Pregenerated sensors for VPS50 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001376Ensembl transcript IDs: ENSMUST00000001412.17, ENSMUST00000164052.5, ENSMUST00000170873.10
Found 302 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGAAGAGGGTGCTGGATCCTTTGGATCTGAGTTACAGATGTTTGTaGGGTACCACGTATATGCTCAGAGTCAGGCCCGAAAGAGCAACA | + |
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Preference number: 1 (lower is better) Translates to: QKRVLDPLDLSYRCL*GTTYMLRVRPERAT Trigger: TGTTGCTCTTTCGGGCCTGACTCTGAGCATATACGTGGTACCTCACAAACATCTGTAACTCAGATCCAAAGGATCCAGCACCCTCTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| 3UTR GCA 90 bp | CTCAAAGTTTTCTTAGAAGAGAATTATGAGGAGTGTATGAAGAACTaGCTTTCATGTCGTACAGGCCGAAAGAAGATCAATGTCCCCGAG | + |
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Preference number: 1 (lower is better) Translates to: LKVFLEENYEECMKN*LSCRTGRKKINVPE Trigger: CTCGGGGACATTGATCTTCTTTCGGCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTCTTCTAAGAAAACTTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
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| 3UTR GCA 90 bp | AGGCAAACATTCACCAGGTTGGTCAACTGCTTCGTTGAGTATTCCTaGCCAAAGAAAGAAAATCCAAATGTAACCTACAATGCACTAGAA | + |
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Preference number: 1 (lower is better) Translates to: RQTFTRLVNCFVEYS*PKKENPNVTYNALE Trigger: TTCTAGTGCATTGTAGGTTACATTTGGATTTTCTTTCTTTGGGCAGGAATACTCAACGAAGCAGTTGACCAACCTGGTGAATGTTTGCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| 3UTR-3UTR GCA 90 bp | CACTGTCCAGATCTCCAGTTTATGTGTTTCAACAGTGCACTGCTAGGATGGGCAAAATGGTTTCAGGTATaGACCTGGCAAAGAATTCCT | + |
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Preference number: 2 (lower is better) Translates to: HCPDLQFMCFNSALLGWAKWFQV*TWQRIP Trigger: AGGAATTCTTTGCCAGGTGCATACCTGAAACCATTT...TGCCCATCCTAGCAGTGCACTGTTGAAACACATAAACTGGAGATCTGGACAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCTTACTCCACTCCACTTGTTTTGATATAAACTGTGTTAGTCTCTTTCTAGGGCTCAAATGGACCTaGCTAGACAAAGGACATTGC | + |
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Preference number: 2 (lower is better) Translates to: SALLHSTCFDINCVSLFLGLKWT*LDKGHC Trigger: GCAATGTCCTTTGTCTAGTCAGGTCCATTTGAGCCC...TAGAAAGAGACTAACACAGTTTATATCAAAACAAGTGGAGTGGAGTAAGGCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
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| 3UTR-3UTR TCA 90 bp | AGATCAGAGCAGATGCTCCCTGCTAGAAATGTTTGTGTATGTGTTCAATTAAGCATTCTAGGACACACTTaGAAAGGGCTCAAATGGACC | + |
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Preference number: 2 (lower is better) Translates to: RSEQMLPARNVCVCVQLSILGHT*KGLKWT Trigger: GGTCCATTTGAGCCCTTTTCAAGTGTGTCCTAGAAT...GCTTAATTGAACACATACACAAACATTTCTAGCAGGGAGCATCTGCTCTGATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
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| 3UTR-3UTR TCA 90 bp | TACAGGCCGAAAGAAGATCAATGTCCCCGAGGAAAGAGCTCTGTTCATTATCTTGTCTTGCTTTCTTATTaGTATGAGATCCTAGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: YRPKEDQCPRGKSSVHYLVLLSY*YEILGK Trigger: TTTGCCTAGGATCTCATATCAATAAGAAAGCAAGAC...AAGATAATGAACAGAGCTCTTTCCTCGGGGACATTGATCTTCTTTCGGCCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| 3UTR-3UTR TCA 90 bp | GTGATTTCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACAGTTAGTCTCTTTCTATaGTGCAGCACAGGAAAATCA | + |
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Preference number: 2 (lower is better) Translates to: VISPPPTSWFLHFDLFETVSLFL*CSTGKS Trigger: TGATTTTCCTGTGCTGCATCATAGAAAGAGACTAAC...TGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGAAATCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
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| 3UTR-3UTR TCA 90 bp | TATCCAGAAGATCAGAGCAGATGCTCCCTGCTAGAAATGTTTGTGTATGTGTTCGATGTTACCACTGCATaGTTTAAGAGTACAACACTT | + |
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Preference number: 2 (lower is better) Translates to: YPEDQSRCSLLEMFVYVFDVTTA*FKSTTL Trigger: AAGTGTTGTACTCTTAAATCATGCAGTGGTAACATC...GAACACATACACAAACATTTCTAGCAGGGAGCATCTGCTCTGATCTTCTGGATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
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| 3UTR-3UTR TCA 90 bp | AATAAATGTGTATGTACTCCACATGTGCTTGCTGTCTGTAGAGTTCAGAAGAGGAAAGTCTACGTGCACTaGAGGTATTGTAAAGACAAT | + |
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Preference number: 2 (lower is better) Translates to: NKCVCTPHVLAVCRVQKRKVYVH*RYCKDN Trigger: ATTGTCTTTACAATACCTTCAGTGCACGTAGACTTT...CCTCTTCTGAACTCTACAGACAGCAAGCACATGTGGAGTACATACACATTTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| 3UTR-3UTR TCA 90 bp | GTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAGTTAAAAACAGAGAACATCTTAGAAGAGAATTATaGGGAGTGTATGAAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: VIAKLTLAEALTVKNREHLRREL*GVYEEL Trigger: CAGTTCTTCATACACTCCTCATAATTCTCTTCTAAG...ATGTTCTCTGTTTTTAACTGTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
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| 3UTR-3UTR TCA 90 bp | GAAACTGGAGCATATAAAAGTCACTTGAGAACACCACACACAGTTGAGTATTTTGCTTTCTTATTGATATaGGATCCTAGGCAAACATTC | + |
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Preference number: 2 (lower is better) Translates to: ETGAYKSHLRTPHTVEYFAFLLI*DPRQTF Trigger: GAATGTTTGCCTAGGATCTCATATCAATAAGAAAGC...AAAATACTCAACTGTGTGTGGTGTTCTCAAGTGACTTTTATATGCTCCAGTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| 3UTR-3UTR TCA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAACTTAGAAGAGAATTATaGGGAGTGTATGAAGAACTG | + |
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Preference number: 2 (lower is better) Translates to: LIIRKYCTFILPFKTLSKLRREL*GVYEEL Trigger: CAGTTCTTCATACACTCCTCATAATTCTCTTCTAAG...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
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| 3UTR TCA 72 bp | GTGCTGGATCCTTTGGATCTGAGTTACAGATGTTTGTaGGGTACCACGTATATGCTCAGAGTCAGGCCCGAA | + |
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Preference number: 3 (lower is better) Translates to: VLDPLDLSYRCL*GTTYMLRVRPE Trigger: TTCGGGCCTGACTCTGAGCATATACGTGGTACCTCACAAACATCTGTAACTCAGATCCAAAGGATCCAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| 3UTR-3UTR CAA 90 bp | CTGTCCAGATCTCCAGTTTATGTGTTTCAACAGTGCACTGCTAGGATGGGCATAAAGCTTCCGGCTTTTTaGTCTGCAAAGAACTGGCAG | + |
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Preference number: 3 (lower is better) Translates to: LSRSPVYVFQQCTARMGIKLPAF*SAKNWQ Trigger: CTGCCAGTTCTTTGCAGACAAAAAAGCCGGAAGCTT...TATGCCCATCCTAGCAGTGCACTGTTGAAACACATAAACTGGAGATCTGGACAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| 3UTR-3UTR CAA 90 bp | CTGCCCCTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCGATTCTAGGACACACTaGAAAAGGGCTCAAATGGAC | + |
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Preference number: 3 (lower is better) Translates to: LPLNLDHSCLTAGDFNILDSRTH*KRAQMD Trigger: GTCCATTTGAGCCCTTTTCAAGTGTGTCCTAGAATC...GAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAGGGGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
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| 3UTR GCA 72 bp | TCACTGTCCAGATCTCCAGTTTATGTGTTTCAACAGTaGACTGCTAGGATGGGCATAGGCAGTTCCTCAGAA | + |
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Preference number: 3 (lower is better) Translates to: SLSRSPVYVFQQ*TARMGIGSSSE Trigger: TTCTGAGGAACTGCCTATGCCCATCCTAGCAGTGCACTGTTGAAACACATAAACTGGAGATCTGGACAGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| 3UTR TCA 72 bp | GCTGCTAGGAGCTTCTGTCTTGCTTTCTTATTGATATaGGATCCTAGGCAAACATTCACCAGGTTGGTCAAC | + |
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Preference number: 3 (lower is better) Translates to: AARSFCLAFLLI*DPRQTFTRLVN Trigger: GTTGACCAACCTGGTGAATGTTTGCCTAGGATCTCATATCAATAAGAAAGCAAGACAGAAGCTCCTAGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| 3UTR GCA 72 bp | ACTTTGCCTTTAATAAATGTGTATGTACTCCACATGTaGTTGCTGTCTGTAGAGTTCAGAAGAGGGTGCTGG | + |
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Preference number: 3 (lower is better) Translates to: TLPLINVYVLHM*LLSVEFRRGCW Trigger: CCAGCACCCTCTTCTGAACTCTACAGACAGCAAGCACATGTGGAGTACATACACATTTATTAAAGGCAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| 3UTR TCA 72 bp | CAAAGAACTGGCAGGGAATTCCCTGGGAATTGTCATTaGACTACAAATACTAGCCAGCTAAAGCTTCTAAAA | + |
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Preference number: 3 (lower is better) Translates to: QRTGREFPGNCH*TTNTSQLKLLK Trigger: TTTTAGAAGCTTTAGCTGGCTAGTATTTGTAGTTCAATGACAATTCCCAGGGAATTCCCTGCCAGTTCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| 3UTR GCA 72 bp | TTCTTAGAAGAGAATTATGAGGAGTGTATGAAGAACTaGCTTTCATGTCGTACAGGCCGAAAGAAGATCAAT | + |
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Preference number: 3 (lower is better) Translates to: FLEENYEECMKN*LSCRTGRKKIN Trigger: ATTGATCTTCTTTCGGCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTCTTCTAAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
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| 3UTR GCA 72 bp | TTTCCTCAAACTGTTTATCCAGAAGATCAGAGCAGATaGTCCCTGCTAGAAATGTTTGTGTATGTGTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: FPQTVYPEDQSR*SLLEMFVYVFN Trigger: ATTGAACACATACACAAACATTTCTAGCAGGGAGCATCTGCTCTGATCTTCTGGATAAACAGTTTGAGGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
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| CDS-3UTR CCA 90 bp | GAGCCCTGTGGCCCAATGAGAGTGCTGGAAGGCACAGGAGAAGCATGTAAGGCAAGCTTGAGGGTCGCTTaGCTGTTCTCGAAGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: EPCGPMRVLEGTGEACKASLRVA*LFSKLP Trigger: AGGGAGCTTCGAGAACAGCCAAGCGACCCTCAAGCT...TGCCTTACATGCTTCTCCTGTGCCTTCCAGCACTCTCATTGGGCCACAGGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| CDS-3UTR CCA 90 bp | AGACATCTAAGGCTGGCACGGGCTGAGCCCTGTGGCCCAATGAGAGTGCTGGAACAGCTGAATAGCTCCTaGATAGTCCTCTTCCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RHLRLARAEPCGPMRVLEQLNSS*IVLFLQ Trigger: CTGGAGGAAGAGGACTATCCAGGAGCTATTCAGCTG...TTCCAGCACTCTCATTGGGCCACAGGGCTCAGCCCGTGCCAGCCTTAGATGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| CDS-3UTR TCA 90 bp | AGACATCTAAGGCTGGCACGGGCTGAGCCCTGTGGCCCAATGAGAGTGCTGGAAGCATCCAAATGTGGCTaGAGGAACTCAAACTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RHLRLARAEPCGPMRVLEASKCG*RNSNCS Trigger: TGAGCAGTTTGAGTTCCTTCAGCCACATTTGGATGC...TTCCAGCACTCTCATTGGGCCACAGGGCTCAGCCCGTGCCAGCCTTAGATGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| CDS-3UTR GCA 90 bp | GAGCCCTGTGGCCCAATGAGAGTGCTGGAAGGCACAGGAGAAGCATGTAAGGCATCCAGTAAATGGGCTTaGGCAGTTCACTGGCAGTTG | + |
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Preference number: 4 (lower is better) Translates to: EPCGPMRVLEGTGEACKASSKWA*AVHWQL Trigger: CAACTGCCAGTGAACTGCGCAAGCCCATTTACTGGA...TGCCTTACATGCTTCTCCTGTGCCTTCCAGCACTCTCATTGGGCCACAGGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| CDS-3UTR CCA 90 bp | GAGCCCTGTGGCCCAATGAGAGTGCTGGAAGGCACAGGAGAAGCATGTAAGGCACAGGTCTGCCAGGCATaGAATATAGCTGTCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: EPCGPMRVLEGTGEACKAQVCQA*NIAVWC Trigger: ACACCAGACAGCTATATTCCATGCCTGGCAGACCTG...TGCCTTACATGCTTCTCCTGTGCCTTCCAGCACTCTCATTGGGCCACAGGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| CDS-3UTR TCA 90 bp | GAGCCCTGTGGCCCAATGAGAGTGCTGGAAGGCACAGGAGAAGCATGTAAGGCAAGGCCTAAGCTAGCCTaGGTAAAACCTTCCTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: EPCGPMRVLEGTGEACKARPKLA*VKPSFA Trigger: TGCAAAGGAAGGTTTTACTCAGGCTAGCTTAGGCCT...TGCCTTACATGCTTCTCCTGTGCCTTCCAGCACTCTCATTGGGCCACAGGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| CDS-3UTR GCA 90 bp | GAGCCCTGTGGCCCAATGAGAGTGCTGGAAGGCACAGGAGAAGCATGTAAGGCAGAAGGGCTTTTTGACTaGAGGCATCACAGCATCCAA | + |
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Preference number: 4 (lower is better) Translates to: EPCGPMRVLEGTGEACKAEGLFD*RHHSIQ Trigger: TTGGATGCTGTGATGCCTGCAGTCAAAAAGCCCTTC...TGCCTTACATGCTTCTCCTGTGCCTTCCAGCACTCTCATTGGGCCACAGGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| CDS-3UTR GCA 90 bp | CACTGTCCAGATCTCCAGTTTATGTGTTTCAACAGTGCACTGCTAGGATGGGCACATGACTTCCCACAGTaGTTTGCACAGGTCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: HCPDLQFMCFNSALLGWAHDFPQ*FAQVCQ Trigger: CTGGCAGACCTGTGCAAAGCACTGTGGGAAGTCATG...TGCCCATCCTAGCAGTGCACTGTTGAAACACATAAACTGGAGATCTGGACAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| CDS-3UTR GCA 90 bp | AGACATCTAAGGCTGGCACGGGCTGAGCCCTGTGGCCCAATGAGAGTGCTGGAAGCAAAACTTCAGACTTaGTACCACAAAATTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: RHLRLARAEPCGPMRVLEAKLQT*YHKILL Trigger: GAGAAGAATTTTGTGGTAGCAAGTCTGAAGTTTTGC...TTCCAGCACTCTCATTGGGCCACAGGGCTCAGCCCGTGCCAGCCTTAGATGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| CDS-3UTR GCA 90 bp | CACTGTCCAGATCTCCAGTTTATGTGTTTCAACAGTGCACTGCTAGGATGGGCACTTTCTTTCCTCGGCTaGTGTGAGAGTGGCAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: HCPDLQFMCFNSALLGWALSFLG*CESGSW Trigger: CCAACTGCCACTCTCACAGCAGCCGAGGAAAGAAAG...TGCCCATCCTAGCAGTGCACTGTTGAAACACATAAACTGGAGATCTGGACAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| CDS-3UTR CCA 90 bp | CCCCTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCCATAGCTTGAGGGTCGCTTaGCTGTTCTCGAAGCTCCCT | + |
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Preference number: 4 (lower is better) Translates to: PLNLDHSCLTAGDFNILHSLRVA*LFSKLP Trigger: AGGGAGCTTCGAGAACAGCCAAGCGACCCTCAAGCT...ATGGAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
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| CDS-3UTR CCA 90 bp | GGCAGCAACACTCTGTCAATGACAAAGCAACACAATGTGCTGCTCATTGCGTTAGCTTGCGCAGTTCACTaGCAGTTGAGACTGTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: GSNTLSMTKQHNVLLIALACAVH*QLRLSG Trigger: CCCAGACAGTCTCAACTGCCAGTGAACTGCGCAAGC...TAACGCAATGAGCAGCACATTGTGTTGCTTTGTCATTGACAGAGTGTTGCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| CDS-3UTR CCA 90 bp | CCCCTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCCATGCTTGCGCAGTTCACTaGCAGTTGAGACTGTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: PLNLDHSCLTAGDFNILHACAVH*QLRLSG Trigger: CCCAGACAGTCTCAACTGCCAGTGAACTGCGCAAGC...ATGGAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
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| CDS-3UTR TCA 90 bp | CTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCCATGTTAGGCACCAAGATCATTaGGGCTCTCCGGAGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LNLDHSCLTAGDFNILHVRHQDH*GSPEGS Trigger: AGAGCCCTCCGGAGAGCCTCAATGATCTTGGTGCCT...AACATGGAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
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| CDS-3UTR CCA 90 bp | AGACATCTAAGGCTGGCACGGGCTGAGCCCTGTGGCCCAATGAGAGTGCTGGAATTTGCAATGTTTTTATaGTTCTCAGCGACTTCAGAA | + |
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Preference number: 4 (lower is better) Translates to: RHLRLARAEPCGPMRVLEFAMFL*FSATSE Trigger: TTCTGAAGTCGCTGAGAACCATAAAAACATTGCAAA...TTCCAGCACTCTCATTGGGCCACAGGGCTCAGCCCGTGCCAGCCTTAGATGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| CDS-3UTR CCA 90 bp | GAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCCGAAAGGCTTGCGCAGTTCACTaGCAGTTGAGACTGTCTGGG | + |
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Preference number: 4 (lower is better) Translates to: ENYEECMKNCLSCRTGRKACAVH*QLRLSG Trigger: CCCAGACAGTCTCAACTGCCAGTGAACTGCGCAAGC...CTTTCGGCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
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| 3UTR CAA 72 bp | TGCTCTGGTGAGTTGTTAGAGAAGCTTCCGGCTTTTTaGTCTGCAAAGAACTGGCAGGGAATTCCCTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: CSGELLEKLPAF*SAKNWQGIPWE Trigger: TTCCCAGGGAATTCCCTGCCAGTTCTTTGCAGACAAAAAAGCCGGAAGCTTCTCTAACAACTCACCAGAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| 3UTR CAA 72 bp | CTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTaGAGACAAACAGCTCTTCCGCAGCTCAAGCTAGCC | + |
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Preference number: 4 (lower is better) Translates to: LPQLVGSFILIC*RQTALPQLKLA Trigger: GGCTAGCTTGAGCTGCGGAAGAGCTGTTTGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
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| CDS-3UTR TCA 90 bp | TTAGAAGAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCAGGCACCAAGATCATTaGGGCTCTCCGGAGGGCTCT | + |
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Preference number: 4 (lower is better) Translates to: LEENYEECMKNCLSCRTGRHQDH*GSPEGS Trigger: AGAGCCCTCCGGAGAGCCTCAATGATCTTGGTGCCT...GCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTCTTCTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
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| CDS-3UTR TCA 90 bp | GAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCCGAAAGGTTCTCGAAGCTCCCTaGATTCCTCCTTTCCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: ENYEECMKNCLSCRTGRKVLEAP*IPPFQG Trigger: TCCCTGGAAAGGAGGAATTCAGGGAGCTTCGAGAAC...CTTTCGGCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
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| CDS-3UTR TCA 90 bp | GGCAGGCAGCAACACTCTGTCAATGACAAAGCAACACAATGTGCTGCTCATTGCCTAACTCTTGCAGATTaGGAACAGGAGGAAGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GRQQHSVNDKATQCAAHCLTLAD*EQEEAS Trigger: AGAAGCTTCCTCCTGTTCTCAATCTGCAAGAGTTAG...GCAATGAGCAGCACATTGTGTTGCTTTGTCATTGACAGAGTGTTGCTGCCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| CDS-3UTR TCA 90 bp | CCCCTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCCATATGACAGCAGCCAACTaGAGACCTGTCTGCAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: PLNLDHSCLTAGDFNILHMTAAN*RPVCSD Trigger: ATCACTGCAGACAGGTCTTCAGTTGGCTGCTGTCAT...ATGGAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
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| CDS-3UTR GCA 90 bp | TCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACAAACAGCCATGACTTCCCACAGTaGTTTGCACAGGTCTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: SPPPTSWFLHFDLFETNSHDFPQ*FAQVCQ Trigger: CTGGCAGACCTGTGCAAAGCACTGTGGGAAGTCATG...GCTGTTTGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
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| CDS-3UTR GCA 90 bp | GGCAGGCAGCAACACTCTGTCAATGACAAAGCAACACAATGTGCTGCTCATTGCATGGATTCCCACCACTaGAGTACTGCTCAAACAAAG | + |
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Preference number: 4 (lower is better) Translates to: GRQQHSVNDKATQCAAHCMDSHH*STAQTK Trigger: CTTTGTTTGAGCAGTACTGCAGTGGTGGGAATCCAT...GCAATGAGCAGCACATTGTGTTGCTTTGTCATTGACAGAGTGTTGCTGCCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| CDS-3UTR GCA 90 bp | TACAGGCCGAAAGAAGATCAATGTCCCCGAGGAAAGAGCTCTGTTCATTATCTTAATCCGACTTCTTCCTaGTCTTCAGGGTCTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: YRPKEDQCPRGKSSVHYLNPTSS*SSGSLG Trigger: CCCGAGAGACCCTGAAGAGCAGGAAGAAGTCGGATT...AAGATAATGAACAGAGCTCTTTCCTCGGGGACATTGATCTTCTTTCGGCCTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR CCA 90 bp | CCCCTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCCATCAGCTGAATAGCTCCTaGATAGTCCTCTTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLNLDHSCLTAGDFNILHQLNSS*IVLFLQ Trigger: CTGGAGGAAGAGGACTATCCAGGAGCTATTCAGCTG...ATGGAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGCAACACTCTGTCAATGACAAAGCAACACAATGTGCTGCTCATTGCGTTACCACAATCCAGTAAATaGGCTTGCGCAGTTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSNTLSMTKQHNVLLIALPQSSK*ACAVHW Trigger: CCAGTGAACTGCGCAAGCCCATTTACTGGATTGTGG...TAACGCAATGAGCAGCACATTGTGTTGCTTTGTCATTGACAGAGTGTTGCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | GAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCCGAAAGATGACAGCAGCCAACTaGAGACCTGTCTGCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ENYEECMKNCLSCRTGRKMTAAN*RPVCSD Trigger: ATCACTGCAGACAGGTCTTCAGTTGGCTGCTGTCAT...CTTTCGGCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | TCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACAAACAGCAAATCACTAGCTGATTaGGGTGTGGGCTGGGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: SPPPTSWFLHFDLFETNSKSLAD*GVGWVP Trigger: AGGTACCCAGCCCACACCTCAATCAGCTAGTGATTT...GCTGTTTGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR GCA 90 bp | CCCCTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCCATGAAGGGCTTTTTGACTaGAGGCATCACAGCATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PLNLDHSCLTAGDFNILHEGLFD*RHHSIQ Trigger: TTGGATGCTGTGATGCCTGCAGTCAAAAAGCCCTTC...ATGGAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAGGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR GCA 90 bp | TCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACAAACAGCTCCAGTAAATGGGCTTaGGCAGTTCACTGGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPPTSWFLHFDLFETNSSSKWA*AVHWQL Trigger: CAACTGCCAGTGAACTGCGCAAGCCCATTTACTGGA...GCTGTTTGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CCA 90 bp | AGGCAAACATTCACCAGGTTGGTCAACTGCTTCGTTGAGTATTCCTGCCCAAAGTGGAATATAGCTGTCTaGTGTCACATGCGTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQTFTRLVNCFVEYSCPKWNIAV*CHMRTE Trigger: CTCTGTACGCATGTGACACCAGACAGCTATATTCCA...CTTTGGGCAGGAATACTCAACGAAGCAGTTGACCAACCTGGTGAATGTTTGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR CCA 90 bp | TCTAGGACACACTTGAAAAGGGCTCAAATGGACCTGACTAGACAAAGGACATTGCCACAATCCAGTAAATaGGCTTGCGCAGTTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRTHLKRAQMDLTRQRTLPQSSK*ACAVHW Trigger: CCAGTGAACTGCGCAAGCCCATTTACTGGATTGTGG...CAATGTCCTTTGTCTAGTCAGGTCCATTTGAGCCCTTTTCAAGTGTGTCCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR TCA 90 bp | GGCAGCAACACTCTGTCAATGACAAAGCAACACAATGTGCTGCTCATTGCGTTAAAGACCTGTCTGCAGTaGTGTGACTCTTTCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSNTLSMTKQHNVLLIALKTCLQ*CDSFKF Trigger: GAACTTGAAAGAGTCACATCACTGCAGACAGGTCTT...TAACGCAATGAGCAGCACATTGTGTTGCTTTGTCATTGACAGAGTGTTGCTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | GAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCCGAAAGAGGCCTAAGCTAGCCTaGGTAAAACCTTCCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ENYEECMKNCLSCRTGRKRPKLA*VKPSFA Trigger: TGCAAAGGAAGGTTTTACTCAGGCTAGCTTAGGCCT...CTTTCGGCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | GGCAGGCAGCAACACTCTGTCAATGACAAAGCAACACAATGTGCTGCTCATTGCCAAGATGCTAAAATTTaGCTTAACAGGGCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRQQHSVNDKATQCAAHCQDAKI*LNRAKL Trigger: GAGCTTTGCCCTGTTAAGTCAAATTTTAGCATCTTG...GCAATGAGCAGCACATTGTGTTGCTTTGTCATTGACAGAGTGTTGCTGCCTGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | CACTGTCCAGATCTCCAGTTTATGTGTTTCAACAGTGCACTGCTAGGATGGGCACATTACTGCATTTCTTaGCATTGGCGTATCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HCPDLQFMCFNSALLGWAHYCIS*HWRILP Trigger: TGGAAGGATACGCCAATGTCAAGAAATGCAGTAATG...TGCCCATCCTAGCAGTGCACTGTTGAAACACATAAACTGGAGATCTGGACAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | TCTAGGACACACTTGAAAAGGGCTCAAATGGACCTGACTAGACAAAGGACATTGTTACCCTGTGCTCTTTaGTCCAACGCTCCATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SRTHLKRAQMDLTRQRTLLPCAL*SNAPCH Trigger: ATGACATGGAGCGTTGGATCAAAGAGCACAGGGTAA...CAATGTCCTTTGTCTAGTCAGGTCCATTTGAGCCCTTTTCAAGTGTGTCCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR GCA 90 bp | TTTCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACAAACACTTTCTTTCCTCGGCTaGTGTGAGAGTGGCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLLPQLVGSFILICLRQTLSFLG*CESGSW Trigger: CCAACTGCCACTCTCACAGCAGCCGAGGAAAGAAAG...TGTTTGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CCA 90 bp | GTGATTTCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACACAGGTCTGCCAGGCATaGAATATAGCTGTCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VISPPPTSWFLHFDLFETQVCQA*NIAVWC Trigger: ACACCAGACAGCTATATTCCATGCCTGGCAGACCTG...TGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGAAATCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CCA 90 bp | GAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCCGAAAGACACTAAGGATTCTGTaGCTACCACTCTCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ENYEECMKNCLSCRTGRKTLRIL*LPLSLP Trigger: TGGCAGAGAGAGTGGTAGCCACAGAATCCTTAGTGT...CTTTCGGCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAAAGGCACCAAGATCATTaGGGCTCTCCGGAGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIIRKYCTFILPFKTLSKRHQDH*GSPEGS Trigger: AGAGCCCTCCGGAGAGCCTCAATGATCTTGGTGCCT...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | CCCCTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCCATCTGTCTGCAGTGATGTaGCTCTTTCAAGTTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: PLNLDHSCLTAGDFNILHLSAVM*LFQVPL Trigger: TAAAGGAACTTGAAAGAGTCACATCACTGCAGACAG...ATGGAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR TCA 90 bp | TACAGGCCGAAAGAAGATCAATGTCCCCGAGGAAAGAGCTCTGTTCATTATCTTAAATCCTGTGCTCTTTaGTCCAACGCTCCATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: YRPKEDQCPRGKSSVHYLKSCAL*SNAPCH Trigger: ATGACATGGAGCGTTGGATCAAAGAGCACAGGATTT...AAGATAATGAACAGAGCTCTTTCCTCGGGGACATTGATCTTCTTTCGGCCTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | GTGATTTCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACACAGTACTCATCACATTaGTTCCTTCAGCAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VISPPPTSWFLHFDLFETQYSSH*FLQQLQ Trigger: CTGCAGCTGCTGAAGGAAGCAATGTGATGAGTACTG...TGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGAAATCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR GCA 90 bp | TTAGAAGAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCCCACCACTGCAGTACTaGTCAAACAAAGTCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LEENYEECMKNCLSCRTGPPLQY*SNKVTG Trigger: GCCTGTGACTTTGTTTGAGCAGTACTGCAGTGGTGG...GCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTCTTCTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | AGATCAGAGCAGATGCTCCCTGCTAGAAATGTTTGTGTATGTGTTCAATTAAGCCCACCACTGCAGTACTaGTCAAACAAAGTCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSEQMLPARNVCVCVQLSPPLQY*SNKVTG Trigger: GCCTGTGACTTTGTTTGAGCAGTACTGCAGTGGTGG...GCTTAATTGAACACATACACAAACATTTCTAGCAGGGAGCATCTGCTCTGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CCA 90 bp | CATTCATCCTCCCATTTAAGACACTCTCCAAAAACTATTCATAGACACATTAGCAGCTTGAGGGTCGCTTaGCTGTTCTCGAAGCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: HSSSHLRHSPKTIHRHISSLRVA*LFSKLP Trigger: AGGGAGCTTCGAGAACAGCCAAGCGACCCTCAAGCT...GCTAATGTGTCTATGAATAGTTTTTGGAGAGTGTCTTAAATGGGAGGATGAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CCA 90 bp | TCTAGGACACACTTGAAAAGGGCTCAAATGGACCTGACTAGACAAAGGACATTGTGGAATATAGCTGTCTaGTGTCACATGCGTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SRTHLKRAQMDLTRQRTLWNIAV*CHMRTE Trigger: CTCTGTACGCATGTGACACCAGACAGCTATATTCCA...CAATGTCCTTTGTCTAGTCAGGTCCATTTGAGCCCTTTTCAAGTGTGTCCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CCA 90 bp | CCCCTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCCATCACATCGAAGGCGATTaGCTTAAGGATGTTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: PLNLDHSCLTAGDFNILHHIEGD*LKDVHH Trigger: ATGATGAACATCCTTAAGCCAATCGCCTTCGATGTG...ATGGAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR TCA 90 bp | GTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAGTTAAAAACAGAGAACATGTTCTCGAAGCTCCCTaGATTCCTCCTTTCCAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VIAKLTLAEALTVKNREHVLEAP*IPPFQG Trigger: TCCCTGGAAAGGAGGAATTCAGGGAGCTTCGAGAAC...ATGTTCTCTGTTTTTAACTGTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | CATTCATCCTCCCATTTAAGACACTCTCCAAAAACTATTCATAGACACATTAGCAACTCTTGCTCAGCTTaGGGGTCGCTTGGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSSSHLRHSPKTIHRHISNSCSA*GSLGCS Trigger: AGAACAGCCAAGCGACCCTCAAGCTGAGCAAGAGTT...GCTAATGTGTCTATGAATAGTTTTTGGAGAGTGTCTTAAATGGGAGGATGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | GTCTCTTTCTATGATGCAGCACAGGAAAATCAAACTCATATTCTGATTCTAGGAAACTCTTGCTCAGCTTaGGGGTCGCTTGGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSFYDAAQENQTHILILGNSCSA*GSLGCS Trigger: AGAACAGCCAAGCGACCCTCAAGCTGAGCAAGAGTT...TCCTAGAATCAGAATATGAGTTTGATTTTCCTGTGCTGCATCATAGAAAGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR TCA 90 bp | TATCCAGAAGATCAGAGCAGATGCTCCCTGCTAGAAATGTTTGTGTATGTGTTCCTAACTCTTGCAGATTaGGAACAGGAGGAAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YPEDQSRCSLLEMFVYVFLTLAD*EQEEAS Trigger: AGAAGCTTCCTCCTGTTCTCAATCTGCAAGAGTTAG...GAACACATACACAAACATTTCTAGCAGGGAGCATCTGCTCTGATCTTCTGGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR TCA 90 bp | CCCCTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCCATATAGATGTTGTGCTGTaGCATGATCTCTTTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: PLNLDHSCLTAGDFNILHIDVVL*HDLFDI Trigger: GATGTCAAAGAGATCATGTCACAGCACAACATCTAT...ATGGAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAGGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR GCA 90 bp | GGCAGGCAGCAACACTCTGTCAATGACAAAGCAACACAATGTGCTGCTCATTGCCGTATGTCAGTTCTTTaGAATGTTTTTATGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRQQHSVNDKATQCAAHCRMSVL*NVFMVL Trigger: GAGAACCATAAAAACATTGCAAAGAACTGACATACG...GCAATGAGCAGCACATTGTGTTGCTTTGTCATTGACAGAGTGTTGCTGCCTGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | TCTAGGACACACTTGAAAAGGGCTCAAATGGACCTGACTAGACAAAGGACATTGCTGTCTGGTGTCACATaGGTACAGAGATCTTTATAC | + |
|
Preference number: 4 (lower is better) Translates to: SRTHLKRAQMDLTRQRTLLSGVT*VQRSLY Trigger: GTATAAAGATCTCTGTACGCATGTGACACCAGACAG...CAATGTCCTTTGTCTAGTCAGGTCCATTTGAGCCCTTTTCAAGTGTGTCCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR GCA 90 bp | CATTCATCCTCCCATTTAAGACACTCTCCAAAAACTATTCATAGACACATTAGCAATCCGACTTCTTCCTaGTCTTCAGGGTCTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HSSSHLRHSPKTIHRHISNPTSS*SSGSLG Trigger: CCCGAGAGACCCTGAAGAGCAGGAAGAAGTCGGATT...GCTAATGTGTCTATGAATAGTTTTTGGAGAGTGTCTTAAATGGGAGGATGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | TCAGCCTTACTCCACTCCACTTGTTTTGATATAAACTGTGTTAGTCTCTTTCTAAATCCGACTTCTTCCTaGTCTTCAGGGTCTCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SALLHSTCFDINCVSLFLNPTSS*SSGSLG Trigger: CCCGAGAGACCCTGAAGAGCAGGAAGAAGTCGGATT...TAGAAAGAGACTAACACAGTTTATATCAAAACAAGTGGAGTGGAGTAAGGCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR GCA 90 bp | GTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAGTTAAAAACAGAGAACATCTTTCTTTCCTCGGCTaGTGTGAGAGTGGCAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VIAKLTLAEALTVKNREHLSFLG*CESGSW Trigger: CCAACTGCCACTCTCACAGCAGCCGAGGAAAGAAAG...ATGTTCTCTGTTTTTAACTGTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| 3UTR CAA 72 bp | TTGCCTTTAATAAATGTGTATGTACTCCACATGTGCTaGCTGTCTGTAGAGTTCAGAAGAGGGTGCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: LPLINVYVLHMC*LSVEFRRGCWI Trigger: GATCCAGCACCCTCTTCTGAACTCTACAGACAGCAAGCACATGTGGAGTACATACACATTTATTAAAGGCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAAAACTCTTGCTCAGCTTaGGGGTCGCTTGGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LIIRKYCTFILPFKTLSKNSCSA*GSLGCS Trigger: AGAACAGCCAAGCGACCCTCAAGCTGAGCAAGAGTT...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | ATAAAATGTCATCCGACCAGACGTTTCAAGATAGAGAACAAGGGTGAGGACATACTAACTCTTGCAGATTaGGAACAGGAGGAAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKCHPTRRFKIENKGEDILTLAD*EQEEAS Trigger: AGAAGCTTCCTCCTGTTCTCAATCTGCAAGAGTTAG...TATGTCCTCACCCTTGTTCTCTATCTTGAAACGTCTGGTCGGATGACATTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001412.17 |
||
| CDS-3UTR TCA 90 bp | GTGATTTCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACACTTGCATCAACCTGCTaGCAATATCCAGAACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VISPPPTSWFLHFDLFETLASTC*QYPEQR Trigger: TCTTTGTTCTGGATATTGTCAGCAGGTTGATGCAAG...TGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGAAATCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR TCA 90 bp | GAAACTGGAGCATATAAAAGTCACTTGAGAACACCACACACAGTTGAGTATTTTAAATCACTAGCTGATTaGGGTGTGGGCTGGGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: ETGAYKSHLRTPHTVEYFKSLAD*GVGWVP Trigger: AGGTACCCAGCCCACACCTCAATCAGCTAGTGATTT...AAAATACTCAACTGTGTGTGGTGTTCTCAAGTGACTTTTATATGCTCCAGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | GTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAGTTAAAAACAGAGAACATAAATCACTAGCTGATTaGGGTGTGGGCTGGGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: VIAKLTLAEALTVKNREHKSLAD*GVGWVP Trigger: AGGTACCCAGCCCACACCTCAATCAGCTAGTGATTT...ATGTTCTCTGTTTTTAACTGTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | TATCCAGAAGATCAGAGCAGATGCTCCCTGCTAGAAATGTTTGTGTATGTGTTCCATTACTGCATTTCTTaGCATTGGCGTATCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: YPEDQSRCSLLEMFVYVFHYCIS*HWRILP Trigger: TGGAAGGATACGCCAATGTCAAGAAATGCAGTAATG...GAACACATACACAAACATTTCTAGCAGGGAGCATCTGCTCTGATCTTCTGGATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR GCA 90 bp | GTGATTTCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACATACTCCTCTAACTCTTaGAGATTGAGAACAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VISPPPTSWFLHFDLFETYSSNS*RLRTGG Trigger: TCCTCCTGTTCTCAATCTGCAAGAGTTAGAGGAGTA...TGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGAAATCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR GCA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAACATGACTTCCCACAGTaGTTTGCACAGGTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LIIRKYCTFILPFKTLSKHDFPQ*FAQVCQ Trigger: CTGGCAGACCTGTGCAAAGCACTGTGGGAAGTCATG...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | CCCCTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCCATGCAAAACTTCAGACTTaGTACCACAAAATTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLNLDHSCLTAGDFNILHAKLQT*YHKILL Trigger: GAGAAGAATTTTGTGGTAGCAAGTCTGAAGTTTTGC...ATGGAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR GCA 90 bp | TTCATCATTTATGATCACTGTTATAGCCAAATTAACACTGGCAGAAGCTCTGACCCACCACTGCAGTACTaGTCAAACAAAGTCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FIIYDHCYSQINTGRSSDPPLQY*SNKVTG Trigger: GCCTGTGACTTTGTTTGAGCAGTACTGCAGTGGTGG...GTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAACAGTGATCATAAATGATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | ATAAAATGTCATCCGACCAGACGTTTCAAGATAGAGAACAAGGGTGAGGACATAATGGATTCCCACCACTaGAGTACTGCTCAAACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IKCHPTRRFKIENKGEDIMDSHH*STAQTK Trigger: CTTTGTTTGAGCAGTACTGCAGTGGTGGGAATCCAT...TATGTCCTCACCCTTGTTCTCTATCTTGAAACGTCTGGTCGGATGACATTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001412.17 |
||
| CDS-3UTR GCA 90 bp | GAAACTGGAGCATATAAAAGTCACTTGAGAACACCACACACAGTTGAGTATTTTTCCAGTAAATGGGCTTaGGCAGTTCACTGGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: ETGAYKSHLRTPHTVEYFSSKWA*AVHWQL Trigger: CAACTGCCAGTGAACTGCGCAAGCCCATTTACTGGA...AAAATACTCAACTGTGTGTGGTGTTCTCAAGTGACTTTTATATGCTCCAGTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAAATGACAGCAGCCAACTaGAGACCTGTCTGCAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LIIRKYCTFILPFKTLSKMTAAN*RPVCSD Trigger: ATCACTGCAGACAGGTCTTCAGTTGGCTGCTGTCAT...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | TCAGCCTTACTCCACTCCACTTGTTTTGATATAAACTGTGTTAGTCTCTTTCTAAGGCCTAAGCTAGCCTaGGTAAAACCTTCCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SALLHSTCFDINCVSLFLRPKLA*VKPSFA Trigger: TGCAAAGGAAGGTTTTACTCAGGCTAGCTTAGGCCT...TAGAAAGAGACTAACACAGTTTATATCAAAACAAGTGGAGTGGAGTAAGGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR TCA 90 bp | CTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCCATGTTCAAGATGCTAAAATTTaGCTTAACAGGGCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNLDHSCLTAGDFNILHVQDAKI*LNRAKL Trigger: GAGCTTTGCCCTGTTAAGTCAAATTTTAGCATCTTG...AACATGGAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR TCA 90 bp | GTCTCTTTCTATGATGCAGCACAGGAAAATCAAACTCATATTCTGATTCTAGGAGCATCCAAATGTGGCTaGAGGAACTCAAACTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSFYDAAQENQTHILILGASKCG*RNSNCS Trigger: TGAGCAGTTTGAGTTCCTTCAGCCACATTTGGATGC...TCCTAGAATCAGAATATGAGTTTGATTTTCCTGTGCTGCATCATAGAAAGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR TCA 90 bp | ATAAAATGTCATCCGACCAGACGTTTCAAGATAGAGAACAAGGGTGAGGACATACATTACTGCATTTCTTaGCATTGGCGTATCCTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: IKCHPTRRFKIENKGEDIHYCIS*HWRILP Trigger: TGGAAGGATACGCCAATGTCAAGAAATGCAGTAATG...TATGTCCTCACCCTTGTTCTCTATCTTGAAACGTCTGGTCGGATGACATTTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001412.17 |
||
| CDS-3UTR TCA 90 bp | GAAACTGGAGCATATAAAAGTCACTTGAGAACACCACACACAGTTGAGTATTTTATTCCCTGTGCTCTTTaGTCCAACGCTCCATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: ETGAYKSHLRTPHTVEYFIPCAL*SNAPCH Trigger: ATGACATGGAGCGTTGGATCAAAGAGCACAGGGAAT...AAAATACTCAACTGTGTGTGGTGTTCTCAAGTGACTTTTATATGCTCCAGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000001412.17 |
||
| CDS-3UTR GCA 90 bp | CATAGACACATTAGCCACTATCCCTTCCAACTATGTATTTATAGTACACTCTTTGCTTCCTTCAGCAGCTaGAGCTGTTTCCTCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HRHISHYPFQLCIYSTLFASFSS*SCFLIV Trigger: GACAATGAGGAAACAGCTGCAGCTGCTGAAGGAAGC...AAAGAGTGTACTATAAATACATAGTTGGAAGGGATAGTGGCTAATGTGTCTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | CAGGTGACTTTAATATTCTCCATGTTTTCCTCAAACTGTTTATCCAGAAGATCAGCTTCCTTCAGCAGCTaGAGCTGTTTCCTCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QVTLIFSMFSSNCLSRRSASFSS*SCFLIV Trigger: GACAATGAGGAAACAGCTGCAGCTGCTGAAGGAAGC...TGATCTTCTGGATAAACAGTTTGAGGAAAACATGGAGAATATTAAAGTCACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR GCA 90 bp | GAAACTGGAGCATATAAAAGTCACTTGAGAACACCACACACAGTTGAGTATTTTCAGTACTCATCACATTaGTTCCTTCAGCAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ETGAYKSHLRTPHTVEYFQYSSH*FLQQLQ Trigger: CTGCAGCTGCTGAAGGAAGCAATGTGATGAGTACTG...AAAATACTCAACTGTGTGTGGTGTTCTCAAGTGACTTTTATATGCTCCAGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | TACAGGCCGAAAGAAGATCAATGTCCCCGAGGAAAGAGCTCTGTTCATTATCTTAATTCTTCTCCAACTTaGATCAACCTGCTGACAATA | + |
|
Preference number: 4 (lower is better) Translates to: YRPKEDQCPRGKSSVHYLNSSPT*INLLTI Trigger: TATTGTCAGCAGGTTGATGCAAGTTGGAGAAGAATT...AAGATAATGAACAGAGCTCTTTCCTCGGGGACATTGATCTTCTTTCGGCCTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | TACAGGCCGAAAGAAGATCAATGTCCCCGAGGAAAGAGCTCTGTTCATTATCTTTTTCTAATGGACTCCTaGAAAACTTCAGACTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: YRPKEDQCPRGKSSVHYLFLMDS*KTSDLL Trigger: TAGCAAGTCTGAAGTTTTGCAGGAGTCCATTAGAAA...AAGATAATGAACAGAGCTCTTTCCTCGGGGACATTGATCTTCTTTCGGCCTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | TTAGAAGAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCGAAGTTGCTGATGGCTaGTTACTAGGTGAAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LEENYEECMKNCLSCRTGEVADG*LLGETD Trigger: ATCAGTTTCACCTAGTAAGCAGCCATCAGCAACTTC...GCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTCTTCTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | GTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAGTTAAAAACAGAGAACATGAAGGGCTTTTTGACTaGAGGCATCACAGCATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VIAKLTLAEALTVKNREHEGLFD*RHHSIQ Trigger: TTGGATGCTGTGATGCCTGCAGTCAAAAAGCCCTTC...ATGTTCTCTGTTTTTAACTGTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CCA 90 bp | CATAGACACATTAGCCACTATCCCTTCCAACTATGTATTTATAGTACACTCTTTCAGCTGAATAGCTCCTaGATAGTCCTCTTCCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRHISHYPFQLCIYSTLFQLNSS*IVLFLQ Trigger: CTGGAGGAAGAGGACTATCCAGGAGCTATTCAGCTG...AAAGAGTGTACTATAAATACATAGTTGGAAGGGATAGTGGCTAATGTGTCTATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CCA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAACAGGTCTGCCAGGCATaGAATATAGCTGTCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LIIRKYCTFILPFKTLSKQVCQA*NIAVWC Trigger: ACACCAGACAGCTATATTCCATGCCTGGCAGACCTG...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CCA 90 bp | GTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAGTTAAAAACAGAGAACATACACTAAGGATTCTGTaGCTACCACTCTCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VIAKLTLAEALTVKNREHTLRIL*LPLSLP Trigger: TGGCAGAGAGAGTGGTAGCCACAGAATCCTTAGTGT...ATGTTCTCTGTTTTTAACTGTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCCTTACTCCACTCCACTTGTTTTGATATAAACTGTGTTAGTCTCTTTCTAACACTAAGGATTCTGTaGCTACCACTCTCTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SALLHSTCFDINCVSLFLTLRIL*LPLSLP Trigger: TGGCAGAGAGAGTGGTAGCCACAGAATCCTTAGTGT...TAGAAAGAGACTAACACAGTTTATATCAAAACAAGTGGAGTGGAGTAAGGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CCA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAACCACAATCCAGTAAATaGGCTTGCGCAGTTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: LIIRKYCTFILPFKTLSKPQSSK*ACAVHW Trigger: CCAGTGAACTGCGCAAGCCCATTTACTGGATTGTGG...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | GTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAGTTAAAAACAGAGAACATAAGACCTGTCTGCAGTaGTGTGACTCTTTCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VIAKLTLAEALTVKNREHKTCLQ*CDSFKF Trigger: GAACTTGAAAGAGTCACATCACTGCAGACAGGTCTT...ATGTTCTCTGTTTTTAACTGTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | TCAGCCTTACTCCACTCCACTTGTTTTGATATAAACTGTGTTAGTCTCTTTCTAAAGACCTGTCTGCAGTaGTGTGACTCTTTCAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SALLHSTCFDINCVSLFLKTCLQ*CDSFKF Trigger: GAACTTGAAAGAGTCACATCACTGCAGACAGGTCTT...TAGAAAGAGACTAACACAGTTTATATCAAAACAAGTGGAGTGGAGTAAGGCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR TCA 90 bp | CATAGACACATTAGCCACTATCCCTTCCAACTATGTATTTATAGTACACTCTTTGCATCCAAATGTGGCTaGAGGAACTCAAACTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HRHISHYPFQLCIYSTLFASKCG*RNSNCS Trigger: TGAGCAGTTTGAGTTCCTTCAGCCACATTTGGATGC...AAAGAGTGTACTATAAATACATAGTTGGAAGGGATAGTGGCTAATGTGTCTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | TTAGAAGAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCATAGATGTTGTGCTGTaGCATGATCTCTTTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: LEENYEECMKNCLSCRTGIDVVL*HDLFDI Trigger: GATGTCAAAGAGATCATGTCACAGCACAACATCTAT...GCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTCTTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | GAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCCGAAAGACTGCAGATTGTTGTTaGTTTAATTTGTCTCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: ENYEECMKNCLSCRTGRKTADCC*FNLSLY Trigger: GTACAGAGACAAATTAAAGCAACAACAATCTGCAGT...CTTTCGGCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | AATAAATGTGTATGTACTCCACATGTGCTTGCTGTCTGTAGAGTTCAGAAGAGGTGCTCCAAAGTATCTTaGAGCTTTGAATTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NKCVCTPHVLAVCRVQKRCSKVS*SFEFSS Trigger: TGAGCTGAATTCAAAGCTGCAAGATACTTTGGAGCA...CCTCTTCTGAACTCTACAGACAGCAAGCACATGTGGAGTACATACACATTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | CATAGACACATTAGCCACTATCCCTTCCAACTATGTATTTATAGTACACTCTTTCAGTACTCATCACATTaGTTCCTTCAGCAGCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRHISHYPFQLCIYSTLFQYSSH*FLQQLQ Trigger: CTGCAGCTGCTGAAGGAAGCAATGTGATGAGTACTG...AAAGAGTGTACTATAAATACATAGTTGGAAGGGATAGTGGCTAATGTGTCTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | TCCAGAAGATCAGAGCAGATGCTCCCTGCTAGAAATGTTTGTGTATGTGTTCAAAATTCTTCTCCAACTTaGATCAACCTGCTGACAATA | + |
|
Preference number: 4 (lower is better) Translates to: SRRSEQMLPARNVCVCVQNSSPT*INLLTI Trigger: TATTGTCAGCAGGTTGATGCAAGTTGGAGAAGAATT...TTGAACACATACACAAACATTTCTAGCAGGGAGCATCTGCTCTGATCTTCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR GCA 90 bp | TCCAGAAGATCAGAGCAGATGCTCCCTGCTAGAAATGTTTGTGTATGTGTTCAATTTCTAATGGACTCCTaGAAAACTTCAGACTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: SRRSEQMLPARNVCVCVQFLMDS*KTSDLL Trigger: TAGCAAGTCTGAAGTTTTGCAGGAGTCCATTAGAAA...TTGAACACATACACAAACATTTCTAGCAGGGAGCATCTGCTCTGATCTTCTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR GCA 90 bp | GTCTCTTTCTATGATGCAGCACAGGAAAATCAAACTCATATTCTGATTCTAGGAATGGATTCCCACCACTaGAGTACTGCTCAAACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSFYDAAQENQTHILILGMDSHH*STAQTK Trigger: CTTTGTTTGAGCAGTACTGCAGTGGTGGGAATCCAT...TCCTAGAATCAGAATATGAGTTTGATTTTCCTGTGCTGCATCATAGAAAGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR GCA 90 bp | TTAGAAGAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCAGGATGTTCATCATCTaGATGTACTTTCCAACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LEENYEECMKNCLSCRTGRMFII*MYFPTS Trigger: GCTTGTTGGAAAGTACATGCAGATGATGAACATCCT...GCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTCTTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | GTGATTTCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACAAACCGCTTGTTAAACTaGTCAAATTCCTTCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: VISPPPTSWFLHFDLFETNRLLN*SNSFSN Trigger: ATTGCTGAAGGAATTTGAGCAGTTTAACAAGCGGTT...TGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGAAATCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CCA 90 bp | TTCATCATTTATGATCACTGTTATAGCCAAATTAACACTGGCAGAAGCTCTGACTGGAATATAGCTGTCTaGTGTCACATGCGTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FIIYDHCYSQINTGRSSDWNIAV*CHMRTE Trigger: CTCTGTACGCATGTGACACCAGACAGCTATATTCCA...GTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAACAGTGATCATAAATGATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| 3UTR CAA 72 bp | GGAAAATCAAACTCATATTCTGATTCTAGGACACACTaGAAAAGGGCTCAAATGGACCTGACTAGACAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKSNSYSDSRTH*KRAQMDLTRQR Trigger: CCTTTGTCTAGTCAGGTCCATTTGAGCCCTTTTCAAGTGTGTCCTAGAATCAGAATATGAGTTTGATTTTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR TCA 90 bp | GTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAGTTAAAAACAGAGAACATCTGTCTGCAGTGATGTaGCTCTTTCAAGTTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: VIAKLTLAEALTVKNREHLSAVM*LFQVPL Trigger: TAAAGGAACTTGAAAGAGTCACATCACTGCAGACAG...ATGTTCTCTGTTTTTAACTGTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | CATTCATCCTCCCATTTAAGACACTCTCCAAAAACTATTCATAGACACATTAGCCTTGCATCAACCTGCTaGCAATATCCAGAACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HSSSHLRHSPKTIHRHISLASTC*QYPEQR Trigger: TCTTTGTTCTGGATATTGTCAGCAGGTTGATGCAAG...GCTAATGTGTCTATGAATAGTTTTTGGAGAGTGTCTTAAATGGGAGGATGAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | GAAACTGGAGCATATAAAAGTCACTTGAGAACACCACACACAGTTGAGTATTTTCTTGCATCAACCTGCTaGCAATATCCAGAACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ETGAYKSHLRTPHTVEYFLASTC*QYPEQR Trigger: TCTTTGTTCTGGATATTGTCAGCAGGTTGATGCAAG...AAAATACTCAACTGTGTGTGGTGTTCTCAAGTGACTTTTATATGCTCCAGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | GAAACTGGAGCATATAAAAGTCACTTGAGAACACCACACACAGTTGAGTATTTTTACTCCTCTAACTCTTaGAGATTGAGAACAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ETGAYKSHLRTPHTVEYFYSSNS*RLRTGG Trigger: TCCTCCTGTTCTCAATCTGCAAGAGTTAGAGGAGTA...AAAATACTCAACTGTGTGTGGTGTTCTCAAGTGACTTTTATATGCTCCAGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | TTCATCATTTATGATCACTGTTATAGCCAAATTAACACTGGCAGAAGCTCTGACTACTCCTCTAACTCTTaGAGATTGAGAACAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FIIYDHCYSQINTGRSSDYSSNS*RLRTGG Trigger: TCCTCCTGTTCTCAATCTGCAAGAGTTAGAGGAGTA...GTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAACAGTGATCATAAATGATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | AACTGTGTGCCTTCACCTTGTAAGAGAAAAGAAAGTCTACGTGCACTGAAGGTAACTGCAGATTGTTGTTaGTTTAATTTGTCTCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: NCVPSPCKRKESLRALKVTADCC*FNLSLY Trigger: GTACAGAGACAAATTAAAGCAACAACAATCTGCAGT...TACCTTCAGTGCACGTAGACTTTCTTTTCTCTTACAAGGTGAAGGCACACAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | GAAACTGGAGCATATAAAAGTCACTTGAGAACACCACACACAGTTGAGTATTTTCTGTCTGGTGTCACATaGGTACAGAGATCTTTATAC | + |
|
Preference number: 4 (lower is better) Translates to: ETGAYKSHLRTPHTVEYFLSGVT*VQRSLY Trigger: GTATAAAGATCTCTGTACGCATGTGACACCAGACAG...AAAATACTCAACTGTGTGTGGTGTTCTCAAGTGACTTTTATATGCTCCAGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | ATAAAATGTCATCCGACCAGACGTTTCAAGATAGAGAACAAGGGTGAGGACATAAATTCTTCTCCAACTTaGATCAACCTGCTGACAATA | + |
|
Preference number: 4 (lower is better) Translates to: IKCHPTRRFKIENKGEDINSSPT*INLLTI Trigger: TATTGTCAGCAGGTTGATGCAAGTTGGAGAAGAATT...TATGTCCTCACCCTTGTTCTCTATCTTGAAACGTCTGGTCGGATGACATTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001412.17 |
||
| CDS-3UTR GCA 90 bp | GTCTCTTTCTATGATGCAGCACAGGAAAATCAAACTCATATTCTGATTCTAGGAGAAGTTGCTGATGGCTaGTTACTAGGTGAAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSFYDAAQENQTHILILGEVADG*LLGETD Trigger: ATCAGTTTCACCTAGTAAGCAGCCATCAGCAACTTC...TCCTAGAATCAGAATATGAGTTTGATTTTCCTGTGCTGCATCATAGAAAGAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR GCA 90 bp | ATAAAATGTCATCCGACCAGACGTTTCAAGATAGAGAACAAGGGTGAGGACATAAACCGCTTGTTAAACTaGTCAAATTCCTTCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: IKCHPTRRFKIENKGEDINRLLN*SNSFSN Trigger: ATTGCTGAAGGAATTTGAGCAGTTTAACAAGCGGTT...TATGTCCTCACCCTTGTTCTCTATCTTGAAACGTCTGGTCGGATGACATTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001412.17 |
||
| CDS-3UTR CCA 90 bp | TTCATCATTTATGATCACTGTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAAACATTCACCAGGTTaGTCAACTGCTTCGTTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FIIYDHCYSQINTGRSSDKHSPG*STASLS Trigger: ACTCAACGAAGCAGTTGACCAACCTGGTGAATGTTT...GTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAACAGTGATCATAAATGATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001412.17 |
||
| CDS-3UTR TCA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAACTGTCTGCAGTGATGTaGCTCTTTCAAGTTCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LIIRKYCTFILPFKTLSKLSAVM*LFQVPL Trigger: TAAAGGAACTTGAAAGAGTCACATCACTGCAGACAG...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAATGTGAATGGCTTGAGTaGAGTGCATATGAAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LIIRKYCTFILPFKTLSKCEWLE*SAYEAD Trigger: ATCAGCTTCATATGCACTTCACTCAAGCCATTCACA...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | CAGGTGACTTTAATATTCTCCATGTTTTCCTCAAACTGTTTATCCAGAAGATCATGTGAATGGCTTGAGTaGAGTGCATATGAAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QVTLIFSMFSSNCLSRRSCEWLE*SAYEAD Trigger: ATCAGCTTCATATGCACTTCACTCAAGCCATTCACA...TGATCTTCTGGATAAACAGTTTGAGGAAAACATGGAGAATATTAAAGTCACCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR TCA 90 bp | GTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAGTTAAAAACAGAGAACATCAAGATGCTAAAATTTaGCTTAACAGGGCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VIAKLTLAEALTVKNREHQDAKI*LNRAKL Trigger: GAGCTTTGCCCTGTTAAGTCAAATTTTAGCATCTTG...ATGTTCTCTGTTTTTAACTGTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | TTCATCATTTATGATCACTGTTATAGCCAAATTAACACTGGCAGAAGCTCTGACATAGATGTTGTGCTGTaGCATGATCTCTTTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: FIIYDHCYSQINTGRSSDIDVVL*HDLFDI Trigger: GATGTCAAAGAGATCATGTCACAGCACAACATCTAT...GTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAACAGTGATCATAAATGATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | GTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAGTTAAAAACAGAGAACATTGCTCCAAAGTATCTTaGAGCTTTGAATTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VIAKLTLAEALTVKNREHCSKVS*SFEFSS Trigger: TGAGCTGAATTCAAAGCTGCAAGATACTTTGGAGCA...ATGTTCTCTGTTTTTAACTGTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | GTCTCTTTCTATGATGCAGCACAGGAAAATCAAACTCATATTCTGATTCTAGGATGCTCCAAAGTATCTTaGAGCTTTGAATTCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSFYDAAQENQTHILILGCSKVS*SFEFSS Trigger: TGAGCTGAATTCAAAGCTGCAAGATACTTTGGAGCA...TCCTAGAATCAGAATATGAGTTTGATTTTCCTGTGCTGCATCATAGAAAGAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR GCA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAACTGTCTGGTGTCACATaGGTACAGAGATCTTTATAC | + |
|
Preference number: 4 (lower is better) Translates to: LIIRKYCTFILPFKTLSKLSGVT*VQRSLY Trigger: GTATAAAGATCTCTGTACGCATGTGACACCAGACAG...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | CATAGACACATTAGCCACTATCCCTTCCAACTATGTATTTATAGTACACTCTTTGAAGTTGCTGATGGCTaGTTACTAGGTGAAACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HRHISHYPFQLCIYSTLFEVADG*LLGETD Trigger: ATCAGTTTCACCTAGTAAGCAGCCATCAGCAACTTC...AAAGAGTGTACTATAAATACATAGTTGGAAGGGATAGTGGCTAATGTGTCTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
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| CDS-3UTR CCA 90 bp | TTAGAAGAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCGTTTCTTCATCTTTGTaGTCGGCTTGTATTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LEENYEECMKNCLSCRTGVSSSL*SACISN Trigger: ATTTGAAATACAAGCCGACCACAAAGATGAAGAAAC...GCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTCTTCTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CCA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAACACATCGAAGGCGATTaGCTTAAGGATGTTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: LIIRKYCTFILPFKTLSKHIEGD*LKDVHH Trigger: ATGATGAACATCCTTAAGCCAATCGCCTTCGATGTG...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
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| CDS-3UTR CCA 90 bp | CATAGACACATTAGCCACTATCCCTTCCAACTATGTATTTATAGTACACTCTTTCACATCGAAGGCGATTaGCTTAAGGATGTTCATCAT | + |
|
Preference number: 4 (lower is better) Translates to: HRHISHYPFQLCIYSTLFHIEGD*LKDVHH Trigger: ATGATGAACATCCTTAAGCCAATCGCCTTCGATGTG...AAAGAGTGTACTATAAATACATAGTTGGAAGGGATAGTGGCTAATGTGTCTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR TCA 90 bp | TTCATCATTTATGATCACTGTTATAGCCAAATTAACACTGGCAGAAGCTCTGACGTCTTGCTTTCTTATTaGTATGAGATCCTAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FIIYDHCYSQINTGRSSDVLLSY*YEILGK Trigger: TTTGCCTAGGATCTCATATCAATAAGAAAGCAAGAC...GTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAACAGTGATCATAAATGATGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001412.17 |
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| CDS-3UTR GCA 90 bp | TTCATCATTTATGATCACTGTTATAGCCAAATTAACACTGGCAGAAGCTCTGACGCAAAACTTCAGACTTaGTACCACAAAATTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FIIYDHCYSQINTGRSSDAKLQT*YHKILL Trigger: GAGAAGAATTTTGTGGTAGCAAGTCTGAAGTTTTGC...GTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAACAGTGATCATAAATGATGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR GCA 90 bp | GAAACTGGAGCATATAAAAGTCACTTGAGAACACCACACACAGTTGAGTATTTTTTTCTAATGGACTCCTaGAAAACTTCAGACTTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ETGAYKSHLRTPHTVEYFFLMDS*KTSDLL Trigger: TAGCAAGTCTGAAGTTTTGCAGGAGTCCATTAGAAA...AAAATACTCAACTGTGTGTGGTGTTCTCAAGTGACTTTTATATGCTCCAGTTTC 37% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
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| CDS-3UTR GCA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAAAGGATGTTCATCATCTaGATGTACTTTCCAACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LIIRKYCTFILPFKTLSKRMFII*MYFPTS Trigger: GCTTGTTGGAAAGTACATGCAGATGATGAACATCCT...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
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| CDS-3UTR GCA 90 bp | CAGGTGACTTTAATATTCTCCATGTTTTCCTCAAACTGTTTATCCAGAAGATCAAGGATGTTCATCATCTaGATGTACTTTCCAACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QVTLIFSMFSSNCLSRRSRMFII*MYFPTS Trigger: GCTTGTTGGAAAGTACATGCAGATGATGAACATCCT...TGATCTTCTGGATAAACAGTTTGAGGAAAACATGGAGAATATTAAAGTCACCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
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| CDS-3UTR GCA 90 bp | CATTCATCCTCCCATTTAAGACACTCTCCAAAAACTATTCATAGACACATTAGCAACCGCTTGTTAAACTaGTCAAATTCCTTCAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: HSSSHLRHSPKTIHRHISNRLLN*SNSFSN Trigger: ATTGCTGAAGGAATTTGAGCAGTTTAACAAGCGGTT...GCTAATGTGTCTATGAATAGTTTTTGGAGAGTGTCTTAAATGGGAGGATGAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
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| CDS-3UTR TCA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAAGCTTTCTTATTGATATaGGATCCTAGGCAAACATTC | + |
|
Preference number: 4 (lower is better) Translates to: LIIRKYCTFILPFKTLSKAFLLI*DPRQTF Trigger: GAATGTTTGCCTAGGATCTCATATCAATAAGAAAGC...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001412.17 |
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| CDS-3UTR GCA 90 bp | GTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAGTTAAAAACAGAGAACATCGTATGTCAGTTCTTTaGAATGTTTTTATGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VIAKLTLAEALTVKNREHRMSVL*NVFMVL Trigger: GAGAACCATAAAAACATTGCAAAGAACTGACATACG...ATGTTCTCTGTTTTTAACTGTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
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| CDS-3UTR GCA 90 bp | CAGGTGACTTTAATATTCTCCATGTTTTCCTCAAACTGTTTATCCAGAAGATCACGTATGTCAGTTCTTTaGAATGTTTTTATGGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QVTLIFSMFSSNCLSRRSRMSVL*NVFMVL Trigger: GAGAACCATAAAAACATTGCAAAGAACTGACATACG...TGATCTTCTGGATAAACAGTTTGAGGAAAACATGGAGAATATTAAAGTCACCTG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
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| CDS-3UTR CCA 90 bp | CATAGACACATTAGCCACTATCCCTTCCAACTATGTATTTATAGTACACTCTTTTTTGCAATGTTTTTATaGTTCTCAGCGACTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HRHISHYPFQLCIYSTLFFAMFL*FSATSE Trigger: TTCTGAAGTCGCTGAGAACCATAAAAACATTGCAAA...AAAGAGTGTACTATAAATACATAGTTGGAAGGGATAGTGGCTAATGTGTCTATG 34% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
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| CDS-3UTR CCA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAAGTTTCTTCATCTTTGTaGTCGGCTTGTATTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LIIRKYCTFILPFKTLSKVSSSL*SACISN Trigger: ATTTGAAATACAAGCCGACCACAAAGATGAAGAAAC...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
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| CDS-3UTR CCA 90 bp | CAGGTGACTTTAATATTCTCCATGTTTTCCTCAAACTGTTTATCCAGAAGATCAGTTTCTTCATCTTTGTaGTCGGCTTGTATTTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QVTLIFSMFSSNCLSRRSVSSSL*SACISN Trigger: ATTTGAAATACAAGCCGACCACAAAGATGAAGAAAC...TGATCTTCTGGATAAACAGTTTGAGGAAAACATGGAGAATATTAAAGTCACCTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
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| CDS-3UTR CAA 90 bp | GAGCCCTGTGGCCCAATGAGAGTGCTGGAAGGCACAGGAGAAGCATGTAAGGCAAAGGCACCAAGATCATaGAGGCTCTCCGGAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: EPCGPMRVLEGTGEACKAKAPRS*RLSGGL Trigger: GAGCCCTCCGGAGAGCCTCAATGATCTTGGTGCCTT...TGCCTTACATGCTTCTCCTGTGCCTTCCAGCACTCTCATTGGGCCACAGGGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
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| CDS GCA 90 bp | GTGCCACTCCATGGTTCTGTAGTAGCTGAGCATGACTTCCCACAGTaGTTTGCACAGGTCTGCCAGGCATGGAATATAGCTGTCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VPLHGSVVAEHDFPQ*FAQVCQAWNIAVWC Trigger: ACACCAGACAGCTATATTCCATGCCTGGCAGACCTGTGCAAAGCACTGTGGGAAGTCATGCTCAGCTACTACAGAACCATGGAGTGGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS-3UTR CAA 90 bp | GGCAGCAACACTCTGTCAATGACAAAGCAACACAATGTGCTGCTCATTGCGTTACAGCTTGAGGGTCGCTaGGCTGTTCTCGAAGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSNTLSMTKQHNVLLIALQLEGR*AVLEAP Trigger: GGGAGCTTCGAGAACAGCCAAGCGACCCTCAAGCTG...TAACGCAATGAGCAGCACATTGTGTTGCTTTGTCATTGACAGAGTGTTGCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | GAGCCCTGTGGCCCAATGAGAGTGCTGGAAGGCACAGGAGAAGCATGTAAGGCAGAAGCTTCTGGAATTTaGTATCCGTGTTTCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: EPCGPMRVLEGTGEACKAEASGI*YPCFLH Trigger: GTGCAGGAAACACGGATACAAAATTCCAGAAGCTTC...TGCCTTACATGCTTCTCCTGTGCCTTCCAGCACTCTCATTGGGCCACAGGGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | AGACATCTAAGGCTGGCACGGGCTGAGCCCTGTGGCCCAATGAGAGTGCTGGAACTGCATTTCTTGACATaGGCGTATCCTTCCACAATA | + |
|
Preference number: 5 (lower is better) Translates to: RHLRLARAEPCGPMRVLELHFLT*AYPSTI Trigger: TATTGTGGAAGGATACGCCAATGTCAAGAAATGCAG...TTCCAGCACTCTCATTGGGCCACAGGGCTCAGCCCGTGCCAGCCTTAGATGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS GCA 90 bp | TCTGTAGTAGCTGAGCATGACTTCCCACAGTGCTTTGCACAGGTCTaGCAGGCATGGAATATAGCTGTCTGGTGTCACATGCGTACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SVVAEHDFPQCFAQV*QAWNIAVWCHMRTE Trigger: CTCTGTACGCATGTGACACCAGACAGCTATATTCCATGCCTGGCAGACCTGTGCAAAGCACTGTGGGAAGTCATGCTCAGCTACTACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS GCA 90 bp | AGATGGGTGCATTCACTTTGTTTAGACTGTAATCCGACTTCTTCCTaGTCTTCAGGGTCTCTCGGGAAACACTCTTCACGGGCACGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: RWVHSLCLDCNPTSS*SSGSLGKHSSRARR Trigger: GCGACGTGCCCGTGAAGAGTGTTTCCCGAGAGACCCTGAAGAGCAGGAAGAAGTCGGATTACAGTCTAAACAAAGTGAATGCACCCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CCA 90 bp | TTGTTCAATGCTATTAATCAACTCTTGCTCAGCTTGAGGGTCGCTTaGCTGTTCTCGAAGCTCCCTGAATTCCTCCTTTCCAGGGACCCG | + |
|
Preference number: 5 (lower is better) Translates to: LFNAINQLLLSLRVA*LFSKLPEFLLSRDP Trigger: CGGGTCCCTGGAAAGGAGGAATTCAGGGAGCTTCGAGAACAGCCAAGCGACCCTCAAGCTGAGCAAGAGTTGATTAATAGCATTGAACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
||
| CDS TCA 90 bp | TCTGCCAACCCATACAATGTATCCCCAGATGTCAAAATCACTAGCTaGTTGAGGTGTGGGCTGGGTACCTTCTCCTTTCTTTCCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SANPYNVSPDVKITS*LRCGLGTFSFLSSA Trigger: AGCCGAGGAAAGAAAGGAGAAGGTACCCAGCCCACACCTCAATCAGCTAGTGATTTTGACATCTGGGGATACATTGTATGGGTTGGCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
||
| CDS TCA 90 bp | CAGTTGAGACTGTCTGGGAGTAAAACTGCTGCAGGAAGGGCTTTTTaGCTGCAGGCATCACAGCATCCAAATGTGGCTGAAGGAACTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QLRLSGSKTAAGRAF*LQASQHPNVAEGTQ Trigger: TTGAGTTCCTTCAGCCACATTTGGATGCTGTGATGCCTGCAGTCAAAAAGCCCTTCCTGCAGCAGTTTTACTCCCAGACAGTCTCAACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
||
| CDS GCA 90 bp | AAAAGTGGCCTCCTCAGTACTCATCACATTGCTTCCTTCAGCAGCTaGAGCTGTTTCCTCATTGTCATGTTTCTCGTGCCACTCCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: KSGLLSTHHIASFSS*SCFLIVMFLVPLHG Trigger: ACCATGGAGTGGCACGAGAAACATGACAATGAGGAAACAGCTGCAGCTGCTGAAGGAAGCAATGTGATGAGTACTGAGGAGGCCACTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | GGCAGGCAGCAACACTCTGTCAATGACAAAGCAACACAATGTGCTGCTCATTGCGCTATTAATCAACTCTaGCTCAGCTTGAGGGTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRQQHSVNDKATQCAAHCAINQL*LSLRVA Trigger: AGCGACCCTCAAGCTGAGCAAGAGTTGATTAATAGC...GCAATGAGCAGCACATTGTGTTGCTTTGTCATTGACAGAGTGTTGCTGCCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CTGCCCCTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCATAGGCGCTCTTCTCTaGCTCATCAGACTCATACCC | + |
|
Preference number: 5 (lower is better) Translates to: LPLNLDHSCLTAGDFNILIGALL*LIRLIP Trigger: GGGTATGAGTCTGATGAGCAAGAGAAGAGCGCCTAT...GAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAGGGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | AGGCAAACATTCACCAGGTTGGTCAACTGCTTCGTTGAGTATTCCTGCCCAAAGCTGTTGAAAATCCAATaGCATCAAGGCACGCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RQTFTRLVNCFVEYSCPKLLKIQ*HQGTPL Trigger: GAGGGGCGTGCCTTGATGCAATTGGATTTTCAACAG...CTTTGGGCAGGAATACTCAACGAAGCAGTTGACCAACCTGGTGAATGTTTGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS TCA 90 bp | AGGAAGGGCTTTTTGACTGCAGGCATCACAGCATCCAAATGTGGCTaGAGGAACTCAAACTGCTCAGCCAAGAACACTAAGGATTCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RKGFLTAGITASKCG*RNSNCSAKNTKDSV Trigger: CACAGAATCCTTAGTGTTCTTGGCTGAGCAGTTTGAGTTCCTTCAGCCACATTTGGATGCTGTGATGCCTGCAGTCAAAAAGCCCTTCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | CCCCTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCCATCTGTTGAAAATCCAATaGCATCAAGGCACGCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PLNLDHSCLTAGDFNILHLLKIQ*HQGTPL Trigger: GAGGGGCGTGCCTTGATGCAATTGGATTTTCAACAG...ATGGAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS GCA 90 bp | TACTGCTCAAACAAAGTCACAGGCTTTGAAGAAGTTGCTGATGGCTaGTTACTAGGTGAAACTGATGGGGAGCGAGACTGTTCCAGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: YCSNKVTGFEEVADG*LLGETDGERDCSRN Trigger: ATTCCTGGAACAGTCTCGCTCCCCATCAGTTTCACCTAGTAAGCAGCCATCAGCAACTTCTTCAAAGCCTGTGACTTTGTTTGAGCAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
||
| CDS GCA 90 bp | TTGTGGTCGGCTTGTATTTCAAATGGATTCCCACCACTGCAGTACTaGTCAAACAAAGTCACAGGCTTTGAAGAAGTTGCTGATGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LWSACISNGFPPLQY*SNKVTGFEEVADGC Trigger: GCAGCCATCAGCAACTTCTTCAAAGCCTGTGACTTTGTTTGAGCAGTACTGCAGTGGTGGGAATCCATTTGAAATACAAGCCGACCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | TTCATCATTTATGATCACTGTTATAGCCAAATTAACACTGGCAGAAGCTCTGACCAGCTTGAGGGTCGCTaGGCTGTTCTCGAAGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: FIIYDHCYSQINTGRSSDQLEGR*AVLEAP Trigger: GGGAGCTTCGAGAACAGCCAAGCGACCCTCAAGCTG...GTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAACAGTGATCATAAATGATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CACTGTCCAGATCTCCAGTTTATGTGTTTCAACAGTGCACTGCTAGGATGGGCAACAAAGTCACAGGCTTaGAAGAAGTTGCTGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: HCPDLQFMCFNSALLGWATKSQA*KKLLMA Trigger: AGCCATCAGCAACTTCTTCAAAGCCTGTGACTTTGT...TGCCCATCCTAGCAGTGCACTGTTGAAACACATAAACTGGAGATCTGGACAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | GAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCCGAAAGATAGGCGCTCTTCTCTaGCTCATCAGACTCATACCC | + |
|
Preference number: 5 (lower is better) Translates to: ENYEECMKNCLSCRTGRKIGALL*LIRLIP Trigger: GGGTATGAGTCTGATGAGCAAGAGAAGAGCGCCTAT...CTTTCGGCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | TATCCAGAAGATCAGAGCAGATGCTCCCTGCTAGAAATGTTTGTGTATGTGTTCTGCAGGAAGGGCTTTTaGACTGCAGGCATCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: YPEDQSRCSLLEMFVYVFCRKGF*TAGITA Trigger: TGCTGTGATGCCTGCAGTCAAAAAGCCCTTCCTGCA...GAACACATACACAAACATTTCTAGCAGGGAGCATCTGCTCTGATCTTCTGGATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | GAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCCGAAAGGCAGTTCACTGGCAGTaGAGACTGTCTGGGAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: ENYEECMKNCLSCRTGRKAVHWQ*RLSGSK Trigger: TTTACTCCCAGACAGTCTCAACTGCCAGTGAACTGC...CTTTCGGCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | TCTAGGACACACTTGAAAAGGGCTCAAATGGACCTGACTAGACAAAGGACATTGCTTACCCTGTGCTCTTaGATCCAACGCTCCATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRTHLKRAQMDLTRQRTLLTLCS*IQRSMS Trigger: TGACATGGAGCGTTGGATCAAAGAGCACAGGGTAAG...CAATGTCCTTTGTCTAGTCAGGTCCATTTGAGCCCTTTTCAAGTGTGTCCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS TCA 90 bp | ATATTCAAGTGCCTCCTCCCATTTGTGCAGATGACAGCAGCCAACTaGAGACCTGTCTGCAGTGATGTGACTCTTTCAAGTTCCTTTACA | + |
|
Preference number: 5 (lower is better) Translates to: IFKCLLPFVQMTAAN*RPVCSDVTLSSSFT Trigger: TGTAAAGGAACTTGAAAGAGTCACATCACTGCAGACAGGTCTTCAGTTGGCTGCTGTCATCTGCACAAATGGGAGGAGGCACTTGAATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | GTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAGTTAAAAACAGAGAACATAAGGCACCAAGATCATaGAGGCTCTCCGGAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VIAKLTLAEALTVKNREHKAPRS*RLSGGL Trigger: GAGCCCTCCGGAGAGCCTCAATGATCTTGGTGCCTT...ATGTTCTCTGTTTTTAACTGTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CTGCCCCTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCCAACTGTTCCTCAATTaGCTCCAAAGTATCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPLNLDHSCLTAGDFNILQLFLN*LQSILQ Trigger: CTGCAAGATACTTTGGAGCAAATTGAGGAACAGTTG...GAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAGGGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | TACAGGCCGAAAGAAGATCAATGTCCCCGAGGAAAGAGCTCTGTTCATTATCTTTCAGTACTCATCACATaGCTTCCTTCAGCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: YRPKEDQCPRGKSSVHYLSVLIT*LPSAAA Trigger: TGCAGCTGCTGAAGGAAGCAATGTGATGAGTACTGA...AAGATAATGAACAGAGCTCTTTCCTCGGGGACATTGATCTTCTTTCGGCCTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS TCA 90 bp | CATAGCCAAGCACAACCTGAAATACGGTGTTGTGAATGGCTTGAGTaGAGTGCATATGAAGCTGATCCATCGCAGTCTGTGTTTTTCCAA | + |
|
Preference number: 5 (lower is better) Translates to: HSQAQPEIRCCEWLE*SAYEADPSQSVFFQ Trigger: TTGGAAAAACACAGACTGCGATGGATCAGCTTCATATGCACTTCACTCAAGCCATTCACAACACCGTATTTCAGGTTGTGCTTGGCTATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
||
| CDS GCA 90 bp | CTTCATCTTTGTGGTCGGCTTGTATTTCAAATGGATTCCCACCACTaGAGTACTGCTCAAACAAAGTCACAGGCTTTGAAGAAGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LHLCGRLVFQMDSHH*STAQTKSQALKKLL Trigger: CAGCAACTTCTTCAAAGCCTGTGACTTTGTTTGAGCAGTACTGCAGTGGTGGGAATCCATTTGAAATACAAGCCGACCACAAAGATGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | CAGGTGACTTTAATATTCTCCATGTTTTCCTCAAACTGTTTATCCAGAAGATCAAAGGCACCAAGATCATaGAGGCTCTCCGGAGGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QVTLIFSMFSSNCLSRRSKAPRS*RLSGGL Trigger: GAGCCCTCCGGAGAGCCTCAATGATCTTGGTGCCTT...TGATCTTCTGGATAAACAGTTTGAGGAAAACATGGAGAATATTAAAGTCACCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | TCTAGGACACACTTGAAAAGGGCTCAAATGGACCTGACTAGACAAAGGACATTGTCTAACTCTTGCAGATaGAGAACAGGAGGAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRTHLKRAQMDLTRQRTLSNSCR*RTGGSF Trigger: GAAGCTTCCTCCTGTTCTCAATCTGCAAGAGTTAGA...CAATGTCCTTTGTCTAGTCAGGTCCATTTGAGCCCTTTTCAAGTGTGTCCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | GAAACTGGAGCATATAAAAGTCACTTGAGAACACCACACACAGTTGAGTATTTTACTTCCCACAGTGCTTaGCACAGGTCTGCCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: ETGAYKSHLRTPHTVEYFTSHSA*HRSARH Trigger: ATGCCTGGCAGACCTGTGCAAAGCACTGTGGGAAGT...AAAATACTCAACTGTGTGTGGTGTTCTCAAGTGACTTTTATATGCTCCAGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | TTCATCATTTATGATCACTGTTATAGCCAAATTAACACTGGCAGAAGCTCTGACACTTCCCACAGTGCTTaGCACAGGTCTGCCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: FIIYDHCYSQINTGRSSDTSHSA*HRSARH Trigger: ATGCCTGGCAGACCTGTGCAAAGCACTGTGGGAAGT...GTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAACAGTGATCATAAATGATGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | AGATCAGAGCAGATGCTCCCTGCTAGAAATGTTTGTGTATGTGTTCAATTAAGCGCAGCTGTTTCCTCATaGTCATGTTTCTCGTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RSEQMLPARNVCVCVQLSAAVSS*SCFSCH Trigger: GTGGCACGAGAAACATGACAATGAGGAAACAGCTGC...GCTTAATTGAACACATACACAAACATTTCTAGCAGGGAGCATCTGCTCTGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | GTGATTTCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACATCAGTACTCATCACATaGCTTCCTTCAGCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VISPPPTSWFLHFDLFETSVLIT*LPSAAA Trigger: TGCAGCTGCTGAAGGAAGCAATGTGATGAGTACTGA...TGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGAAATCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | CTGTCCAGATCTCCAGTTTATGTGTTTCAACAGTGCACTGCTAGGATGGGCATAATCTTTGTGGTCGGCTaGTATTTCAAATGGATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSRSPVYVFQQCTARMGIIFVVG*YFKWIP Trigger: GGGAATCCATTTGAAATACAAGCCGACCACAAAGAT...TATGCCCATCCTAGCAGTGCACTGTTGAAACACATAAACTGGAGATCTGGACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | AGGCAAACATTCACCAGGTTGGTCAACTGCTTCGTTGAGTATTCCTGCCCAAAGTCAGTTTCTTCATCTTaGTGGTCGGCTTGTATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RQTFTRLVNCFVEYSCPKSVSSS*WSACIS Trigger: TGAAATACAAGCCGACCACAAAGATGAAGAAACTGA...CTTTGGGCAGGAATACTCAACGAAGCAGTTGACCAACCTGGTGAATGTTTGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | TTTCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACAAACAGCAGTTCACTGGCAGTaGAGACTGTCTGGGAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: FLLPQLVGSFILICLRQTAVHWQ*RLSGSK Trigger: TTTACTCCCAGACAGTCTCAACTGCCAGTGAACTGC...TGTTTGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | CCCCTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCCATTCATTACTGCATTTCTaGACATTGGCGTATCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLNLDHSCLTAGDFNILHSLLHF*TLAYPS Trigger: GGAAGGATACGCCAATGTCAAGAAATGCAGTAATGA...ATGGAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAGGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS CCA 90 bp | TCATACCCATTAGAGGCTAAGACATCTTCAGTTTCTTCATCTTTGTaGTCGGCTTGTATTTCAAATGGATTCCCACCACTGCAGTACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SYPLEAKTSSVSSSL*SACISNGFPPLQYC Trigger: GCAGTACTGCAGTGGTGGGAATCCATTTGAAATACAAGCCGACCACAAAGATGAAGAAACTGAAGATGTCTTAGCCTCTAATGGGTATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | CTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCCATGTTAAGAAGCCGGTAAGCTaGCTGAACCTTGGTATAATG | + |
|
Preference number: 5 (lower is better) Translates to: LNLDHSCLTAGDFNILHVKKPVS*LNLGIM Trigger: CATTATACCAAGGTTCAGCAAGCTTACCGGCTTCTT...AACATGGAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | CAGGTGACTTTAATATTCTCCATGTTTTCCTCAAACTGTTTATCCAGAAGATCAACTTCCCACAGTGCTTaGCACAGGTCTGCCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: QVTLIFSMFSSNCLSRRSTSHSA*HRSARH Trigger: ATGCCTGGCAGACCTGTGCAAAGCACTGTGGGAAGT...TGATCTTCTGGATAAACAGTTTGAGGAAAACATGGAGAATATTAAAGTCACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | ATAAAATGTCATCCGACCAGACGTTTCAAGATAGAGAACAAGGGTGAGGACATATCAGTACTCATCACATaGCTTCCTTCAGCAGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IKCHPTRRFKIENKGEDISVLIT*LPSAAA Trigger: TGCAGCTGCTGAAGGAAGCAATGTGATGAGTACTGA...TATGTCCTCACCCTTGTTCTCTATCTTGAAACGTCTGGTCGGATGACATTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001412.17 |
||
| CDS-3UTR CAA 90 bp | CTGTCCAGATCTCCAGTTTATGTGTTTCAACAGTGCACTGCTAGGATGGGCATAAAATTCTTCTCCAACTaGCATCAACCTGCTGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: LSRSPVYVFQQCTARMGIKFFSN*HQPADN Trigger: ATTGTCAGCAGGTTGATGCAAGTTGGAGAAGAATTT...TATGCCCATCCTAGCAGTGCACTGTTGAAACACATAAACTGGAGATCTGGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CACTGTCCAGATCTCCAGTTTATGTGTTTCAACAGTGCACTGCTAGGATGGGCATGCAAAACTTCAGACTaGCTACCACAAAATTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HCPDLQFMCFNSALLGWACKTSD*LPQNSS Trigger: AGAAGAATTTTGTGGTAGCAAGTCTGAAGTTTTGCA...TGCCCATCCTAGCAGTGCACTGTTGAAACACATAAACTGGAGATCTGGACAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | AGGCAAACATTCACCAGGTTGGTCAACTGCTTCGTTGAGTATTCCTGCCCAAAGGAAGTAATTGACACTTaGTTTTCTAATGGACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RQTFTRLVNCFVEYSCPKEVIDT*FSNGLL Trigger: CAGGAGTCCATTAGAAAACAAAGTGTCAATTACTTC...CTTTGGGCAGGAATACTCAACGAAGCAGTTGACCAACCTGGTGAATGTTTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CATTCATCCTCCCATTTAAGACACTCTCCAAAAACTATTCATAGACACATTAGCTGCAGGAAGGGCTTTTaGACTGCAGGCATCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HSSSHLRHSPKTIHRHISCRKGF*TAGITA Trigger: TGCTGTGATGCCTGCAGTCAAAAAGCCCTTCCTGCA...GCTAATGTGTCTATGAATAGTTTTTGGAGAGTGTCTTAAATGGGAGGATGAATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACAAACAGCTGTGACATGATCTCTTaGACATCCCACTTCACATTC | + |
|
Preference number: 5 (lower is better) Translates to: SPPPTSWFLHFDLFETNSCDMIS*TSHFTF Trigger: GAATGTGAAGTGGGATGTCAAAGAGATCATGTCACA...GCTGTTTGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | GTGATTTCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACAGCTCCCAAAGTATATTaGATACAGGCAGAGGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: VISPPPTSWFLHFDLFETAPKVY*IQAEVS Trigger: GGATACCTCTGCCTGTATCAAATATACTTTGGGAGC...TGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGAAATCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS CCA 90 bp | ATAGTCAAAGAGCTGAGACATGAAATGGATCACATCGAAGGCGATTaGCTTAAGGATGTTCATCATCTGCATGTACTTTCCAACAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: IVKELRHEMDHIEGD*LKDVHHLHVLSNKP Trigger: AGGCTTGTTGGAAAGTACATGCAGATGATGAACATCCTTAAGCCAATCGCCTTCGATGTGATCCATTTCATGTCTCAGCTCTTTGACTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | TTAGAAGAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCTCTAACTCTTGCAGATaGAGAACAGGAGGAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LEENYEECMKNCLSCRTGSNSCR*RTGGSF Trigger: GAAGCTTCCTCCTGTTCTCAATCTGCAAGAGTTAGA...GCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTCTTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | AATAAATGTGTATGTACTCCACATGTGCTTGCTGTCTGTAGAGTTCAGAAGAGGTCTAACTCTTGCAGATaGAGAACAGGAGGAAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NKCVCTPHVLAVCRVQKRSNSCR*RTGGSF Trigger: GAAGCTTCCTCCTGTTCTCAATCTGCAAGAGTTAGA...CCTCTTCTGAACTCTACAGACAGCAAGCACATGTGGAGTACATACACATTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | AATAAATGTGTATGTACTCCACATGTGCTTGCTGTCTGTAGAGTTCAGAAGAGGGGTGTTGTGAATGGCTaGAGTGAAGTGCATATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NKCVCTPHVLAVCRVQKRGVVNG*SEVHMK Trigger: CTTCATATGCACTTCACTCAAGCCATTCACAACACC...CCTCTTCTGAACTCTACAGACAGCAAGCACATGTGGAGTACATACACATTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | AGATCAGAGCAGATGCTCCCTGCTAGAAATGTTTGTGTATGTGTTCAATTAAGCGGTGTTGTGAATGGCTaGAGTGAAGTGCATATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RSEQMLPARNVCVCVQLSGVVNG*SEVHMK Trigger: CTTCATATGCACTTCACTCAAGCCATTCACAACACC...GCTTAATTGAACACATACACAAACATTTCTAGCAGGGAGCATCTGCTCTGATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | ATAAAATGTCATCCGACCAGACGTTTCAAGATAGAGAACAAGGGTGAGGACATAGAAGCTTCTGGAATTTaGTATCCGTGTTTCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: IKCHPTRRFKIENKGEDIEASGI*YPCFLH Trigger: GTGCAGGAAACACGGATACAAAATTCCAGAAGCTTC...TATGTCCTCACCCTTGTTCTCTATCTTGAAACGTCTGGTCGGATGACATTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001412.17 |
||
| CDS-3UTR CAA 90 bp | TTTCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACAAACAGAAGCTTCTGGAATTTaGTATCCGTGTTTCCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: FLLPQLVGSFILICLRQTEASGI*YPCFLH Trigger: GTGCAGGAAACACGGATACAAAATTCCAGAAGCTTC...TGTTTGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | GAAACTGGAGCATATAAAAGTCACTTGAGAACACCACACACAGTTGAGTATTTTGCAGCTGTTTCCTCATaGTCATGTTTCTCGTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ETGAYKSHLRTPHTVEYFAAVSS*SCFSCH Trigger: GTGGCACGAGAAACATGACAATGAGGAAACAGCTGC...AAAATACTCAACTGTGTGTGGTGTTCTCAAGTGACTTTTATATGCTCCAGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | ATAAAATGTCATCCGACCAGACGTTTCAAGATAGAGAACAAGGGTGAGGACATAACAAAGTCACAGGCTTaGAAGAAGTTGCTGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IKCHPTRRFKIENKGEDITKSQA*KKLLMA Trigger: AGCCATCAGCAACTTCTTCAAAGCCTGTGACTTTGT...TATGTCCTCACCCTTGTTCTCTATCTTGAAACGTCTGGTCGGATGACATTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000001412.17 |
||
| CDS-3UTR CAA 90 bp | AGATCAGAGCAGATGCTCCCTGCTAGAAATGTTTGTGTATGTGTTCAATTAAGCACAAAGTCACAGGCTTaGAAGAAGTTGCTGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSEQMLPARNVCVCVQLSTKSQA*KKLLMA Trigger: AGCCATCAGCAACTTCTTCAAAGCCTGTGACTTTGT...GCTTAATTGAACACATACACAAACATTTCTAGCAGGGAGCATCTGCTCTGATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | TCCAGAAGATCAGAGCAGATGCTCCCTGCTAGAAATGTTTGTGTATGTGTTCAAATCTTTGTGGTCGGCTaGTATTTCAAATGGATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: SRRSEQMLPARNVCVCVQIFVVG*YFKWIP Trigger: GGGAATCCATTTGAAATACAAGCCGACCACAAAGAT...TTGAACACATACACAAACATTTCTAGCAGGGAGCATCTGCTCTGATCTTCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | GAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCCGAAAGTCAGTTTCTTCATCTTaGTGGTCGGCTTGTATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: ENYEECMKNCLSCRTGRKSVSSS*WSACIS Trigger: TGAAATACAAGCCGACCACAAAGATGAAGAAACTGA...CTTTCGGCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CATAGACACATTAGCCACTATCCCTTCCAACTATGTATTTATAGTACACTCTTTTGCAGGAAGGGCTTTTaGACTGCAGGCATCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HRHISHYPFQLCIYSTLFCRKGF*TAGITA Trigger: TGCTGTGATGCCTGCAGTCAAAAAGCCCTTCCTGCA...AAAGAGTGTACTATAAATACATAGTTGGAAGGGATAGTGGCTAATGTGTCTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | TTCATCATTTATGATCACTGTTATAGCCAAATTAACACTGGCAGAAGCTCTGACGCAGTTCACTGGCAGTaGAGACTGTCTGGGAGTAAA | + |
|
Preference number: 5 (lower is better) Translates to: FIIYDHCYSQINTGRSSDAVHWQ*RLSGSK Trigger: TTTACTCCCAGACAGTCTCAACTGCCAGTGAACTGC...GTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAACAGTGATCATAAATGATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | GAAACTGGAGCATATAAAAGTCACTTGAGAACACCACACACAGTTGAGTATTTTCTGTTGAAAATCCAATaGCATCAAGGCACGCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ETGAYKSHLRTPHTVEYFLLKIQ*HQGTPL Trigger: GAGGGGCGTGCCTTGATGCAATTGGATTTTCAACAG...AAAATACTCAACTGTGTGTGGTGTTCTCAAGTGACTTTTATATGCTCCAGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | TTAGAAGAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCAAAATCCTGTGCTCTTaGATCCAACGCTCCATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LEENYEECMKNCLSCRTGKILCS*IQRSMS Trigger: TGACATGGAGCGTTGGATCAAAGAGCACAGGATTTT...GCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTCTTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164052.5 |
||
| CDS GCA 90 bp | TTGGCGTATCCTTCCACAATAGTTCTGTTAGCTAATCGTATACAATaGTCCCAAAGTATATTTGATACAGGCAGAGGTATCCGAACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LAYPSTIVLLANRIQ*SQSIFDTGRGIRTL Trigger: GAGAGTTCGGATACCTCTGCCTGTATCAAATATACTTTGGGAGCATTGTATACGATTAGCTAACAGAACTATTGTGGAAGGATACGCCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | GTCTCTTTCTATGATGCAGCACAGGAAAATCAAACTCATATTCTGATTCTAGGAGCTATTAATCAACTCTaGCTCAGCTTGAGGGTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: VSFYDAAQENQTHILILGAINQL*LSLRVA Trigger: AGCGACCCTCAAGCTGAGCAAGAGTTGATTAATAGC...TCCTAGAATCAGAATATGAGTTTGATTTTCCTGTGCTGCATCATAGAAAGAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACAAACAGCTGTTGTTGCTTTAATTaGTCTCTGTACTCCTCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: SPPPTSWFLHFDLFETNSCCCFN*SLYSSN Trigger: GTTAGAGGAGTACAGAGACAAATTAAAGCAACAACA...GCTGTTTGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | GAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCCGAAAGGCGTATGTCAGTTCTTaGCAATGTTTTTATGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ENYEECMKNCLSCRTGRKAYVSS*QCFYGS Trigger: AGAACCATAAAAACATTGCAAAGAACTGACATACGC...CTTTCGGCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAAGCAGCTGTTTCCTCATaGTCATGTTTCTCGTGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LIIRKYCTFILPFKTLSKAAVSS*SCFSCH Trigger: GTGGCACGAGAAACATGACAATGAGGAAACAGCTGC...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | TCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACAAACAGCTGCAAAACTTCAGACTaGCTACCACAAAATTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SPPPTSWFLHFDLFETNSCKTSD*LPQNSS Trigger: AGAAGAATTTTGTGGTAGCAAGTCTGAAGTTTTGCA...GCTGTTTGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAAATAGGCGCTCTTCTCTaGCTCATCAGACTCATACCC | + |
|
Preference number: 5 (lower is better) Translates to: LIIRKYCTFILPFKTLSKIGALL*LIRLIP Trigger: GGGTATGAGTCTGATGAGCAAGAGAAGAGCGCCTAT...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | GTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAGTTAAAAACAGAGAACATCAAACATTCACCAGGTaGGTCAACTGCTTCGTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: VIAKLTLAEALTVKNREHQTFTR*VNCFVE Trigger: CTCAACGAAGCAGTTGACCAACCTGGTGAATGTTTG...ATGTTCTCTGTTTTTAACTGTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000001412.17 |
||
| CDS-3UTR CAA 90 bp | CATAGACACATTAGCCACTATCCCTTCCAACTATGTATTTATAGTACACTCTTTGCTATTAATCAACTCTaGCTCAGCTTGAGGGTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: HRHISHYPFQLCIYSTLFAINQL*LSLRVA Trigger: AGCGACCCTCAAGCTGAGCAAGAGTTGATTAATAGC...AAAGAGTGTACTATAAATACATAGTTGGAAGGGATAGTGGCTAATGTGTCTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CATTCATCCTCCCATTTAAGACACTCTCCAAAAACTATTCATAGACACATTAGCAAGAAGCCGGTAAGCTaGCTGAACCTTGGTATAATG | + |
|
Preference number: 5 (lower is better) Translates to: HSSSHLRHSPKTIHRHISKKPVS*LNLGIM Trigger: CATTATACCAAGGTTCAGCAAGCTTACCGGCTTCTT...GCTAATGTGTCTATGAATAGTTTTTGGAGAGTGTCTTAAATGGGAGGATGAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | TTCATCATTTATGATCACTGTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAAGAAGCCGGTAAGCTaGCTGAACCTTGGTATAATG | + |
|
Preference number: 5 (lower is better) Translates to: FIIYDHCYSQINTGRSSDKKPVS*LNLGIM Trigger: CATTATACCAAGGTTCAGCAAGCTTACCGGCTTCTT...GTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAACAGTGATCATAAATGATGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CATTCATCCTCCCATTTAAGACACTCTCCAAAAACTATTCATAGACACATTAGCGGTGTTGTGAATGGCTaGAGTGAAGTGCATATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: HSSSHLRHSPKTIHRHISGVVNG*SEVHMK Trigger: CTTCATATGCACTTCACTCAAGCCATTCACAACACC...GCTAATGTGTCTATGAATAGTTTTTGGAGAGTGTCTTAAATGGGAGGATGAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CTGAACTTAGACCACTCCTGCTTGACTGCAGGTGACTTTAATATTCTCCATGTTGAAGTAATTGACACTTaGTTTTCTAATGGACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LNLDHSCLTAGDFNILHVEVIDT*FSNGLL Trigger: CAGGAGTCCATTAGAAAACAAAGTGTCAATTACTTC...AACATGGAGAATATTAAAGTCACCTGCAGTCAAGCAGGAGTGGTCTAAGTTCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | TTTCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACAAACATCAGTTTCTTCATCTTaGTGGTCGGCTTGTATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FLLPQLVGSFILICLRQTSVSSS*WSACIS Trigger: TGAAATACAAGCCGACCACAAAGATGAAGAAACTGA...TGTTTGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | TCCAGAAGATCAGAGCAGATGCTCCCTGCTAGAAATGTTTGTGTATGTGTTCAAACTTCATTTAACCGCTaGTTAAACTGCTCAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRRSEQMLPARNVCVCVQTSFNR*LNCSNS Trigger: GGAATTTGAGCAGTTTAACAAGCGGTTAAATGAAGT...TTGAACACATACACAAACATTTCTAGCAGGGAGCATCTGCTCTGATCTTCTGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | TTAGAAGAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCTGTTGTTGCTTTAATTaGTCTCTGTACTCCTCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: LEENYEECMKNCLSCRTGCCCFN*SLYSSN Trigger: GTTAGAGGAGTACAGAGACAAATTAAAGCAACAACA...GCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTCTTCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | TTTCTCCTCCCCCAACTAGTTGGTTCCTTCATTTTGATCTGTTTGAGACAAACAGCGTATGTCAGTTCTTaGCAATGTTTTTATGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FLLPQLVGSFILICLRQTAYVSS*QCFYGS Trigger: AGAACCATAAAAACATTGCAAAGAACTGACATACGC...TGTTTGTCTCAAACAGATCAAAATGAAGGAACCAACTAGTTGGGGGAGGAGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | TTAGAAGAGAATTATGAGGAGTGTATGAAGAACTGCCTTTCATGTCGTACAGGCTGCAAAACTTCAGACTaGCTACCACAAAATTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LEENYEECMKNCLSCRTGCKTSD*LPQNSS Trigger: AGAAGAATTTTGTGGTAGCAAGTCTGAAGTTTTGCA...GCCTGTACGACATGAAAGGCAGTTCTTCATACACTCCTCATAATTCTCTTCTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | GAAACTGGAGCATATAAAAGTCACTTGAGAACACCACACACAGTTGAGTATTTTATCTTTGTGGTCGGCTaGTATTTCAAATGGATTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ETGAYKSHLRTPHTVEYFIFVVG*YFKWIP Trigger: GGGAATCCATTTGAAATACAAGCCGACCACAAAGAT...AAAATACTCAACTGTGTGTGGTGTTCTCAAGTGACTTTTATATGCTCCAGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CATTCATCCTCCCATTTAAGACACTCTCCAAAAACTATTCATAGACACATTAGCTGTGACATGATCTCTTaGACATCCCACTTCACATTC | + |
|
Preference number: 5 (lower is better) Translates to: HSSSHLRHSPKTIHRHISCDMIS*TSHFTF Trigger: GAATGTGAAGTGGGATGTCAAAGAGATCATGTCACA...GCTAATGTGTCTATGAATAGTTTTTGGAGAGTGTCTTAAATGGGAGGATGAATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAAGCTCCCAAAGTATATTaGATACAGGCAGAGGTATCC | + |
|
Preference number: 5 (lower is better) Translates to: LIIRKYCTFILPFKTLSKAPKVY*IQAEVS Trigger: GGATACCTCTGCCTGTATCAAATATACTTTGGGAGC...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | GTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAGTTAAAAACAGAGAACATCTGCATTTCTTGACATaGGCGTATCCTTCCACAATA | + |
|
Preference number: 5 (lower is better) Translates to: VIAKLTLAEALTVKNREHLHFLT*AYPSTI Trigger: TATTGTGGAAGGATACGCCAATGTCAAGAAATGCAG...ATGTTCTCTGTTTTTAACTGTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | GTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAGTTAAAAACAGAGAACATTCATTACTGCATTTCTaGACATTGGCGTATCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VIAKLTLAEALTVKNREHSLLHF*TLAYPS Trigger: GGAAGGATACGCCAATGTCAAGAAATGCAGTAATGA...ATGTTCTCTGTTTTTAACTGTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAACAACTGTTCCTCAATTaGCTCCAAAGTATCTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LIIRKYCTFILPFKTLSKQLFLN*LQSILQ Trigger: CTGCAAGATACTTTGGAGCAAATTGAGGAACAGTTG...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | TTCATCATTTATGATCACTGTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAAATTCTTCTCCAACTaGCATCAACCTGCTGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: FIIYDHCYSQINTGRSSDKFFSN*HQPADN Trigger: ATTGTCAGCAGGTTGATGCAAGTTGGAGAAGAATTT...GTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAACAGTGATCATAAATGATGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | GTCTCTTTCTATGATGCAGCACAGGAAAATCAAACTCATATTCTGATTCTAGGAAAATTCTTCTCCAACTaGCATCAACCTGCTGACAAT | + |
|
Preference number: 5 (lower is better) Translates to: VSFYDAAQENQTHILILGKFFSN*HQPADN Trigger: ATTGTCAGCAGGTTGATGCAAGTTGGAGAAGAATTT...TCCTAGAATCAGAATATGAGTTTGATTTTCCTGTGCTGCATCATAGAAAGAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | CATAGACACATTAGCCACTATCCCTTCCAACTATGTATTTATAGTACACTCTTTTGTGACATGATCTCTTaGACATCCCACTTCACATTC | + |
|
Preference number: 5 (lower is better) Translates to: HRHISHYPFQLCIYSTLFCDMIS*TSHFTF Trigger: GAATGTGAAGTGGGATGTCAAAGAGATCATGTCACA...AAAGAGTGTACTATAAATACATAGTTGGAAGGGATAGTGGCTAATGTGTCTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CAGGTGACTTTAATATTCTCCATGTTTTCCTCAAACTGTTTATCCAGAAGATCACTGCATTTCTTGACATaGGCGTATCCTTCCACAATA | + |
|
Preference number: 5 (lower is better) Translates to: QVTLIFSMFSSNCLSRRSLHFLT*AYPSTI Trigger: TATTGTGGAAGGATACGCCAATGTCAAGAAATGCAG...TGATCTTCTGGATAAACAGTTTGAGGAAAACATGGAGAATATTAAAGTCACCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
||
| CDS-3UTR CAA 90 bp | CATAGACACATTAGCCACTATCCCTTCCAACTATGTATTTATAGTACACTCTTTTCATTACTGCATTTCTaGACATTGGCGTATCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HRHISHYPFQLCIYSTLFSLLHF*TLAYPS Trigger: GGAAGGATACGCCAATGTCAAGAAATGCAGTAATGA...AAAGAGTGTACTATAAATACATAGTTGGAAGGGATAGTGGCTAATGTGTCTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CATTCATCCTCCCATTTAAGACACTCTCCAAAAACTATTCATAGACACATTAGCTGTTGTTGCTTTAATTaGTCTCTGTACTCCTCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: HSSSHLRHSPKTIHRHISCCCFN*SLYSSN Trigger: GTTAGAGGAGTACAGAGACAAATTAAAGCAACAACA...GCTAATGTGTCTATGAATAGTTTTTGGAGAGTGTCTTAAATGGGAGGATGAATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | GTTATAGCCAAATTAACACTGGCAGAAGCTCTGACAGTTAAAAACAGAGAACATGAAGTAATTGACACTTaGTTTTCTAATGGACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VIAKLTLAEALTVKNREHEVIDT*FSNGLL Trigger: CAGGAGTCCATTAGAAAACAAAGTGTCAATTACTTC...ATGTTCTCTGTTTTTAACTGTCAGAGCTTCTGCCAGTGTTAATTTGGCTATAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CATAGACACATTAGCCACTATCCCTTCCAACTATGTATTTATAGTACACTCTTTGCGTATGTCAGTTCTTaGCAATGTTTTTATGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HRHISHYPFQLCIYSTLFAYVSS*QCFYGS Trigger: AGAACCATAAAAACATTGCAAAGAACTGACATACGC...AAAGAGTGTACTATAAATACATAGTTGGAAGGGATAGTGGCTAATGTGTCTATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CTCATAATTAGGAAATACTGTACATTCATCCTCCCATTTAAGACACTCTCCAAAACTTCATTTAACCGCTaGTTAAACTGCTCAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: LIIRKYCTFILPFKTLSKTSFNR*LNCSNS Trigger: GGAATTTGAGCAGTTTAACAAGCGGTTAAATGAAGT...TTTGGAGAGTGTCTTAAATGGGAGGATGAATGTACAGTATTTCCTAATTATGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS-3UTR CAA 90 bp | CATAGACACATTAGCCACTATCCCTTCCAACTATGTATTTATAGTACACTCTTTACTTCATTTAACCGCTaGTTAAACTGCTCAAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: HRHISHYPFQLCIYSTLFTSFNR*LNCSNS Trigger: GGAATTTGAGCAGTTTAACAAGCGGTTAAATGAAGT...AAAGAGTGTACTATAAATACATAGTTGGAAGGGATAGTGGCTAATGTGTCTATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 |
||
| CDS CAA 72 bp | CCAGGGACCCGAAGGCTCTCAAAGGCACCAAGATCATaGAGGCTCTCCGGAGGGCTCTTCAGACCCTGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PGTRRLSKAPRS*RLSGGLFRPCR Trigger: CCGGCAGGGTCTGAAGAGCCCTCCGGAGAGCCTCAATGATCTTGGTGCCTTTGAGAGCCTTCGGGTCCCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
||
| CDS CAA 90 bp | TCCTCCTTTCCAGGGACCCGAAGGCTCTCAAAGGCACCAAGATCATaGAGGCTCTCCGGAGGGCTCTTCAGACCCTGCCGGGTCATGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SSFPGTRRLSKAPRS*RLSGGLFRPCRVMR Trigger: TCTCATGACCCGGCAGGGTCTGAAGAGCCCTCCGGAGAGCCTCAATGATCTTGGTGCCTTTGAGAGCCTTCGGGTCCCTGGAAAGGAGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
||
| CDS TCA 72 bp | GGCTGGGTACCTTCTCCTTTCTTTCCTCGGCTGCTGTaGGAGTGGCAGTTGGATCAGCTGAGCCCTCCAGGT | + |
|
Preference number: 6 (lower is better) Translates to: GWVPSPFFPRLL*EWQLDQLSPPG Trigger: ACCTGGAGGGCTCAGCTGATCCAACTGCCACTCTCACAGCAGCCGAGGAAAGAAAGGAGAAGGTACCCAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
||
| CDS CCA 72 bp | GACTTCCCACAGTGCTTTGCACAGGTCTGCCAGGCATaGAATATAGCTGTCTGGTGTCACATGCGTACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: DFPQCFAQVCQA*NIAVWCHMRTE Trigger: CTCTGTACGCATGTGACACCAGACAGCTATATTCCATGCCTGGCAGACCTGTGCAAAGCACTGTGGGAAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
||
| CDS TCA 72 bp | AATCCAGTAAATGGGCTTGCGCAGTTCACTGGCAGTTaGGACTGTCTGGGAGTAAAACTGCTGCAGGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: NPVNGLAQFTGS*DCLGVKLLQEG Trigger: CCCTTCCTGCAGCAGTTTTACTCCCAGACAGTCTCAACTGCCAGTGAACTGCGCAAGCCCATTTACTGGATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CCA 72 bp | CAGCCACAATCCAGTAAATGGGCTTGCGCAGTTCACTaGCAGTTGAGACTGTCTGGGAGTAAAACTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: QPQSSKWACAVH*QLRLSGSKTAA Trigger: TGCAGCAGTTTTACTCCCAGACAGTCTCAACTGCCAGTGAACTGCGCAAGCCCATTTACTGGATTGTGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CAA 72 bp | CCACGGTCAAAAGTGGCCTCCTCAGTACTCATCACATaGCTTCCTTCAGCAGCTGCAGCTGTTTCCTCATTG | + |
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Preference number: 6 (lower is better) Translates to: PRSKVASSVLIT*LPSAAAAVSSL Trigger: CAATGAGGAAACAGCTGCAGCTGCTGAAGGAAGCAATGTGATGAGTACTGAGGAGGCCACTTTTGACCGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CAA 72 bp | CAATCCAGTAAATGGGCTTGCGCAGTTCACTGGCAGTaGAGACTGTCTGGGAGTAAAACTGCTGCAGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: QSSKWACAVHWQ*RLSGSKTAAGR Trigger: CCTTCCTGCAGCAGTTTTACTCCCAGACAGTCTCAACTGCCAGTGAACTGCGCAAGCCCATTTACTGGATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS TCA 72 bp | CTGTCTGGGAGTAAAACTGCTGCAGGAAGGGCTTTTTaGCTGCAGGCATCACAGCATCCAAATGTGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LSGSKTAAGRAF*LQASQHPNVAE Trigger: TTCAGCCACATTTGGATGCTGTGATGCCTGCAGTCAAAAAGCCCTTCCTGCAGCAGTTTTACTCCCAGACAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS GCA 72 bp | CATGGTTCTGTAGTAGCTGAGCATGACTTCCCACAGTaGTTTGCACAGGTCTGCCAGGCATGGAATATAGCT | + |
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Preference number: 6 (lower is better) Translates to: HGSVVAEHDFPQ*FAQVCQAWNIA Trigger: AGCTATATTCCATGCCTGGCAGACCTGTGCAAAGCACTGTGGGAAGTCATGCTCAGCTACTACAGAACCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS GCA 72 bp | CACGGTCAAAAGTGGCCTCCTCAGTACTCATCACATTaGTTCCTTCAGCAGCTGCAGCTGTTTCCTCATTGT | + |
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Preference number: 6 (lower is better) Translates to: HGQKWPPQYSSH*FLQQLQLFPHC Trigger: ACAATGAGGAAACAGCTGCAGCTGCTGAAGGAAGCAATGTGATGAGTACTGAGGAGGCCACTTTTGACCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS GCA 72 bp | CTGGGAGTAAAACTGCTGCAGGAAGGGCTTTTTGACTaGAGGCATCACAGCATCCAAATGTGGCTGAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: LGVKLLQEGLFD*RHHSIQMWLKE Trigger: TTCCTTCAGCCACATTTGGATGCTGTGATGCCTGCAGTCAAAAAGCCCTTCCTGCAGCAGTTTTACTCCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CCA 72 bp | GCTATTAATCAACTCTTGCTCAGCTTGAGGGTCGCTTaGCTGTTCTCGAAGCTCCCTGAATTCCTCCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: AINQLLLSLRVA*LFSKLPEFLLS Trigger: GGAAAGGAGGAATTCAGGGAGCTTCGAGAACAGCCAAGCGACCCTCAAGCTGAGCAAGAGTTGATTAATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CCA 72 bp | GGGCTTTTTGACTGCAGGCATCACAGCATCCAAATGTaGCTGAAGGAACTCAAACTGCTCAGCCAAGAACAC | + |
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Preference number: 6 (lower is better) Translates to: GLFDCRHHSIQM*LKELKLLSQEH Trigger: GTGTTCTTGGCTGAGCAGTTTGAGTTCCTTCAGCCACATTTGGATGCTGTGATGCCTGCAGTCAAAAAGCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS TCA 72 bp | TCAGCACACCAACCCGTGTTCTTACCCTGTGCTCTTTaGTCCAACGCTCCATGTCATTCTCAGTTAGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: SAHQPVFLPCAL*SNAPCHSQLGS Trigger: ACTACCTAACTGAGAATGACATGGAGCGTTGGATCAAAGAGCACAGGGTAAGAACACGGGTTGGTGTGCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
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| CDS GCA 72 bp | CTCCTCAGTACTCATCACATTGCTTCCTTCAGCAGCTaGAGCTGTTTCCTCATTGTCATGTTTCTCGTGCCA | + |
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Preference number: 6 (lower is better) Translates to: LLSTHHIASFSS*SCFLIVMFLVP Trigger: TGGCACGAGAAACATGACAATGAGGAAACAGCTGCAGCTGCTGAAGGAAGCAATGTGATGAGTACTGAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS GCA 72 bp | GACAAGATCAGCACACCAACCCGTGTTCTTACCCTGTaGTCTTTGATCCAACGCTCCATGTCATTCTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: DKISTPTRVLTL*SLIQRSMSFSV Trigger: AACTGAGAATGACATGGAGCGTTGGATCAAAGAGCACAGGGTAAGAACACGGGTTGGTGTGCTGATCTTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170873.10 |
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| CDS TCA 72 bp | GCAGATGACAGCAGCCAACTGAAGACCTGTCTGCAGTaGTGTGACTCTTTCAAGTTCCTTTACATAAGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ADDSSQLKTCLQ*CDSFKFLYISR Trigger: CCTGCTTATGTAAAGGAACTTGAAAGAGTCACATCACTGCAGACAGGTCTTCAGTTGGCTGCTGTCATCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS TCA 72 bp | GCACAACCTGAAATACGGTGTTGTGAATGGCTTGAGTaGAGTGCATATGAAGCTGATCCATCGCAGTCTGTG | + |
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Preference number: 6 (lower is better) Translates to: AQPEIRCCEWLE*SAYEADPSQSV Trigger: CACAGACTGCGATGGATCAGCTTCATATGCACTTCACTCAAGCCATTCACAACACCGTATTTCAGGTTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS GCA 72 bp | AACAAAGTCACAGGCTTTGAAGAAGTTGCTGATGGCTaGTTACTAGGTGAAACTGATGGGGAGCGAGACTGT | + |
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Preference number: 6 (lower is better) Translates to: NKVTGFEEVADG*LLGETDGERDC Trigger: ACAGTCTCGCTCCCCATCAGTTTCACCTAGTAAGCAGCCATCAGCAACTTCTTCAAAGCCTGTGACTTTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CAA 72 bp | GCCAAGCACAACCTGAAATACGGTGTTGTGAATGGCTaGAGTGAAGTGCATATGAAGCTGATCCATCGCAGT | + |
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Preference number: 6 (lower is better) Translates to: AKHNLKYGVVNG*SEVHMKLIHRS Trigger: ACTGCGATGGATCAGCTTCATATGCACTTCACTCAAGCCATTCACAACACCGTATTTCAGGTTGTGCTTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CAA 90 bp | CTCCACATAGCCAAGCACAACCTGAAATACGGTGTTGTGAATGGCTaGAGTGAAGTGCATATGAAGCTGATCCATCGCAGTCTGTGTTTT | + |
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Preference number: 6 (lower is better) Translates to: LHIAKHNLKYGVVNG*SEVHMKLIHRSLCF Trigger: AAAACACAGACTGCGATGGATCAGCTTCATATGCACTTCACTCAAGCCATTCACAACACCGTATTTCAGGTTGTGCTTGGCTATGTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS TCA 72 bp | TTTTTGACTGCAGGCATCACAGCATCCAAATGTGGCTaGAGGAACTCAAACTGCTCAGCCAAGAACACTAAG | + |
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Preference number: 6 (lower is better) Translates to: FLTAGITASKCG*RNSNCSAKNTK Trigger: CTTAGTGTTCTTGGCTGAGCAGTTTGAGTTCCTTCAGCCACATTTGGATGCTGTGATGCCTGCAGTCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS TCA 72 bp | TGGTCAACTGCTTCGTTGAGTATTCCCTGTGCTCTTTaGTCCAACGCTCCATGTCATTCTCAGTTAGGTAGT | + |
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Preference number: 6 (lower is better) Translates to: WSTASLSIPCAL*SNAPCHSQLGS Trigger: ACTACCTAACTGAGAATGACATGGAGCGTTGGATCAAAGAGCACAGGGAATACTCAACGAAGCAGTTGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000001412.17 |
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| CDS CCA 72 bp | TTTGCACAGGTCTGCCAGGCATGGAATATAGCTGTCTaGTGTCACATGCGTACAGAGATCTTTATACTGAAG | + |
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Preference number: 6 (lower is better) Translates to: FAQVCQAWNIAV*CHMRTEIFILK Trigger: CTTCAGTATAAAGATCTCTGTACGCATGTGACACCAGACAGCTATATTCCATGCCTGGCAGACCTGTGCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CCA 72 bp | GCTCTAACTTCTTCTTTACATAGCCACGGTCAAAAGTaGCCTCCTCAGTACTCATCACATTGCTTCCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: ALTSSLHSHGQK*PPQYSSHCFLQ Trigger: CTGAAGGAAGCAATGTGATGAGTACTGAGGAGGCCACTTTTGACCGTGGCTATGTAAAGAAGAAGTTAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CCA 72 bp | ACTCAAACTGCTCAGCCAAGAACACTAAGGATTCTGTaGCTACCACTCTCTCTGCCAACCCATACAATGTAT | + |
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Preference number: 6 (lower is better) Translates to: TQTAQPRTLRIL*LPLSLPTHTMY Trigger: ATACATTGTATGGGTTGGCAGAGAGAGTGGTAGCCACAGAATCCTTAGTGTTCTTGGCTGAGCAGTTTGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CAA 72 bp | GCGTACAGAGATCTTTATACTGAAGCTTCTGGAATTTaGTATCCGTGTTTCCTGCACACAGCTCCACATAGC | + |
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Preference number: 6 (lower is better) Translates to: AYRDLYTEASGI*YPCFLHTAPHS Trigger: GCTATGTGGAGCTGTGTGCAGGAAACACGGATACAAAATTCCAGAAGCTTCAGTATAAAGATCTCTGTACGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CAA 90 bp | AGAAAAATAGACTTGTTCAATGCTATTAATCAACTCTTGCTCAGCTaGAGGGTCGCTTGGCTGTTCTCGAAGCTCCCTGAATTCCTCCTT | + |
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Preference number: 6 (lower is better) Translates to: RKIDLFNAINQLLLS*RVAWLFSKLPEFLL Trigger: AAGGAGGAATTCAGGGAGCTTCGAGAACAGCCAAGCGACCCTCAAGCTGAGCAAGAGTTGATTAATAGCATTGAACAAGTCTATTTTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CAA 90 bp | GACTCATACCCATTAGAGGCTAAGACATCTTCAGTTTCTTCATCTTaGTGGTCGGCTTGTATTTCAAATGGATTCCCACCACTGCAGTAC | + |
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Preference number: 6 (lower is better) Translates to: DSYPLEAKTSSVSSS*WSACISNGFPPLQY Trigger: GTACTGCAGTGGTGGGAATCCATTTGAAATACAAGCCGACCACAAAGATGAAGAAACTGAAGATGTCTTAGCCTCTAATGGGTATGAGTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS TCA 72 bp | CTGTCTGGTGTCACATGCGTACAGAGATCTTTATACTaGAGCTTCTGGAATTTTGTATCCGTGTTTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: LSGVTCVQRSLY*SFWNFVSVFPA Trigger: TGCAGGAAACACGGATACAAAATTCCAGAAGCTTCAGTATAAAGATCTCTGTACGCATGTGACACCAGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS GCA 72 bp | GCTTGTATTTCAAATGGATTCCCACCACTGCAGTACTaGTCAAACAAAGTCACAGGCTTTGAAGAAGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: ACISNGFPPLQY*SNKVTGFEEVA Trigger: AGCAACTTCTTCAAAGCCTGTGACTTTGTTTGAGCAGTACTGCAGTGGTGGGAATCCATTTGAAATACAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CAA 72 bp | ATCAAGGCACGCCCCTCATTACTGCATTTCTTGACATaGGCGTATCCTTCCACAATAGTTCTGTTAGCTAAT | + |
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Preference number: 6 (lower is better) Translates to: IKARPSLLHFLT*AYPSTIVLLAN Trigger: ATTAGCTAACAGAACTATTGTGGAAGGATACGCCAATGTCAAGAAATGCAGTAATGAGGGGCGTGCCTTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CAA 72 bp | AATTGCATCAAGGCACGCCCCTCATTACTGCATTTCTaGACATTGGCGTATCCTTCCACAATAGTTCTGTTA | + |
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Preference number: 6 (lower is better) Translates to: NCIKARPSLLHF*TLAYPSTIVLL Trigger: TAACAGAACTATTGTGGAAGGATACGCCAATGTCAAGAAATGCAGTAATGAGGGGCGTGCCTTGATGCAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CCA 72 bp | AGTTTCTTCATCTTTGTGGTCGGCTTGTATTTCAAATaGATTCCCACCACTGCAGTACTGCTCAAACAAAGT | + |
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Preference number: 6 (lower is better) Translates to: SFFIFVVGLYFK*IPTTAVLLKQS Trigger: ACTTTGTTTGAGCAGTACTGCAGTGGTGGGAATCCATTTGAAATACAAGCCGACCACAAAGATGAAGAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CAA 90 bp | AAGCTGATCCATCGCAGTCTGTGTTTTTCCAAGAAGCCGGTAAGCTaGCTGAACCTTGGTATAATGGTTAATGTCAAAATTCTTGCAGAT | + |
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Preference number: 6 (lower is better) Translates to: KLIHRSLCFSKKPVS*LNLGIMVNVKILAD Trigger: ATCTGCAAGAATTTTGACATTAACCATTATACCAAGGTTCAGCAAGCTTACCGGCTTCTTGGAAAAACACAGACTGCGATGGATCAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS TCA 72 bp | TTCCTTCAGCAATGCATCTACATAGATGTTGTGCTGTaGCATGATCTCTTTGACATCCCACTTCACATTCAT | + |
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Preference number: 6 (lower is better) Translates to: FLQQCIYIDVVL*HDLFDIPLHIH Trigger: ATGAATGTGAAGTGGGATGTCAAAGAGATCATGTCACAGCACAACATCTATGTAGATGCATTGCTGAAGGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CAA 72 bp | CATCGCAGTCTGTGTTTTTCCAAGAAGCCGGTAAGCTaGCTGAACCTTGGTATAATGGTTAATGTCAAAATT | + |
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Preference number: 6 (lower is better) Translates to: HRSLCFSKKPVS*LNLGIMVNVKI Trigger: AATTTTGACATTAACCATTATACCAAGGTTCAGCAAGCTTACCGGCTTCTTGGAAAAACACAGACTGCGATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CAA 90 bp | TTCATCAAGTCGTATCCTATGGTGGTTCTTGAAGTAATTGACACTTaGTTTTCTAATGGACTCCTGCAAAACTTCAGACTTGCTACCACA | + |
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Preference number: 6 (lower is better) Translates to: FIKSYPMVVLEVIDT*FSNGLLQNFRLATT Trigger: TGTGGTAGCAAGTCTGAAGTTTTGCAGGAGTCCATTAGAAAACAAAGTGTCAATTACTTCAAGAACCACCATAGGATACGACTTGATGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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| CDS CCA 72 bp | AGGAAGCTTCTCCAGCTCATATTTAACAATATCAAATaGATCCGCAGAAAAATAGACTTGTTCAATGCTATT | + |
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Preference number: 6 (lower is better) Translates to: RKLLQLIFNNIK*IRRKIDLFNAI Trigger: AATAGCATTGAACAAGTCTATTTTTCTGCGGATCCATTTGATATTGTTAAATATGAGCTGGAGAAGCTTCCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000001412.17 ENSMUST00000164052.5 ENSMUST00000170873.10 |
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