Pregenerated sensors for VPS54 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020128Ensembl transcript IDs: ENSMUST00000006221.14, ENSMUST00000109578.8, ENSMUST00000132017.2
Found 199 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR TCA 90 bp | TCCTTACTCAGGGATGCACAGAATGGCTTTCTCTGTAGATCCCACTaGATCCAGTTCCCAACACTGATCCTTCTTTTCCCTTCCCCCACC | + |
Preference number: 1 (lower is better) Translates to: SLLRDAQNGFLCRSH*IQFPTLILLFPSPT Trigger: GGTGGGGGAAGGGAAAAGAAGGATCAGTGTTGGGAACTGGATTCAGTGGGATCTACAGAGAAAGCCATTCTGTGCATCCCTGAGTAAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
3UTR TCA 90 bp | AACCTGAGTCTGTTTCCAGAGAGAATGAAAAATGTTATAGACACCTaGTCACTTGCTCCTTACTCAGGGATGCACAGAATGGCTTTCTCT | + |
Preference number: 1 (lower is better) Translates to: NLSLFPERMKNVIDT*SLAPYSGMHRMAFS Trigger: AGAGAAAGCCATTCTGTGCATCCCTGAGTAAGGAGCAAGTGATCAGGTGTCTATAACATTTTTCATTCTCTCTGGAAACAGACTCAGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
3UTR-3UTR CCA 90 bp | AACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGATTCTTGGTGTGAGACACCAGAAACACATCCCGTaGTCAGATGAACGACCTGGG | + |
Preference number: 2 (lower is better) Translates to: NHKIRHSDRLGKILGVRHQKHIP*SDERPG Trigger: CCCAGGTCGTTCATCTGACCACGGGATGTGTTTCTG...GTGTCTCACACCAAGAATCTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
3UTR-3UTR CCA 90 bp | AACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGATTCTTGGTGTGAGACACCCACCTCAGTCACTTTaGGTCCCAGGTTCAGTTCCT | + |
Preference number: 2 (lower is better) Translates to: NHKIRHSDRLGKILGVRHPPQSL*VPGSVP Trigger: AGGAACTGAACCTGGGACCCAAAGTGACTGAGGTGG...GTGTCTCACACCAAGAATCTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
3UTR-3UTR TCA 90 bp | AGGCAGCTACAGCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAATCCAGTTCCCAACACTaGTCCTTCTTTTCCCTTCCC | + |
Preference number: 2 (lower is better) Translates to: RQLQLCYSYVFFWIWSKESSSQH*SFFSLP Trigger: GGGAAGGGAAAAGAAGGATCAGTGTTGGGAACTGGA...TTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGCTGTAGCTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
3UTR-3UTR TCA 90 bp | GCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGTCCAGTTCCCAACACTaGTCCTTCTTTTCCCTTCCC | + |
Preference number: 2 (lower is better) Translates to: AVLQLCVLLDLVQRNLSLSSSQH*SFFSLP Trigger: GGGAAGGGAAAAGAAGGATCAGTGTTGGGAACTGGA...CAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
3UTR-3UTR GCA 90 bp | AGGCAGCTACAGCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAACTCCTTACTCAGGGATaGACAGAATGGCTTTCTCTG | + |
Preference number: 2 (lower is better) Translates to: RQLQLCYSYVFFWIWSKELLTQG*TEWLSL Trigger: CAGAGAAAGCCATTCTGTGCATCCCTGAGTAAGGAG...TTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGCTGTAGCTGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
3UTR-3UTR CCA 90 bp | GTTTCCAGAGAGAATGAAAAATGTTATAGACACCTGATCACTTGCTCCTTACTCCAGAAACACATCCCGTaGTCAGATGAACGACCTGGG | + |
Preference number: 2 (lower is better) Translates to: VSRENEKCYRHLITCSLLQKHIP*SDERPG Trigger: CCCAGGTCGTTCATCTGACCACGGGATGTGTTTCTG...GAGTAAGGAGCAAGTGATCAGGTGTCTATAACATTTTTCATTCTCTCTGGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
3UTR-3UTR CCA 90 bp | TTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGAATGAAAAATGTTCAGAAACACATCCCGTaGTCAGATGAACGACCTGGG | + |
Preference number: 2 (lower is better) Translates to: LDLVQRNLSLFPERMKNVQKHIP*SDERPG Trigger: CCCAGGTCGTTCATCTGACCACGGGATGTGTTTCTG...AACATTTTTCATTCTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
3UTR-3UTR CAA 90 bp | AGGCAGCTACAGCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAACCCACCTCAGTCACTTaGGGTCCCAGGTTCAGTTCC | + |
Preference number: 3 (lower is better) Translates to: RQLQLCYSYVFFWIWSKEPTSVT*GPRFSS Trigger: GGAACTGAACCTGGGACCCAAAGTGACTGAGGTGGG...TTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGCTGTAGCTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
3UTR TCA 72 bp | AGGGATGCACAGAATGGCTTTCTCTGTAGATCCCACTaGATCCAGTTCCCAACACTGATCCTTCTTTTCCCT | + |
Preference number: 3 (lower is better) Translates to: RDAQNGFLCRSH*IQFPTLILLFP Trigger: AGGGAAAAGAAGGATCAGTGTTGGGAACTGGATTCAGTGGGATCTACAGAGAAAGCCATTCTGTGCATCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
3UTR-3UTR CAA 90 bp | GTACCATCATTAAATAAGGTGGGACACCATATGAATTTCATTGCACTGGAAGAACCCACCTCAGTCACTTaGGGTCCCAGGTTCAGTTCC | + |
Preference number: 3 (lower is better) Translates to: VPSLNKVGHHMNFIALEEPTSVT*GPRFSS Trigger: GGAACTGAACCTGGGACCCAAAGTGACTGAGGTGGG...TTCTTCCAGTGCAATGAAATTCATATGGTGTCCCACCTTATTTAATGATGGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
3UTR-3UTR CAA 90 bp | AACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGATTCTTGGTGTGAGACACCATATATTTAACAGTTaGAGGCTTTTACCCAGTGAC | + |
Preference number: 3 (lower is better) Translates to: NHKIRHSDRLGKILGVRHHIFNS*RLLPSD Trigger: GTCACTGGGTAAAAGCCTCAAACTGTTAAATATATG...GTGTCTCACACCAAGAATCTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
3UTR GCA 72 bp | AGAGAGAATGAAAAATGTTATAGACACCTGATCACTTaGTCCTTACTCAGGGATGCACAGAATGGCTTTCTC | + |
Preference number: 3 (lower is better) Translates to: RENEKCYRHLIT*SLLRDAQNGFL Trigger: GAGAAAGCCATTCTGTGCATCCCTGAGTAAGGAGCAAGTGATCAGGTGTCTATAACATTTTTCATTCTCTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | TTCTTCAGAAACACATCCCGTGGTCAGATGAACGACCTGGGTCTCCAGTCTGTCAAGGGCCCCAAGCAGTaGCGTGCTCTTCCTCCCACA | + |
Preference number: 4 (lower is better) Translates to: FFRNTSRGQMNDLGLQSVKGPKQ*RALPPT Trigger: TGTGGGAGGAAGAGCACGTCACTGCTTGGGGCCCTT...GACAGACTGGAGACCCAGGTCGTTCATCTGACCACGGGATGTGTTTCTGAAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | ATCCCACTGAATCCAGTTCCCAACACTGATCCTTCTTTTCCCTTCCCCCACCTCAAGGGCCCCAAGCAGTaGCGTGCTCTTCCTCCCACA | + |
Preference number: 4 (lower is better) Translates to: IPLNPVPNTDPSFPFPHLKGPKQ*RALPPT Trigger: TGTGGGAGGAAGAGCACGTCACTGCTTGGGGCCCTT...GAGGTGGGGGAAGGGAAAAGAAGGATCAGTGTTGGGAACTGGATTCAGTGGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | TTCTTCAGAAACACATCCCGTGGTCAGATGAACGACCTGGGTCTCCAGTCTGTCTGGAGGAGCACACGCTaGTGTCTGCTCCTTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: FFRNTSRGQMNDLGLQSVWRSTR*CLLLAG Trigger: TCCAGCAAGGAGCAGACATCAGCGTGTGCTCCTCCA...GACAGACTGGAGACCCAGGTCGTTCATCTGACCACGGGATGTGTTTCTGAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | CCACCTCAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGCTGTGGGAGGTAGAGTaGAGGTATGACTTCAGTGTC | + |
Preference number: 4 (lower is better) Translates to: PPQSLWVPGSVPNTPGIQLWEVE*RYDFSV Trigger: GACACTGAAGTCATACCTTCACTCTACCTCCCACAG...CTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTGAGGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR TCA 90 bp | CACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCAAAGGGCCCCAAGCAGTaGCGTGCTCTTCCTCCCACA | + |
Preference number: 4 (lower is better) Translates to: HFGSQVQFLTHQASRFSSKGPKQ*RALPPT Trigger: TGTGGGAGGAAGAGCACGTCACTGCTTGGGGCCCTT...TGAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | CAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCAGTCGGGCTTCAAAGTaGGCCCGGATCACGGGAATG | + |
Preference number: 4 (lower is better) Translates to: QSLWVPGSVPNTPGIQIFSRASK*ARITGM Trigger: CATTCCCGTGATCCGGGCTCACTTTGAAGCCCGACT...GAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | GGCATCCAGATTTTCTTCAGAAACACATCCCGTGGTCAGATGAACGACCTGGGTACCTGCACTGTAGGCTaGGTTTGGTGTACAGTGGCC | + |
Preference number: 4 (lower is better) Translates to: GIQIFFRNTSRGQMNDLGTCTVG*VWCTVA Trigger: GGCCACTGTACACCAAACTCAGCCTACAGTGCAGGT...ACCCAGGTCGTTCATCTGACCACGGGATGTGTTTCTGAAGAAAATCTGGATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | TCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCGCCGGAAGCTGTGAATaGCCTGAAGCTCCTGCTGCA | + |
Preference number: 4 (lower is better) Translates to: SLWVPGSVPNTPGIQIFFAGSCE*PEAPAA Trigger: TGCAGCAGGAGCTTCAGGGCATTCACAGCTTCCGGC...GAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | CTCAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTATCAACCGCCGCAGATaGTGGCTCACCCTCACTGAA | + |
Preference number: 4 (lower is better) Translates to: LSHFGSQVQFLTHQASRFINRRR*WLTLTE Trigger: TTCAGTGAGGGTGAGCCAGCATCTGCGGCGGTTGAT...AAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | CCACCTCAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGAGTACATTCTGGTTCTaGTACCGAATCACTGCTGCA | + |
Preference number: 4 (lower is better) Translates to: PPQSLWVPGSVPNTPGIQSTFWF*YRITAA Trigger: TGCAGCAGTGATTCGGTATCAGAACCAGAATGTACT...CTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTGAGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | CACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCAATCAACCGCCGCAGATaGTGGCTCACCCTCACTGAA | + |
Preference number: 4 (lower is better) Translates to: HFGSQVQFLTHQASRFSSINRRR*WLTLTE Trigger: TTCAGTGAGGGTGAGCCAGCATCTGCGGCGGTTGAT...TGAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | CAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCATACCGAATCACTGCTaGAGGGCTCGCTATGTGGAG | + |
Preference number: 4 (lower is better) Translates to: QSLWVPGSVPNTPGIQIFIPNHC*RARYVE Trigger: CTCCACATAGCGAGCCCTGCAGCAGTGATTCGGTAT...GAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | TCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCCACCTGTGGGTTCCTTaGGACACACATCTGGCAGTG | + |
Preference number: 4 (lower is better) Translates to: SLWVPGSVPNTPGIQIFFHLWVP*DTHLAV Trigger: CACTGCCAGATGTGTGTCCCAAGGAACCCACAGGTG...GAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006221.14 |
||
CDS-3UTR TCA 90 bp | AACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGATTCTTGGTGTGAGACACACCTGCACTGTAGGCTaGGTTTGGTGTACAGTGGCC | + |
Preference number: 4 (lower is better) Translates to: NHKIRHSDRLGKILGVRHTCTVG*VWCTVA Trigger: GGCCACTGTACACCAAACTCAGCCTACAGTGCAGGT...GTGTCTCACACCAAGAATCTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR GCA 90 bp | AGTCTTCAGATAGCTTACTCATCAACCTTGTATTTCTGGCCCCAACACAGCAGCATCAACCGCCGCAGATaGTGGCTCACCCTCACTGAA | + |
Preference number: 4 (lower is better) Translates to: SLQIAYSSTLYFWPQHSSINRRR*WLTLTE Trigger: TTCAGTGAGGGTGAGCCAGCATCTGCGGCGGTTGAT...GCTGCTGTGTTGGGGCCAGAAATACAAGGTTGATGAGTAAGCTATCTGAAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR GCA 90 bp | CACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCAATACCGAATCACTGCTaGAGGGCTCGCTATGTGGAG | + |
Preference number: 4 (lower is better) Translates to: HFGSQVQFLTHQASRFSSIPNHC*RARYVE Trigger: CTCCACATAGCGAGCCCTGCAGCAGTGATTCGGTAT...TGAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | TCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCGCAGGAACATCAGCCTaGTTCCAACGCTCGTTGTCT | + |
Preference number: 4 (lower is better) Translates to: SLWVPGSVPNTPGIQIFFAGTSA*FQRSLS Trigger: AGACAACGAGCGTTGGAAGCAGGCTGATGTTCCTGC...GAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | CTCAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTGCAGGGCTCGCTATGTaGAGACGTGTTTCTTTGAGA | + |
Preference number: 4 (lower is better) Translates to: LSHFGSQVQFLTHQASRFAGLAM*RRVSLR Trigger: TCTCAAAGAAACACGTCTCCACATAGCGAGCCCTGC...AAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | ATCCCACTGAATCCAGTTCCCAACACTGATCCTTCTTTTCCCTTCCCCCACCTCCCGACAACTGCATACTaGTGTCCCTCAACAACAAGA | + |
Preference number: 4 (lower is better) Translates to: IPLNPVPNTDPSFPFPHLPTTAY*CPSTTR Trigger: TCTTGTTGTTGAGGGACACCAGTATGCAGTTGTCGG...GAGGTGGGGGAAGGGAAAAGAAGGATCAGTGTTGGGAACTGGATTCAGTGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | ATCCCACTGAATCCAGTTCCCAACACTGATCCTTCTTTTCCCTTCCCCCACCTCGCTTACAAATATTCCTaGAACACGGGGAAGGAACAG | + |
Preference number: 4 (lower is better) Translates to: IPLNPVPNTDPSFPFPHLAYKYS*NTGKEQ Trigger: CTGTTCCTTCCCCGTGTTTCAGGAATATTTGTAAGC...GAGGTGGGGGAAGGGAAAAGAAGGATCAGTGTTGGGAACTGGATTCAGTGGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | AGGCAGCTACAGCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAGCCGGAAGCTGTGAATaGCCTGAAGCTCCTGCTGCA | + |
Preference number: 4 (lower is better) Translates to: RQLQLCYSYVFFWIWSKEAGSCE*PEAPAA Trigger: TGCAGCAGGAGCTTCAGGGCATTCACAGCTTCCGGC...TTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGCTGTAGCTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | AACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGATTCTTGGTGTGAGACACGCAGGAACATCAGCCTaGTTCCAACGCTCGTTGTCT | + |
Preference number: 4 (lower is better) Translates to: NHKIRHSDRLGKILGVRHAGTSA*FQRSLS Trigger: AGACAACGAGCGTTGGAAGCAGGCTGATGTTCCTGC...GTGTCTCACACCAAGAATCTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR CCA 90 bp | TCACTTGCTCCTTACTCAGGGATGCACAGAATGGCTTTCTCTGTAGATCCCACTTTTCCTGAAGCAACTTaGAAGAAGCTGCGTCGCGAC | + |
Preference number: 4 (lower is better) Translates to: SLAPYSGMHRMAFSVDPTFPEAT*KKLRRD Trigger: GTCGCGACGCAGCTTCTTCCAAGTTGCTTCAGGAAA...AGTGGGATCTACAGAGAAAGCCATTCTGTGCATCCCTGAGTAAGGAGCAAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | TGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCAGAAACGCAGGGCTCGCTATGTaGAGACGTGTTTCTTTGAGA | + |
Preference number: 4 (lower is better) Translates to: WVPGSVPNTPGIQIFFRNAGLAM*RRVSLR Trigger: TCTCAAAGAAACACGTCTCCACATAGCGAGCCCTGC...GTTTCTGAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | CAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCCCGACAACTGCATACTaGTGTCCCTCAACAACAAGA | + |
Preference number: 4 (lower is better) Translates to: QSLWVPGSVPNTPGIQIFPTTAY*CPSTTR Trigger: TCTTGTTGTTGAGGGACACCAGTATGCAGTTGTCGG...GAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | AGGCAGCTACAGCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAGCATGCTCCATTGCTTaGGGGGCAGTCGGGCTTCAA | + |
Preference number: 4 (lower is better) Translates to: RQLQLCYSYVFFWIWSKEACSIA*GAVGLQ Trigger: TTGAAGCCCGACTGCCCCCCAAGCAATGGAGCATGC...TTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGCTGTAGCTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | TGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCAGAAACTGGCTCAGCTTTTCCTaGAGCAACTTGGAAGAAGCT | + |
Preference number: 4 (lower is better) Translates to: WVPGSVPNTPGIQIFFRNWLSFS*SNLEEA Trigger: AGCTTCTTCCAAGTTGCTTCAGGAAAAGCTGAGCCA...GTTTCTGAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | AGGCAGCTACAGCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGCACTGTAGGCTaGGTTTGGTGTACAGTGGCC | + |
Preference number: 4 (lower is better) Translates to: RQLQLCYSYVFFWIWSKETCTVG*VWCTVA Trigger: GGCCACTGTACACCAAACTCAGCCTACAGTGCAGGT...TTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGCTGTAGCTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | CAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTGCTGCAGAACCTCTTaGGTTGTTGCTATTAAGTCC | + |
Preference number: 4 (lower is better) Translates to: QSLWVPGSVPNTPGIQIFCCRTS*VVAIKS Trigger: GGACTTAATAGCAACAACTCAAGAGGTTCTGCAGCA...GAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | AGTCTTCAGATAGCTTACTCATCAACCTTGTATTTCTGGCCCCAACACAGCAGCGGAGACGTGTTTCTTTaGGAGGTAGTATCAACCGCC | + |
Preference number: 4 (lower is better) Translates to: SLQIAYSSTLYFWPQHSSGDVFL*EVVSTA Trigger: GGCGGTTGATACTACCTCTCAAAGAAACACGTCTCC...GCTGCTGTGTTGGGGCCAGAAATACAAGGTTGATGAGTAAGCTATCTGAAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR TCA 90 bp | CAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCAGTACATTCTGGTTCTaGTACCGAATCACTGCTGCA | + |
Preference number: 4 (lower is better) Translates to: QSLWVPGSVPNTPGIQIFSTFWF*YRITAA Trigger: TGCAGCAGTGATTCGGTATCAGAACCAGAATGTACT...GAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | CTCAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTACCGTCCTTTGCTCTTaGCATGAGAAATTTGACAGC | + |
Preference number: 4 (lower is better) Translates to: LSHFGSQVQFLTHQASRFTVLCS*HEKFDS Trigger: GCTGTCAAATTTCTCATGTCAAGAGCAAAGGACGGT...AAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | CTCAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTGCTTACAAATATTCCTaGAACACGGGGAAGGAACAG | + |
Preference number: 4 (lower is better) Translates to: LSHFGSQVQFLTHQASRFAYKYS*NTGKEQ Trigger: CTGTTCCTTCCCCGTGTTTCAGGAATATTTGTAAGC...AAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | GATTCTTGGTGTGAGACACAGGCACTTTCATTTGTAGAGTGCTGCCGATTCTGGAAGCTACATCTGCTGTaGCCAACCCATTTTGAGGTC | + |
Preference number: 4 (lower is better) Translates to: DSWCETQALSFVECCRFWKLHLL*PTHFEV Trigger: GACCTCAAAATGGGTTGGTCACAGCAGATGTAGCTT...CCAGAATCGGCAGCACTCTACAAATGAAAGTGCCTGTGTCTCACACCAAGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR TCA 90 bp | TCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCAAGCTACATCTGCTGTaGCCAACCCATTTTGAGGTC | + |
Preference number: 4 (lower is better) Translates to: SLWVPGSVPNTPGIQIFFKLHLL*PTHFEV Trigger: GACCTCAAAATGGGTTGGTCACAGCAGATGTAGCTT...GAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | TCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCGTTCACAAACTTATTTaGTTGGCTCTGAAGGGCCCC | + |
Preference number: 4 (lower is better) Translates to: SLWVPGSVPNTPGIQIFFVHKLI*LALKGP Trigger: GGGGCCCTTCAGAGCCAAGCAAATAAGTTTGTGAAC...GAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | GTACATTATAACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGATTCTTGGTGCATGCTCCATTGCTTaGGGGGCAGTCGGGCTTCAA | + |
Preference number: 4 (lower is better) Translates to: VHYNHKIRHSDRLGKILGACSIA*GAVGLQ Trigger: TTGAAGCCCGACTGCCCCCCAAGCAATGGAGCATGC...ACCAAGAATCTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTTATAATGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR TCA 90 bp | GATTCTTGGTGTGAGACACAGGCACTTTCATTTGTAGAGTGCTGCCGATTCTGGGGTAGAGTGAAGGTATaGCTTCAGTGTCCACAAAGT | + |
Preference number: 4 (lower is better) Translates to: DSWCETQALSFVECCRFWGRVKV*LQCPQS Trigger: ACTTTGTGGACACTGAAGTCATACCTTCACTCTACC...CCAGAATCGGCAGCACTCTACAAATGAAAGTGCCTGTGTCTCACACCAAGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR TCA 90 bp | AGACACCTGATCACTTGCTCCTTACTCAGGGATGCACAGAATGGCTTTCTCTGTCGTAGAGAGATCTGGTaGGCAATGTTTACTTCCACA | + |
Preference number: 4 (lower is better) Translates to: RHLITCSLLRDAQNGFLCRREIW*AMFTST Trigger: TGTGGAAGTAAACATTGCTCACCAGATCTCTCTACG...ACAGAGAAAGCCATTCTGTGCATCCCTGAGTAAGGAGCAAGTGATCAGGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | TGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCAGAAACTGCTGCAGAACCTCTTaGGTTGTTGCTATTAAGTCC | + |
Preference number: 4 (lower is better) Translates to: WVPGSVPNTPGIQIFFRNCCRTS*VVAIKS Trigger: GGACTTAATAGCAACAACTCAAGAGGTTCTGCAGCA...GTTTCTGAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | CAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCGCTTTTCTCAAGAACTaGCAGAACAACACTGTGGAT | + |
Preference number: 4 (lower is better) Translates to: QSLWVPGSVPNTPGIQIFAFLKN*QNNTVD Trigger: ATCCACAGTGTTGTTCTGTCAGTTCTTGAGAAAAGC...GAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | TCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCACCGTCCTTTGCTCTTaGCATGAGAAATTTGACAGC | + |
Preference number: 4 (lower is better) Translates to: SLWVPGSVPNTPGIQIFFTVLCS*HEKFDS Trigger: GCTGTCAAATTTCTCATGTCAAGAGCAAAGGACGGT...GAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | GCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGTTATTTGCTTGGCTCTaGAGGGCCCCAAGCAGTGAC | + |
Preference number: 4 (lower is better) Translates to: AVLQLCVLLDLVQRNLSLLFAWL*RAPSSD Trigger: GTCACTGCTTGGGGCCCTTCAGAGCCAAGCAAATAA...CAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | GGCATCCAGATTTTCTTCAGAAACACATCCCGTGGTCAGATGAACGACCTGGGTGGCAACTTCTTGAATTaGAGTACTTCAGCAGATCTG | + |
Preference number: 4 (lower is better) Translates to: GIQIFFRNTSRGQMNDLGGNFLN*STSADL Trigger: CAGATCTGCTGAAGTACTTCAATTCAAGAAGTTGCC...ACCCAGGTCGTTCATCTGACCACGGGATGTGTTTCTGAAGAAAATCTGGATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | TCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCGTGACCAACCCATTTTaGGGTCCTCCGTCATTTATT | + |
Preference number: 4 (lower is better) Translates to: SLWVPGSVPNTPGIQIFFVTNPF*GPPSFI Trigger: AATAAATGACGGAGGACCTCAAAATGGGTTGGTCAC...GAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | TCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCACATCTGGCAGTGACTaGACAGGTCGAATGTGTTTT | + |
Preference number: 4 (lower is better) Translates to: SLWVPGSVPNTPGIQIFFTSGSD*TGRMCF Trigger: AAAACACATTCGACCTGTGCAGTCACTGCCAGATGT...GAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR GCA 90 bp | CTCAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTTTAGTCCAACAACTTaGAAAGCACCAGCTCCAAGA | + |
Preference number: 4 (lower is better) Translates to: LSHFGSQVQFLTHQASRFFSPTT*KAPAPR Trigger: TCTTGGAGCTGGTGCTTTGCAAGTTGTTGGACTAAA...AAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTGAG 47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | TTCTTCAGAAACACATCCCGTGGTCAGATGAACGACCTGGGTCTCCAGTCTGTCGTAAAAAGCTACATCTaGTGTGACCAACCCATTTTG | + |
Preference number: 4 (lower is better) Translates to: FFRNTSRGQMNDLGLQSVVKSYI*CDQPIL Trigger: CAAAATGGGTTGGTCACAGCAGATGTAGCTTTTTAC...GACAGACTGGAGACCCAGGTCGTTCATCTGACCACGGGATGTGTTTCTGAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | TTCTTCAGAAACACATCCCGTGGTCAGATGAACGACCTGGGTCTCCAGTCTGTCGCTCCAAGAACTAACTaGCAACTTCTTGAATTGAAG | + |
Preference number: 4 (lower is better) Translates to: FFRNTSRGQMNDLGLQSVAPRTN*QLLELK Trigger: CTTCAATTCAAGAAGTTGCCAGTTAGTTCTTGGAGC...GACAGACTGGAGACCCAGGTCGTTCATCTGACCACGGGATGTGTTTCTGAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | TGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCAGAAACCGCTCTTCTAAAACTTaGCATTCACCTTCCAGTGGT | + |
Preference number: 4 (lower is better) Translates to: WVPGSVPNTPGIQIFFRNRSSKT*HSPSSG Trigger: ACCACTGGAAGGTGAATGCCAAGTTTTAGAAGAGCG...GTTTCTGAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | GTACATTATAACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGATTCTTGGTACACACATCTGGCAGTaGCTGCACAGGTCGAATGTG | + |
Preference number: 4 (lower is better) Translates to: VHYNHKIRHSDRLGKILGTHIWQ*LHRSNV Trigger: CACATTCGACCTGTGCAGTCACTGCCAGATGTGTGT...ACCAAGAATCTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTTATAATGTAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR TCA 90 bp | TTCTTCAGAAACACATCCCGTGGTCAGATGAACGACCTGGGTCTCCAGTCTGTCATCCCCAAGTTTTTGTaGAGAAGTCAGATTCTCTTT | + |
Preference number: 4 (lower is better) Translates to: FFRNTSRGQMNDLGLQSVIPKFL*RSQILF Trigger: AAAGAGAATCTGACTTCTTCACAAAAACTTGGGGAT...GACAGACTGGAGACCCAGGTCGTTCATCTGACCACGGGATGTGTTTCTGAAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR TCA 90 bp | AGGCAGCTACAGCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAACTGTGGGAGGTAGAGTaGAGGTATGACTTCAGTGTC | + |
Preference number: 4 (lower is better) Translates to: RQLQLCYSYVFFWIWSKELWEVE*RYDFSV Trigger: GACACTGAAGTCATACCTTCACTCTACCTCCCACAG...TTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGCTGTAGCTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR TCA 90 bp | TTCTTCAGAAACACATCCCGTGGTCAGATGAACGACCTGGGTCTCCAGTCTGTCGTCCTGGATTTATCATaGATATGTAAAAGAGTCCTG | + |
Preference number: 4 (lower is better) Translates to: FFRNTSRGQMNDLGLQSVVLDLS*ICKRVL Trigger: CAGGACTCTTTTACATATTCATGATAAATCCAGGAC...GACAGACTGGAGACCCAGGTCGTTCATCTGACCACGGGATGTGTTTCTGAAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | AGTCTTCAGATAGCTTACTCATCAACCTTGTATTTCTGGCCCCAACACAGCAGCCGTAGAGAGATCTGGTaGGCAATGTTTACTTCCACA | + |
Preference number: 4 (lower is better) Translates to: SLQIAYSSTLYFWPQHSSRREIW*AMFTST Trigger: TGTGGAAGTAAACATTGCTCACCAGATCTCTCTACG...GCTGCTGTGTTGGGGCCAGAAATACAAGGTTGATGAGTAAGCTATCTGAAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR TCA 90 bp | AACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGATTCTTGGTGTGAGACACCGTAGAGAGATCTGGTaGGCAATGTTTACTTCCACA | + |
Preference number: 4 (lower is better) Translates to: NHKIRHSDRLGKILGVRHRREIW*AMFTST Trigger: TGTGGAAGTAAACATTGCTCACCAGATCTCTCTACG...GTGTCTCACACCAAGAATCTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR TCA 90 bp | AGTCTTCAGATAGCTTACTCATCAACCTTGTATTTCTGGCCCCAACACAGCAGCAGTACATTCTGGTTCTaGTACCGAATCACTGCTGCA | + |
Preference number: 4 (lower is better) Translates to: SLQIAYSSTLYFWPQHSSSTFWF*YRITAA Trigger: TGCAGCAGTGATTCGGTATCAGAACCAGAATGTACT...GCTGCTGTGTTGGGGCCAGAAATACAAGGTTGATGAGTAAGCTATCTGAAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR TCA 90 bp | AGACACCTGATCACTTGCTCCTTACTCAGGGATGCACAGAATGGCTTTCTCTGTGGCAACTTCTTGAATTaGAGTACTTCAGCAGATCTG | + |
Preference number: 4 (lower is better) Translates to: RHLITCSLLRDAQNGFLCGNFLN*STSADL Trigger: CAGATCTGCTGAAGTACTTCAATTCAAGAAGTTGCC...ACAGAGAAAGCCATTCTGTGCATCCCTGAGTAAGGAGCAAGTGATCAGGTGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | TTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGAATGAAAAATGTTAGTCGGGCTTCAAAGTaGGCCCGGATCACGGGAATG | + |
Preference number: 4 (lower is better) Translates to: LDLVQRNLSLFPERMKNVSRASK*ARITGM Trigger: CATTCCCGTGATCCGGGCTCACTTTGAAGCCCGACT...AACATTTTTCATTCTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | GTACCATCATTAAATAAGGTGGGACACCATATGAATTTCATTGCACTGGAAGAAAGTCGGGCTTCAAAGTaGGCCCGGATCACGGGAATG | + |
Preference number: 4 (lower is better) Translates to: VPSLNKVGHHMNFIALEESRASK*ARITGM Trigger: CATTCCCGTGATCCGGGCTCACTTTGAAGCCCGACT...TTCTTCCAGTGCAATGAAATTCATATGGTGTCCCACCTTATTTAATGATGGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | CAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCAAAATCTTAGGTACTTaGTCCAGATCTGTCCTGGAT | + |
Preference number: 4 (lower is better) Translates to: QSLWVPGSVPNTPGIQIFKILGT*SRSVLD Trigger: ATCCAGGACAGATCTGGAGCAAGTACCTAAGATTTT...GAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | TATTTCATTGTACATTATAACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGGCCGGAAGCTGTGAATaGCCTGAAGCTCCTGCTGCA | + |
Preference number: 4 (lower is better) Translates to: YFIVHYNHKIRHSDRLGKAGSCE*PEAPAA Trigger: TGCAGCAGGAGCTTCAGGGCATTCACAGCTTCCGGC...CTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTTATAATGTACAATGAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR GCA 90 bp | TCACTTGCTCCTTACTCAGGGATGCACAGAATGGCTTTCTCTGTAGATCCCACTAAGATCCTGAAATTCTaGAGGAACATCAGCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: SLAPYSGMHRMAFSVDPTKILKF*RNISLL Trigger: AAGCAGGCTGATGTTCCTGCAGAATTTCAGGATCTT...AGTGGGATCTACAGAGAAAGCCATTCTGTGCATCCCTGAGTAAGGAGCAAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | TCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCAAGATCCTGAAATTCTaGAGGAACATCAGCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: SLWVPGSVPNTPGIQIFFKILKF*RNISLL Trigger: AAGCAGGCTGATGTTCCTGCAGAATTTCAGGATCTT...GAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | TCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCTTTAGTCCAACAACTTaGAAAGCACCAGCTCCAAGA | + |
Preference number: 4 (lower is better) Translates to: SLWVPGSVPNTPGIQIFFFSPTT*KAPAPR Trigger: TCTTGGAGCTGGTGCTTTGCAAGTTGTTGGACTAAA...GAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | CAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCGTAAAAAGCTACATCTaGTGTGACCAACCCATTTTG | + |
Preference number: 4 (lower is better) Translates to: QSLWVPGSVPNTPGIQIFVKSYI*CDQPIL Trigger: CAAAATGGGTTGGTCACAGCAGATGTAGCTTTTTAC...GAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | TTCTTCAGAAACACATCCCGTGGTCAGATGAACGACCTGGGTCTCCAGTCTGTCGACAGAACAACACTGTaGATAATATTCAATGTTGCC | + |
Preference number: 4 (lower is better) Translates to: FFRNTSRGQMNDLGLQSVDRTTL*IIFNVA Trigger: GGCAACATTGAATATTATCCACAGTGTTGTTCTGTC...GACAGACTGGAGACCCAGGTCGTTCATCTGACCACGGGATGTGTTTCTGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | TTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGAATGAAAAATGTTGCATGCTCCATTGCTTaGGGGGCAGTCGGGCTTCAA | + |
Preference number: 4 (lower is better) Translates to: LDLVQRNLSLFPERMKNVACSIA*GAVGLQ Trigger: TTGAAGCCCGACTGCCCCCCAAGCAATGGAGCATGC...AACATTTTTCATTCTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | GCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGTGGCTCAGCTTTTCCTaGAGCAACTTGGAAGAAGCT | + |
Preference number: 4 (lower is better) Translates to: AVLQLCVLLDLVQRNLSLWLSFS*SNLEEA Trigger: AGCTTCTTCCAAGTTGCTTCAGGAAAAGCTGAGCCA...CAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | GATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGAATGAAAAATGTTATATGGAGGAGCACACGCTaGTGTCTGCTCCTTGCTGGA | + |
Preference number: 4 (lower is better) Translates to: DLVQRNLSLFPERMKNVIWRSTR*CLLLAG Trigger: TCCAGCAAGGAGCAGACATCAGCGTGTGCTCCTCCA...TATAACATTTTTCATTCTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | GTTTCCAGAGAGAATGAAAAATGTTATAGACACCTGATCACTTGCTCCTTACTCTTATTTGCTTGGCTCTaGAGGGCCCCAAGCAGTGAC | + |
Preference number: 4 (lower is better) Translates to: VSRENEKCYRHLITCSLLLFAWL*RAPSSD Trigger: GTCACTGCTTGGGGCCCTTCAGAGCCAAGCAAATAA...GAGTAAGGAGCAAGTGATCAGGTGTCTATAACATTTTTCATTCTCTCTGGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | GCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGGTTCACAAACTTATTTaGTTGGCTCTGAAGGGCCCC | + |
Preference number: 4 (lower is better) Translates to: AMCSFGFGPKKPESVSREVHKLI*LALKGP Trigger: GGGGCCCTTCAGAGCCAAGCAAATAAGTTTGTGAAC...CTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | TTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGCAGGAACATCAGCCTaGTTCCAACGCTCGTTGTCT | + |
Preference number: 4 (lower is better) Translates to: LQLCVLLDLVQRNLSLFPAGTSA*FQRSLS Trigger: AGACAACGAGCGTTGGAAGCAGGCTGATGTTCCTGC...TGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | CAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCGAGTTTGGTGTACAGTaGCCATTAACTTCAGTTTAT | + |
Preference number: 4 (lower is better) Translates to: QSLWVPGSVPNTPGIQIFEFGVQ*PLTSVY Trigger: ATAAACTGAAGTTAATGGCCACTGTACACCAAACTC...GAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | TGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCAGAAACTTGACAGCTCGATCATaGCATACATCTGAAGCATTA | + |
Preference number: 4 (lower is better) Translates to: WVPGSVPNTPGIQIFFRNLTARS*HTSEAL Trigger: TAATGCTTCAGATGTATGCCATGATCGAGCTGTCAA...GTTTCTGAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | GCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGCCGACAACTGCATACTaGTGTCCCTCAACAACAAGA | + |
Preference number: 4 (lower is better) Translates to: AVLQLCVLLDLVQRNLSLPTTAY*CPSTTR Trigger: TCTTGTTGTTGAGGGACACCAGTATGCAGTTGTCGG...CAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | TCACTTGCTCCTTACTCAGGGATGCACAGAATGGCTTTCTCTGTAGATCCCACTGCTCCAAGAACTAACTaGCAACTTCTTGAATTGAAG | + |
Preference number: 4 (lower is better) Translates to: SLAPYSGMHRMAFSVDPTAPRTN*QLLELK Trigger: CTTCAATTCAAGAAGTTGCCAGTTAGTTCTTGGAGC...AGTGGGATCTACAGAGAAAGCCATTCTGTGCATCCCTGAGTAAGGAGCAAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | CACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCAGCTCCAAGAACTAACTaGCAACTTCTTGAATTGAAG | + |
Preference number: 4 (lower is better) Translates to: HFGSQVQFLTHQASRFSSAPRTN*QLLELK Trigger: CTTCAATTCAAGAAGTTGCCAGTTAGTTCTTGGAGC...TGAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | TATTTCATTGTACATTATAACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGACACACATCTGGCAGTaGCTGCACAGGTCGAATGTG | + |
Preference number: 4 (lower is better) Translates to: YFIVHYNHKIRHSDRLGKTHIWQ*LHRSNV Trigger: CACATTCGACCTGTGCAGTCACTGCCAGATGTGTGT...CTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTTATAATGTACAATGAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR TCA 90 bp | GTTTCCAGAGAGAATGAAAAATGTTATAGACACCTGATCACTTGCTCCTTACTCGGAGACGTGTTTCTTTaGGAGGTAGTATCAACCGCC | + |
Preference number: 4 (lower is better) Translates to: VSRENEKCYRHLITCSLLGDVFL*EVVSTA Trigger: GGCGGTTGATACTACCTCTCAAAGAAACACGTCTCC...GAGTAAGGAGCAAGTGATCAGGTGTCTATAACATTTTTCATTCTCTCTGGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | GTACCATCATTAAATAAGGTGGGACACCATATGAATTTCATTGCACTGGAAGAATTATTTGCTTGGCTCTaGAGGGCCCCAAGCAGTGAC | + |
Preference number: 4 (lower is better) Translates to: VPSLNKVGHHMNFIALEELFAWL*RAPSSD Trigger: GTCACTGCTTGGGGCCCTTCAGAGCCAAGCAAATAA...TTCTTCCAGTGCAATGAAATTCATATGGTGTCCCACCTTATTTAATGATGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | GCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGGCTTACAAATATTCCTaGAACACGGGGAAGGAACAG | + |
Preference number: 4 (lower is better) Translates to: AVLQLCVLLDLVQRNLSLAYKYS*NTGKEQ Trigger: CTGTTCCTTCCCCGTGTTTCAGGAATATTTGTAAGC...CAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | AGGCAGCTACAGCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAGTGACCAACCCATTTTaGGGTCCTCCGTCATTTATT | + |
Preference number: 4 (lower is better) Translates to: RQLQLCYSYVFFWIWSKEVTNPF*GPPSFI Trigger: AATAAATGACGGAGGACCTCAAAATGGGTTGGTCAC...TTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGCTGTAGCTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | GTACATTATAACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGATTCTTGGTAAGCTACATCTGCTGTaGCCAACCCATTTTGAGGTC | + |
Preference number: 4 (lower is better) Translates to: VHYNHKIRHSDRLGKILGKLHLL*PTHFEV Trigger: GACCTCAAAATGGGTTGGTCACAGCAGATGTAGCTT...ACCAAGAATCTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTTATAATGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR TCA 90 bp | GCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGACAGTCCATCTATGTTaGTCTGTAACTGTGGGTTCC | + |
Preference number: 4 (lower is better) Translates to: AVLQLCVLLDLVQRNLSLTVHLC*SVTVGS Trigger: GGAACCCACAGTTACAGATCAACATAGATGGACTGT...CAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109578.8 |
||
CDS-3UTR GCA 90 bp | AACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGATTCTTGGTGTGAGACACAAAATCTTAGGTACTTaGTCCAGATCTGTCCTGGAT | + |
Preference number: 4 (lower is better) Translates to: NHKIRHSDRLGKILGVRHKILGT*SRSVLD Trigger: ATCCAGGACAGATCTGGAGCAAGTACCTAAGATTTT...GTGTCTCACACCAAGAATCTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR CCA 90 bp | GCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGTATGTGAATCACCTGTaGGTTCCTTGGGACACACAT | + |
Preference number: 4 (lower is better) Translates to: AMCSFGFGPKKPESVSREYVNHL*VPWDTH Trigger: ATGTGTGTCCCAAGGAACCCACAGGTGATTCACATA...CTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006221.14 |
||
CDS-3UTR CCA 90 bp | GATTCTTGGTGTGAGACACAGGCACTTTCATTTGTAGAGTGCTGCCGATTCTGGGCTCCAGATCTGTCCTaGATTTATCATGAATATGTA | + |
Preference number: 4 (lower is better) Translates to: DSWCETQALSFVECCRFWAPDLS*IYHEYV Trigger: TACATATTCATGATAAATCCAGGACAGATCTGGAGC...CCAGAATCGGCAGCACTCTACAAATGAAAGTGCCTGTGTCTCACACCAAGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR CCA 90 bp | TCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCGCTCCAGATCTGTCCTaGATTTATCATGAATATGTA | + |
Preference number: 4 (lower is better) Translates to: SLWVPGSVPNTPGIQIFFAPDLS*IYHEYV Trigger: TACATATTCATGATAAATCCAGGACAGATCTGGAGC...GAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | GATTCTTGGTGTGAGACACAGGCACTTTCATTTGTAGAGTGCTGCCGATTCTGGGAGTTTGGTGTACAGTaGCCATTAACTTCAGTTTAT | + |
Preference number: 4 (lower is better) Translates to: DSWCETQALSFVECCRFWEFGVQ*PLTSVY Trigger: ATAAACTGAAGTTAATGGCCACTGTACACCAAACTC...CCAGAATCGGCAGCACTCTACAAATGAAAGTGCCTGTGTCTCACACCAAGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR CCA 90 bp | TTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGCAGGGCTCGCTATGTaGAGACGTGTTTCTTTGAGA | + |
Preference number: 4 (lower is better) Translates to: LQLCVLLDLVQRNLSLFPAGLAM*RRVSLR Trigger: TCTCAAAGAAACACGTCTCCACATAGCGAGCCCTGC...TGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | GCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGGCTTTTCTCAAGAACTaGCAGAACAACACTGTGGAT | + |
Preference number: 4 (lower is better) Translates to: AVLQLCVLLDLVQRNLSLAFLKN*QNNTVD Trigger: ATCCACAGTGTTGTTCTGTCAGTTCTTGAGAAAAGC...CAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | GCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGGGCAACTTCTTGAATTaGAGTACTTCAGCAGATCTG | + |
Preference number: 4 (lower is better) Translates to: AMCSFGFGPKKPESVSREGNFLN*STSADL Trigger: CAGATCTGCTGAAGTACTTCAATTCAAGAAGTTGCC...CTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | TCACTTGCTCCTTACTCAGGGATGCACAGAATGGCTTTCTCTGTAGATCCCACTGAGGACAAATATTCTTaGATCTCTCATGAATCTTCT | + |
Preference number: 4 (lower is better) Translates to: SLAPYSGMHRMAFSVDPTEDKYS*ISHESS Trigger: AGAAGATTCATGAGAGATGCAAGAATATTTGTCCTC...AGTGGGATCTACAGAGAAAGCCATTCTGTGCATCCCTGAGTAAGGAGCAAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | GTACCATCATTAAATAAGGTGGGACACCATATGAATTTCATTGCACTGGAAGAATTTCCTGAAGCAACTTaGAAGAAGCTGCGTCGCGAC | + |
Preference number: 4 (lower is better) Translates to: VPSLNKVGHHMNFIALEEFPEAT*KKLRRD Trigger: GTCGCGACGCAGCTTCTTCCAAGTTGCTTCAGGAAA...TTCTTCCAGTGCAATGAAATTCATATGGTGTCCCACCTTATTTAATGATGGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | GCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGTCCTCTTCTAAAACTTaGCATTCACCTTCCAGTGGT | + |
Preference number: 4 (lower is better) Translates to: AVLQLCVLLDLVQRNLSLSSSKT*HSPSSG Trigger: ACCACTGGAAGGTGAATGCCAAGTTTTAGAAGAGGA...CAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR TCA 90 bp | TTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGAATGAAAAATGTTTGGCTCAGCTTTTCCTaGAGCAACTTGGAAGAAGCT | + |
Preference number: 4 (lower is better) Translates to: LDLVQRNLSLFPERMKNVWLSFS*SNLEEA Trigger: AGCTTCTTCCAAGTTGCTTCAGGAAAAGCTGAGCCA...AACATTTTTCATTCTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | GATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGAATGAAAAATGTTATATTTCCTGAAGCAACTTaGAAGAAGCTGCGTCGCGAC | + |
Preference number: 4 (lower is better) Translates to: DLVQRNLSLFPERMKNVIFPEAT*KKLRRD Trigger: GTCGCGACGCAGCTTCTTCCAAGTTGCTTCAGGAAA...TATAACATTTTTCATTCTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | TATTTCATTGTACATTATAACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGTGCTGCAGAACCTCTTaGGTTGTTGCTATTAAGTCC | + |
Preference number: 4 (lower is better) Translates to: YFIVHYNHKIRHSDRLGKCCRTS*VVAIKS Trigger: GGACTTAATAGCAACAACTCAAGAGGTTCTGCAGCA...CTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTTATAATGTACAATGAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR GCA 90 bp | GTTTCCAGAGAGAATGAAAAATGTTATAGACACCTGATCACTTGCTCCTTACTCAAGATCCTGAAATTCTaGAGGAACATCAGCCTGCTT | + |
Preference number: 4 (lower is better) Translates to: VSRENEKCYRHLITCSLLKILKF*RNISLL Trigger: AAGCAGGCTGATGTTCCTGCAGAATTTCAGGATCTT...GAGTAAGGAGCAAGTGATCAGGTGTCTATAACATTTTTCATTCTCTCTGGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | TATTTCATTGTACATTATAACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGACAGTCCATCTATGTTaGTCTGTAACTAGAGATGGG | + |
Preference number: 4 (lower is better) Translates to: YFIVHYNHKIRHSDRLGKTVHLC*SVTRDG Trigger: CCCATCTCTAGTTACAGATCAACATAGATGGACTGT...CTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTTATAATGTACAATGAAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006221.14 |
||
CDS-3UTR TCA 90 bp | GTACCATCATTAAATAAGGTGGGACACCATATGAATTTCATTGCACTGGAAGAAGCTTTTCTCAAGAACTaGCAGAACAACACTGTGGAT | + |
Preference number: 4 (lower is better) Translates to: VPSLNKVGHHMNFIALEEAFLKN*QNNTVD Trigger: ATCCACAGTGTTGTTCTGTCAGTTCTTGAGAAAAGC...TTCTTCCAGTGCAATGAAATTCATATGGTGTCCCACCTTATTTAATGATGGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | GATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGAATGAAAAATGTTATAACCGTCCTTTGCTCTTaGCATGAGAAATTTGACAGC | + |
Preference number: 4 (lower is better) Translates to: DLVQRNLSLFPERMKNVITVLCS*HEKFDS Trigger: GCTGTCAAATTTCTCATGTCAAGAGCAAAGGACGGT...TATAACATTTTTCATTCTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | GATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGAATGAAAAATGTTATAACATCTGGCAGTGACTaGACAGGTCGAATGTGTTTT | + |
Preference number: 4 (lower is better) Translates to: DLVQRNLSLFPERMKNVITSGSD*TGRMCF Trigger: AAAACACATTCGACCTGTGCAGTCACTGCCAGATGT...TATAACATTTTTCATTCTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR GCA 90 bp | GTACATTATAACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGATTCTTGGTGATCTCCTGCTGATATaGTATAAAATTCTCCTTGCT | + |
Preference number: 4 (lower is better) Translates to: VHYNHKIRHSDRLGKILGDLLLI*YKILLA Trigger: AGCAAGGAGAATTTTATAGCATATCAGCAGGAGATC...ACCAAGAATCTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTTATAATGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR GCA 90 bp | TTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGAATGAAAAATGTTTTTAGTCCAACAACTTaGAAAGCACCAGCTCCAAGA | + |
Preference number: 4 (lower is better) Translates to: LDLVQRNLSLFPERMKNVFSPTT*KAPAPR Trigger: TCTTGGAGCTGGTGCTTTGCAAGTTGTTGGACTAAA...AACATTTTTCATTCTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | GTTTCCAGAGAGAATGAAAAATGTTATAGACACCTGATCACTTGCTCCTTACTCGTAAAAAGCTACATCTaGTGTGACCAACCCATTTTG | + |
Preference number: 4 (lower is better) Translates to: VSRENEKCYRHLITCSLLVKSYI*CDQPIL Trigger: CAAAATGGGTTGGTCACAGCAGATGTAGCTTTTTAC...GAGTAAGGAGCAAGTGATCAGGTGTCTATAACATTTTTCATTCTCTCTGGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | GTTTCCAGAGAGAATGAAAAATGTTATAGACACCTGATCACTTGCTCCTTACTCTTGACAGCTCGATCATaGCATACATCTGAAGCATTA | + |
Preference number: 4 (lower is better) Translates to: VSRENEKCYRHLITCSLLLTARS*HTSEAL Trigger: TAATGCTTCAGATGTATGCCATGATCGAGCTGTCAA...GAGTAAGGAGCAAGTGATCAGGTGTCTATAACATTTTTCATTCTCTCTGGAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR TCA 90 bp | GTTTCCAGAGAGAATGAAAAATGTTATAGACACCTGATCACTTGCTCCTTACTCATCCCCAAGTTTTTGTaGAGAAGTCAGATTCTCTTT | + |
Preference number: 4 (lower is better) Translates to: VSRENEKCYRHLITCSLLIPKFL*RSQILF Trigger: AAAGAGAATCTGACTTCTTCACAAAAACTTGGGGAT...GAGTAAGGAGCAAGTGATCAGGTGTCTATAACATTTTTCATTCTCTCTGGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR TCA 90 bp | GTTTCCAGAGAGAATGAAAAATGTTATAGACACCTGATCACTTGCTCCTTACTCGTCCTGGATTTATCATaGATATGTAAAAGAGTCCTG | + |
Preference number: 4 (lower is better) Translates to: VSRENEKCYRHLITCSLLVLDLS*ICKRVL Trigger: CAGGACTCTTTTACATATTCATGATAAATCCAGGAC...GAGTAAGGAGCAAGTGATCAGGTGTCTATAACATTTTTCATTCTCTCTGGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | GTTTCCAGAGAGAATGAAAAATGTTATAGACACCTGATCACTTGCTCCTTACTCGCTCCAGATCTGTCCTaGATTTATCATGAATATGTA | + |
Preference number: 4 (lower is better) Translates to: VSRENEKCYRHLITCSLLAPDLS*IYHEYV Trigger: TACATATTCATGATAAATCCAGGACAGATCTGGAGC...GAGTAAGGAGCAAGTGATCAGGTGTCTATAACATTTTTCATTCTCTCTGGAAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CCA 90 bp | GATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGAATGAAAAATGTTATATCCTCTTCTAAAACTTaGCATTCACCTTCCAGTGGT | + |
Preference number: 4 (lower is better) Translates to: DLVQRNLSLFPERMKNVISSSKT*HSPSSG Trigger: ACCACTGGAAGGTGAATGCCAAGTTTTAGAAGAGGA...TATAACATTTTTCATTCTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR TCA 90 bp | GTACCATCATTAAATAAGGTGGGACACCATATGAATTTCATTGCACTGGAAGAAGTCCTGGATTTATCATaGATATGTAAAAGAGTCCTG | + |
Preference number: 4 (lower is better) Translates to: VPSLNKVGHHMNFIALEEVLDLS*ICKRVL Trigger: CAGGACTCTTTTACATATTCATGATAAATCCAGGAC...TTCTTCCAGTGCAATGAAATTCATATGGTGTCCCACCTTATTTAATGATGGTAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR GCA 90 bp | TTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGAATGAAAAATGTTGATCTCCTGCTGATATaGTATAAAATTCTCCTTGCT | + |
Preference number: 4 (lower is better) Translates to: LDLVQRNLSLFPERMKNVDLLLI*YKILLA Trigger: AGCAAGGAGAATTTTATAGCATATCAGCAGGAGATC...AACATTTTTCATTCTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR CCA 90 bp | TATTTCATTGTACATTATAACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGGAGTTTGGTGTACAGTaGCCATTAACTTCAGTTTAT | + |
Preference number: 4 (lower is better) Translates to: YFIVHYNHKIRHSDRLGKEFGVQ*PLTSVY Trigger: ATAAACTGAAGTTAATGGCCACTGTACACCAAACTC...CTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTTATAATGTACAATGAAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR CCA 90 bp | TATTTCATTGTACATTATAACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGGACAGAACAACACTGTaGATAATATTCAATGTTGCC | + |
Preference number: 4 (lower is better) Translates to: YFIVHYNHKIRHSDRLGKDRTTL*IIFNVA Trigger: GGCAACATTGAATATTATCCACAGTGTTGTTCTGTC...CTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTTATAATGTACAATGAAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS TCA 90 bp | ACCGAATCACTGCTGCAGGGCTCGCTATGTGGAGACGTGTTTCTTTaGGAGGTAGTATCAACCGCCGCAGATGCTGGCTCACCCTCACTG | + |
Preference number: 5 (lower is better) Translates to: TESLLQGSLCGDVFL*EVVSTAADAGSPSL Trigger: CAGTGAGGGTGAGCCAGCATCTGCGGCGGTTGATACTACCTCTCAAAGAAACACGTCTCCACATAGCGAGCCCTGCAGCAGTGATTCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | CCACCTCAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGTGCTTCCAACGCTCGTaGTCTAAGAGGAGGCTGAGC | + |
Preference number: 5 (lower is better) Translates to: PPQSLWVPGSVPNTPGIQCFQRS*SKRRLS Trigger: GCTCAGCCTCCTCTTAGACAACGAGCGTTGGAAGCA...CTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTGAGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS CCA 90 bp | TGGAGACGTGTTTCTTTGAGAGGTAGTATCAACCGCCGCAGATGCTaGCTCACCCTCACTGAAAGCATCACTTATGAACCAGCCCTCGTG | + |
Preference number: 5 (lower is better) Translates to: WRRVSLRGSINRRRC*LTLTESITYEPALV Trigger: CACGAGGGCTGGTTCATAAGTGATGCTTTCAGTGAGGGTGAGCCAGCATCTGCGGCGGTTGATACTACCTCTCAAAGAAACACGTCTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | CTCAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTGCTTCCAACGCTCGTaGTCTAAGAGGAGGCTGAGC | + |
Preference number: 5 (lower is better) Translates to: LSHFGSQVQFLTHQASRFCFQRS*SKRRLS Trigger: GCTCAGCCTCCTCTTAGACAACGAGCGTTGGAAGCA...AAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | AGACACCTGATCACTTGCTCCTTACTCAGGGATGCACAGAATGGCTTTCTCTGTTCACCTGTGGGTTCCTaGGGACACACATCTGGCAGT | + |
Preference number: 5 (lower is better) Translates to: RHLITCSLLRDAQNGFLCSPVGS*GHTSGS Trigger: ACTGCCAGATGTGTGTCCCAAGGAACCCACAGGTGA...ACAGAGAAAGCCATTCTGTGCATCCCTGAGTAAGGAGCAAGTGATCAGGTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006221.14 |
||
CDS TCA 90 bp | CCTGTTCACAAACTTATTTGCTTGGCTCTGAAGGGCCCCAAGCAGTaGCGTGCTCTTCCTCCCACAGATCTGTTCAGTGTCCACTATGAA | + |
Preference number: 5 (lower is better) Translates to: PVHKLICLALKGPKQ*RALPPTDLFSVHYE Trigger: TTCATAGTGGACACTGAACAGATCTGTGGGAGGAAGAGCACGTCACTGCTTGGGGCCCTTCAGAGCCAAGCAAATAAGTTTGTGAACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | TTCTTCAGAAACACATCCCGTGGTCAGATGAACGACCTGGGTCTCCAGTCTGTCGCTGATGTCTGCTCCTaGCTGGATGAAGAATCAGTA | + |
Preference number: 5 (lower is better) Translates to: FFRNTSRGQMNDLGLQSVADVCS*LDEESV Trigger: TACTGATTCTTCATCCAGCAAGGAGCAGACATCAGC...GACAGACTGGAGACCCAGGTCGTTCATCTGACCACGGGATGTGTTTCTGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | ATCCCACTGAATCCAGTTCCCAACACTGATCCTTCTTTTCCCTTCCCCCACCTCTGTTCACAAACTTATTaGCTTGGCTCTGAAGGGCCC | + |
Preference number: 5 (lower is better) Translates to: IPLNPVPNTDPSFPFPHLCSQTY*LGSEGP Trigger: GGGCCCTTCAGAGCCAAGCAAATAAGTTTGTGAACA...GAGGTGGGGGAAGGGAAAAGAAGGATCAGTGTTGGGAACTGGATTCAGTGGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | CACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCAGTAACTGTGGGTTCCTaGGGACACACATCTGGCAGT | + |
Preference number: 5 (lower is better) Translates to: HFGSQVQFLTHQASRFSSVTVGS*GHTSGS Trigger: ACTGCCAGATGTGTGTCCCAAGGAACCCACAGTTAC...TGAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109578.8 |
||
CDS-3UTR CAA 90 bp | TTCTTCAGAAACACATCCCGTGGTCAGATGAACGACCTGGGTCTCCAGTCTGTCGCAGAACCTCTTGAGTaGTTGCTATTAAGTCCAACG | + |
Preference number: 5 (lower is better) Translates to: FFRNTSRGQMNDLGLQSVAEPLE*LLLSPT Trigger: CGTTGGACTTAATAGCAACAACTCAAGAGGTTCTGC...GACAGACTGGAGACCCAGGTCGTTCATCTGACCACGGGATGTGTTTCTGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | CAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCGTCCTGCAATTCGTGTaGAGAGGTCATTGCATGAAA | + |
Preference number: 5 (lower is better) Translates to: QSLWVPGSVPNTPGIQIFVLQFV*RGHCMK Trigger: TTTCATGCAATGACCTCTCAACACGAATTGCAGGAC...GAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | CTCAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTACTCCTGGATGTTACTaGCTAGTTTTCCTAGCTCCA | + |
Preference number: 5 (lower is better) Translates to: LSHFGSQVQFLTHQASRFTPGCY*LVFLAP Trigger: TGGAGCTAGGAAAACTAGCAAGTAACATCCAGGAGT...AAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | AGTCTTCAGATAGCTTACTCATCAACCTTGTATTTCTGGCCCCAACACAGCAGCCACAAACTTATTTGCTaGGCTCTGAAGGGCCCCAAG | + |
Preference number: 5 (lower is better) Translates to: SLQIAYSSTLYFWPQHSSHKLIC*ALKGPK Trigger: CTTGGGGCCCTTCAGAGCCAAGCAAATAAGTTTGTG...GCTGCTGTGTTGGGGCCAGAAATACAAGGTTGATGAGTAAGCTATCTGAAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS GCA 90 bp | ATCCAGATAATGGCTCAGCTTTTCCTGAAGCAACTTGGAAGAAGCTaGGTCGCGACTTCCTTTCCCACCAGCAGTATTAAAATGAGACCA | + |
Preference number: 5 (lower is better) Translates to: IQIMAQLFLKQLGRS*VATSFPTSSIKMRP Trigger: TGGTCTCATTTTAATACTGCTGGTGGGAAAGGAAGTCGCGACGCAGCTTCTTCCAAGTTGCTTCAGGAAAAGCTGAGCCATTATCTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | CAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCAAAAATCTTAGGTACTaGCTCCAGATCTGTCCTGGA | + |
Preference number: 5 (lower is better) Translates to: QSLWVPGSVPNTPGIQIFKNLRY*LQICPG Trigger: TCCAGGACAGATCTGGAGCAAGTACCTAAGATTTTT...GAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | AGACACCTGATCACTTGCTCCTTACTCAGGGATGCACAGAATGGCTTTCTCTGTGAACCTCTTGAGTTGTaGCTATTAAGTCCAACGCTC | + |
Preference number: 5 (lower is better) Translates to: RHLITCSLLRDAQNGFLCEPLEL*LLSPTL Trigger: GAGCGTTGGACTTAATAGCAACAACTCAAGAGGTTC...ACAGAGAAAGCCATTCTGTGCATCCCTGAGTAAGGAGCAAGTGATCAGGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | TGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCAGAAACACTCCTGGATGTTACTaGCTAGTTTTCCTAGCTCCA | + |
Preference number: 5 (lower is better) Translates to: WVPGSVPNTPGIQIFFRNTPGCY*LVFLAP Trigger: TGGAGCTAGGAAAACTAGCAAGTAACATCCAGGAGT...GTTTCTGAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | GGCATCCAGATTTTCTTCAGAAACACATCCCGTGGTCAGATGAACGACCTGGGTCTTGACATGAGAAATTaGACAGCTCGATCATGGCAT | + |
Preference number: 5 (lower is better) Translates to: GIQIFFRNTSRGQMNDLGLDMRN*TARSWH Trigger: ATGCCATGATCGAGCTGTCAAATTTCTCATGTCAAG...ACCCAGGTCGTTCATCTGACCACGGGATGTGTTTCTGAAGAAAATCTGGATGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | GATTCTTGGTGTGAGACACAGGCACTTTCATTTGTAGAGTGCTGCCGATTCTGGTGTGACCAACCCATTTaGAGGTCCTCCGTCATTTAT | + |
Preference number: 5 (lower is better) Translates to: DSWCETQALSFVECCRFWCDQPI*RSSVIY Trigger: ATAAATGACGGAGGACCTCAAAATGGGTTGGTCACA...CCAGAATCGGCAGCACTCTACAAATGAAAGTGCCTGTGTCTCACACCAAGAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR CAA 90 bp | TCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTTCTGTGACCAACCCATTTaGAGGTCCTCCGTCATTTAT | + |
Preference number: 5 (lower is better) Translates to: SLWVPGSVPNTPGIQIFFCDQPI*RSSVIY Trigger: ATAAATGACGGAGGACCTCAAAATGGGTTGGTCACA...GAAGAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS GCA 90 bp | CTGACTATAATCTCTATACCTCCTGGAGGAGCACACGCTGATGTCTaGTCCTTGCTGGATGAAGAATCAGTAGTACATTCTGGTTCTGAT | + |
Preference number: 5 (lower is better) Translates to: LTIISIPPGGAHADV*SLLDEESVVHSGSD Trigger: ATCAGAACCAGAATGTACTACTGATTCTTCATCCAGCAAGGAGCAGACATCAGCGTGTGCTCCTCCAGGAGGTATAGAGATTATAGTCAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS CCA 90 bp | CGAGTGAGCATGTCAGTAGTGACGGAGGGGATGTTATCCACACACTaGCAATATTCAAGAATGATTCTTATTAACAGCAAGACGGTTCCG | + |
Preference number: 5 (lower is better) Translates to: RVSMSVVTEGMLSTH*QYSRMILINSKTVP Trigger: CGGAACCGTCTTGCTGTTAATAAGAATCATTCTTGAATATTGCCAGTGTGTGGATAACATCCCCTCCGTCACTACTGACATGCTCACTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | AGACACCTGATCACTTGCTCCTTACTCAGGGATGCACAGAATGGCTTTCTCTGTAAAAATCTTAGGTACTaGCTCCAGATCTGTCCTGGA | + |
Preference number: 5 (lower is better) Translates to: RHLITCSLLRDAQNGFLCKNLRY*LQICPG Trigger: TCCAGGACAGATCTGGAGCAAGTACCTAAGATTTTT...ACAGAGAAAGCCATTCTGTGCATCCCTGAGTAAGGAGCAAGTGATCAGGTGTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | GCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGCACAAACTTATTTGCTaGGCTCTGAAGGGCCCCAAG | + |
Preference number: 5 (lower is better) Translates to: AMCSFGFGPKKPESVSREHKLIC*ALKGPK Trigger: CTTGGGGCCCTTCAGAGCCAAGCAAATAAGTTTGTG...CTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | TTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCATGCTTCCAACGCTCGTaGTCTAAGAGGAGGCTGAGC | + |
Preference number: 5 (lower is better) Translates to: LQLCVLLDLVQRNLSLFPCFQRS*SKRRLS Trigger: GCTCAGCCTCCTCTTAGACAACGAGCGTTGGAAGCA...TGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | CAGTCACTTTGGGTCCCAGGTTCAGTTCCTAACACACCAGGCATCCAGATTTTCTGGCAACTTCTTGAATaGAAGTACTTCAGCAGATCT | + |
Preference number: 5 (lower is better) Translates to: QSLWVPGSVPNTPGIQIFWQLLE*KYFSRS Trigger: AGATCTGCTGAAGTACTTCAATTCAAGAAGTTGCCA...GAAAATCTGGATGCCTGGTGTGTTAGGAACTGAACCTGGGACCCAAAGTGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | GCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGTGTTCACAAACTTATTaGCTTGGCTCTGAAGGGCCC | + |
Preference number: 5 (lower is better) Translates to: AMCSFGFGPKKPESVSRECSQTY*LGSEGP Trigger: GGGCCCTTCAGAGCCAAGCAAATAAGTTTGTGAACA...CTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | GCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGGAACCTCTTGAGTTGTaGCTATTAAGTCCAACGCTC | + |
Preference number: 5 (lower is better) Translates to: AVLQLCVLLDLVQRNLSLEPLEL*LLSPTL Trigger: GAGCGTTGGACTTAATAGCAACAACTCAAGAGGTTC...CAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | GCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGGCAGAACCTCTTGAGTaGTTGCTATTAAGTCCAACG | + |
Preference number: 5 (lower is better) Translates to: AVLQLCVLLDLVQRNLSLAEPLE*LLLSPT Trigger: CGTTGGACTTAATAGCAACAACTCAAGAGGTTCTGC...CAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | AGGCAGCTACAGCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACTCCTGGATGTTACTaGCTAGTTTTCCTAGCTCCA | + |
Preference number: 5 (lower is better) Translates to: RQLQLCYSYVFFWIWSKETPGCY*LVFLAP Trigger: TGGAGCTAGGAAAACTAGCAAGTAACATCCAGGAGT...TTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGCTGTAGCTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | TTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCACACAAACTTATTTGCTaGGCTCTGAAGGGCCCCAAG | + |
Preference number: 5 (lower is better) Translates to: LQLCVLLDLVQRNLSLFPHKLIC*ALKGPK Trigger: CTTGGGGCCCTTCAGAGCCAAGCAAATAAGTTTGTG...TGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | AGGCAGCTACAGCTGTGTTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAATGTGACCAACCCATTTaGAGGTCCTCCGTCATTTAT | + |
Preference number: 5 (lower is better) Translates to: RQLQLCYSYVFFWIWSKECDQPI*RSSVIY Trigger: ATAAATGACGGAGGACCTCAAAATGGGTTGGTCACA...TTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAACACAGCTGTAGCTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | GCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGCACAGTCCATCTATGTaGATCTGTAACTGTGGGTTC | + |
Preference number: 5 (lower is better) Translates to: AMCSFGFGPKKPESVSREHSPSM*ICNCGF Trigger: GAACCCACAGTTACAGATCAACATAGATGGACTGTG...CTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109578.8 |
||
CDS TCA 90 bp | CTGATATGCTATAAAATTCTCCTTGCTGATCTGTGGGAGGTAGAGTaGAGGTATGACTTCAGTGTCCACAAAGTCCAATCCCCAAGTTTT | + |
Preference number: 5 (lower is better) Translates to: LICYKILLADLWEVE*RYDFSVHKVQSPSF Trigger: AAAACTTGGGGATTGGACTTTGTGGACACTGAAGTCATACCTTCACTCTACCTCCCACAGATCAGCAAGGAGAATTTTATAGCATATCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR CAA 90 bp | GTACATTATAACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGATTCTTGGTGAACCTCTTGAGTTGTaGCTATTAAGTCCAACGCTC | + |
Preference number: 5 (lower is better) Translates to: VHYNHKIRHSDRLGKILGEPLEL*LLSPTL Trigger: GAGCGTTGGACTTAATAGCAACAACTCAAGAGGTTC...ACCAAGAATCTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTTATAATGTAC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS CCA 90 bp | AAACCGTCCTTTGCTCTTGACATGAGAAATTTGACAGCTCGATCATaGCATACATCTGAAGCATTACACAGTAACTCCTGGATGTTACTT | + |
Preference number: 5 (lower is better) Translates to: KPSFALDMRNLTARS*HTSEALHSNSWMLL Trigger: AAGTAACATCCAGGAGTTACTGTGTAATGCTTCAGATGTATGCCATGATCGAGCTGTCAAATTTCTCATGTCAAGAGCAAAGGACGGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | TATTTCATTGTACATTATAACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGTGTTCACAAACTTATTaGCTTGGCTCTGAAGGGCCC | + |
Preference number: 5 (lower is better) Translates to: YFIVHYNHKIRHSDRLGKCSQTY*LGSEGP Trigger: GGGCCCTTCAGAGCCAAGCAAATAAGTTTGTGAACA...CTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTTATAATGTACAATGAAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS TCA 90 bp | GCTCCAACAAATTCAGAAGTAGATAACAACACCTGCACTGTAGGCTaGGTTTGGTGTACAGTGGCCATTAACTTCAGTTTATTGTATACT | + |
Preference number: 5 (lower is better) Translates to: APTNSEVDNNTCTVG*VWCTVAINFSLLYT Trigger: AGTATACAATAAACTGAAGTTAATGGCCACTGTACACCAAACTCAGCCTACAGTGCAGGTGTTGTTATCTACTTCTGAATTTGTTGGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | TTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGAATGAAAAATGTTGCAGAACCTCTTGAGTaGTTGCTATTAAGTCCAACG | + |
Preference number: 5 (lower is better) Translates to: LDLVQRNLSLFPERMKNVAEPLE*LLLSPT Trigger: CGTTGGACTTAATAGCAACAACTCAAGAGGTTCTGC...AACATTTTTCATTCTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | GTACATTATAACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGATTCTTGGTTGGCAACTTCTTGAATaGAAGTACTTCAGCAGATCT | + |
Preference number: 5 (lower is better) Translates to: VHYNHKIRHSDRLGKILGWQLLE*KYFSRS Trigger: AGATCTGCTGAAGTACTTCAATTCAAGAAGTTGCCA...ACCAAGAATCTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTTATAATGTAC 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR CAA 90 bp | TTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCAGAGAGAATGAAAAATGTTAAAAATCTTAGGTACTaGCTCCAGATCTGTCCTGGA | + |
Preference number: 5 (lower is better) Translates to: LDLVQRNLSLFPERMKNVKNLRY*LQICPG Trigger: TCCAGGACAGATCTGGAGCAAGTACCTAAGATTTTT...AACATTTTTCATTCTCTCTGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | TATTTCATTGTACATTATAACCACAAGATTAGGCACTCTGACAGGTTAGGCAAGCTTGACATGAGAAATTaGACAGCTCGATCATGGCAT | + |
Preference number: 5 (lower is better) Translates to: YFIVHYNHKIRHSDRLGKLDMRN*TARSWH Trigger: ATGCCATGATCGAGCTGTCAAATTTCTCATGTCAAG...CTTGCCTAACCTGTCAGAGTGCCTAATCTTGTGGTTATAATGTACAATGAAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 |
||
CDS-3UTR CAA 90 bp | GTACCATCATTAAATAAGGTGGGACACCATATGAATTTCATTGCACTGGAAGAACTTGACATGAGAAATTaGACAGCTCGATCATGGCAT | + |
Preference number: 5 (lower is better) Translates to: VPSLNKVGHHMNFIALEELDMRN*TARSWH Trigger: ATGCCATGATCGAGCTGTCAAATTTCTCATGTCAAG...TTCTTCCAGTGCAATGAAATTCATATGGTGTCCCACCTTATTTAATGATGGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS-3UTR CAA 90 bp | TTACAGCTATGTGTTCTTTTGGATTTGGTCCAAAGAAACCTGAGTCTGTTTCCATGGCAACTTCTTGAATaGAAGTACTTCAGCAGATCT | + |
Preference number: 5 (lower is better) Translates to: LQLCVLLDLVQRNLSLFPWQLLE*KYFSRS Trigger: AGATCTGCTGAAGTACTTCAATTCAAGAAGTTGCCA...TGGAAACAGACTCAGGTTTCTTTGGACCAAATCCAAAAGAACACATAGCTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS TCA 72 bp | CTGCTGCAGGGCTCGCTATGTGGAGACGTGTTTCTTTaGGAGGTAGTATCAACCGCCGCAGATGCTGGCTCA | + |
Preference number: 6 (lower is better) Translates to: LLQGSLCGDVFL*EVVSTAADAGS Trigger: TGAGCCAGCATCTGCGGCGGTTGATACTACCTCTCAAAGAAACACGTCTCCACATAGCGAGCCCTGCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS CAA 72 bp | ACTGCTGCAGGGCTCGCTATGTGGAGACGTGTTTCTTaGAGAGGTAGTATCAACCGCCGCAGATGCTGGCTC | + |
Preference number: 6 (lower is better) Translates to: TAAGLAMWRRVS*RGSINRRRCWL Trigger: GAGCCAGCATCTGCGGCGGTTGATACTACCTCTCAAAGAAACACGTCTCCACATAGCGAGCCCTGCAGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS CAA 90 bp | TACCGAATCACTGCTGCAGGGCTCGCTATGTGGAGACGTGTTTCTTaGAGAGGTAGTATCAACCGCCGCAGATGCTGGCTCACCCTCACT | + |
Preference number: 6 (lower is better) Translates to: YRITAAGLAMWRRVS*RGSINRRRCWLTLT Trigger: AGTGAGGGTGAGCCAGCATCTGCGGCGGTTGATACTACCTCTCAAAGAAACACGTCTCCACATAGCGAGCCCTGCAGCAGTGATTCGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS TCA 72 bp | CAGCCTGCTTCCAACGCTCGTTGTCTAAGAGGAGGCTaGGCTTGGTCCGCCTCTCTTCATGAAACCTGTTCA | + |
Preference number: 6 (lower is better) Translates to: QPASNARCLRGG*AWSASLHETCS Trigger: TGAACAGGTTTCATGAAGAGAGGCGGACCAAGCTCAGCCTCCTCTTAGACAACGAGCGTTGGAAGCAGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS GCA 72 bp | TCTGTGTCCAAGGAGCTGTCCTTCCCAGCGCTCCTCTaGTGTGGGATCTCTTCCAATTCTCTAGTCCTTTGG | + |
Preference number: 6 (lower is better) Translates to: SVSKELSFPALL*CGISSNSLVLW Trigger: CCAAAGGACTAGAGAATTGGAAGAGATCCCACAGCAGAGGAGCGCTGGGAAGGACAGCTCCTTGGACACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS CAA 72 bp | AATTCTGCAGGAACATCAGCCTGCTTCCAACGCTCGTaGTCTAAGAGGAGGCTGAGCTTGGTCCGCCTCTCT | + |
Preference number: 6 (lower is better) Translates to: NSAGTSACFQRS*SKRRLSLVRLS Trigger: AGAGAGGCGGACCAAGCTCAGCCTCCTCTTAGACAACGAGCGTTGGAAGCAGGCTGATGTTCCTGCAGAATT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS GCA 72 bp | CACAAAGCTGTGATCCCAAATGCCGGAAGCTGTGAATaGCCTGAAGCTCCTGCTGCAGAACCTCTTGAGTTG | + |
Preference number: 6 (lower is better) Translates to: HKAVIPNAGSCE*PEAPAAEPLEL Trigger: CAACTCAAGAGGTTCTGCAGCAGGAGCTTCAGGGCATTCACAGCTTCCGGCATTTGGGATCACAGCTTTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS GCA 72 bp | TATTTGCTTGGCTCTGAAGGGCCCCAAGCAGTGACGTaGTCTTCCTCCCACAGATCTGTTCAGTGTCCACTA | + |
Preference number: 6 (lower is better) Translates to: YLLGSEGPQAVT*SSSHRSVQCPL Trigger: TAGTGGACACTGAACAGATCTGTGGGAGGAAGAGCACGTCACTGCTTGGGGCCCTTCAGAGCCAAGCAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS GCA 72 bp | CCTGTGGGTTCCTTGGGACACACATCTGGCAGTGACTaGACAGGTCGAATGTGTTTTGTTGGATCTACCTCT | + |
Preference number: 6 (lower is better) Translates to: PVGSLGHTSGSD*TGRMCFVGSTS Trigger: AGAGGTAGATCCAACAAAACACATTCGACCTGTGCAGTCACTGCCAGATGTGTGTCCCAAGGAACCCACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006221.14 |
||
CDS CAA 72 bp | TCCGCCTCTCTTCATGAAACCTGTTCACAAACTTATTaGCTTGGCTCTGAAGGGCCCCAAGCAGTGACGTGC | + |
Preference number: 6 (lower is better) Translates to: SASLHETCSQTY*LGSEGPQAVTC Trigger: GCACGTCACTGCTTGGGGCCCTTCAGAGCCAAGCAAATAAGTTTGTGAACAGGTTTCATGAAGAGAGGCGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS TCA 72 bp | ATCACCTGTGGGTTCCTTGGGACACACATCTGGCAGTaGCTGCACAGGTCGAATGTGTTTTGTTGGATCTAC | + |
Preference number: 6 (lower is better) Translates to: ITCGFLGTHIWQ*LHRSNVFCWIY Trigger: GTAGATCCAACAAAACACATTCGACCTGTGCAGTCACTGCCAGATGTGTGTCCCAAGGAACCCACAGGTGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006221.14 |
||
CDS GCA 72 bp | ACTGTGGGTTCCTTGGGACACACATCTGGCAGTGACTaGACAGGTCGAATGTGTTTTGTTGGATCTACCTCT | + |
Preference number: 6 (lower is better) Translates to: TVGSLGHTSGSD*TGRMCFVGSTS Trigger: AGAGGTAGATCCAACAAAACACATTCGACCTGTGCAGTCACTGCCAGATGTGTGTCCCAAGGAACCCACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109578.8 |
||
CDS TCA 72 bp | TGTAACTGTGGGTTCCTTGGGACACACATCTGGCAGTaGCTGCACAGGTCGAATGTGTTTTGTTGGATCTAC | + |
Preference number: 6 (lower is better) Translates to: CNCGFLGTHIWQ*LHRSNVFCWIY Trigger: GTAGATCCAACAAAACACATTCGACCTGTGCAGTCACTGCCAGATGTGTGTCCCAAGGAACCCACAGTTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000109578.8 |
||
CDS GCA 72 bp | ATGGCTCAGCTTTTCCTGAAGCAACTTGGAAGAAGCTaGGTCGCGACTTCCTTTCCCACCAGCAGTATTAAA | + |
Preference number: 6 (lower is better) Translates to: MAQLFLKQLGRS*VATSFPTSSIK Trigger: TTTAATACTGCTGGTGGGAAAGGAAGTCGCGACGCAGCTTCTTCCAAGTTGCTTCAGGAAAAGCTGAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS CCA 72 bp | GTTTCTTTGAGAGGTAGTATCAACCGCCGCAGATGCTaGCTCACCCTCACTGAAAGCATCACTTATGAACCA | + |
Preference number: 6 (lower is better) Translates to: VSLRGSINRRRC*LTLTESITYEP Trigger: TGGTTCATAAGTGATGCTTTCAGTGAGGGTGAGCCAGCATCTGCGGCGGTTGATACTACCTCTCAAAGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS CAA 72 bp | GCACCAGCTCCAAGAACTAACTGGCAACTTCTTGAATaGAAGTACTTCAGCAGATCTGTCAGGCGAGTGAGC | + |
Preference number: 6 (lower is better) Translates to: APAPRTNWQLLE*KYFSRSVRRVS Trigger: GCTCACTCGCCTGACAGATCTGCTGAAGTACTTCAATTCAAGAAGTTGCCAGTTAGTTCTTGGAGCTGGTGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS GCA 72 bp | ATCTCTATACCTCCTGGAGGAGCACACGCTGATGTCTaGTCCTTGCTGGATGAAGAATCAGTAGTACATTCT | + |
Preference number: 6 (lower is better) Translates to: ISIPPGGAHADV*SLLDEESVVHS Trigger: AGAATGTACTACTGATTCTTCATCCAGCAAGGAGCAGACATCAGCGTGTGCTCCTCCAGGAGGTATAGAGAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS CCA 72 bp | CTTATTAACAGCAAGACGGTTCCGACAACTGCATACTaGTGTCCCTCAACAACAAGAACATCAGCTGGCTTC | + |
Preference number: 6 (lower is better) Translates to: LINSKTVPTTAY*CPSTTRTSAGF Trigger: GAAGCCAGCTGATGTTCTTGTTGTTGAGGGACACCAGTATGCAGTTGTCGGAACCGTCTTGCTGTTAATAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS CAA 72 bp | TGCCCTGAAGCTCCTGCTGCAGAACCTCTTGAGTTGTaGCTATTAAGTCCAACGCTCCAACAAATTCAGAAG | + |
Preference number: 6 (lower is better) Translates to: CPEAPAAEPLEL*LLSPTLQQIQK Trigger: CTTCTGAATTTGTTGGAGCGTTGGACTTAATAGCAACAACTCAAGAGGTTCTGCAGCAGGAGCTTCAGGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS CAA 72 bp | GAATGCCCTGAAGCTCCTGCTGCAGAACCTCTTGAGTaGTTGCTATTAAGTCCAACGCTCCAACAAATTCAG | + |
Preference number: 6 (lower is better) Translates to: ECPEAPAAEPLE*LLLSPTLQQIQ Trigger: CTGAATTTGTTGGAGCGTTGGACTTAATAGCAACAACTCAAGAGGTTCTGCAGCAGGAGCTTCAGGGCATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS TCA 72 bp | AATTCAGAAGTAGATAACAACACCTGCACTGTAGGCTaGGTTTGGTGTACAGTGGCCATTAACTTCAGTTTA | + |
Preference number: 6 (lower is better) Translates to: NSEVDNNTCTVG*VWCTVAINFSL Trigger: TAAACTGAAGTTAATGGCCACTGTACACCAAACTCAGCCTACAGTGCAGGTGTTGTTATCTACTTCTGAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS CAA 72 bp | TCAAGAAAACCGTCCTTTGCTCTTGACATGAGAAATTaGACAGCTCGATCATGGCATACATCTGAAGCATTA | + |
Preference number: 6 (lower is better) Translates to: SRKPSFALDMRN*TARSWHTSEAL Trigger: TAATGCTTCAGATGTATGCCATGATCGAGCTGTCAAATTTCTCATGTCAAGAGCAAAGGACGGTTTTCTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS CAA 72 bp | CAGATCAATCCACTGGGGAAAATTCAACATTCTCATTaGATCTGCAAGCTTTACAACAACGTCTGTGTCTAT | + |
Preference number: 6 (lower is better) Translates to: QINPLGKIQHSH*ICKLYNNVCVY Trigger: ATAGACACAGACGTTGTTGTAAAGCTTGCAGATCAAATGAGAATGTTGAATTTTCCCCAGTGGATTGATCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS CAA 90 bp | TTCAATTTTTCAAGAAAACCGTCCTTTGCTCTTGACATGAGAAATTaGACAGCTCGATCATGGCATACATCTGAAGCATTACACAGTAAC | + |
Preference number: 6 (lower is better) Translates to: FNFSRKPSFALDMRN*TARSWHTSEALHSN Trigger: GTTACTGTGTAATGCTTCAGATGTATGCCATGATCGAGCTGTCAAATTTCTCATGTCAAGAGCAAAGGACGGTTTTCTTGAAAAATTGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |
||
CDS TCA 72 bp | AGATCAATCCACTGGGGAAAATTCAACATTCTCATTTaGTCTGCAAGCTTTACAACAACGTCTGTGTCTATT | + |
Preference number: 6 (lower is better) Translates to: RSIHWGKFNILI*SASFTTTSVSI Trigger: AATAGACACAGACGTTGTTGTAAAGCTTGCAGATCAAATGAGAATGTTGAATTTTCCCCAGTGGATTGATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000006221.14 ENSMUST00000109578.8 ENSMUST00000132017.2 |