Pregenerated sensors for VPS52 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024319Ensembl transcript IDs: ENSMUST00000025178.17, ENSMUST00000173196.3, ENSMUST00000234201.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CACAGATCAGCTACAGGGTGGCCTGCAGTGCTCTGCCCTAAGAGCTaGGGGTCAGTCAGAGCCTGGGGCGGTGGAAGCTCACAGGCTGTG | + |
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Preference number: 1 (lower is better) Translates to: HRSATGWPAVLCPKS*GSVRAWGGGSSQAV Trigger: CACAGCCTGTGAGCTTCCACCGCCCCAGGCTCTGACTGACCCTCAGCTCTTAGGGCAGAGCACTGCAGGCCACCCTGTAGCTGATCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR TCA 90 bp | GCTGAGGGTCAGTCAGAGCCTGGGGCGGTGGAAGCTCACAGGCTGTaGGTGAACAGCAGAGGAGCTGACCGGACTGGAAATGAAGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: AEGQSEPGAVEAHRL*VNSRGADRTGNEGH Trigger: GTGACCTTCATTTCCAGTCCGGTCAGCTCCTCTGCTGTTCACTCACAGCCTGTGAGCTTCCACCGCCCCAGGCTCTGACTGACCCTCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR TCA 90 bp | AGGGTCAGTCAGAGCCTGGGGCGGTGGAAGCTCACAGGCTGTGAGTaGACAGCAGAGGAGCTGACCGGACTGGAAATGAAGGTCACCTCA | + |
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Preference number: 1 (lower is better) Translates to: RVSQSLGRWKLTGCE*TAEELTGLEMKVTS Trigger: TGAGGTGACCTTCATTTCCAGTCCGGTCAGCTCCTCTGCTGTTCACTCACAGCCTGTGAGCTTCCACCGCCCCAGGCTCTGACTGACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR GCA 90 bp | GGTATCCCTCAGGACAGCACCCAAAGCTACCACATTCCCAGGCCTTaGGACAAGTGCCACCCTCCTGGAGAGCTACAAACAGTCCCCTCC | + |
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Preference number: 1 (lower is better) Translates to: GIPQDSTQSYHIPRP*DKCHPPGELQTVPS Trigger: GGAGGGGACTGTTTGTAGCTCTCCAGGAGGGTGGCACTTGTCGCAAGGCCTGGGAATGTGGTAGCTTTGGGTGCTGTCCTGAGGGATACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR TCA 90 bp | TCACCTCACTCAGAAACCCAGGGAGTGGCCTTGAACGCACTCTGTTaGGGCAGAGTCCTGGCAATGGAGGCTGAGAGGGGAGTGTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: SPHSETQGVALNALC*GRVLAMEAERGVWK Trigger: CTTCCACACTCCCCTCTCAGCCTCCATTGCCAGGACTCTGCCTCAACAGAGTGCGTTCAAGGCCACTCCCTGGGTTTCTGAGTGAGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR TCA 90 bp | TCCTGCAGGGTTCGGATCTCAGAGCTGATGGAGCTGAGATCGCTCTaGAAAGCTCCCAGCATCTGTTCCATGCGCTCCAGGACGGCGTCA | + |
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Preference number: 1 (lower is better) Translates to: SCRVRISELMELRSL*KAPSICSMRSRTAS Trigger: TGACGCCGTCCTGGAGCGCATGGAACAGATGCTGGGAGCTTTTCAGAGCGATCTCAGCTCCATCAGCTCTGAGATCCGAACCCTGCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234201.2 |
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| 3UTR GCA 90 bp | AGGATCTGTTTTGGAGCCAGGTCCACCCCTGCCTTGATGCATGGCTaGAGGTGTTATAGGCCCTCCATCCTCAAAGGAGCTGTAACAGCC | + |
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Preference number: 1 (lower is better) Translates to: RICFGARSTPALMHG*RCYRPSILKGAVTA Trigger: GGCTGTTACAGCTCCTTTGAGGATGGAGGGCCTATAACACCTGCAGCCATGCATCAAGGCAGGGGTGGACCTGGCTCCAAAACAGATCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR TCA 90 bp | AGGTTGAGAACCACTGCTCTGGAGTCTGCAAACTCCTTACAGAGGTaGGGCAGAGGGCAGCGGGAAGGGTCTGGGTCACATGAAAATGAC | + |
|
Preference number: 1 (lower is better) Translates to: RLRTTALESANSLQR*GRGQREGSGSHEND Trigger: GTCATTTTCATGTGACCCAGACCCTTCCCGCTGCCCTCTGCCTCACCTCTGTAAGGAGTTTGCAGACTCCAGAGCAGTGGTTCTCAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR TCA 90 bp | CTCCCAGCATCTGTTCCATGCGCTCCAGGACGGCGTCACAGGCCGTaGTCTGATTGTGCAGAGACGCTATGTTTTCACTCTCTTGGATAT | + |
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Preference number: 1 (lower is better) Translates to: LPASVPCAPGRRHRP*SDCAETLCFHSLGY Trigger: ATATCCAAGAGAGTGAAAACATAGCGTCTCTGCACAATCAGATCACGGCCTGTGACGCCGTCCTGGAGCGCATGGAACAGATGCTGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234201.2 |
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| 3UTR CCA 90 bp | AGCTGTAACAGCCACTTAGTGGCTGACACAATCTCAGAGGCTGTGTaGACTATTCCCATGGTATCCCTCAGGACAGCACCCAAAGCTACC | + |
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Preference number: 1 (lower is better) Translates to: SCNSHLVADTISEAV*TIPMVSLRTAPKAT Trigger: GGTAGCTTTGGGTGCTGTCCTGAGGGATACCATGGGAATAGTCCACACAGCCTCTGAGATTGTGTCAGCCACTAAGTGGCTGTTACAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR-3UTR CCA 90 bp | GGCCTGCAGTGCTCTGCCCTAAGAGCTGAGGGTCAGTCAGAGCCTGGGGCGGTGGCAGAGTCCTGGCAATaGAGGCTGAGAGGGGAGTGT | + |
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Preference number: 2 (lower is better) Translates to: GLQCSALRAEGQSEPGAVAESWQ*RLRGEC Trigger: ACACTCCCCTCTCAGCCTCCATTGCCAGGACTCTGC...CACCGCCCCAGGCTCTGACTGACCCTCAGCTCTTAGGGCAGAGCACTGCAGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR-3UTR GCA 90 bp | GGAGCCAGGTCCACCCCTGCCTTGATGCATGGCTGCAGGTGTTATAGGCCCTCCCCTCCTGAGCATCTATaGCACCCCTGGGCCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: GARSTPALMHGCRCYRPSPPEHL*HPWARS Trigger: GCTTCTGGCCCAGGGGTGGCATAGATGCTCAGGAGG...GGAGGGCCTATAACACCTGCAGCCATGCATCAAGGCAGGGGTGGACCTGGCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR-3UTR TCA 90 bp | GCAACAGACCTTGGGGTACTATCACACCCTCTTCCTGATGCCCACCAGGAACAGCCTGGCAATGGAGGCTaGGAGGGGAGTGTGGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: ATDLGVLSHPLPDAHQEQPGNGG*EGSVEA Trigger: GGCTTCCACACTCCCCTCTCAGCCTCCATTGCCAGG...CTGTTCCTGGTGGGCATCAGGAAGAGGGTGTGATAGTACCCCAAGGTCTGTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR-3UTR TCA 90 bp | CCTCCTGAGCATCTATGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTATCACACCCTCTTCCTaGTGCCCACCAGGAACAGAC | + |
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Preference number: 2 (lower is better) Translates to: PPEHLCHPWARSSNRPWGITPSS*CPPGTD Trigger: GTCTGTTCCTGGTGGGCATCAGGAAGAGGGTGTGAT...ACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGATGCTCAGGAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR-3UTR CCA 90 bp | GGAGTCTGCAAACTCCTTACAGAGGTGAGGCAGAGGGCAGCGGGAAGGGTCTGGCATCTATGCCACCCCTaGGCCAGAAGCAGCAACAGA | + |
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Preference number: 2 (lower is better) Translates to: GVCKLLTEVRQRAAGRVWHLCHP*ARSSNR Trigger: TCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGATG...CCAGACCCTTCCCGCTGCCCTCTGCCTCACCTCTGTAAGGAGTTTGCAGACTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR CAA 90 bp | TGGTATCCCTCAGGACAGCACCCAAAGCTACCACATTCCCAGGCCTaGCGACAAGTGCCACCCTCCTGGAGAGCTACAAACAGTCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: WYPSGQHPKLPHSQA*RQVPPSWRATNSPL Trigger: GAGGGGACTGTTTGTAGCTCTCCAGGAGGGTGGCACTTGTCGCAAGGCCTGGGAATGTGGTAGCTTTGGGTGCTGTCCTGAGGGATACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR-3UTR TCA 90 bp | GGAGCCAGGTCCACCCCTGCCTTGATGCATGGCTGCAGGTGTTATAGGCCCTCCGAAAGGGGTCCCAGGTaGAAATGTGTGACACACAGA | + |
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Preference number: 2 (lower is better) Translates to: GARSTPALMHGCRCYRPSERGPR*KCVTHR Trigger: TCTGTGTGTCACACATTTTCACCTGGGACCCCTTTC...GGAGGGCCTATAACACCTGCAGCCATGCATCAAGGCAGGGGTGGACCTGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR-3UTR TCA 90 bp | GGAGTCTGCAAACTCCTTACAGAGGTGAGGCAGAGGGCAGCGGGAAGGGTCTGGTTGAACGCACTCTGTTaGGGCAGAGTCCTGGCAATG | + |
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Preference number: 2 (lower is better) Translates to: GVCKLLTEVRQRAAGRVWLNALC*GRVLAM Trigger: CATTGCCAGGACTCTGCCTCAACAGAGTGCGTTCAA...CCAGACCCTTCCCGCTGCCCTCTGCCTCACCTCTGTAAGGAGTTTGCAGACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR-3UTR TCA 90 bp | GCAACAGACCTTGGGGTACTATCACACCCTCTTCCTGATGCCCACCAGGAACAGCTCACAGGCTGTGAGTaGACAGCAGAGGAGCTGACC | + |
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Preference number: 2 (lower is better) Translates to: ATDLGVLSHPLPDAHQEQLTGCE*TAEELT Trigger: GGTCAGCTCCTCTGCTGTTCACTCACAGCCTGTGAG...CTGTTCCTGGTGGGCATCAGGAAGAGGGTGTGATAGTACCCCAAGGTCTGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR-3UTR CCA 90 bp | AGCATCTATGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTACTATCAAGATCAGCTACAGGGTaGCCTGCAGTGCTCTGCCCT | + |
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Preference number: 2 (lower is better) Translates to: SIYATPGPEAATDLGVLSRSATG*PAVLCP Trigger: AGGGCAGAGCACTGCAGGCCACCCTGTAGCTGATCT...TGATAGTACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGATGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR-3UTR TCA 90 bp | CCTCCTGAGCATCTATGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTCCAGGTGAAAATGTGTaGCACACAGAGTACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: PPEHLCHPWARSSNRPWGPGENV*HTEYTG Trigger: TCCTGTGTACTCTGTGTGTCACACATTTTCACCTGG...ACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGATGCTCAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR-3UTR CCA 90 bp | AGAGGCTGTGTGGACTATTCCCATGGTATCCCTCAGGACAGCACCCAAAGCTACGTTGAGGCAGAGTCCTaGCAATGGAGGCTGAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: RGCVDYSHGIPQDSTQSYVEAES*QWRLRG Trigger: CCCTCTCAGCCTCCATTGCCAGGACTCTGCCTCAAC...GTAGCTTTGGGTGCTGTCCTGAGGGATACCATGGGAATAGTCCACACAGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCTGTGTGGACTATTCCCATGGTATCCCTCAGGACAGCACCCAAAGCTACGAAGCTCACAGGCTGTaGGTGAACAGCAGAGGAGCT | + |
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Preference number: 2 (lower is better) Translates to: RGCVDYSHGIPQDSTQSYEAHRL*VNSRGA Trigger: AGCTCCTCTGCTGTTCACTCACAGCCTGTGAGCTTC...GTAGCTTTGGGTGCTGTCCTGAGGGATACCATGGGAATAGTCCACACAGCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR-3UTR GCA 90 bp | GGAGCCAGGTCCACCCCTGCCTTGATGCATGGCTGCAGGTGTTATAGGCCCTCCGTTAGTACTTATTATTaGCACATAGTGAGACCCACC | + |
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Preference number: 2 (lower is better) Translates to: GARSTPALMHGCRCYRPSVSTYY*HIVRPT Trigger: GGTGGGTCTCACTATGTGGCAATAATAAGTACTAAC...GGAGGGCCTATAACACCTGCAGCCATGCATCAAGGCAGGGGTGGACCTGGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR-3UTR TCA 90 bp | GAAGTAACAATGAAAATAACTTTAAGGTTGGGGTCAGCACAAGGAACTGTGTTACTCTGCCCTAAGAGCTaGGGGTCAGTCAGAGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: EVTMKITLRLGSAQGTVLLCPKS*GSVRAW Trigger: CCAGGCTCTGACTGACCCTCAGCTCTTAGGGCAGAG...TAACACAGTTCCTTGTGCTGACCCCAACCTTAAAGTTATTTTCATTGTTACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR-3UTR TCA 90 bp | GAAGTAACAATGAAAATAACTTTAAGGTTGGGGTCAGCACAAGGAACTGTGTTAAACTCCTTACAGAGGTaGGGCAGAGGGCAGCGGGAA | + |
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Preference number: 2 (lower is better) Translates to: EVTMKITLRLGSAQGTVLNSLQR*GRGQRE Trigger: TTCCCGCTGCCCTCTGCCTCACCTCTGTAAGGAGTT...TAACACAGTTCCTTGTGCTGACCCCAACCTTAAAGTTATTTTCATTGTTACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR-3UTR CCA 90 bp | GAAGTAACAATGAAAATAACTTTAAGGTTGGGGTCAGCACAAGGAACTGTGTTACAAGTGCCACCCTCCTaGAGAGCTACAAACAGTCCC | + |
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Preference number: 2 (lower is better) Translates to: EVTMKITLRLGSAQGTVLQVPPS*RATNSP Trigger: GGGACTGTTTGTAGCTCTCCAGGAGGGTGGCACTTG...TAACACAGTTCCTTGTGCTGACCCCAACCTTAAAGTTATTTTCATTGTTACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR-3UTR CCA 90 bp | GAAGTAACAATGAAAATAACTTTAAGGTTGGGGTCAGCACAAGGAACTGTGTTAAGCAGCAACAGACCTTaGGGTACTATCACACCCTCT | + |
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Preference number: 2 (lower is better) Translates to: EVTMKITLRLGSAQGTVLSSNRP*GTITPS Trigger: AGAGGGTGTGATAGTACCCCAAGGTCTGTTGCTGCT...TAACACAGTTCCTTGTGCTGACCCCAACCTTAAAGTTATTTTCATTGTTACTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR TCA 72 bp | GCTACAGGGTGGCCTGCAGTGCTCTGCCCTAAGAGCTaGGGGTCAGTCAGAGCCTGGGGCGGTGGAAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: ATGWPAVLCPKS*GSVRAWGGGSS Trigger: TGAGCTTCCACCGCCCCAGGCTCTGACTGACCCTCAGCTCTTAGGGCAGAGCACTGCAGGCCACCCTGTAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR GCA 72 bp | GCAGAGCCCACAGATCAGCTACAGGGTGGCCTGCAGTaGTCTGCCCTAAGAGCTGAGGGTCAGTCAGAGCCT | + |
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Preference number: 3 (lower is better) Translates to: AEPTDQLQGGLQ*SALRAEGQSEP Trigger: AGGCTCTGACTGACCCTCAGCTCTTAGGGCAGAGCACTGCAGGCCACCCTGTAGCTGATCTGTGGGCTCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR TCA 72 bp | CAGAGCCTGGGGCGGTGGAAGCTCACAGGCTGTGAGTaGACAGCAGAGGAGCTGACCGGACTGGAAATGAAG | + |
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Preference number: 3 (lower is better) Translates to: QSLGRWKLTGCE*TAEELTGLEMK Trigger: CTTCATTTCCAGTCCGGTCAGCTCCTCTGCTGTTCACTCACAGCCTGTGAGCTTCCACCGCCCCAGGCTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR TCA 72 bp | TCAGAAACCCAGGGAGTGGCCTTGAACGCACTCTGTTaGGGCAGAGTCCTGGCAATGGAGGCTGAGAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: SETQGVALNALC*GRVLAMEAERG Trigger: TCCCCTCTCAGCCTCCATTGCCAGGACTCTGCCTCAACAGAGTGCGTTCAAGGCCACTCCCTGGGTTTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR GCA 72 bp | CTGGAGAGCTACAAACAGTCCCCTCCTGAGCATCTATaGCACCCCTGGGCCAGAAGCAGCAACAGACCTTGG | + |
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Preference number: 3 (lower is better) Translates to: LESYKQSPPEHL*HPWARSSNRPW Trigger: CCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGATGCTCAGGAGGGGACTGTTTGTAGCTCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR TCA 72 bp | GAAGGTCACCTCACTCAGAAACCCAGGGAGTGGCCTTaGACGCACTCTGTTGAGGCAGAGTCCTGGCAATGG | + |
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Preference number: 3 (lower is better) Translates to: EGHLTQKPREWP*THSVEAESWQW Trigger: CCATTGCCAGGACTCTGCCTCAACAGAGTGCGTTCAAGGCCACTCCCTGGGTTTCTGAGTGAGGTGACCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR TCA 72 bp | ACAGGATCTGTTTTGGAGCCAGGTCCACCCCTGCCTTaGTGCATGGCTGCAGGTGTTATAGGCCCTCCATCC | + |
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Preference number: 3 (lower is better) Translates to: TGSVLEPGPPLP*CMAAGVIGPPS Trigger: GGATGGAGGGCCTATAACACCTGCAGCCATGCATCAAGGCAGGGGTGGACCTGGCTCCAAAACAGATCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR GCA 72 bp | CAGGACAGCACCCAAAGCTACCACATTCCCAGGCCTTaGGACAAGTGCCACCCTCCTGGAGAGCTACAAACA | + |
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Preference number: 3 (lower is better) Translates to: QDSTQSYHIPRP*DKCHPPGELQT Trigger: TGTTTGTAGCTCTCCAGGAGGGTGGCACTTGTCGCAAGGCCTGGGAATGTGGTAGCTTTGGGTGCTGTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR GCA 72 bp | TTTGGAGCCAGGTCCACCCCTGCCTTGATGCATGGCTaGAGGTGTTATAGGCCCTCCATCCTCAAAGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: FGARSTPALMHG*RCYRPSILKGA Trigger: AGCTCCTTTGAGGATGGAGGGCCTATAACACCTGCAGCCATGCATCAAGGCAGGGGTGGACCTGGCTCCAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR TCA 72 bp | GTTCGGATCTCAGAGCTGATGGAGCTGAGATCGCTCTaGAAAGCTCCCAGCATCTGTTCCATGCGCTCCAGG | + |
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Preference number: 3 (lower is better) Translates to: VRISELMELRSL*KAPSICSMRSR Trigger: CCTGGAGCGCATGGAACAGATGCTGGGAGCTTTTCAGAGCGATCTCAGCTCCATCAGCTCTGAGATCCGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000234201.2 |
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| 3UTR TCA 72 bp | TCTGTTCCATGCGCTCCAGGACGGCGTCACAGGCCGTaGTCTGATTGTGCAGAGACGCTATGTTTTCACTCT | + |
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Preference number: 3 (lower is better) Translates to: SVPCAPGRRHRP*SDCAETLCFHS Trigger: AGAGTGAAAACATAGCGTCTCTGCACAATCAGATCACGGCCTGTGACGCCGTCCTGGAGCGCATGGAACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000234201.2 |
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| 3UTR CCA 72 bp | AGCCACTTAGTGGCTGACACAATCTCAGAGGCTGTGTaGACTATTCCCATGGTATCCCTCAGGACAGCACCC | + |
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Preference number: 3 (lower is better) Translates to: SHLVADTISEAV*TIPMVSLRTAP Trigger: GGGTGCTGTCCTGAGGGATACCATGGGAATAGTCCACACAGCCTCTGAGATTGTGTCAGCCACTAAGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR GCA 72 bp | TTAAAGCGTTGCAGTATTAGGAAGGTTGAGAACCACTaGTCTGGAGTCTGCAAACTCCTTACAGAGGTGAGG | + |
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Preference number: 3 (lower is better) Translates to: LKRCSIRKVENH*SGVCKLLTEVR Trigger: CCTCACCTCTGTAAGGAGTTTGCAGACTCCAGAGCAGTGGTTCTCAACCTTCCTAATACTGCAACGCTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR CCA 90 bp | CTGTTCCAGCAGAGCCCACAGATCAGCTACAGGGTGGCCTGCAGTGCTCTGCCCTCACCGCGGCTGCCTTaGCATCCAGCTCCTGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: LFQQSPQISYRVACSALPSPRLP*HPAPVA Trigger: AGCTACAGGAGCTGGATGCCAAGGCAGCCGCGGTGA...GGGCAGAGCACTGCAGGCCACCCTGTAGCTGATCTGTGGGCTCTGCTGGAACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR TCA 90 bp | TGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTACTATCACACCCTCTCTCCTCCTCTACATCTaGGGCCCCAGCCCGCAACAC | + |
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Preference number: 4 (lower is better) Translates to: CHPWARSSNRPWGTITPSLLLYI*GPSPQH Trigger: GTGTTGCGGGCTGGGGCCTCAGATGTAGAGGAGGAG...AGAGGGTGTGATAGTACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | CCTCCTGAGCATCTATGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTCCAGCATCTGTTCCATaGGCTCCAGGACGGCGTCAC | + |
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Preference number: 4 (lower is better) Translates to: PPEHLCHPWARSSNRPWGPASVP*APGRRH Trigger: GTGACGCCGTCCTGGAGCGCATGGAACAGATGCTGG...ACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGATGCTCAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR CCA 90 bp | GGAGTCTGCAAACTCCTTACAGAGGTGAGGCAGAGGGCAGCGGGAAGGGTCTGGGCTGCTCCAGGAACCTaGGCTCGGTCACTGGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: GVCKLLTEVRQRAAGRVWAAPGT*ARSLEL Trigger: AAGCTCCAGTGACCGAGCCCAGGTTCCTGGAGCAGC...CCAGACCCTTCCCGCTGCCCTCTGCCTCACCTCTGTAAGGAGTTTGCAGACTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR CCA 90 bp | CCTCCTGAGCATCTATGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTTTCTCCACCTCCACCTaGAGCTGTCCCAGGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: PPEHLCHPWARSSNRPWGFSTST*SCPRSC Trigger: GCAGCTCCTGGGACAGCTCCAGGTGGAGGTGGAGAA...ACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGATGCTCAGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR TCA 90 bp | CCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTACTATCACACCCTCTTCAAGCCACGGATCAGCTaGGTGACTCGGGCTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: PPLGQKQQQTLGYYHTLFKPRIS*VTRASS Trigger: GGAGGAAGCCCGAGTCACTCAGCTGATCCGTGGCTT...GAAGAGGGTGTGATAGTACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | CCTCCTGAGCATCTATGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTGTGGAACAGGTCATGTaGAGCCGGGCCAGACACGAT | + |
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Preference number: 4 (lower is better) Translates to: PPEHLCHPWARSSNRPWGVEQVM*SRARHD Trigger: ATCGTGTCTGGCCCGGCTGCACATGACCTGTTCCAC...ACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGATGCTCAGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR TCA 90 bp | GCAACAGACCTTGGGGTACTATCACACCCTCTTCCTGATGCCCACCAGGAACAGCACGGATCAGCTGAGTaGCTCGGGCTTCCTCCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ATDLGVLSHPLPDAHQEQHGSAE*LGLPPL Trigger: GAGGGGAGGAAGCCCGAGTCACTCAGCTGATCCGTG...CTGTTCCTGGTGGGCATCAGGAAGAGGGTGTGATAGTACCCCAAGGTCTGTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | AAGCAGCAACAGACCTTGGGGTACTATCACACCCTCTTCCTGATGCCCACCAGGCTCTCTCACCGCGGCTaGCTTGGCATCCAGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KQQQTLGYYHTLFLMPTRLSHRG*LGIQLL Trigger: CAGGAGCTGGATGCCAAGGCAGCCGCGGTGAGAGAG...CCTGGTGGGCATCAGGAAGAGGGTGTGATAGTACCCCAAGGTCTGTTGCTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | CCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTACTATCACACCCTCTTCGCTGGGGGTCAGTGCTaGGGACACTCTGGACATTCA | + |
|
Preference number: 4 (lower is better) Translates to: PPLGQKQQQTLGYYHTLFAGGQC*GHSGHS Trigger: TGAATGTCCAGAGTGTCCGCAGCACTGACCCCCAGC...GAAGAGGGTGTGATAGTACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | AGCATCTATGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTACTATCAGGCGCTGGGGGTCAGTaGTGCGGACACTCTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SIYATPGPEAATDLGVLSGAGGQ*CGHSGH Trigger: ATGTCCAGAGTGTCCGCAGCACTGACCCCCAGCGCC...TGATAGTACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGATGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | AGCAGAGCCCACAGATCAGCTACAGGGTGGCCTGCAGTGCTCTGCCCTAAGAGCCCTGGAGGAGAACTCTaGAGCCACTCGGAGGACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SRAHRSATGWPAVLCPKSPGGEL*SHSEDK Trigger: TTTGTCCTCCGAGTGGCTGCAGAGTTCTCCTCCAGG...GCTCTTAGGGCAGAGCACTGCAGGCCACCCTGTAGCTGATCTGTGGGCTCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | AAGCAGCAACAGACCTTGGGGTACTATCACACCCTCTTCCTGATGCCCACCAGGCGGAGCCGCTCAGCCTaGCCACGCTCAATCAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KQQQTLGYYHTLFLMPTRRSRSA*PRSIKA Trigger: AGCCTTGATTGAGCGTGGGCAGGCTGAGCGGCTCCG...CCTGGTGGGCATCAGGAAGAGGGTGTGATAGTACCCCAAGGTCTGTTGCTGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR CCA 90 bp | AACAGCAGAGGAGCTGACCGGACTGGAAATGAAGGTCACCTCACTCAGAAACCCAGTCCCCCAAGGCGCTaGGGGTCAGTGCTGCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: NSRGADRTGNEGHLTQKPSPPRR*GSVLRT Trigger: TGTCCGCAGCACTGACCCCCAGCGCCTTGGGGGACT...GGGTTTCTGAGTGAGGTGACCTTCATTTCCAGTCCGGTCAGCTCCTCTGCTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR TCA 90 bp | CCTCTTCCTGATGCCCACCAGGAACAGACTAGGTCTACAATAAACACATGCTGGGGTCCAGCACGCCTCTaGCGTCAGCACAGGCAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLPDAHQEQTRSTINTCWGPARL*RQHRQR Trigger: CCGCTGCCTGTGCTGACGTCAGAGGCGTGCTGGACC...CCAGCATGTGTTTATTGTAGACCTAGTCTGTTCCTGGTGGGCATCAGGAAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR TCA 90 bp | TGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTACTATCACACCCTCTACTCAGGGACTCCACTaGTGCCTTCCAGGAACTACC | + |
|
Preference number: 4 (lower is better) Translates to: CHPWARSSNRPWGTITPSTQGLH*CLPGTT Trigger: GGTAGTTCCTGGAAGGCATCAGTGGAGTCCCTGAGT...AGAGGGTGTGATAGTACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | CCTCCTGAGCATCTATGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTAAGTTTCCCCCGAACTaGCTGTCGGTTACGAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PPEHLCHPWARSSNRPWGKFPPN*LSVTKS Trigger: CGACTTCGTAACCGACAGGCAGTTCGGGGGAAACTT...ACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGATGCTCAGGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | GGAGCCAGGTCCACCCCTGCCTTGATGCATGGCTGCAGGTGTTATAGGCCCTCCCGAGCATTGAGCAGCTaGTGGAAACTTTCCACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GARSTPALMHGCRCYRPSRALSS*WKLSTS Trigger: AGAGGTGGAAAGTTTCCAGCAGCTGCTCAATGCTCG...GGAGGGCCTATAACACCTGCAGCCATGCATCAAGGCAGGGGTGGACCTGGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR CCA 90 bp | AGAGGCTGTGTGGACTATTCCCATGGTATCCCTCAGGACAGCACCCAAAGCTACCGGCCCATGACGGCGTaGAACAGGTCATGTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGCVDYSHGIPQDSTQSYRPMTA*NRSCAA Trigger: GGCTGCACATGACCTGTTCCACGCCGTCATGGGCCG...GTAGCTTTGGGTGCTGTCCTGAGGGATACCATGGGAATAGTCCACACAGCCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR CAA 72 bp | TCTATGCCACCCCTGGGCCAGAAGCAGCAACAGACCTaGGGGTACTATCACACCCTCTTCCTGATGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SMPPLGQKQQQT*GYYHTLFLMPT Trigger: GGTGGGCATCAGGAAGAGGGTGTGATAGTACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | AACAGCAGAGGAGCTGACCGGACTGGAAATGAAGGTCACCTCACTCAGAAACCCTCCAGCTCCTGTAGCTaGTCCAGGAACCTGGGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NSRGADRTGNEGHLTQKPSSSCS*SRNLGS Trigger: CGAGCCCAGGTTCCTGGAGCAGCTACAGGAGCTGGA...GGGTTTCTGAGTGAGGTGACCTTCATTTCCAGTCCGGTCAGCTCCTCTGCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | GCAACAGACCTTGGGGTACTATCACACCCTCTTCCTGATGCCCACCAGGAACAGAGCAAGGCAAGCACCTaGTCCCAGTACCTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ATDLGVLSHPLPDAHQEQSKAST*SQYLSR Trigger: CCTGGACAGGTACTGGGAGCAGGTGCTTGCCTTGCT...CTGTTCCTGGTGGGCATCAGGAAGAGGGTGTGATAGTACCCCAAGGTCTGTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR CCA 90 bp | GGAGCCAGGTCCACCCCTGCCTTGATGCATGGCTGCAGGTGTTATAGGCCCTCCGCATTGAGCAGCTGCTaGAAACTTTCCACCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GARSTPALMHGCRCYRPSALSSC*KLSTSL Trigger: CAAAGAGGTGGAAAGTTTCCAGCAGCTGCTCAATGC...GGAGGGCCTATAACACCTGCAGCCATGCATCAAGGCAGGGGTGGACCTGGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR CAA 72 bp | TCAGGACAGCACCCAAAGCTACCACATTCCCAGGCCTaGCGACAAGTGCCACCCTCCTGGAGAGCTACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SGQHPKLPHSQA*RQVPPSWRATN Trigger: GTTTGTAGCTCTCCAGGAGGGTGGCACTTGTCGCAAGGCCTGGGAATGTGGTAGCTTTGGGTGCTGTCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| 3UTR CAA 72 bp | GACAGGATCTGTTTTGGAGCCAGGTCCACCCCTGCCTaGATGCATGGCTGCAGGTGTTATAGGCCCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: DRICFGARSTPA*MHGCRCYRPSI Trigger: GATGGAGGGCCTATAACACCTGCAGCCATGCATCAAGGCAGGGGTGGACCTGGCTCCAAAACAGATCCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR TCA 90 bp | AGCATCTATGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTACTATCACTTCCAGAATTGCTGTaGCCAGAGCAGAGGGCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SIYATPGPEAATDLGVLSLPELL*PEQRAP Trigger: TGGTGCCCTCTGCTCTGGTCACAGCAATTCTGGAAG...TGATAGTACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR TCA 90 bp | CCTCTTCCTGATGCCCACCAGGAACAGACTAGGTCTACAATAAACACATGCTGGTCTTCGTCACTGCCTTaGCCCGGAGCCGGTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PLPDAHQEQTRSTINTCWSSSLP*PGAGPA Trigger: TGCTGGACCGGCTCCGGGTCAAGGCAGTGACGAAGA...CCAGCATGTGTTTATTGTAGACCTAGTCTGTTCCTGGTGGGCATCAGGAAGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | GCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTACTATCACACCCTCTTCTCATCCTCCAGGTTTaGCTGGATGTGAACATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ATPGPEAATDLGVLSHPLLILQV*LDVNIH Trigger: GTGGATGTTCACATCCAGGCAAACCTGGAGGATGAG...AAGAGGGTGTGATAGTACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | GCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTACTATCACACCCTCTTAACTTTCCACCTCTTTaGTGTCATCAGCAGCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: ATPGPEAATDLGVLSHPLNFPPL*CHQQPA Trigger: AGCGGGCTGCTGATGACAGCAAAGAGGTGGAAAGTT...AAGAGGGTGTGATAGTACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR CCA 90 bp | AAGCAGCAACAGACCTTGGGGTACTATCACACCCTCTTCCTGATGCCCACCAGGCCTGGGCTCGGTCACTaGAGCTTCCAGAATTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KQQQTLGYYHTLFLMPTRPGLGH*SFQNCC Trigger: ACAGCAATTCTGGAAGCTCCAGTGACCGAGCCCAGG...CCTGGTGGGCATCAGGAAGAGGGTGTGATAGTACCCCAAGGTCTGTTGCTGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR TCA 90 bp | GCAACAGACCTTGGGGTACTATCACACCCTCTTCCTGATGCCCACCAGGAACAGTCACAGGCCGTGATCTaGTTGTGCAGAGACGCTATG | + |
|
Preference number: 4 (lower is better) Translates to: ATDLGVLSHPLPDAHQEQSQAVI*LCRDAM Trigger: CATAGCGTCTCTGCACAATCAGATCACGGCCTGTGA...CTGTTCCTGGTGGGCATCAGGAAGAGGGTGTGATAGTACCCCAAGGTCTGTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | AGCATCTATGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTACTATCATGGAGCTTCCAGAATTaGTGTGACCAGAGCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SIYATPGPEAATDLGVLSWSFQN*CDQSRG Trigger: CCCTCTGCTCTGGTCACAGCAATTCTGGAAGCTCCA...TGATAGTACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGATGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR TCA 90 bp | AGAGGCTGTGTGGACTATTCCCATGGTATCCCTCAGGACAGCACCCAAAGCTACGAGCTGAGATCGCTCTaGAAAGCTCCCAGCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RGCVDYSHGIPQDSTQSYELRSL*KAPSIC Trigger: ACAGATGCTGGGAGCTTTTCAGAGCGATCTCAGCTC...GTAGCTTTGGGTGCTGTCCTGAGGGATACCATGGGAATAGTCCACACAGCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | AACAGCAGAGGAGCTGACCGGACTGGAAATGAAGGTCACCTCACTCAGAAACCCTCCCGGATTGACTTCTaGTCAATCTGCTGCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NSRGADRTGNEGHLTQKPSRIDF*SICCSS Trigger: GGAGCTGCAGCAGATTGAGCAGAAGTCAATCCGGGA...GGGTTTCTGAGTGAGGTGACCTTCATTTCCAGTCCGGTCAGCTCCTCTGCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | CCTCTTCCTGATGCCCACCAGGAACAGACTAGGTCTACAATAAACACATGCTGGGACGTCCCTCTTCGCTaGAATGTTGCGGAACCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLPDAHQEQTRSTINTCWDVPLR*NVAEPE Trigger: CTCCGGTTCCGCAACATTGCAGCGAAGAGGGACGTC...CCAGCATGTGTTTATTGTAGACCTAGTCTGTTCCTGGTGGGCATCAGGAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR TCA 90 bp | TCTGATTGTGCAGAGACGCTATGTTTTCACTCTCTTGGATATAGTCCCGGATTGCTCCTCCTCTACATCTaGGGCCCCAGCCCGCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: SDCAETLCFHSLGYSPGLLLLYI*GPSPQH Trigger: GTGTTGCGGGCTGGGGCCTCAGATGTAGAGGAGGAG...CAATCCGGGACTATATCCAAGAGAGTGAAAACATAGCGTCTCTGCACAATCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000234201.2 |
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| CDS-3UTR TCA 90 bp | AGCATCTATGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTACTATCATGGTCATGGGCTTTCTaGAGGAGTAGATCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SIYATPGPEAATDLGVLSWSWAF*RSRSSG Trigger: TCCAGAAGATCTACTCCTTCAGAAAGCCCATGACCA...TGATAGTACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR TCA 90 bp | GGAGTCTGCAAACTCCTTACAGAGGTGAGGCAGAGGGCAGCGGGAAGGGTCTGGTCATGTCATAGTTGTTaGTCAGAAACACAAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVCKLLTEVRQRAAGRVWSCHSC*SETQAA Trigger: AGCAGCTTGTGTTTCTGATCAACAACTATGACATGA...CCAGACCCTTCCCGCTGCCCTCTGCCTCACCTCTGTAAGGAGTTTGCAGACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR TCA 90 bp | AGAGGCTGTGTGGACTATTCCCATGGTATCCCTCAGGACAGCACCCAAAGCTACCTTCGCATTACATCCTaGCTCAGGGACTCCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RGCVDYSHGIPQDSTQSYLRITS*LRDSTD Trigger: ATCAGTGGAGTCCCTGAGTCAGGATGTAATGCGAAG...GTAGCTTTGGGTGCTGTCCTGAGGGATACCATGGGAATAGTCCACACAGCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | AGCATCTATGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTACTATCAATCAGAAACACAAGCTaGTCCTTCCTGGAGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SIYATPGPEAATDLGVLSIRNTS*SFLEEN Trigger: GTTCTCCTCCAGGAAGGAGCAGCTTGTGTTTCTGAT...TGATAGTACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGATGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | AACAGCAGAGGAGCTGACCGGACTGGAAATGAAGGTCACCTCACTCAGAAACCCTCTTCGCTGCAATGTTaGGGAACCGGAGAACAATGT | + |
|
Preference number: 4 (lower is better) Translates to: NSRGADRTGNEGHLTQKPSSLQC*GTGEQC Trigger: ACATTGTTCTCCGGTTCCGCAACATTGCAGCGAAGA...GGGTTTCTGAGTGAGGTGACCTTCATTTCCAGTCCGGTCAGCTCCTCTGCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR CCA 90 bp | AAGCAGCAACAGACCTTGGGGTACTATCACACCCTCTTCCTGATGCCCACCAGGAGAGAAAAACAGCAATaGCATCGTAGCAGTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQQQTLGYYHTLFLMPTRREKQQ*HRSSQP Trigger: TGGCTGACTGCTACGATGCCATTGCTGTTTTTCTCT...CCTGGTGGGCATCAGGAAGAGGGTGTGATAGTACCCCAAGGTCTGTTGCTGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR CCA 90 bp | CCTCTTCCTGATGCCCACCAGGAACAGACTAGGTCTACAATAAACACATGCTGGGTGCTGCGGACACTCTaGACATTCATCTCCAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: PLPDAHQEQTRSTINTCWVLRTL*TFISRI Trigger: GATCCTGGAGATGAATGTCCAGAGTGTCCGCAGCAC...CCAGCATGTGTTTATTGTAGACCTAGTCTGTTCCTGGTGGGCATCAGGAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR CCA 90 bp | AGCATCTATGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTACTATCAAACCGGAGAACAATGTaGATACAGAGAAAAACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIYATPGPEAATDLGVLSNRRTM*IQRKTA Trigger: TGCTGTTTTTCTCTGTATCCACATTGTTCTCCGGTT...TGATAGTACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGATGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR GCA 90 bp | GAAGTAACAATGAAAATAACTTTAAGGTTGGGGTCAGCACAAGGAACTGTGTTAGGGCATAGTGCTGGCTaGGGAAGAGCGCTTCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: EVTMKITLRLGSAQGTVLGHSAG*GRALRM Trigger: CATTCGAAGCGCTCTTCCGCAGCCAGCACTATGCCC...TAACACAGTTCCTTGTGCTGACCCCAACCTTAAAGTTATTTTCATTGTTACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS GCA 90 bp | TCCTGCTCTCTCACCGCGGCTGCCTTGGCATCCAGCTCCTGTAGCTaGTCCAGGAACCTGGGCTCCAGGACGGCGTCACAGGCCGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: SCSLTAAALASSSCS*SRNLGSRTASQAVI Trigger: GATCACGGCCTGTGACGCCGTCCTGGAGCCCAGGTTCCTGGAGCAGCTACAGGAGCTGGATGCCAAGGCAGCCGCGGTGAGAGAGCAGGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173196.3 |
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| CDS GCA 90 bp | CACCATGAGGTGATGGATGTTGATGAGCTCGGCCCTGGCCGGGAGTaGGCGGAGCTGGGGCTGAGACAGCACCCGGTGGAAGCGATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: HHEVMDVDELGPGRE*AELGLRQHPVEAMV Trigger: TACCATCGCTTCCACCGGGTGCTGTCTCAGCCCCAGCTCCGCGCACTCCCGGCCAGGGCCGAGCTCATCAACATCCATCACCTCATGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS-3UTR CAA 90 bp | CTGTTCCAGCAGAGCCCACAGATCAGCTACAGGGTGGCCTGCAGTGCTCTGCCCATCTTCGTCACTGCCTaGACCCGGAGCCGGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LFQQSPQISYRVACSALPIFVTA*TRSRSS Trigger: GCTGGACCGGCTCCGGGTCAAGGCAGTGACGAAGAT...GGGCAGAGCACTGCAGGCCACCCTGTAGCTGATCTGTGGGCTCTGCTGGAACAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS GCA 90 bp | TCCTGCTCTCTCACCGCGGCTGCCTTGGCATCCAGCTCCTGTAGCTaGTCCAGGAACCTGGGCTCGGTCACTGGAGCTTCCAGAATTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SCSLTAAALASSSCS*SRNLGSVTGASRIA Trigger: AGCAATTCTGGAAGCTCCAGTGACCGAGCCCAGGTTCCTGGAGCAGCTACAGGAGCTGGATGCCAAGGCAGCCGCGGTGAGAGAGCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS CCA 90 bp | GTGTCCAGTCCCCCAAGGCGCTGGGGGTCAGTGCTGCGGACACTCTaGACATTCATCTCCAGGATCAGCTCAAACCGAGGCCACAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSSPPRRWGSVLRTL*TFISRISSNRGHSK Trigger: CTTGCTGTGGCCTCGGTTTGAGCTGATCCTGGAGATGAATGTCCAGAGTGTCCGCAGCACTGACCCCCAGCGCCTTGGGGGACTGGACAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS CCA 90 bp | AAGAGCGCTTCGAATGGATACCTCTGCTCTCCACGTTGGGCAGTATaGGGCACTAGGATGGGGGCCTCCAGCTCGGCCGGTGAGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: KSASNGYLCSPRWAV*GTRMGASSSAGEMT Trigger: TGTCATCTCACCGGCCGAGCTGGAGGCCCCCATCCTAGTGCCCCATACTGCCCAACGTGGAGAGCAGAGGTATCCATTCGAAGCGCTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
||
| CDS-3UTR CAA 90 bp | GCAACAGACCTTGGGGTACTATCACACCCTCTTCCTGATGCCCACCAGGAACAGCTCACCGCGGCTGCCTaGGCATCCAGCTCCTGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: ATDLGVLSHPLPDAHQEQLTAAA*ASSSCS Trigger: GCTACAGGAGCTGGATGCCAAGGCAGCCGCGGTGAG...CTGTTCCTGGTGGGCATCAGGAAGAGGGTGTGATAGTACCCCAAGGTCTGTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS GCA 90 bp | CGAACTGCCTGTCGGTTACGAAGTCGGATGTTCATGGCCCCCGACTaGTCCTGCAGGGTTCGGATCTCAGAGCTGATGGAGCTGAGATCG | + |
|
Preference number: 5 (lower is better) Translates to: RTACRLRSRMFMAPD*SCRVRISELMELRS Trigger: CGATCTCAGCTCCATCAGCTCTGAGATCCGAACCCTGCAGGAGCAGTCGGGGGCCATGAACATCCGACTTCGTAACCGACAGGCAGTTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
||
| CDS-3UTR CAA 90 bp | CTGTTCCAGCAGAGCCCACAGATCAGCTACAGGGTGGCCTGCAGTGCTCTGCCCAAACTTTCCACCTCTTaGCTGTCATCAGCAGCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LFQQSPQISYRVACSALPKLSTS*LSSAAR Trigger: GCGGGCTGCTGATGACAGCAAAGAGGTGGAAAGTTT...GGGCAGAGCACTGCAGGCCACCCTGTAGCTGATCTGTGGGCTCTGCTGGAACAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
||
| CDS CCA 90 bp | TCCAGGTGTTTCAGCGTCATGGAGAGCGTGCGGCCCATGACGGCGTaGAACAGGTCATGTGCAGCCGGGCCAGACACGATGAAAAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRCFSVMESVRPMTA*NRSCAAGPDTMKNS Trigger: TGAATTTTTCATCGTGTCTGGCCCGGCTGCACATGACCTGTTCCACGCCGTCATGGGCCGCACGCTCTCCATGACGCTGAAACACCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
||
| CDS-3UTR CAA 90 bp | TGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTACTATCACACCCTCTTGCAGCGTGCGTTCATaGGGGATCGTCTGGTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: CHPWARSSNRPWGTITPSCSVRS*GIVWLM Trigger: CATCAACCAGACGATCCCCAATGAACGCACGCTGCA...AGAGGGTGTGATAGTACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
||
| CDS-3UTR CAA 90 bp | CCTCCTGAGCATCTATGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTTCCTGTGTCCGAGCATaGAGCAGCTGCTGGAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: PPEHLCHPWARSSNRPWGSCVRA*SSCWKL Trigger: AAGTTTCCAGCAGCTGCTCAATGCTCGGACACAGGA...ACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGATGCTCAGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
||
| CDS GCA 90 bp | CTGCAGCGTGCGTTCATTGGGGATCGTCTGGTTGATGCTGACAAGTaGAGAGGAGAACTCAGCATAGCGGCGTGTGATATAGTGGGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LQRAFIGDRLVDADK*RGELSIAACDIVGP Trigger: CGGCCCCACTATATCACACGCCGCTATGCTGAGTTCTCCTCTGCACTTGTCAGCATCAACCAGACGATCCCCAATGAACGCACGCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
||
| CDS-3UTR CAA 90 bp | CCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTACTATCACACCCTCTTCCTCTTCGCTGCAATGTaGCGGAACCGGAGAACAATG | + |
|
Preference number: 5 (lower is better) Translates to: PPLGQKQQQTLGYYHTLFLFAAM*RNRRTM Trigger: CATTGTTCTCCGGTTCCGCAACATTGCAGCGAAGAG...GAAGAGGGTGTGATAGTACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS GCA 90 bp | CACCTGCTCCCAGTACCTGTCCAGGGCAGGGACGTCCCTCTTCGCTaGAATGTTGCGGAACCGGAGAACAATGTGGATACAGAGAAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: HLLPVPVQGRDVPLR*NVAEPENNVDTEKN Trigger: GTTTTTCTCTGTATCCACATTGTTCTCCGGTTCCGCAACATTGCAGCGAAGAGGGACGTCCCTGCCCTGGACAGGTACTGGGAGCAGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
||
| CDS GCA 90 bp | GACAGCAGCTCCTCAATGAACTCCTGTGTCCGAGCATTGAGCAGCTaGTGGAAACTTTCCACCTCTTTGCTGTCATCAGCAGCCCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: DSSSSMNSCVRALSS*WKLSTSLLSSAARS Trigger: GGAGCGGGCTGCTGATGACAGCAAAGAGGTGGAAAGTTTCCAGCAGCTGCTCAATGCTCGGACACAGGAGTTCATTGAGGAGCTGCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS-3UTR CAA 90 bp | AGGACAGCACCCAAAGCTACCACATTCCCAGGCCTTGCGACAAGTGCCACCCTCTCATCCCTGATCTCCTaGGCTGTAGCACGCTCATTA | + |
|
Preference number: 5 (lower is better) Translates to: RTAPKATTFPGLATSATLSSLIS*AVARSL Trigger: TAATGAGCGTGCTACAGCCAAGGAGATCAGGGATGA...GAGGGTGGCACTTGTCGCAAGGCCTGGGAATGTGGTAGCTTTGGGTGCTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
||
| CDS TCA 90 bp | CAGCAGCCCGCTCCATCAGCACCCCGAGCATCATGTCATAGTTGTTaGTCAGAAACACAAGCTGCTCCTTCCTGGAGGAGAACTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: QQPAPSAPRASCHSC*SETQAAPSWRRTLQ Trigger: CTGCAGAGTTCTCCTCCAGGAAGGAGCAGCTTGTGTTTCTGATCAACAACTATGACATGATGCTCGGGGTGCTGATGGAGCGGGCTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
||
| CDS TCA 90 bp | GTAGCTGCTCCAGGAACCTGGGCTCCAGGACGGCGTCACAGGCCGTaGTCTGATTGTGCAGAGACGCTATGTTTTCACTCTCTTGGATAT | + |
|
Preference number: 5 (lower is better) Translates to: VAAPGTWAPGRRHRP*SDCAETLCFHSLGY Trigger: ATATCCAAGAGAGTGAAAACATAGCGTCTCTGCACAATCAGATCACGGCCTGTGACGCCGTCCTGGAGCCCAGGTTCCTGGAGCAGCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173196.3 |
||
| CDS GCA 90 bp | CGTCATGGAGAGCGTGCGGCCCATGACGGCGTGGAACAGGTCATGTaGAGCCGGGCCAGACACGATGAAAAATTCACAGATGAAAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: RHGERAAHDGVEQVM*SRARHDEKFTDEKI Trigger: TATCTTTTCATCTGTGAATTTTTCATCGTGTCTGGCCCGGCTGCACATGACCTGTTCCACGCCGTCATGGGCCGCACGCTCTCCATGACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
||
| CDS GCA 90 bp | CCCAGTACCTGTCCAGGGCAGGGACGTCCCTCTTCGCTGCAATGTTaGGGAACCGGAGAACAATGTGGATACAGAGAAAAACAGCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: PSTCPGQGRPSSLQC*GTGEQCGYREKQQW Trigger: CCATTGCTGTTTTTCTCTGTATCCACATTGTTCTCCGGTTCCGCAACATTGCAGCGAAGAGGGACGTCCCTGCCCTGGACAGGTACTGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
||
| CDS CCA 90 bp | AGCAGCTCCTCAATGAACTCCTGTGTCCGAGCATTGAGCAGCTGCTaGAAACTTTCCACCTCTTTGCTGTCATCAGCAGCCCGCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSMNSCVRALSSC*KLSTSLLSSAARSI Trigger: GATGGAGCGGGCTGCTGATGACAGCAAAGAGGTGGAAAGTTTCCAGCAGCTGCTCAATGCTCGGACACAGGAGTTCATTGAGGAGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS GCA 90 bp | AAAGATATTCACGGCAAGAATTGTCGAGGAGGGCATAGTGCTGGCTaGGGAAGAGCGCTTCGAATGGATACCTCTGCTCTCCACGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: KDIHGKNCRGGHSAG*GRALRMDTSALHVG Trigger: CCCAACGTGGAGAGCAGAGGTATCCATTCGAAGCGCTCTTCCGCAGCCAGCACTATGCCCTCCTCGACAATTCTTGCCGTGAATATCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
||
| CDS-3UTR CAA 90 bp | CCTCCTGAGCATCTATGCCACCCCTGGGCCAGAAGCAGCAACAGACCTTGGGGTGTTCCATTTCGGAAGTaGGTAAAACTTCGCATTACA | + |
|
Preference number: 5 (lower is better) Translates to: PPEHLCHPWARSSNRPWGVPFRK*VKLRIT Trigger: TGTAATGCGAAGTTTTACCAACTTCCGAAATGGAAC...ACCCCAAGGTCTGTTGCTGCTTCTGGCCCAGGGGTGGCATAGATGCTCAGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
||
| CDS TCA 90 bp | CCATTAGGTCGTCTTTCTCAGCAACTTCCTCGTACTGCACTTTCATaGGCCGCCCCACATAGGATCGGTAGTAGGACAGGTAGATCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLGRLSQQLPRTALS*AAPHRIGSRTGRSC Trigger: GCAAGATCTACCTGTCCTACTACCGATCCTATGTGGGGCGGCTCATGAAAGTGCAGTACGAGGAAGTTGCTGAGAAAGACGACCTAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
||
| CDS CCA 90 bp | TGTTGCGGAACCGGAGAACAATGTGGATACAGAGAAAAACAGCAATaGCATCGTAGCAGTCAGCCAGGTAGGACTCCAGGTGTTTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: CCGTGEQCGYREKQQ*HRSSQPGRTPGVSA Trigger: CGCTGAAACACCTGGAGTCCTACCTGGCTGACTGCTACGATGCCATTGCTGTTTTTCTCTGTATCCACATTGTTCTCCGGTTCCGCAACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS-3UTR CAA 90 bp | GCTGACACAATCTCAGAGGCTGTGTGGACTATTCCCATGGTATCCCTCAGGACAACTCATCCTCCAGGTTaGCCTGGATGTGAACATCCA | + |
|
Preference number: 5 (lower is better) Translates to: ADTISEAVWTIPMVSLRTTHPPG*PGCEHP Trigger: TGGATGTTCACATCCAGGCAAACCTGGAGGATGAGT...TGTCCTGAGGGATACCATGGGAATAGTCCACACAGCCTCTGAGATTGTGTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
||
| CDS-3UTR CAA 90 bp | AACAGCAGAGGAGCTGACCGGACTGGAAATGAAGGTCACCTCACTCAGAAACCCAGATCCACACCCGTTTaGAGAGCTTCCTTCACTAAC | + |
|
Preference number: 5 (lower is better) Translates to: NSRGADRTGNEGHLTQKPRSTPV*RASFTN Trigger: GTTAGTGAAGGAAGCTCTCAAAACGGGTGTGGATCT...GGGTTTCTGAGTGAGGTGACCTTCATTTCCAGTCCGGTCAGCTCCTCTGCTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
||
| CDS-3UTR CAA 90 bp | AGAGGCTGTGTGGACTATTCCCATGGTATCCCTCAGGACAGCACCCAAAGCTACAGAAGAAGCCTTTCTTaGCTGTGTCTTCAACACCCA | + |
|
Preference number: 5 (lower is better) Translates to: RGCVDYSHGIPQDSTQSYRRSLS*LCLQHP Trigger: TGGGTGTTGAAGACACAGCAAAGAAAGGCTTCTTCT...GTAGCTTTGGGTGCTGTCCTGAGGGATACCATGGGAATAGTCCACACAGCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
||
| CDS TCA 90 bp | ATGCTGGTTCCATTTCGGAAGTTGGTAAAACTTCGCATTACATCCTaGCTCAGGGACTCCACTGATGCCTTCCAGGAACTACCAAAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: MLVPFRKLVKLRITS*LRDSTDAFQELPKP Trigger: TGGCTTTGGTAGTTCCTGGAAGGCATCAGTGGAGTCCCTGAGTCAGGATGTAATGCGAAGTTTTACCAACTTCCGAAATGGAACCAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS GCA 72 bp | CTGACGTCAGCACAGGCAGCGGTGCCCATAGCCTCCTaGTCTCTCACCGCGGCTGCCTTGGCATCCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LTSAQAAVPIAS*SLTAAALASSS Trigger: GGAGCTGGATGCCAAGGCAGCCGCGGTGAGAGAGCAGGAGGCTATGGGCACCGCTGCCTGTGCTGACGTCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS GCA 72 bp | GTGATGGATGTTGATGAGCTCGGCCCTGGCCGGGAGTaGGCGGAGCTGGGGCTGAGACAGCACCCGGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: VMDVDELGPGRE*AELGLRQHPVE Trigger: TTCCACCGGGTGCTGTCTCAGCCCCAGCTCCGCGCACTCCCGGCCAGGGCCGAGCTCATCAACATCCATCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS TCA 72 bp | CCAGGTGTTTCAGCGTCATGGAGAGCGTGCGGCCCATaGCGGCGTGGAACAGGTCATGTGCAGCCGGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PGVSASWRACGP*RRGTGHVQPGQ Trigger: CTGGCCCGGCTGCACATGACCTGTTCCACGCCGTCATGGGCCGCACGCTCTCCATGACGCTGAAACACCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS GCA 72 bp | GTGACTCGGGCTTCCTCCCCTCGGAGCCGCTCAGCCTaGCCACGCTCAATCAAGGCTTCAGCCTCCTTCACG | + |
|
Preference number: 6 (lower is better) Translates to: VTRASSPRSRSA*PRSIKASASFT Trigger: CGTGAAGGAGGCTGAAGCCTTGATTGAGCGTGGGCAGGCTGAGCGGCTCCGAGGGGAGGAAGCCCGAGTCAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS CCA 72 bp | TTCAGCGTCATGGAGAGCGTGCGGCCCATGACGGCGTaGAACAGGTCATGTGCAGCCGGGCCAGACACGATG | + |
|
Preference number: 6 (lower is better) Translates to: FSVMESVRPMTA*NRSCAAGPDTM Trigger: CATCGTGTCTGGCCCGGCTGCACATGACCTGTTCCACGCCGTCATGGGCCGCACGCTCTCCATGACGCTGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS GCA 72 bp | GCCGAGTGTCCAGTCCCCCAAGGCGCTGGGGGTCAGTaGTGCGGACACTCTGGACATTCATCTCCAGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: AECPVPQGAGGQ*CGHSGHSSPGS Trigger: TGATCCTGGAGATGAATGTCCAGAGTGTCCGCAGCACTGACCCCCAGCGCCTTGGGGGACTGGACACTCGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS CCA 72 bp | TCGAATGGATACCTCTGCTCTCCACGTTGGGCAGTATaGGGCACTAGGATGGGGGCCTCCAGCTCGGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: SNGYLCSPRWAV*GTRMGASSSAG Trigger: ACCGGCCGAGCTGGAGGCCCCCATCCTAGTGCCCCATACTGCCCAACGTGGAGAGCAGAGGTATCCATTCGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS CCA 72 bp | CCCCCAAGGCGCTGGGGGTCAGTGCTGCGGACACTCTaGACATTCATCTCCAGGATCAGCTCAAACCGAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PPRRWGSVLRTL*TFISRISSNRG Trigger: GCCTCGGTTTGAGCTGATCCTGGAGATGAATGTCCAGAGTGTCCGCAGCACTGACCCCCAGCGCCTTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS TCA 72 bp | GATGCCTTCCAGGAACTACCAAAGCCACGGATCAGCTaGGTGACTCGGGCTTCCTCCCCTCGGAGCCGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: DAFQELPKPRIS*VTRASSPRSRS Trigger: TGAGCGGCTCCGAGGGGAGGAAGCCCGAGTCACTCAGCTGATCCGTGGCTTTGGTAGTTCCTGGAAGGCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS CCA 72 bp | CCCGAACTGCCTGTCGGTTACGAAGTCGGATGTTCATaGCCCCCGACTGCTCCTGCAGGGTTCGGATCTCAG | + |
|
Preference number: 6 (lower is better) Translates to: PELPVGYEVGCS*PPTAPAGFGSQ Trigger: CTGAGATCCGAACCCTGCAGGAGCAGTCGGGGGCCATGAACATCCGACTTCGTAACCGACAGGCAGTTCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS CCA 72 bp | AAGAGCGCTTCGAATGGATACCTCTGCTCTCCACGTTaGGCAGTATGGGGCACTAGGATGGGGGCCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KSASNGYLCSPR*AVWGTRMGASS Trigger: GCTGGAGGCCCCCATCCTAGTGCCCCATACTGCCCAACGTGGAGAGCAGAGGTATCCATTCGAAGCGCTCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS CCA 72 bp | GAGGGCATAGTGCTGGCTGCGGAAGAGCGCTTCGAATaGATACCTCTGCTCTCCACGTTGGGCAGTATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: EGIVLAAEERFE*IPLLSTLGSMG Trigger: CCCCATACTGCCCAACGTGGAGAGCAGAGGTATCCATTCGAAGCGCTCTTCCGCAGCCAGCACTATGCCCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
||
| CDS GCA 72 bp | TGTCGGTTACGAAGTCGGATGTTCATGGCCCCCGACTaGTCCTGCAGGGTTCGGATCTCAGAGCTGATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CRLRSRMFMAPD*SCRVRISELME Trigger: CTCCATCAGCTCTGAGATCCGAACCCTGCAGGAGCAGTCGGGGGCCATGAACATCCGACTTCGTAACCGACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
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| CDS GCA 72 bp | CAGCCCATCCACAAGTTCCCCAAGTTTCCCCCGAACTaGCTGTCGGTTACGAAGTCGGATGTTCATGGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: QPIHKFPKFPPN*LSVTKSDVHGP Trigger: GGGGCCATGAACATCCGACTTCGTAACCGACAGGCAGTTCGGGGGAAACTTGGGGAACTTGTGGATGGGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
||
| CDS GCA 72 bp | TGCTGGCTGCGGAAGAGCGCTTCGAATGGATACCTCTaGTCTCCACGTTGGGCAGTATGGGGCACTAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: CWLRKSASNGYL*SPRWAVWGTRM Trigger: CATCCTAGTGCCCCATACTGCCCAACGTGGAGAGCAGAGGTATCCATTCGAAGCGCTCTTCCGCAGCCAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
||
| CDS GCA 72 bp | GAGCGTGCGGCCCATGACGGCGTGGAACAGGTCATGTaGAGCCGGGCCAGACACGATGAAAAATTCACAGAT | + |
|
Preference number: 6 (lower is better) Translates to: ERAAHDGVEQVM*SRARHDEKFTD Trigger: ATCTGTGAATTTTTCATCGTGTCTGGCCCGGCTGCACATGACCTGTTCCACGCCGTCATGGGCCGCACGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
||
| CDS CAA 72 bp | ACCTGGAGCTGTCCCAGGAGCTGCAGCGTGCGTTCATaGGGGATCGTCTGGTTGATGCTGACAAGTGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TWSCPRSCSVRS*GIVWLMLTSAE Trigger: CTCTGCACTTGTCAGCATCAACCAGACGATCCCCAATGAACGCACGCTGCAGCTCCTGGGACAGCTCCAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS CAA 72 bp | CGAGCATTGAGCAGCTGCTGGAAACTTTCCACCTCTTaGCTGTCATCAGCAGCCCGCTCCATCAGCACCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RALSSCWKLSTS*LSSAARSISTP Trigger: CGGGGTGCTGATGGAGCGGGCTGCTGATGACAGCAAAGAGGTGGAAAGTTTCCAGCAGCTGCTCAATGCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
||
| CDS CAA 90 bp | TCCTGTGTCCGAGCATTGAGCAGCTGCTGGAAACTTTCCACCTCTTaGCTGTCATCAGCAGCCCGCTCCATCAGCACCCCGAGCATCATG | + |
|
Preference number: 6 (lower is better) Translates to: SCVRALSSCWKLSTS*LSSAARSISTPSIM Trigger: CATGATGCTCGGGGTGCTGATGGAGCGGGCTGCTGATGACAGCAAAGAGGTGGAAAGTTTCCAGCAGCTGCTCAATGCTCGGACACAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
||
| CDS TCA 72 bp | CCAGGAACCTGGGCTCCAGGACGGCGTCACAGGCCGTaGTCTGATTGTGCAGAGACGCTATGTTTTCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: PGTWAPGRRHRP*SDCAETLCFHS Trigger: AGAGTGAAAACATAGCGTCTCTGCACAATCAGATCACGGCCTGTGACGCCGTCCTGGAGCCCAGGTTCCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173196.3 |
||
| CDS GCA 72 bp | TTACGAAGTCGGATGTTCATGGCCCCCGACTGCTCCTaGAGGGTTCGGATCTCAGAGCTGATGGAGCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LRSRMFMAPDCS*RVRISELMELR Trigger: TCTCAGCTCCATCAGCTCTGAGATCCGAACCCTGCAGGAGCAGTCGGGGGCCATGAACATCCGACTTCGTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025178.17 |
||
| CDS GCA 72 bp | CACGGCAAGAATTGTCGAGGAGGGCATAGTGCTGGCTaGGGAAGAGCGCTTCGAATGGATACCTCTGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: HGKNCRGGHSAG*GRALRMDTSAL Trigger: GAGAGCAGAGGTATCCATTCGAAGCGCTCTTCCGCAGCCAGCACTATGCCCTCCTCGACAATTCTTGCCGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
||
| CDS GCA 72 bp | CCAGTACCTGTCCAGGGCAGGGACGTCCCTCTTCGCTaGAATGTTGCGGAACCGGAGAACAATGTGGATACA | + |
|
Preference number: 6 (lower is better) Translates to: PVPVQGRDVPLR*NVAEPENNVDT Trigger: TGTATCCACATTGTTCTCCGGTTCCGCAACATTGCAGCGAAGAGGGACGTCCCTGCCCTGGACAGGTACTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
||
| CDS CAA 72 bp | CTGTCCAGGGCAGGGACGTCCCTCTTCGCTGCAATGTaGCGGAACCGGAGAACAATGTGGATACAGAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: LSRAGTSLFAAM*RNRRTMWIQRK Trigger: TTTTCTCTGTATCCACATTGTTCTCCGGTTCCGCAACATTGCAGCGAAGAGGGACGTCCCTGCCCTGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
||
| CDS CAA 90 bp | TCCCAGTACCTGTCCAGGGCAGGGACGTCCCTCTTCGCTGCAATGTaGCGGAACCGGAGAACAATGTGGATACAGAGAAAAACAGCAATG | + |
|
Preference number: 6 (lower is better) Translates to: SQYLSRAGTSLFAAM*RNRRTMWIQRKTAM Trigger: CATTGCTGTTTTTCTCTGTATCCACATTGTTCTCCGGTTCCGCAACATTGCAGCGAAGAGGGACGTCCCTGCCCTGGACAGGTACTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS TCA 72 bp | CGTCTTTCTCAGCAACTTCCTCGTACTGCACTTTCATaGGCCGCCCCACATAGGATCGGTAGTAGGACAGGT | + |
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Preference number: 6 (lower is better) Translates to: RLSQQLPRTALS*AAPHRIGSRTG Trigger: ACCTGTCCTACTACCGATCCTATGTGGGGCGGCTCATGAAAGTGCAGTACGAGGAAGTTGCTGAGAAAGACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS GCA 72 bp | TGTCCAGGGCAGGGACGTCCCTCTTCGCTGCAATGTTaGGGAACCGGAGAACAATGTGGATACAGAGAAAAA | + |
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Preference number: 6 (lower is better) Translates to: CPGQGRPSSLQC*GTGEQCGYREK Trigger: TTTTTCTCTGTATCCACATTGTTCTCCGGTTCCGCAACATTGCAGCGAAGAGGGACGTCCCTGCCCTGGACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS TCA 72 bp | GCTCCATCAGCACCCCGAGCATCATGTCATAGTTGTTaGTCAGAAACACAAGCTGCTCCTTCCTGGAGGAGA | + |
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Preference number: 6 (lower is better) Translates to: APSAPRASCHSC*SETQAAPSWRR Trigger: TCTCCTCCAGGAAGGAGCAGCTTGTGTTTCTGATCAACAACTATGACATGATGCTCGGGGTGCTGATGGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS GCA 72 bp | GCGTTCATTGGGGATCGTCTGGTTGATGCTGACAAGTaGAGAGGAGAACTCAGCATAGCGGCGTGTGATATA | + |
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Preference number: 6 (lower is better) Translates to: AFIGDRLVDADK*RGELSIAACDI Trigger: TATATCACACGCCGCTATGCTGAGTTCTCCTCTGCACTTGTCAGCATCAACCAGACGATCCCCAATGAACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS CCA 72 bp | TCAATGAACTCCTGTGTCCGAGCATTGAGCAGCTGCTaGAAACTTTCCACCTCTTTGCTGTCATCAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: SMNSCVRALSSC*KLSTSLLSSAA Trigger: GGCTGCTGATGACAGCAAAGAGGTGGAAAGTTTCCAGCAGCTGCTCAATGCTCGGACACAGGAGTTCATTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS TCA 72 bp | CGCTATGTTTTCACTCTCTTGGATATAGTCCCGGATTaGCTTCTGCTCAATCTGCTGCAGCTCCAGCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: RYVFTLLDIVPD*LLLNLLQLQLH Trigger: GTGGAGCTGGAGCTGCAGCAGATTGAGCAGAAGTCAATCCGGGACTATATCCAAGAGAGTGAAAACATAGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS TCA 72 bp | AAAACTTCGCATTACATCCTGACTCAGGGACTCCACTaGTGCCTTCCAGGAACTACCAAAGCCACGGATCAG | + |
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Preference number: 6 (lower is better) Translates to: KTSHYILTQGLH*CLPGTTKATDQ Trigger: CTGATCCGTGGCTTTGGTAGTTCCTGGAAGGCATCAGTGGAGTCCCTGAGTCAGGATGTAATGCGAAGTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS GCA 72 bp | TCCTCAATGAACTCCTGTGTCCGAGCATTGAGCAGCTaGTGGAAACTTTCCACCTCTTTGCTGTCATCAGCA | + |
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Preference number: 6 (lower is better) Translates to: SSMNSCVRALSS*WKLSTSLLSSA Trigger: TGCTGATGACAGCAAAGAGGTGGAAAGTTTCCAGCAGCTGCTCAATGCTCGGACACAGGAGTTCATTGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS CCA 72 bp | ACCGGAGAACAATGTGGATACAGAGAAAAACAGCAATaGCATCGTAGCAGTCAGCCAGGTAGGACTCCAGGT | + |
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Preference number: 6 (lower is better) Translates to: TGEQCGYREKQQ*HRSSQPGRTPG Trigger: ACCTGGAGTCCTACCTGGCTGACTGCTACGATGCCATTGCTGTTTTTCTCTGTATCCACATTGTTCTCCGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS CAA 72 bp | ACGCTATGTTTTCACTCTCTTGGATATAGTCCCGGATaGACTTCTGCTCAATCTGCTGCAGCTCCAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: TLCFHSLGYSPG*TSAQSAAAPAP Trigger: TGGAGCTGGAGCTGCAGCAGATTGAGCAGAAGTCAATCCGGGACTATATCCAAGAGAGTGAAAACATAGCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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| CDS TCA 72 bp | CCATTTCGGAAGTTGGTAAAACTTCGCATTACATCCTaGCTCAGGGACTCCACTGATGCCTTCCAGGAACTA | + |
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Preference number: 6 (lower is better) Translates to: PFRKLVKLRITS*LRDSTDAFQEL Trigger: TAGTTCCTGGAAGGCATCAGTGGAGTCCCTGAGTCAGGATGTAATGCGAAGTTTTACCAACTTCCGAAATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025178.17 ENSMUST00000173196.3 |
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