCAGCTGGGGGAGGCCGCTTCTCAGCAGTCTTCTGCATGGCCTaGCTGGGGTCCAGACGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TLPGPHTLTPAGGGRFSAVFCMA*LGSRRA Trigger: GGCCCGTCTGGACCCCAGCCAGGCCATGCAGAAGAC...TGCTGAGAAGCGGCCTCCCCCAGCTGGTGTCAGAGTGTGCGGCCCTGGAAGAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | ACCTTGGTAGGAGAAAGGCTCATAACCCAGGCCTGGGCAGTGACACCCGGGCCACAGGGAGCAGCTGCCTaGGGCAGGCGCGGCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLVGERLITQAWAVTPGPQGAAA*GRRGTG Trigger: ACCAGTGCCGCGCCTGCCCCAGGCAGCTGCTCCCTG...TGGCCCGGGTGTCACTGCCCAGGCCTGGGTTATGAGCCTTTCTCCTACCAAGGT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | CTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGGGGCCAGGAGGCCGTTaGCTTCTGGGGGCAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LDFSYGVWGRPDSASHALGPGGR*LLGAGS Trigger: GCTCCCTGCCCCCAGAAGCCAACGGCCTCCTGGCCC...CAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR TCA 90 bp | AGCACCGCTGATGGCAGCGGCAGGGGGCTGGGATTCACCCTCAGGCCTGGCCTCAGCTGGGAGATTGGGTaGTCAGGAAGGCTGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: STADGSGRGLGFTLRPGLSWEIG*SGRLSK Trigger: CTTGCTCAGCCTTCCTGATCACCCAATCTCCCAGCT...GAGGCCAGGCCTGAGGGTGAATCCCAGCCCCCTGCCGCTGCCATCAGCGGTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
||
| CDS-3UTR GCA 90 bp | GTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTCTGGGGAGGGCCCTGCTGGGCTaGCGTCTGCCTCTCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VLQAPQGTAARFLLWGLGRALLG*RLPLCP Trigger: TGGACAGAGAGGCAGACGGCAGCCCAGCAGGGCCCT...CCCCAGACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR GCA 90 bp | CAGCTGGGGGAGGCCGCTTCTCAGCACCACGAAGGACAGGATGGGCAGCAAGTCACAGCTCCATGCTCCTaGTTACAGCGGCCTCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QLGEAASQHHEGQDGQQVTAPCS*LQRPPG Trigger: CCCGGGAGGCCGCTGTAAGCAGGAGCATGGAGCTGT...GACTTGCTGCCCATCCTGTCCTTCGTGGTGCTGAGAAGCGGCCTCCCCCAGCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
||
| CDS-3UTR CCA 90 bp | AGGGGGTGCGTTCCTGTACAGCTCCATGCTCCTGCTTACAGCGGCCTCCCGGGTTGGTTGGCAAGGGTGTaGGAGGAGCCGCAGGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: RGCVPVQLHAPAYSGLPGWLARV*EEPQVR Trigger: CCGTACCTGCGGCTCCTCCCACACCCTTGCCAACCA...ACCCGGGAGGCCGCTGTAAGCAGGAGCATGGAGCTGTACAGGAACGCACCCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTACCTGGTCTTCTGCATGGCCTaGCTGGGGTCCAGACGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GLGSDTRASKSKQGSCYLVFCMA*LGSRRA Trigger: GGCCCGTCTGGACCCCAGCCAGGCCATGCAGAAGAC...CAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTCTGGGGGTCTTCTGCATGGCCTaGCTGGGGTCCAGACGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VLQAPQGTAARFLLWGLGVFCMA*LGSRRA Trigger: GGCCCGTCTGGACCCCAGCCAGGCCATGCAGAAGAC...CCCCAGACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | GATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCGAGGCCGTTGGCTTCTaGGGGCAGGGAGCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: DMQCSVEVPWLLWSVRSSEAVGF*GQGAAA Trigger: GGCAGCTGCTCCCTGCCCCCAGAAGCCAACGGCCTC...GCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTCTGGGGCTCGTGGGGCTGCACTaGGCTCGGAGGGGGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLQAPQGTAARFLLWGLGLVGLH*ARRGKA Trigger: TGCTTTCCCCCTCCGAGCCCAGTGCAGCCCCACGAG...CCCCAGACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR TCA 90 bp | ACCTTGGTAGGAGAAAGGCTCATAACCCAGGCCTGGGCAGTGACACCCGGGCCAAGTCATCAGCACCGCTaGTGGCAGCGGCAGGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TLVGERLITQAWAVTPGPSHQHR*WQRQGA Trigger: AGCCCCCTGCCGCTGCCATCAGCGGTGCTGATGACT...TGGCCCGGGTGTCACTGCCCAGGCCTGGGTTATGAGCCTTTCTCCTACCAAGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118279.2 |
||
| CDS-3UTR GCA 90 bp | ACCTTGGTAGGAGAAAGGCTCATAACCCAGGCCTGGGCAGTGACACCCGGGCCACTTCCCGGGGCCGGTTaGCGGTGTCTAGCTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: TLVGERLITQAWAVTPGPLPGAG*RCLARW Trigger: CCATCGAGCTAGACACCGGCAACCGGCCCCGGGAAG...TGGCCCGGGTGTCACTGCCCAGGCCTGGGTTATGAGCCTTTCTCCTACCAAGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR GCA 90 bp | CTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGCTTCCCGGGGCCGGTTaGCGGTGTCTAGCTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LDFSYGVWGRPDSASHALLPGAG*RCLARW Trigger: CCATCGAGCTAGACACCGGCAACCGGCCCCGGGAAG...CAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTAGGGCCCTGCTGGGCTaGCGTCTGCCTCTCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VWGRPDSASHALLKRHCPRALLG*RLPLCP Trigger: TGGACAGAGAGGCAGACGGCAGCCCAGCAGGGCCCT...AGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTACCTGACAGCTCCATGCTCCTaGTTACAGCGGCCTCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GLGSDTRASKSKQGSCYLTAPCS*LQRPPG Trigger: CCCGGGAGGCCGCTGTAAGCAGGAGCATGGAGCTGT...CAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCCACTGGTTGGCAAGGGTGTaGGAGGAGCCGCAGGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: MQCSVEVPWLLWSVRSSHWLARV*EEPQVR Trigger: CCGTACCTGCGGCTCCTCCCACACCCTTGCCAACCA...GTGGCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTACCTGGTGGTTGGCAAGGGTGTaGGAGGAGCCGCAGGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: AWAVTPGPAKANRAVATWWLARV*EEPQVR Trigger: CCGTACCTGCGGCTCCTCCCACACCCTTGCCAACCA...CCAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTACCTGGCGGTGTCTGCTGGTTaGCAAGGGTGTGGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGSDTRASKSKQGSCYLAVSAG*QGCGRS Trigger: GCTCCTCCCACACCCTTGCCAACCAGCAGACACCGC...CAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTGGGCACGGCAGTAGTCTTCTGCACAGATGCAGATGACCCGCAGCGTCCGTCTGCATGGCCTGGCTaGGGTCCAGACGGGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: LLGTAVVFCTDADDPQRPSAWPG*GPDGPS Trigger: GGATGGCCCGTCTGGACCCCAGCCAGGCCATGCAGA...CGGACGCTGCGGGTCATCTGCATCTGTGCAGAAGACTACTGCCGTGCCCAAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | AGCACCGCTGATGGCAGCGGCAGGGGGCTGGGATTCACCCTCAGGCCTGGCCTCGGCTCTCCAGTGTTTTaGCCAGTCATGGTCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: STADGSGRGLGFTLRPGLGSPVF*PVMVLL Trigger: GAGCAAGACCATGACTGGCCAAAACACTGGAGAGCC...GAGGCCAGGCCTGAGGGTGAATCCCAGCCCCCTGCCGCTGCCATCAGCGGTGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
||
| CDS-3UTR CCA 90 bp | GATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCCTCGTGGGGCTGCACTaGGCTCGGAGGGGGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: DMQCSVEVPWLLWSVRSSLVGLH*ARRGKA Trigger: TGCTTTCCCCCTCCGAGCCCAGTGCAGCCCCACGAG...GCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | ACCTTGGTAGGAGAAAGGCTCATAACCCAGGCCTGGGCAGTGACACCCGGGCCACTCGTGGGGCTGCACTaGGCTCGGAGGGGGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLVGERLITQAWAVTPGPLVGLH*ARRGKA Trigger: TGCTTTCCCCCTCCGAGCCCAGTGCAGCCCCACGAG...TGGCCCGGGTGTCACTGCCCAGGCCTGGGTTATGAGCCTTTCTCCTACCAAGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCCACCAGCAGGGGCCACAGTaGGGAGAAGAAGGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: MQCSVEVPWLLWSVRSSHQQGPQ*GEEGLL Trigger: GAGGAGCCCTTCTTCTCCCCACTGTGGCCCCTGCTG...GTGGCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTACCTGCAGCAGGGGCCACAGTaGGGAGAAGAAGGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GLGSDTRASKSKQGSCYLQQGPQ*GEEGLL Trigger: GAGGAGCCCTTCTTCTCCCCACTGTGGCCCCTGCTG...CAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR TCA 90 bp | AACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCCAGGGCCGCACACTCTaGCACCAGCTGGGGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSTASHYLHPVLWGQGKAQGRTL*HQLGEA Trigger: GGCCTCCCCCAGCTGGTGTCAGAGTGTGCGGCCCTG...GGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR GCA 90 bp | ATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCCACAGAAGGGCTCCTCGATaGAGGCCAGGCAGCGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MQCSVEVPWLLWSVRSSHRRAPR*RPGSGL Trigger: AAGACCGCTGCCTGGCCTGCATCGAGGAGCCCTTCT...GTGGCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTCCCCAGCTCCTGGGCTaGAGTGCAGTAGGGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VWGRPDSASHALLKRHCPPQLLG*SAVGVG Trigger: ACCTACCCCTACTGCACTGCAGCCCAGGAGCTGGGG...AGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR GCA 90 bp | CTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGCCCCAGCTCCTGGGCTaGAGTGCAGTAGGGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LDFSYGVWGRPDSASHALPQLLG*SAVGVG Trigger: ACCTACCCCTACTGCACTGCAGCCCAGGAGCTGGGG...CAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | CGGCAGCTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATTGGTTGGCAAGGGTGTaGGAGGAGCCGCAGGTACGG | + |
|
Preference number: 4 (lower is better) Translates to: RQLDFSYGVWGRPDSASHWLARV*EEPQVR Trigger: CCGTACCTGCGGCTCCTCCCACACCCTTGCCAACCA...ATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAGCTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | CTCTTGGGCACGGCAGTAGTCTTCTGCACAGATGCAGATGACCCGCAGCGTCCGGCGGTGTCTGCTGGTTaGCAAGGGTGTGGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLGTAVVFCTDADDPQRPAVSAG*QGCGRS Trigger: GCTCCTCCCACACCCTTGCCAACCAGCAGACACCGC...CGGACGCTGCGGGTCATCTGCATCTGTGCAGAAGACTACTGCCGTGCCCAAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTCTCGGCGGTGTCTGCTaGTTGGCAAGGGTGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VWGRPDSASHALLKRHCPLGGVC*LARVWE Trigger: CTCCCACACCCTTGCCAACCAGCAGACACCGCCGAG...AGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | CTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGCTCGGCGGTGTCTGCTaGTTGGCAAGGGTGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LDFSYGVWGRPDSASHALLGGVC*LARVWE Trigger: CTCCCACACCCTTGCCAACCAGCAGACACCGCCGAG...CAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCCACTTGGAGGCCGTTGGCTTCTaGGGGCAGGGAGCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: TASHYLHPVLWGQGKAHLEAVGF*GQGAAA Trigger: GGCAGCTGCTCCCTGCCCCCAGAAGCCAACGGCCTC...CAAGTGGGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | CGGCAGCTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATTCCATCCAGCACTCGTaGGGCTGCACTGGGCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: RQLDFSYGVWGRPDSASHSIQHS*GCTGLG Trigger: TCCGAGCCCAGTGCAGCCCCACGAGTGCTGGATGGA...ATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAGCTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | CCCACACCAGATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGTCCATCCAGCACTCGTaGGGCTGCACTGGGCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PTPDMQCSVEVPWLLWSVSIQHS*GCTGLG Trigger: TCCGAGCCCAGTGCAGCCCCACGAGTGCTGGATGGA...CACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATCTGGTGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGGGCCTGAGTGGAGTGTaGGGACAGAGGGCGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSYGVWGRPDSASHALLKGLSGV*GQRAWE Trigger: CTCCCACGCCCTCTGTCCCCACACTCCACTCAGGCC...CTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | GGGCCGCACACTCTGACACCAGCTGGGGGAGGCCGCTTCTCAGCACCACGAAGGTTCCCTCTTTGCTCCTaGGGTCTGAGGCTCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: GPHTLTPAGGGRFSAPRRFPLCS*GLRLRH Trigger: ATGTCTGAGCCTCAGACCCCAGGAGCAAAGAGGGAA...CCTTCGTGGTGCTGAGAAGCGGCCTCCCCCAGCTGGTGTCAGAGTGTGCGGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
||
| CDS-3UTR CCA 90 bp | GGCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTACCTGCCAGGCAGCGGTCTTTaGAGGTGGCTGTGTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GLGSDTRASKSKQGSCYLPGSGL*RWLCSG Trigger: GCCTGAACACAGCCACCTCCAAAGACCGCTGCCTGG...CAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTCTCGTGGGAGGAGCTTaGTGGGGATGCCTAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VWGRPDSASHALLKRHCPLVGGA*WGCLGL Trigger: CAGCCCTAGGCATCCCCACCAAGCTCCTCCCACGAG...AGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | GATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCCTCGTGGGAGGAGCTTaGTGGGGATGCCTAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: DMQCSVEVPWLLWSVRSSLVGGA*WGCLGL Trigger: CAGCCCTAGGCATCCCCACCAAGCTCCTCCCACGAG...GCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | GAAGGACAGGATGGGCAGCAAGTCATCAGCACCGCTGATGGCAGCGGCAGGGGGAGCCTCAGGAACTCGTaGGAGGAGCTTGGTGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: EGQDGQQVISTADGSGRGSLRNS*EELGGD Trigger: ATCCCCACCAAGCTCCTCCCACGAGTTCCTGAGGCT...CCCCCTGCCGCTGCCATCAGCGGTGCTGATGACTTGCTGCCCATCCTGTCCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
||
| CDS-3UTR CCA 90 bp | CGGCAGCTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATCACTCTGACACCAGCTaGGGGAGGCCGCTTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQLDFSYGVWGRPDSASHHSDTS*GRPLLS Trigger: GCTGAGAAGCGGCCTCCCCCAGCTGGTGTCAGAGTG...ATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAGCTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| 3UTR CAA 72 bp | GGCAGGGGGCTGGGATTCACCCTCAGGCCTGGCCTCTaGGGCACGGCAGTAGTCTTCTGCACAGATGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: GRGLGFTLRPGL*GTAVVFCTDAD Trigger: ATCTGCATCTGTGCAGAAGACTACTGCCGTGCCCAAGAGGCCAGGCCTGAGGGTGAATCCCAGCCCCCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
||
| CDS-3UTR TCA 90 bp | CTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGGGTGATCAGGAAGGCTaGGCAAGTGGGAGAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LDFSYGVWGRPDSASHALGDQEG*ASGRAG Trigger: GCCTGCTCTCCCACTTGCTCAGCCTTCCTGATCACC...CAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR TCA 90 bp | GTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTCTGGGGCACTCGAGCTTCTTCTaGGGGCAGCTCTCCAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: VLQAPQGTAARFLLWGLGHSSFF*GQLSKT Trigger: GGTCTTGGAGAGCTGCCCTCAGAAGAAGCTCGAGTG...CCCCAGACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR TCA 90 bp | ACCCAGGCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTCACTCGAGCTTCTTCTaGGGGCAGCTCTCCAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: TQAWAVTPGPAKANRAVAHSSFF*GQLSKT Trigger: GGTCTTGGAGAGCTGCCCTCAGAAGAAGCTCGAGTG...AGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGCCTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR GCA 90 bp | CAATCAGTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTCTTCCCGGGGCCGGTTaGCGGTGTCTAGCTCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: QSVLQAPQGTAARFLLWGLPGAG*RCLARW Trigger: CCATCGAGCTAGACACCGGCAACCGGCCCCGGGAAG...ACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCACTGATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCACCGATGGCAGCGGCAGGGGGCTGGGATTCACCCTCAGGCCTGGCCTCTAGATTCTCCATCATCTaGCGCTGTAGAGACAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SAPMAAAGGWDSPSGLASRFSII*RCRDRV Trigger: GACCCTGTCTCTACAGCGGCAGATGATGGAGAATCT...AGAGGCCAGGCCTGAGGGTGAATCCCAGCCCCCTGCCGCTGCCATCGGTGCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| CDS-3UTR GCA 90 bp | CAATCAGTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTAGGGCCCTGCTGGGCTaGCGTCTGCCTCTCTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSVLQAPQGTAARFLLWGRALLG*RLPLCP Trigger: TGGACAGAGAGGCAGACGGCAGCCCAGCAGGGCCCT...ACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCACTGATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTACCTGGCAAGGGTTCCCTCTTTaGTCCTGGGGTCTGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AWAVTPGPAKANRAVATWQGFPL*SWGLRL Trigger: GAGCCTCAGACCCCAGGAGCAAAGAGGGAACCCTTG...CCAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR GCA 90 bp | ACCTTGGTAGGAGAAAGGCTCATAACCCAGGCCTGGGCAGTGACACCCGGGCCAAGAAGGGCTCCTCGATaGAGGCCAGGCAGCGGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLVGERLITQAWAVTPGPRRAPR*RPGSGL Trigger: AAGACCGCTGCCTGGCCTGCATCGAGGAGCCCTTCT...TGGCCCGGGTGTCACTGCCCAGGCCTGGGTTATGAGCCTTTCTCCTACCAAGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGGCGGTGTCTGCTGGTTaGCAAGGGTGTGGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSYGVWGRPDSASHALLKAVSAG*QGCGRS Trigger: GCTCCTCCCACACCCTTGCCAACCAGCAGACACCGC...CTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | CAGCTGGGGGAGGCCGCTTCTCAGCACCACGAAGGACAGGATGGGCAGCAAGTCGTGGCCCTCAGCTTCTaGTTTTGTAGGGAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QLGEAASQHHEGQDGQQVVALSF*FCREAF Trigger: GAAGGCCTCCCTACAAAACCAGAAGCTGAGGGCCAC...GACTTGCTGCCCATCCTGTCCTTCGTGGTGCTGAGAAGCGGCCTCCCCCAGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCCACTTGGTCTTCTGCATGGCCTaGCTGGGGTCCAGACGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TASHYLHPVLWGQGKAHLVFCMA*LGSRRA Trigger: GGCCCGTCTGGACCCCAGCCAGGCCATGCAGAAGAC...CAAGTGGGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCCACTGCAGAACCTCCTGTTaGCAGCCTCCTGAAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: MQCSVEVPWLLWSVRSSHCRTSC*QPPEGA Trigger: TGCGCCTTCAGGAGGCTGCCAACAGGAGGTTCTGCA...GTGGCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTAGGATTCACCCTCAGGCCTaGCCTCTTGGGCACGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: WGRPDSASHALLKRHCPRIHPQA*PLGHGS Trigger: ACTGCCGTGCCCAAGAGGCCAGGCCTGAGGGTGAAT...CCTAGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR GCA 90 bp | GGGCCGCACACTCTGACACCAGCTGGGGGAGGCCGCTTCTCAGCACCACGAAGGTGTGATTCTGCCACCTaGAGCTTCTGGAAGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GPHTLTPAGGGRFSAPRRCDSAT*SFWKIS Trigger: TGAGATCTTCCAGAAGCTGCAGGTGGCAGAATCACA...CCTTCGTGGTGCTGAGAAGCGGCCTCCCCCAGCTGGTGTCAGAGTGTGCGGCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
||
| CDS-3UTR GCA 90 bp | CGGCAGCTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATCAAGGGTTCCCTCTTTaGTCCTGGGGTCTGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQLDFSYGVWGRPDSASHQGFPL*SWGLRL Trigger: GAGCCTCAGACCCCAGGAGCAAAGAGGGAACCCTTG...ATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAGCTGCCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR GCA 90 bp | CCCACACCAGATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGCAAGGGTTCCCTCTTTaGTCCTGGGGTCTGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PTPDMQCSVEVPWLLWSVQGFPL*SWGLRL Trigger: GAGCCTCAGACCCCAGGAGCAAAGAGGGAACCCTTG...CACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATCTGGTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTCTGGGGGTGGCCCTCAGCTTCTaGTTTTGTAGGGAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VLQAPQGTAARFLLWGLGVALSF*FCREAF Trigger: GAAGGCCTCCCTACAAAACCAGAAGCTGAGGGCCAC...CCCCAGACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | AGGGGGTGCGTTCCTGTACAGCTCCATGCTCCTGCTTACAGCGGCCTCCCGGGTTCCGGGCCTCATATGTaGCCCTCAGCTTCTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RGCVPVQLHAPAYSGLPGSGPHM*PSASGF Trigger: AAAACCAGAAGCTGAGGGCCACATATGAGGCCCGGA...ACCCGGGAGGCCGCTGTAAGCAGGAGCATGGAGCTGTACAGGAACGCACCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | GATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCTGCAGAACCTCCTGTTaGCAGCCTCCTGAAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: DMQCSVEVPWLLWSVRSSCRTSC*QPPEGA Trigger: TGCGCCTTCAGGAGGCTGCCAACAGGAGGTTCTGCA...GCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | GCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTACCTGGCAGGAGCTGGGAGATTaGGTGATCAGGAAGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: AWAVTPGPAKANRAVATWQELGD*VIRKAE Trigger: CTCAGCCTTCCTGATCACCCAATCTCCCAGCTCCTG...CCAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS-3UTR CCA 90 bp | GTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGCAGGGAGCAGCTGCCTaGGGCAGGCGCGGCACTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VNKQYSLTLPTPSSLGAGQGAAA*GRRGTG Trigger: ACCAGTGCCGCGCCTGCCCCAGGCAGCTGCTCCCTG...CCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS-3UTR CCA 90 bp | TGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTAGGAGCCTCAGGAACTCGTaGGAGGAGCTTGGTGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: WGRPDSASHALLKRHCPRSLRNS*EELGGD Trigger: ATCCCCACCAAGCTCCTCCCACGAGTTCCTGAGGCT...CCTAGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | GTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTCTGGGGTGCAGTAGGGGTAGGTaGAGGCTTGAGCCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VLQAPQGTAARFLLWGLGCSRGR*RLEPQE Trigger: TTCCTGAGGCTCAAGCCTCCACCTACCCCTACTGCA...CCCCAGACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS-3UTR CCA 90 bp | TTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGATTCACCCTCAGGCCTaGCCTCTTGGGCACGGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FSYGVWGRPDSASHALLKIHPQA*PLGHGS Trigger: ACTGCCGTGCCCAAGAGGCCAGGCCTGAGGGTGAAT...CTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | ACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCCACTTGCACTCTGACACCAGCTaGGGGAGGCCGCTTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TASHYLHPVLWGQGKAHLHSDTS*GRPLLS Trigger: GCTGAGAAGCGGCCTCCCCCAGCTGGTGTCAGAGTG...CAAGTGGGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR TCA 90 bp | CACACTCTGACACCAGCTGGGGGAGGCCGCTTCTCAGCACCACGAAGGACAGGATTTGCTCCTGGGGTCTaGGGCTCAGACATAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HTLTPAGGGRFSAPRRTGFAPGV*GSDIAK Trigger: TTTGGCTATGTCTGAGCCTCAGACCCCAGGAGCAAA...TCCTGTCCTTCGTGGTGCTGAGAAGCGGCCTCCCCCAGCTGGTGTCAGAGTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
||
| CDS-3UTR GCA 90 bp | GTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTCTGGGGACGGCAGTAGTCTTCTaGACAGATGCAGATGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: VLQAPQGTAARFLLWGLGTAVVF*TDADDP Trigger: CGGGTCATCTGCATCTGTGCAGAAGACTACTGCCGT...CCCCAGACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS-3UTR CCA 90 bp | ATGTCCTTGACTGTGCTCTTCAGACACTCCAACAAGGGTTCCCTCTTTGCTCCTCATGGCGCTCTGCAGTaGCTTCGCCCCGCCGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: MSLTVLFRHSNKGSLFAPHGALQ*LRPAVP Trigger: GGGGACGGCGGGGCGAAGCCACTGCAGAGCGCCATG...AGGAGCAAAGAGGGAACCCTTGTTGGAGTGTCTGAAGAGCACAGTCAAGGACAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
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| CDS-3UTR CCA 90 bp | GTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTGCTCGATGGCCTTGTTaGCCAGTTTCATGGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VWGRPDSASHALLKRHCPARWPC*PVSWRS Trigger: AGAGCGCCATGAAACTGGCCAACAAGGCCATCGAGC...AGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CCA 90 bp | CGGCAGCTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATGCTCGATGGCCTTGTTaGCCAGTTTCATGGCGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RQLDFSYGVWGRPDSASHARWPC*PVSWRS Trigger: AGAGCGCCATGAAACTGGCCAACAAGGCCATCGAGC...ATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAGCTGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CCA 90 bp | CGGCAGCTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATTTGGTAGCTGTTGACTaGGCCCGCTCCAGACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: RQLDFSYGVWGRPDSASHLVAVD*ARSRHC Trigger: ACAGTGTCTGGAGCGGGCCCAGTCAACAGCTACCAA...ATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAGCTGCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CCA 90 bp | TGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTAGGTTGGTAGCTGTTGACTaGGCCCGCTCCAGACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: WGRPDSASHALLKRHCPRLVAVD*ARSRHC Trigger: ACAGTGTCTGGAGCGGGCCCAGTCAACAGCTACCAA...CCTAGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCCACGGAGGCCTTCTCCAGTaGTGTCAGCTCCTTCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: MQCSVEVPWLLWSVRSSHGGLLQ*CQLLLR Trigger: TCTAAGAAGGAGCTGACACCACTGGAGAAGGCCTCC...GTGGCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CCA 90 bp | ACCCAGGCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTGGAGGCCTTCTCCAGTaGTGTCAGCTCCTTCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TQAWAVTPGPAKANRAVAGGLLQ*CQLLLR Trigger: TCTAAGAAGGAGCTGACACCACTGGAGAAGGCCTCC...AGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGCCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CCA 90 bp | GCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTACCTGGGGAGGCCTTCTCCAGTaGTGTCAGCTCCTTCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: AWAVTPGPAKANRAVATWGGLLQ*CQLLLR Trigger: TCTAAGAAGGAGCTGACACCACTGGAGAAGGCCTCC...CCAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CCA 90 bp | ACCCAGGCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTTCCGGGCCTCATATGTaGCCCTCAGCTTCTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TQAWAVTPGPAKANRAVASGPHM*PSASGF Trigger: AAAACCAGAAGCTGAGGGCCACATATGAGGCCCGGA...AGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGCCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CCA 90 bp | GGATTCACCCTCAGGCCTGGCCTCTTGGGCACGGCAGTAGTCTTCTGCACAGATCTGCTCCCGCTCCTCTaGGGTCAGAGCAACTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: GFTLRPGLLGTAVVFCTDLLPLL*GQSNLT Trigger: AGTCAAGTTGCTCTGACCCCAGAGGAGCGGGAGCAG...ATCTGTGCAGAAGACTACTGCCGTGCCCAAGAGGCCAGGCCTGAGGGTGAATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
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| CDS-3UTR CCA 90 bp | GATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCCAGGAGCTGGGAGATTaGGTGATCAGGAAGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DMQCSVEVPWLLWSVRSSQELGD*VIRKAE Trigger: CTCAGCCTTCCTGATCACCCAATCTCCCAGCTCCTG...GCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS-3UTR CCA 90 bp | TGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTAGGCAGGAGCTGGGAGATTaGGTGATCAGGAAGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: WGRPDSASHALLKRHCPRQELGD*VIRKAE Trigger: CTCAGCCTTCCTGATCACCCAATCTCCCAGCTCCTG...CCTAGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS-3UTR CCA 90 bp | GATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCTGCAGTAGGGGTAGGTaGAGGCTTGAGCCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DMQCSVEVPWLLWSVRSSCSRGR*RLEPQE Trigger: TTCCTGAGGCTCAAGCCTCCACCTACCCCTACTGCA...GCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS-3UTR CCA 90 bp | CCCACACCAGATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGTGCAGTAGGGGTAGGTaGAGGCTTGAGCCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PTPDMQCSVEVPWLLWSVCSRGR*RLEPQE Trigger: TTCCTGAGGCTCAAGCCTCCACCTACCCCTACTGCA...CACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATCTGGTGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS-3UTR CCA 90 bp | CCCACACCAGATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGCCACGAAGGACAGGATaGGCAGCAAGTCATCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: PTPDMQCSVEVPWLLWSVPRRTG*AASHQH Trigger: GTGCTGATGACTTGCTGCCCATCCTGTCCTTCGTGG...CACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATCTGGTGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS-3UTR TCA 90 bp | GGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTCTGTTGGCAGCCTCCTaGAGGCGCAGGCGGCGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GSCYLVNKQYSLTLPTPSLLAAS*RRRRRS Trigger: GGAGCGCCGCCTGCGCCTTCAGGAGGCTGCCAACAG...ACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR TCA 90 bp | CTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGATCAAGTACCCCTCATaGGTGAACTCTTCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LDFSYGVWGRPDSASHALIKYPS*VNSSRA Trigger: GGCCCTGGAAGAGTTCACTCATGAGGGGTACTTGAT...CAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS-3UTR GCA 90 bp | ACTCTTCCAGGGCCGCACACTCTGACACCAGCTGGGGGAGGCCGCTTCTCAGCATGTGATTCTGCCACCTaGAGCTTCTGGAAGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TLPGPHTLTPAGGGRFSACDSAT*SFWKIS Trigger: TGAGATCTTCCAGAAGCTGCAGGTGGCAGAATCACA...TGCTGAGAAGCGGCCTCCCCCAGCTGGTGTCAGAGTGTGCGGCCCTGGAAGAGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
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| CDS-3UTR GCA 90 bp | GCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTACCTGGAGATTCTCCATCATCTaGCGCTGTAGAGACAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AWAVTPGPAKANRAVATWRFSII*RCRDRV Trigger: GACCCTGTCTCTACAGCGGCAGATGATGGAGAATCT...CCAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR GCA 90 bp | GTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTCTGGGGGGCCAGTCATGGTCTTaGTCATACTCCAAGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLQAPQGTAARFLLWGLGGQSWS*SYSKMA Trigger: TGCCATCTTGGAGTATGAGCAAGACCATGACTGGCC...CCCCAGACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCAC 58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS-3UTR CCA 90 bp | AACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCGCCACCTGCAGCTTCTaGAAGATCTCAGGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSTASHYLHPVLWGQGKAATCSF*KISGGR Trigger: CCTGCCCCCTGAGATCTTCCAGAAGCTGCAGGTGGC...GGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CCA 90 bp | CCCACACCAGATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGTCCGGGCCTCATATGTaGCCCTCAGCTTCTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PTPDMQCSVEVPWLLWSVSGPHM*PSASGF Trigger: AAAACCAGAAGCTGAGGGCCACATATGAGGCCCGGA...CACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATCTGGTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CCA 90 bp | GTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTCTGCATGGCCTGGCTaGGGTCCAGACGGGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VNKQYSLTLPTPSSLGAGSAWPG*GPDGPS Trigger: GGATGGCCCGTCTGGACCCCAGCCAGGCCATGCAGA...CCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CCA 90 bp | GAAGTTCCACATAGCTCAGGGCGCTCTGCAGTGATGTCAGACAATACCCTTCTTGAGGCCGTTGGCTTCTaGGGGCAGGGAGCAGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: EVPHSSGRSAVMSDNTLLEAVGF*GQGAAA Trigger: GGCAGCTGCTCCCTGCCCCCAGAAGCCAACGGCCTC...AAGAAGGGTATTGTCTGACATCACTGCAGAGCGCCCTGAGCTATGTGGAACTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
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| CDS-3UTR CCA 90 bp | TGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTAGGTTCCCTCTTTGCTCCTaGGGTCTGAGGCTCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: WGRPDSASHALLKRHCPRFPLCS*GLRLRH Trigger: ATGTCTGAGCCTCAGACCCCAGGAGCAAAGAGGGAA...CCTAGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| 3UTR CAA 72 bp | AGATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTaGGTCTGTGAGGTCCAGCCACCACTACTTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RYAVQRGGPVAP*VCEVQPPLLVQ Trigger: CTGGACAAGTAGTGGTGGCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
||
| 3UTR CAA 72 bp | AAGAAGGGCTCCTCGATGCAGGCCAGGCAGCGGTCTTaGGAGGTGGCTGTGTTCAGGCTTTCGAAGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KKGSSMQARQRS*EVAVFRLSKAK Trigger: TTTGGCCTTCGAAAGCCTGAACACAGCCACCTCCAAAGACCGCTGCCTGGCCTGCATCGAGGAGCCCTTCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| CDS-3UTR GCA 90 bp | CCCACACCAGATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGATGTAGTGGATGCTaGGCAGGTATTCCACGTACG | + |
|
Preference number: 4 (lower is better) Translates to: PTPDMQCSVEVPWLLWSVRCSGC*AGIPRT Trigger: CGTACGTGGAATACCTGCGCAGCATCCACTACATCT...CACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATCTGGTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR GCA 90 bp | TGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTAGGAGATTCTCCATCATCTaGCGCTGTAGAGACAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WGRPDSASHALLKRHCPRRFSII*RCRDRV Trigger: GACCCTGTCTCTACAGCGGCAGATGATGGAGAATCT...CCTAGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | CCTGAACATATTTCACTGTCCCCAACCAAGATAAGCCCAGGGCAGGATGTCCTGGCGGTGTCTGCTGGTTaGCAAGGGTGTGGGAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PEHISLSPTKISPGQDVLAVSAG*QGCGRS Trigger: GCTCCTCCCACACCCTTGCCAACCAGCAGACACCGC...CAGGACATCCTGCCCTGGGCTTATCTTGGTTGGGGACAGTGAAATATGTTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | CAATCAGTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTGTGGCCCTCAGCTTCTaGTTTTGTAGGGAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QSVLQAPQGTAARFLLWGVALSF*FCREAF Trigger: GAAGGCCTCCCTACAAAACCAGAAGCTGAGGGCCAC...ACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCACTGATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCTCTGCATGGCCTGGCTaGGGTCCAGACGGGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: QGSCYLVNKQYSLTLPTPSAWPG*GPDGPS Trigger: GGATGGCCCGTCTGGACCCCAGCCAGGCCATGCAGA...GGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | CCTGAACATATTTCACTGTCCCCAACCAAGATAAGCCCAGGGCAGGATGTCCTGTCCATCCAGCACTCGTaGGGCTGCACTGGGCTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PEHISLSPTKISPGQDVLSIQHS*GCTGLG Trigger: TCCGAGCCCAGTGCAGCCCCACGAGTGCTGGATGGA...CAGGACATCCTGCCCTGGGCTTATCTTGGTTGGGGACAGTGAAATATGTTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGTTCCCTCTTTGCTCCTaGGGTCTGAGGCTCAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: FSYGVWGRPDSASHALLKFPLCS*GLRLRH Trigger: ATGTCTGAGCCTCAGACCCCAGGAGCAAAGAGGGAA...CTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCTGAACATATTTCACTGTCCCCAACCAAGATAAGCCCAGGGCAGGATAGTCATCAGCACCGATaGCAGCGGCAGGGGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QCPEHISLSPTKISPGQDSHQHR*QRQGAG Trigger: CCCAGCCCCCTGCCGCTGCCATCGGTGCTGATGACT...ATCCTGCCCTGGGCTTATCTTGGTTGGGGACAGTGAAATATGTTCAGGACACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122363.8 |
||
| 3UTR CAA 72 bp | GTCACTAGCGACAGGTCTCCTGGACTCCGCTTGAGCTaGGCTCTCCAGTGTTTTGGCCAGTCATGGTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTSDRSPGLRLS*ALQCFGQSWSC Trigger: GCAAGACCATGACTGGCCAAAACACTGGAGAGCCAAGCTCAAGCGGAGTCCAGGAGACCTGTCGCTAGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| CDS-3UTR TCA 90 bp | AACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCAGCTGGGAGATTGGGTaGTCAGGAAGGCTGAGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSTASHYLHPVLWGQGKASWEIG*SGRLSK Trigger: CTTGCTCAGCCTTCCTGATCACCCAATCTCCCAGCT...GGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR GCA 90 bp | CCCACACCAGATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGTGTGATTCTGCCACCTaGAGCTTCTGGAAGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PTPDMQCSVEVPWLLWSVCDSAT*SFWKIS Trigger: TGAGATCTTCCAGAAGCTGCAGGTGGCAGAATCACA...CACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATCTGGTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR GCA 90 bp | CGGCAGCTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATTGTGATTCTGCCACCTaGAGCTTCTGGAAGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RQLDFSYGVWGRPDSASHCDSAT*SFWKIS Trigger: TGAGATCTTCCAGAAGCTGCAGGTGGCAGAATCACA...ATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAGCTGCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR GCA 90 bp | TTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGATTCTCCATCATCTaGCGCTGTAGAGACAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FSYGVWGRPDSASHALLKRFSII*RCRDRV Trigger: GACCCTGTCTCTACAGCGGCAGATGATGGAGAATCT...CTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR GCA 90 bp | GCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTACCTGGCAGTGTCTCTTCTCTTaGTTTGGCGATCACCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: AWAVTPGPAKANRAVATWQCLFS*FGDHQI Trigger: AATCTGGTGATCGCCAAAGCAAGAGAAGAGACACTG...CCAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR GCA 90 bp | GAAGTTCCACATAGCTCAGGGCGCTCTGCAGTGATGTCAGACAATACCCTTCTTCCCCAGCTCCTGGGCTaGAGTGCAGTAGGGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EVPHSSGRSAVMSDNTLLPQLLG*SAVGVG Trigger: ACCTACCCCTACTGCACTGCAGCCCAGGAGCTGGGG...AAGAAGGGTATTGTCTGACATCACTGCAGAGCGCCCTGAGCTATGTGGAACTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
||
| CDS-3UTR GCA 90 bp | ACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCCACTTGACGGCAGTAGTCTTCTaGACAGATGCAGATGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: TASHYLHPVLWGQGKAHLTAVVF*TDADDP Trigger: CGGGTCATCTGCATCTGTGCAGAAGACTACTGCCGT...CAAGTGGGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | AACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCTTGGTAGCTGTTGACTaGGCCCGCTCCAGACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: NSTASHYLHPVLWGQGKALVAVD*ARSRHC Trigger: ACAGTGTCTGGAGCGGGCCCAGTCAACAGCTACCAA...GGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCCTCGGCGGTGTCTGCTaGTTGGCAAGGGTGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QGSCYLVNKQYSLTLPTPLGGVC*LARVWE Trigger: CTCCCACACCCTTGCCAACCAGCAGACACCGCCGAG...GGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | GTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGGCCACCTGCAGCTTCTaGAAGATCTCAGGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VNKQYSLTLPTPSSLGAGATCSF*KISGGR Trigger: CCTGCCCCCTGAGATCTTCCAGAAGCTGCAGGTGGC...CCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | AACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCGTGGCCCTCAGCTTCTaGTTTTGTAGGGAGGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSTASHYLHPVLWGQGKAVALSF*FCREAF Trigger: GAAGGCCTCCCTACAAAACCAGAAGCTGAGGGCCAC...GGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTTCTGCATGGCCTGGCTaGGGTCCAGACGGGCCATCC | + |
|
Preference number: 4 (lower is better) Translates to: GSCYLVNKQYSLTLPTPSSAWPG*GPDGPS Trigger: GGATGGCCCGTCTGGACCCCAGCCAGGCCATGCAGA...ACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAGGCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTTCTCTTCTCTTGCTTTaGCGATCACCAGATTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TQAWAVTPGPAKANRAVASLLLL*RSPDSP Trigger: TGGAGAATCTGGTGATCGCCAAAGCAAGAGAAGAGA...AGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGCCTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | ATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCCACTGTTTTGGCCAGTCATaGTCTTGCTCATACTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: MQCSVEVPWLLWSVRSSHCFGQS*SCSYSK Trigger: CTTGGAGTATGAGCAAGACCATGACTGGCCAAAACA...GTGGCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | GTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGCCAGGCAGCGGTCTTTaGAGGTGGCTGTGTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VNKQYSLTLPTPSSLGAGPGSGL*RWLCSG Trigger: GCCTGAACACAGCCACCTCCAAAGACCGCTGCCTGG...CCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | CCTGAACATATTTCACTGTCCCCAACCAAGATAAGCCCAGGGCAGGATGTCCTGCCAGGCAGCGGTCTTTaGAGGTGGCTGTGTTCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PEHISLSPTKISPGQDVLPGSGL*RWLCSG Trigger: GCCTGAACACAGCCACCTCCAAAGACCGCTGCCTGG...CAGGACATCCTGCCCTGGGCTTATCTTGGTTGGGGACAGTGAAATATGTTCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCCAGCAGGGGCCACAGTaGGGAGAAGAAGGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QGSCYLVNKQYSLTLPTPQQGPQ*GEEGLL Trigger: GAGGAGCCCTTCTTCTCCCCACTGTGGCCCCTGCTG...GGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCCTCGTGGGAGGAGCTTaGTGGGGATGCCTAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: QGSCYLVNKQYSLTLPTPLVGGA*WGCLGL Trigger: CAGCCCTAGGCATCCCCACCAAGCTCCTCCCACGAG...GGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | AACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCCCACGAAGGACAGGATaGGCAGCAAGTCATCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: NSTASHYLHPVLWGQGKAPRRTG*AASHQH Trigger: GTGCTGATGACTTGCTGCCCATCCTGTCCTTCGTGG...GGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR TCA 90 bp | GTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTCTTCTTAGAGTTTTGTaGTTCTGCCACCTGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VWGRPDSASHALLKRHCPLLRVL*FCHLQL Trigger: AAGCTGCAGGTGGCAGAATCACAAAACTCTAAGAAG...AGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR TCA 90 bp | CTCTTGGGCACGGCAGTAGTCTTCTGCACAGATGCAGATGACCCGCAGCGTCCGCTATCAATGGCATTGTaGATGTCCTTGACTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLGTAVVFCTDADDPQRPLSMAL*MSLTVL Trigger: GAGCACAGTCAAGGACATTCACAATGCCATTGATAG...CGGACGCTGCGGGTCATCTGCATCTGTGCAGAAGACTACTGCCGTGCCCAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
||
| CDS-3UTR TCA 90 bp | CTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGCTATCAATGGCATTGTaGATGTCCTTGACTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LDFSYGVWGRPDSASHALLSMAL*MSLTVL Trigger: GAGCACAGTCAAGGACATTCACAATGCCATTGATAG...CAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR TCA 90 bp | GATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCCTATCAATGGCATTGTaGATGTCCTTGACTGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DMQCSVEVPWLLWSVRSSLSMAL*MSLTVL Trigger: GAGCACAGTCAAGGACATTCACAATGCCATTGATAG...GCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR TCA 90 bp | AACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCATCAAGTACCCCTCATaGGTGAACTCTTCCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NSTASHYLHPVLWGQGKAIKYPS*VNSSRA Trigger: GGCCCTGGAAGAGTTCACTCATGAGGGGTACTTGAT...GGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR GCA 90 bp | GTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTCAGTGTCTCTTCTCTTaGTTTGGCGATCACCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: VWGRPDSASHALLKRHCPQCLFS*FGDHQI Trigger: AATCTGGTGATCGCCAAAGCAAGAGAAGAGACACTG...AGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR GCA 90 bp | ACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCCACTTGGGCCAGTCATGGTCTTaGTCATACTCCAAGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TASHYLHPVLWGQGKAHLGQSWS*SYSKMA Trigger: TGCCATCTTGGAGTATGAGCAAGACCATGACTGGCC...CAAGTGGGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTACAGCTCCATGCTCCTaGTTACAGCGGCCTCCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSCYLVNKQYSLTLPTPSTAPCS*LQRPPG Trigger: CCCGGGAGGCCGCTGTAAGCAGGAGCATGGAGCTGT...ACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTCTCGGCGGTGTCTGCTaGTTGGCAAGGGTGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSCYLVNKQYSLTLPTPSLGGVC*LARVWE Trigger: CTCCCACACCCTTGCCAACCAGCAGACACCGCCGAG...ACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCTGAACATATTTCACTGTCCCCAACCAAGATAAGCCCAGGGCAGGATGCCACCTGCAGCTTCTaGAAGATCTCAGGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QCPEHISLSPTKISPGQDATCSF*KISGGR Trigger: CCTGCCCCCTGAGATCTTCCAGAAGCTGCAGGTGGC...ATCCTGCCCTGGGCTTATCTTGGTTGGGGACAGTGAAATATGTTCAGGACACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | AACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCGGAGGCCTTCTCCAGTaGTGTCAGCTCCTTCTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: NSTASHYLHPVLWGQGKAGGLLQ*CQLLLR Trigger: TCTAAGAAGGAGCTGACACCACTGGAGAAGGCCTCC...GGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | GTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTTCTCTTCTCTTGCTTTaGCGATCACCAGATTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VWGRPDSASHALLKRHCPSLLLL*RSPDSP Trigger: TGGAGAATCTGGTGATCGCCAAAGCAAGAGAAGAGA...AGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | GTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTGCAGAACCTCCTGTTaGCAGCCTCCTGAAGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VNKQYSLTLPTPSSLGAGCRTSC*QPPEGA Trigger: TGCGCCTTCAGGAGGCTGCCAACAGGAGGTTCTGCA...CCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | CCTGAACATATTTCACTGTCCCCAACCAAGATAAGCCCAGGGCAGGATGTCCTGCTGCTCCCGCTCCTCTaGGGTCAGAGCAACTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PEHISLSPTKISPGQDVLLLPLL*GQSNLT Trigger: AGTCAAGTTGCTCTGACCCCAGAGGAGCGGGAGCAG...CAGGACATCCTGCCCTGGGCTTATCTTGGTTGGGGACAGTGAAATATGTTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | CCCACACCAGATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGTGTTTTGGCCAGTCATaGTCTTGCTCATACTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PTPDMQCSVEVPWLLWSVCFGQS*SCSYSK Trigger: CTTGGAGTATGAGCAAGACCATGACTGGCCAAAACA...CACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATCTGGTGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| 3UTR CAA 72 bp | GAGCTTGGCTCTCCAGTGTTTTGGCCAGTCATGGTCTaGCTCATACTCCAAGATGGCAGCATAGAGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ELGSPVFWPVMV*LILQDGSIEGS Trigger: CGAGCCCTCTATGCTGCCATCTTGGAGTATGAGCAAGACCATGACTGGCCAAAACACTGGAGAGCCAAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTGGTGATCAGGAAGGCTaGGCAAGTGGGAGAGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GSCYLVNKQYSLTLPTPSGDQEG*ASGRAG Trigger: GCCTGCTCTCCCACTTGCTCAGCCTTCCTGATCACC...ACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR GCA 90 bp | AACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCGGCCAGTCATGGTCTTaGTCATACTCCAAGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NSTASHYLHPVLWGQGKAGQSWS*SYSKMA Trigger: TGCCATCTTGGAGTATGAGCAAGACCATGACTGGCC...GGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | GATCCTCAAAGGAGCTGTCCTTGTCTGGCAGGTGGGATAAAGCATCTACTAGGGTTGGTAGCTGTTGACTaGGCCCGCTCCAGACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: DPQRSCPCLAGGIKHLLGLVAVD*ARSRHC Trigger: ACAGTGTCTGGAGCGGGCCCAGTCAACAGCTACCAA...CCCTAGTAGATGCTTTATCCCACCTGCCAGACAAGGACAGCTCCTTTGAGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTGCCACCTGCAGCTTCTaGAAGATCTCAGGGGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSCYLVNKQYSLTLPTPSATCSF*KISGGR Trigger: CCTGCCCCCTGAGATCTTCCAGAAGCTGCAGGTGGC...ACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | CAGTGTCCTGAACATATTTCACTGTCCCCAACCAAGATAAGCCCAGGGCAGGATCTGCTCCCGCTCCTCTaGGGTCAGAGCAACTTGACT | + |
|
Preference number: 4 (lower is better) Translates to: QCPEHISLSPTKISPGQDLLPLL*GQSNLT Trigger: AGTCAAGTTGCTCTGACCCCAGAGGAGCGGGAGCAG...ATCCTGCCCTGGGCTTATCTTGGTTGGGGACAGTGAAATATGTTCAGGACACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCAGCCTCAGGAACTCGTaGGAGGAGCTTGGTGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QGSCYLVNKQYSLTLPTPSLRNS*EELGGD Trigger: ATCCCCACCAAGCTCCTCCCACGAGTTCCTGAGGCT...GGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR TCA 90 bp | CAATCAGTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTCTTCTTAGAGTTTTGTaGTTCTGCCACCTGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSVLQAPQGTAARFLLWGLLRVL*FCHLQL Trigger: AAGCTGCAGGTGGCAGAATCACAAAACTCTAAGAAG...ACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCACTGATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | CAATCAGTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTTGTTTTGGCCAGTCATaGTCTTGCTCATACTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSVLQAPQGTAARFLLWGCFGQS*SCSYSK Trigger: CTTGGAGTATGAGCAAGACCATGACTGGCCAAAACA...ACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCACTGATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | GTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGGGCTCTCCAGTGTTTTaGCCAGTCATGGTCTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VNKQYSLTLPTPSSLGAGGSPVF*PVMVLL Trigger: GAGCAAGACCATGACTGGCCAAAACACTGGAGAGCC...CCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCTTTGCTCCTGGGGTCTaGGGCTCAGACATAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: QGSCYLVNKQYSLTLPTPFAPGV*GSDIAK Trigger: TTTGGCTATGTCTGAGCCTCAGACCCCAGGAGCAAA...GGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTGACTGTGCTCTTCAGACACTCCAACAAGGGTTCCCTCTTTGCTCCTGGGCTTCTTAGAGTTTTGTaGTTCTGCCACCTGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLTVLFRHSNKGSLFAPGLLRVL*FCHLQL Trigger: AAGCTGCAGGTGGCAGAATCACAAAACTCTAAGAAG...CCCAGGAGCAAAGAGGGAACCCTTGTTGGAGTGTCTGAAGAGCACAGTCAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTTTTGCTCCTGGGGTCTaGGGCTCAGACATAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GSCYLVNKQYSLTLPTPSFAPGV*GSDIAK Trigger: TTTGGCTATGTCTGAGCCTCAGACCCCAGGAGCAAA...ACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTTCCGGGCCTCATATGTaGCCCTCAGCTTCTGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: GSCYLVNKQYSLTLPTPSSGPHM*PSASGF Trigger: AAAACCAGAAGCTGAGGGCCACATATGAGGCCCGGA...ACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| 3UTR CAA 72 bp | GCCAAAAACTGTTCCAGATCCTCAAAGGAGCTGTCCTaGTCTGGCAGGTGGGATAAAGCATCTACTAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AKNCSRSSKELS*SGRWDKASTRG Trigger: ACCCCTAGTAGATGCTTTATCCCACCTGCCAGACAAGGACAGCTCCTTTGAGGATCTGGAACAGTTTTTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| CDS-3UTR TCA 90 bp | CAGTGTCCTGAACATATTTCACTGTCCCCAACCAAGATAAGCCCAGGGCAGGATCTTCTTAGAGTTTTGTaGTTCTGCCACCTGCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QCPEHISLSPTKISPGQDLLRVL*FCHLQL Trigger: AAGCTGCAGGTGGCAGAATCACAAAACTCTAAGAAG...ATCCTGCCCTGGGCTTATCTTGGTTGGGGACAGTGAAATATGTTCAGGACACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCCAGTGTCTCTTCTCTTaGTTTGGCGATCACCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: QGSCYLVNKQYSLTLPTPQCLFS*FGDHQI Trigger: AATCTGGTGATCGCCAAAGCAAGAGAAGAGACACTG...GGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCTCTCTTCTCTTGCTTTaGCGATCACCAGATTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGSCYLVNKQYSLTLPTPSLLLL*RSPDSP Trigger: TGGAGAATCTGGTGATCGCCAAAGCAAGAGAAGAGA...GGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTCAGTGTCTCTTCTCTTaGTTTGGCGATCACCAGATT | + |
|
Preference number: 4 (lower is better) Translates to: GSCYLVNKQYSLTLPTPSQCLFS*FGDHQI Trigger: AATCTGGTGATCGCCAAAGCAAGAGAAGAGACACTG...ACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| 3UTR CAA 72 bp | CTAGACTCTGACATTGAAGAGTCTGTACAACTGTATTaGTTAGCCAGTGTCCTGAACATATTTCACTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LDSDIEESVQLY*LASVLNIFHCP Trigger: GGGACAGTGAAATATGTTCAGGACACTGGCTAACAAATACAGTTGTACAGACTCTTCAATGTCAGAGTCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS CCA 90 bp | GCCGGTTGCCGGTGTCTAGCTCGATGGCCTTGTTGGCCAGTTTCATaGCGCTCTGCAGTGGCTTCGCCCCGCCGTCCCCGGCCGCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: AGCRCLARWPCWPVS*RSAVASPRRPRPQR Trigger: CCGCTGCGGCCGGGGACGGCGGGGCGAAGCCACTGCAGAGCGCCATGAAACTGGCCAACAAGGCCATCGAGCTAGACACCGGCAACCGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS CCA 90 bp | ACGCTTCCCGGGGCCGGTTGCCGGTGTCTAGCTCGATGGCCTTGTTaGCCAGTTTCATGGCGCTCTGCAGTGGCTTCGCCCCGCCGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: TLPGAGCRCLARWPC*PVSWRSAVASPRRP Trigger: GGGACGGCGGGGCGAAGCCACTGCAGAGCGCCATGAAACTGGCCAACAAGGCCATCGAGCTAGACACCGGCAACCGGCCCCGGGAAGCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTACCTGGGCTTCCCGGGGCCGGTaGCCGGTGTCTAGCTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: AWAVTPGPAKANRAVATWASRGR*PVSSSM Trigger: CATCGAGCTAGACACCGGCAACCGGCCCCGGGAAGC...CCAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGGATTCACCCTCAGGCCTGGCCTCTTGGGCACGGCAGTAGTCTTCTGCGGCGGTGTCTGCTGGTaGGCAAGGGTGTGGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLGFTLRPGLLGTAVVFCGGVCW*ARVWEE Trigger: CTCCTCCCACACCCTTGCCAACCAGCAGACACCGCC...GCAGAAGACTACTGCCGTGCCCAAGAGGCCAGGCCTGAGGGTGAATCCCAGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
||
| CDS CCA 90 bp | GCCGCTGTAGAGACAGGGTCAGCGATGTCTTCTGCATGGCCTGGCTaGGGTCCAGACGGGCCATCCGGGCCTCATATGTGGCCCTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AAVETGSAMSSAWPG*GPDGPSGPHMWPSA Trigger: AGCTGAGGGCCACATATGAGGCCCGGATGGCCCGTCTGGACCCCAGCCAGGCCATGCAGAAGACATCGCTGACCCTGTCTCTACAGCGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS CCA 90 bp | CCCGCTCCTCTGGGGTCAGAGCAACTTGACTGCAGAACCTCCTGTTaGCAGCCTCCTGAAGGCGCAGGCGGCGCTCCTCCATCTTCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAPLGSEQLDCRTSC*QPPEGAGGAPPSSA Trigger: AGCGGAAGATGGAGGAGCGCCGCCTGCGCCTTCAGGAGGCTGCCAACAGGAGGTTCTGCAGTCAAGTTGCTCTGACCCCAGAGGAGCGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CAA 90 bp | GTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTGCTTCCCGGGGCCGGTaGCCGGTGTCTAGCTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: VWGRPDSASHALLKRHCPASRGR*PVSSSM Trigger: CATCGAGCTAGACACCGGCAACCGGCCCCGGGAAGC...AGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTAGGGCTTCCCGGGGCCGGTaGCCGGTGTCTAGCTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: WGRPDSASHALLKRHCPRASRGR*PVSSSM Trigger: CATCGAGCTAGACACCGGCAACCGGCCCCGGGAAGC...CCTAGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CAA 90 bp | ACCTTGGTAGGAGAAAGGCTCATAACCCAGGCCTGGGCAGTGACACCCGGGCCAGCTTCCCGGGGCCGGTaGCCGGTGTCTAGCTCGATG | + |
|
Preference number: 5 (lower is better) Translates to: TLVGERLITQAWAVTPGPASRGR*PVSSSM Trigger: CATCGAGCTAGACACCGGCAACCGGCCCCGGGAAGC...TGGCCCGGGTGTCACTGCCCAGGCCTGGGTTATGAGCCTTTCTCCTACCAAGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS CCA 90 bp | GCATGGCCTGGCTGGGGTCCAGACGGGCCATCCGGGCCTCATATGTaGCCCTCAGCTTCTGGTTTTGTAGGGAGGCCTTCTCCAGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AWPGWGPDGPSGPHM*PSASGFVGRPSPVV Trigger: CACCACTGGAGAAGGCCTCCCTACAAAACCAGAAGCTGAGGGCCACATATGAGGCCCGGATGGCCCGTCTGGACCCCAGCCAGGCCATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS CCA 90 bp | ATCTGCCGCTGTAGAGACAGGGTCAGCGATGTCTTCTGCATGGCCTaGCTGGGGTCCAGACGGGCCATCCGGGCCTCATATGTGGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ICRCRDRVSDVFCMA*LGSRRAIRASYVAL Trigger: GAGGGCCACATATGAGGCCCGGATGGCCCGTCTGGACCCCAGCCAGGCCATGCAGAAGACATCGCTGACCCTGTCTCTACAGCGGCAGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CAA 90 bp | GATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCGGCGGTGTCTGCTGGTaGGCAAGGGTGTGGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: DMQCSVEVPWLLWSVRSSGGVCW*ARVWEE Trigger: CTCCTCCCACACCCTTGCCAACCAGCAGACACCGCC...GCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS GCA 90 bp | AGTGGATGCTGCGCAGGTATTCCACGTACGCTTCCCGGGGCCGGTTaGCGGTGTCTAGCTCGATGGCCTTGTTGGCCAGTTTCATGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: SGCCAGIPRTLPGAG*RCLARWPCWPVSWR Trigger: GCGCCATGAAACTGGCCAACAAGGCCATCGAGCTAGACACCGGCAACCGGCCCCGGGAAGCGTACGTGGAATACCTGCGCAGCATCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CAA 90 bp | AGGGGGTGCGTTCCTGTACAGCTCCATGCTCCTGCTTACAGCGGCCTCCCGGGTAGCTCGATGGCCTTGTaGGCCAGTTTCATGGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RGCVPVQLHAPAYSGLPGSSMAL*ASFMAL Trigger: GAGCGCCATGAAACTGGCCAACAAGGCCATCGAGCT...ACCCGGGAGGCCGCTGTAAGCAGGAGCATGGAGCTGTACAGGAACGCACCCCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| CDS-3UTR CAA 90 bp | GTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGAGGCACTGTCCTGCCAGGCAGCGGTCTTaGGAGGTGGCTGTGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VWGRPDSASHALLKRHCPARQRS*EVAVFR Trigger: CCTGAACACAGCCACCTCCAAAGACCGCTGCCTGGC...AGGACAGTGCCTCTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CAA 90 bp | GATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCCTCAGGCCTGGCCTCTaGGGCACGGCAGTAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DMQCSVEVPWLLWSVRSSLRPGL*GTAVVF Trigger: GAAGACTACTGCCGTGCCCAAGAGGCCAGGCCTGAG...GCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CAA 90 bp | GTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTCTGGGGACAAGGGTTCCCTCTTaGCTCCTGGGGTCTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLQAPQGTAARFLLWGLGTRVPS*LLGSEA Trigger: AGCCTCAGACCCCAGGAGCAAAGAGGGAACCCTTGT...CCCCAGACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGGCCAGGCAGCGGTCTTaGGAGGTGGCTGTGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSYGVWGRPDSASHALLKARQRS*EVAVFR Trigger: CCTGAACACAGCCACCTCCAAAGACCGCTGCCTGGC...CTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS TCA 90 bp | ACTGCAGAACCTCCTGAGGAAGAAGATAGGCTGTTGGCAGCCTCCTaGAGGCGCAGGCGGCGCTCCTCCATCTTCCGCTGCAGTGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TAEPPEEEDRLLAAS*RRRRRSSIFRCSVS Trigger: AGAGACACTGCAGCGGAAGATGGAGGAGCGCCGCCTGCGCCTTCAGGAGGCTGCCAACAGCCTATCTTCTTCCTCAGGAGGTTCTGCAGT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155869.8 |
||
| CDS-3UTR CAA 90 bp | ATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGAGGTCCAGCCACCCAGCTTTAGCATCTTaGAGGTCTCAGGGGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: MQCSVEVPWLLWSVRSSHPALAS*RSQGAQ Trigger: CTGTGCCCCCTGAGACCTCAAAGATGCTAAAGCTGG...GTGGCTGGACCTCACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CAA 90 bp | AACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCGGCGGTGTCTGCTGGTaGGCAAGGGTGTGGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: NSTASHYLHPVLWGQGKAGGVCW*ARVWEE Trigger: CTCCTCCCACACCCTTGCCAACCAGCAGACACCGCC...GGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CAA 90 bp | CAGCTGGGGGAGGCCGCTTCTCAGCACCACGAAGGACAGGATGGGCAGCAAGTCTGGGGTCAGAGCAACTaGACTGCAGAACCTCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: QLGEAASQHHEGQDGQQVWGQSN*TAEPPV Trigger: AACAGGAGGTTCTGCAGTCAAGTTGCTCTGACCCCA...GACTTGCTGCCCATCCTGTCCTTCGTGGTGCTGAGAAGCGGCCTCCCCCAGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
||
| CDS-3UTR CAA 90 bp | GGGCTGGGATTCACCCTCAGGCCTGGCCTCTTGGGCACGGCAGTAGTCTTCTGCTGGCTCTCCAGTGTTTaGGCCAGTCATGGTCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GLGFTLRPGLLGTAVVFCWLSSV*ASHGLA Trigger: AGCAAGACCATGACTGGCCAAAACACTGGAGAGCCA...GCAGAAGACTACTGCCGTGCCCAAGAGGCCAGGCCTGAGGGTGAATCCCAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117643.9 |
||
| CDS-3UTR CAA 90 bp | CCCACACCAGATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGGGACTCCGCTTGAGCTaGGCTCTCCAGTGTTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PTPDMQCSVEVPWLLWSVGLRLS*ALQCFG Trigger: GCCAAAACACTGGAGAGCCAAGCTCAAGCGGAGTCC...CACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATCTGGTGTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS CCA 90 bp | ATACTCCAAGATGGCAGCATAGAGGGCTCGCTGCTCCCGCTCCTCTaGGGTCAGAGCAACTTGACTGCAGAACCTCCTGTTGGCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILQDGSIEGSLLPLL*GQSNLTAEPPVGSL Trigger: GAGGCTGCCAACAGGAGGTTCTGCAGTCAAGTTGCTCTGACCCCAGAGGAGCGGGAGCAGCGAGCCCTCTATGCTGCCATCTTGGAGTAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CAA 90 bp | ACCTTGGTAGGAGAAAGGCTCATAACCCAGGCCTGGGCAGTGACACCCGGGCCACCAGCTTTAGCATCTTaGAGGTCTCAGGGGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: TLVGERLITQAWAVTPGPPALAS*RSQGAQ Trigger: CTGTGCCCCCTGAGACCTCAAAGATGCTAAAGCTGG...TGGCCCGGGTGTCACTGCCCAGGCCTGGGTTATGAGCCTTTCTCCTACCAAGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CAA 90 bp | GTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTCTGGGGTGGGGTCAGAGCAACTaGACTGCAGAACCTCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VLQAPQGTAARFLLWGLGWGQSN*TAEPPV Trigger: AACAGGAGGTTCTGCAGTCAAGTTGCTCTGACCCCA...CCCCAGACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS-3UTR CAA 90 bp | ACCCAGGCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTTGGGGTCAGAGCAACTaGACTGCAGAACCTCCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TQAWAVTPGPAKANRAVAWGQSN*TAEPPV Trigger: AACAGGAGGTTCTGCAGTCAAGTTGCTCTGACCCCA...AGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGCCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CAA 90 bp | TTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATGCCCTGTTAAAGGGACTCCGCTTGAGCTaGGCTCTCCAGTGTTTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FSYGVWGRPDSASHALLKGLRLS*ALQCFG Trigger: GCCAAAACACTGGAGAGCCAAGCTCAAGCGGAGTCC...CTTTAACAGGGCATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS-3UTR CAA 90 bp | AACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCCTCAGGCCTGGCCTCTaGGGCACGGCAGTAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NSTASHYLHPVLWGQGKALRPGL*GTAVVF Trigger: GAAGACTACTGCCGTGCCCAAGAGGCCAGGCCTGAG...GGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS GCA 90 bp | TGTTTTCCACGTCTTCGAGCAATACCTGGGAGATGTAGTGGATGCTaGGCAGGTATTCCACGTACGCTTCCCGGGGCCGGTTGCCGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: CFPRLRAIPGRCSGC*AGIPRTLPGAGCRC Trigger: ACACCGGCAACCGGCCCCGGGAAGCGTACGTGGAATACCTGCGCAGCATCCACTACATCTCCCAGGTATTGCTCGAAGACGTGGAAAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS CCA 90 bp | GGCGGCGCTCCTCCATCTTCCGCTGCAGTGTCTCTTCTCTTGCTTTaGCGATCACCAGATTCTCCATCATCTGCCGCTGTAGAGACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: GGAPPSSAAVSLLLL*RSPDSPSSAAVETG Trigger: CCCTGTCTCTACAGCGGCAGATGATGGAGAATCTGGTGATCGCCAAAGCAAGAGAAGAGACACTGCAGCGGAAGATGGAGGAGCGCCGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS CCA 90 bp | CTCTCCAGTGTTTTGGCCAGTCATGGTCTTGCTCATACTCCAAGATaGCAGCATAGAGGGCTCGCTGCTCCCGCTCCTCTGGGGTCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSSVLASHGLAHTPR*QHRGLAAPAPLGSE Trigger: CTCTGACCCCAGAGGAGCGGGAGCAGCGAGCCCTCTATGCTGCCATCTTGGAGTATGAGCAAGACCATGACTGGCCAAAACACTGGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CAA 90 bp | GCCTGGGCAGTGACACCCGGGCCAGCAAAAGCAAACAGGGCAGTTGCTACCTGGGTCTCTTCTCTTGCTTaGGCGATCACCAGATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AWAVTPGPAKANRAVATWVSSLA*AITRFS Trigger: GGAGAATCTGGTGATCGCCAAAGCAAGAGAAGAGAC...CCAGGTAGCAACTGCCCTGTTTGCTTTTGCTGGCCCGGGTGTCACTGCCCAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CAA 90 bp | CAATCAGTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTACAAGGGTTCCCTCTTaGCTCCTGGGGTCTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: QSVLQAPQGTAARFLLWGTRVPS*LLGSEA Trigger: AGCCTCAGACCCCAGGAGCAAAGAGGGAACCCTTGT...ACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCACTGATTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS-3UTR CAA 90 bp | CAATCAGTGCTGCAGGCTCCCCAGGGAACGGCAGCTAGATTTCTCCTATGGGGTCCAGCTTTAGCATCTTaGAGGTCTCAGGGGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: QSVLQAPQGTAARFLLWGPALAS*RSQGAQ Trigger: CTGTGCCCCCTGAGACCTCAAAGATGCTAAAGCTGG...ACCCCATAGGAGAAATCTAGCTGCCGTTCCCTGGGGAGCCTGCAGCACTGATTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CAA 90 bp | CGGCAGCTAGATTTCTCCTATGGGGTCTGGGGCAGGCCTGACTCAGCCAGCCATGTCTCTTCTCTTGCTTaGGCGATCACCAGATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RQLDFSYGVWGRPDSASHVSSLA*AITRFS Trigger: GGAGAATCTGGTGATCGCCAAAGCAAGAGAAGAGAC...ATGGCTGGCTGAGTCAGGCCTGCCCCAGACCCCATAGGAGAAATCTAGCTGCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CAA 90 bp | CCCACACCAGATATGCAGTGCAGCGTGGAGGTCCCGTGGCTCCTTTGGTCTGTGGTCTCTTCTCTTGCTTaGGCGATCACCAGATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTPDMQCSVEVPWLLWSVVSSLA*AITRFS Trigger: GGAGAATCTGGTGATCGCCAAAGCAAGAGAAGAGAC...CACAGACCAAAGGAGCCACGGGACCTCCACGCTGCACTGCATATCTGGTGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS-3UTR CAA 90 bp | AACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCCCAGCTTTAGCATCTTaGAGGTCTCAGGGGGCACAG | + |
|
Preference number: 5 (lower is better) Translates to: NSTASHYLHPVLWGQGKAPALAS*RSQGAQ Trigger: CTGTGCCCCCTGAGACCTCAAAGATGCTAAAGCTGG...GGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CAA 90 bp | GGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTGGCGGTGTCTGCTGGTaGGCAAGGGTGTGGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: GSCYLVNKQYSLTLPTPSGGVCW*ARVWEE Trigger: CTCCTCCCACACCCTTGCCAACCAGCAGACACCGCC...ACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CAA 90 bp | GGATTCACCCTCAGGCCTGGCCTCTTGGGCACGGCAGTAGTCTTCTGCACAGATGTCTCTTCTCTTGCTTaGGCGATCACCAGATTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GFTLRPGLLGTAVVFCTDVSSLA*AITRFS Trigger: GGAGAATCTGGTGATCGCCAAAGCAAGAGAAGAGAC...ATCTGTGCAGAAGACTACTGCCGTGCCCAAGAGGCCAGGCCTGAGGGTGAATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000117643.9 ENSMUST00000155869.8 |
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| CDS-3UTR CAA 90 bp | ACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTAAAGCCCACTTGTGGCTCTCCAGTGTTTaGGCCAGTCATGGTCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TASHYLHPVLWGQGKAHLWLSSV*ASHGLA Trigger: AGCAAGACCATGACTGGCCAAAACACTGGAGAGCCA...CAAGTGGGCTTTACCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS-3UTR CAA 90 bp | CAGTGTCCTGAACATATTTCACTGTCCCCAACCAAGATAAGCCCAGGGCAGGATGCCAGGCAGCGGTCTTaGGAGGTGGCTGTGTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QCPEHISLSPTKISPGQDARQRS*EVAVFR Trigger: CCTGAACACAGCCACCTCCAAAGACCGCTGCCTGGC...ATCCTGCCCTGGGCTTATCTTGGTTGGGGACAGTGAAATATGTTCAGGACACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS CCA 90 bp | ACGGCTGGCTTCAGGCATATTCTCCCAAGCTTGGTAGCTGTTGACTaGGCCCGCTCCAGACACTGTTCAGCCAGCTTTAGCATCTTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: TAGFRHILPSLVAVD*ARSRHCSASFSIFE Trigger: CTCAAAGATGCTAAAGCTGGCTGAACAGTGTCTGGAGCGGGCCCAGTCAACAGCTACCAAGCTTGGGAGAATATGCCTGAAGCCAGCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CAA 90 bp | GTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGAGCTCGATGGCCTTGTaGGCCAGTTTCATGGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VNKQYSLTLPTPSSLGAGSSMAL*ASFMAL Trigger: GAGCGCCATGAAACTGGCCAACAAGGCCATCGAGCT...CCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CAA 90 bp | CCTGAACATATTTCACTGTCCCCAACCAAGATAAGCCCAGGGCAGGATGTCCTGACAAGGGTTCCCTCTTaGCTCCTGGGGTCTGAGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PEHISLSPTKISPGQDVLTRVPS*LLGSEA Trigger: AGCCTCAGACCCCAGGAGCAAAGAGGGAACCCTTGT...CAGGACATCCTGCCCTGGGCTTATCTTGGTTGGGGACAGTGAAATATGTTCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS GCA 90 bp | AGTGTCTCTTCTCTTGCTTTGGCGATCACCAGATTCTCCATCATCTaGCGCTGTAGAGACAGGGTCAGCGATGTCTTCTGCATGGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SVSSLALAITRFSII*RCRDRVSDVFCMAW Trigger: CCAGGCCATGCAGAAGACATCGCTGACCCTGTCTCTACAGCGGCAGATGATGGAGAATCTGGTGATCGCCAAAGCAAGAGAAGAGACACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CAA 90 bp | CAGGGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCAGCTCGATGGCCTTGTaGGCCAGTTTCATGGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QGSCYLVNKQYSLTLPTPSSMAL*ASFMAL Trigger: GAGCGCCATGAAACTGGCCAACAAGGCCATCGAGCT...GGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CAA 90 bp | GGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTAGCTCGATGGCCTTGTaGGCCAGTTTCATGGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GSCYLVNKQYSLTLPTPSSSMAL*ASFMAL Trigger: GAGCGCCATGAAACTGGCCAACAAGGCCATCGAGCT...ACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS-3UTR CAA 90 bp | GTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTTCTCTGGGGGCAGGGTGGCTCTCCAGTGTTTaGGCCAGTCATGGTCTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VNKQYSLTLPTPSSLGAGWLSSV*ASHGLA Trigger: AGCAAGACCATGACTGGCCAAAACACTGGAGAGCCA...CCCTGCCCCCAGAGAACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS-3UTR CAA 90 bp | GGCAGTTGCTACCTGGTAAATAAACAGTACAGCCTCACACTACCTACACCCAGTTCTAGCTCGATGGCCTaGTTGGCCAGTTTCATGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GSCYLVNKQYSLTLPTPSSSSMA*LASFMA Trigger: CGCCATGAAACTGGCCAACAAGGCCATCGAGCTAGA...ACTGGGTGTAGGTAGTGTGAGGCTGTACTGTTTATTTACCAGGTAGCAACTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS GCA 72 bp | AGCTCGATGGCCTTGTTGGCCAGTTTCATGGCGCTCTaGAGTGGCTTCGCCCCGCCGTCCCCGGCCGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SSMALLASFMAL*SGFAPPSPAAA Trigger: CGCTGCGGCCGGGGACGGCGGGGCGAAGCCACTGCAGAGCGCCATGAAACTGGCCAACAAGGCCATCGAGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS CAA 90 bp | TACGCTTCCCGGGGCCGGTTGCCGGTGTCTAGCTCGATGGCCTTGTaGGCCAGTTTCATGGCGCTCTGCAGTGGCTTCGCCCCGCCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: YASRGRLPVSSSMAL*ASFMALCSGFAPPS Trigger: GGACGGCGGGGCGAAGCCACTGCAGAGCGCCATGAAACTGGCCAACAAGGCCATCGAGCTAGACACCGGCAACCGGCCCCGGGAAGCGTA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS CAA 90 bp | ACGTACGCTTCCCGGGGCCGGTTGCCGGTGTCTAGCTCGATGGCCTaGTTGGCCAGTTTCATGGCGCTCTGCAGTGGCTTCGCCCCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: TYASRGRLPVSSSMA*LASFMALCSGFAPP Trigger: CGGCGGGGCGAAGCCACTGCAGAGCGCCATGAAACTGGCCAACAAGGCCATCGAGCTAGACACCGGCAACCGGCCCCGGGAAGCGTACGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS CCA 72 bp | GGGGCCGGTTGCCGGTGTCTAGCTCGATGGCCTTGTTaGCCAGTTTCATGGCGCTCTGCAGTGGCTTCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: GAGCRCLARWPC*PVSWRSAVASP Trigger: GGGCGAAGCCACTGCAGAGCGCCATGAAACTGGCCAACAAGGCCATCGAGCTAGACACCGGCAACCGGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS CAA 72 bp | CGGGGCCGGTTGCCGGTGTCTAGCTCGATGGCCTTGTaGGCCAGTTTCATGGCGCTCTGCAGTGGCTTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: RGRLPVSSSMAL*ASFMALCSGFA Trigger: GGCGAAGCCACTGCAGAGCGCCATGAAACTGGCCAACAAGGCCATCGAGCTAGACACCGGCAACCGGCCCCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS CCA 72 bp | GAGACAGGGTCAGCGATGTCTTCTGCATGGCCTGGCTaGGGTCCAGACGGGCCATCCGGGCCTCATATGTGG | + |
|
Preference number: 6 (lower is better) Translates to: ETGSAMSSAWPG*GPDGPSGPHMW Trigger: CCACATATGAGGCCCGGATGGCCCGTCTGGACCCCAGCCAGGCCATGCAGAAGACATCGCTGACCCTGTCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS CCA 72 bp | CTGGGGTCAGAGCAACTTGACTGCAGAACCTCCTGTTaGCAGCCTCCTGAAGGCGCAGGCGGCGCTCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LGSEQLDCRTSC*QPPEGAGGAPP Trigger: TGGAGGAGCGCCGCCTGCGCCTTCAGGAGGCTGCCAACAGGAGGTTCTGCAGTCAAGTTGCTCTGACCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
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| CDS CAA 72 bp | TCCCGGGGCCGGTTGCCGGTGTCTAGCTCGATGGCCTaGTTGGCCAGTTTCATGGCGCTCTGCAGTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SRGRLPVSSSMA*LASFMALCSGF Trigger: GAAGCCACTGCAGAGCGCCATGAAACTGGCCAACAAGGCCATCGAGCTAGACACCGGCAACCGGCCCCGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS CCA 72 bp | GGCTGGGGTCCAGACGGGCCATCCGGGCCTCATATGTaGCCCTCAGCTTCTGGTTTTGTAGGGAGGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: GWGPDGPSGPHM*PSASGFVGRPS Trigger: AGAAGGCCTCCCTACAAAACCAGAAGCTGAGGGCCACATATGAGGCCCGGATGGCCCGTCTGGACCCCAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS CAA 72 bp | GGCTCGCTGCTCCCGCTCCTCTGGGGTCAGAGCAACTaGACTGCAGAACCTCCTGTTGGCAGCCTCCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GSLLPLLWGQSN*TAEPPVGSLLK Trigger: CTTCAGGAGGCTGCCAACAGGAGGTTCTGCAGTCAAGTTGCTCTGACCCCAGAGGAGCGGGAGCAGCGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 |
||
| CDS CCA 72 bp | TGTAGAGACAGGGTCAGCGATGTCTTCTGCATGGCCTaGCTGGGGTCCAGACGGGCCATCCGGGCCTCATAT | + |
|
Preference number: 6 (lower is better) Translates to: CRDRVSDVFCMA*LGSRRAIRASY Trigger: ATATGAGGCCCGGATGGCCCGTCTGGACCCCAGCCAGGCCATGCAGAAGACATCGCTGACCCTGTCTCTACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS CAA 72 bp | GCAGGTACGGCTGGCTTCAGGCATATTCTCCCAAGCTaGGTAGCTGTTGACTGGGCCCGCTCCAGACACTGT | + |
|
Preference number: 6 (lower is better) Translates to: AGTAGFRHILPS*VAVDWARSRHC Trigger: ACAGTGTCTGGAGCGGGCCCAGTCAACAGCTACCAAGCTTGGGAGAATATGCCTGAAGCCAGCCGTACCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS CAA 90 bp | AGGCGGCGCTCCTCCATCTTCCGCTGCAGTGTCTCTTCTCTTGCTTaGGCGATCACCAGATTCTCCATCATCTGCCGCTGTAGAGACAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRRSSIFRCSVSSLA*AITRFSIICRCRDR Trigger: CCTGTCTCTACAGCGGCAGATGATGGAGAATCTGGTGATCGCCAAAGCAAGAGAAGAGACACTGCAGCGGAAGATGGAGGAGCGCCGCCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS CAA 72 bp | CCCGCTCCAGACACTGTTCAGCCAGCTTTAGCATCTTaGAGGTCTCAGGGGGCACAGTTTCCCCAGCTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PAPDTVQPALAS*RSQGAQFPQLL Trigger: CAGAAGCTGGGGAAACTGTGCCCCCTGAGACCTCAAAGATGCTAAAGCTGGCTGAACAGTGTCTGGAGCGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS TCA 72 bp | TGGCTTCAGGCATATTCTCCCAAGCTTGGTAGCTGTTaGCTGGGCCCGCTCCAGACACTGTTCAGCCAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: WLQAYSPKLGSC*LGPLQTLFSQL Trigger: AAGCTGGCTGAACAGTGTCTGGAGCGGGCCCAGTCAACAGCTACCAAGCTTGGGAGAATATGCCTGAAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS GCA 72 bp | GCGCTCCTCCATCTTCCGCTGCAGTGTCTCTTCTCTTaGTTTGGCGATCACCAGATTCTCCATCATCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: ALLHLPLQCLFS*FGDHQILHHLP Trigger: CGGCAGATGATGGAGAATCTGGTGATCGCCAAAGCAAGAGAAGAGACACTGCAGCGGAAGATGGAGGAGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
||
| CDS CAA 72 bp | GGCGCTCCTCCATCTTCCGCTGCAGTGTCTCTTCTCTaGCTTTGGCGATCACCAGATTCTCCATCATCTGCC | + |
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Preference number: 6 (lower is better) Translates to: GAPPSSAAVSLL*LWRSPDSPSSA Trigger: GGCAGATGATGGAGAATCTGGTGATCGCCAAAGCAAGAGAAGAGACACTGCAGCGGAAGATGGAGGAGCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS CCA 72 bp | TTCAGGCATATTCTCCCAAGCTTGGTAGCTGTTGACTaGGCCCGCTCCAGACACTGTTCAGCCAGCTTTAGC | + |
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Preference number: 6 (lower is better) Translates to: FRHILPSLVAVD*ARSRHCSASFS Trigger: GCTAAAGCTGGCTGAACAGTGTCTGGAGCGGGCCCAGTCAACAGCTACCAAGCTTGGGAGAATATGCCTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS GCA 72 bp | TCTCTTGCTTTGGCGATCACCAGATTCTCCATCATCTaGCGCTGTAGAGACAGGGTCAGCGATGTCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SLALAITRFSII*RCRDRVSDVFC Trigger: GCAGAAGACATCGCTGACCCTGTCTCTACAGCGGCAGATGATGGAGAATCTGGTGATCGCCAAAGCAAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS CCA 72 bp | CCTCCATCTTCCGCTGCAGTGTCTCTTCTCTTGCTTTaGCGATCACCAGATTCTCCATCATCTGCCGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: PPSSAAVSLLLL*RSPDSPSSAAV Trigger: TACAGCGGCAGATGATGGAGAATCTGGTGATCGCCAAAGCAAGAGAAGAGACACTGCAGCGGAAGATGGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS CAA 72 bp | TCCTCCATCTTCCGCTGCAGTGTCTCTTCTCTTGCTTaGGCGATCACCAGATTCTCCATCATCTGCCGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SSIFRCSVSSLA*AITRFSIICRC Trigger: ACAGCGGCAGATGATGGAGAATCTGGTGATCGCCAAAGCAAGAGAAGAGACACTGCAGCGGAAGATGGAGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS TCA 72 bp | CTTCTCCAGTGGTGTCAGCTCCTTCTTAGAGTTTTGTaGTTCTGCCACCTGCAGCTTCTGGAAGATCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: LLQWCQLLLRVL*FCHLQLLEDLR Trigger: CCTGAGATCTTCCAGAAGCTGCAGGTGGCAGAATCACAAAACTCTAAGAAGGAGCTGACACCACTGGAGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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| CDS CCA 72 bp | TTCTTAGAGTTTTGTGATTCTGCCACCTGCAGCTTCTaGAAGATCTCAGGGGGCAGGAAAGGAGACAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: FLEFCDSATCSF*KISGGRKGDSF Trigger: GAAGCTGTCTCCTTTCCTGCCCCCTGAGATCTTCCAGAAGCTGCAGGTGGCAGAATCACAAAACTCTAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000117643.9 ENSMUST00000118279.2 ENSMUST00000122363.8 ENSMUST00000155869.8 |
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