Pregenerated sensors for VPS45 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015747Ensembl transcript IDs: ENSMUST00000015891.6
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAAAGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTaGGCTCATCGTCGGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: TKSVFIPYTITSGSG*AHRRLAVPGSVPAV Trigger: GACTGCTGGAACAGACCCCGGGACTGCGAGCCGACGATGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| 3UTR CCA 90 bp | TGTCAAATACACAAAGAGTGTGTTTATTCCATACACAATCACAAGTaGGTCGGGGTGGGCTCATCGTCGGCTCGCAGTCCCGGGGTCTGT | + |
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Preference number: 1 (lower is better) Translates to: CQIHKECVYSIHNHK*VGVGSSSARSPGVC Trigger: ACAGACCCCGGGACTGCGAGCCGACGATGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTTGTGTATTTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| 3UTR-3UTR CCA 90 bp | ATACACAAAGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTGGGCCAGCCCCAAAGCCCCTaGTCAGCAGGGAAGGGCCGA | + |
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Preference number: 2 (lower is better) Translates to: IHKECVYSIHNHKWVGVGQPQSP*SAGKGR Trigger: TCGGCCCTTCCCTGCTGACCAGGGGCTTTGGGGCTG...GCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTTGTGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| 3UTR TCA 72 bp | CTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGTaGGTCAGAGCAAACACAAGGGCCAGCCCCAAAGCC | + |
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Preference number: 3 (lower is better) Translates to: LFQQSRNRGYLE*VRANTRASPKA Trigger: GGCTTTGGGGCTGGCCCTTGTGTTTGCTCTGACTCACTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| 3UTR CCA 72 bp | GTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTaGGCTCATCGTCGGCTCGCAGTCCCGGGGTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: VFIPYTITSGSG*AHRRLAVPGSV Trigger: AACAGACCCCGGGACTGCGAGCCGACGATGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| 3UTR CCA 72 bp | CACAAAGAGTGTGTTTATTCCATACACAATCACAAGTaGGTCGGGGTGGGCTCATCGTCGGCTCGCAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: HKECVYSIHNHK*VGVGSSSARSP Trigger: GGGACTGCGAGCCGACGATGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR GCA 90 bp | GGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGCCTGCGAGCTCTCCCTaGTGCGGCTGTGCAGCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GSQSRGLFQQSRNRGYLEPASSP*CGCAAQ Trigger: CTGGGCTGCACAGCCGCAGCAGGGAGAGCTCGCAGG...CTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR GCA 90 bp | CTCATCGTCGGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTGCGAGCTCTCCCTGCTaGGGCTGTGCAGCCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: LIVGSQSRGLFQQSRNRGASSPC*GCAAQK Trigger: CTTCTGGGCTGCACAGCCGCAGCAGGGAGAGCTCGC...ACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCCGACGATGAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CCA 90 bp | CTCATCGTCGGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTTGCTGACCTTGAGGTaGCCTGCGAGCTCTCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LIVGSQSRGLFQQSRNRGLLTLR*PASSPC Trigger: GCAGGGAGAGCTCGCAGGCCACCTCAAGGTCAGCAA...ACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCCGACGATGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR GCA 90 bp | CTCATCGTCGGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTGTCCTGGCAGGCTGTTaGTGCTGTGGCGCTCGTAAT | + |
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Preference number: 4 (lower is better) Translates to: LIVGSQSRGLFQQSRNRGVLAGC*CCGARN Trigger: ATTACGAGCGCCACAGCAGCAACAGCCTGCCAGGAC...ACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCCGACGATGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR TCA 90 bp | GGAGTGAGTCAGAGCAAACACAAGGGCCAGCCCCAAAGCCCCTGGTCAGCAGGGGCAGATTCCGCTCACTaGCCAACCGAGACAGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: GVSQSKHKGQPQSPWSAGADSAH*PTETVP Trigger: GGGAACTGTCTCGGTTGGTCAGTGAGCGGAATCTGC...CCCTGCTGACCAGGGGCTTTGGGGCTGGCCCTTGTGTTTGCTCTGACTCACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CCA 90 bp | GTCGGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGTCCACTATGAGTCCTaGCAGGCTGTTGCTGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VGSQSRGLFQQSRNRGYLVHYES*QAVAAV Trigger: CACAGCAGCAACAGCCTGCCAGGACTCATAGTGGAC...CAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCCGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR GCA 90 bp | CTCATCGTCGGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTCAGCCACAACTTCCTaGTCGTCAGCTTCAGCCAGT | + |
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Preference number: 4 (lower is better) Translates to: LIVGSQSRGLFQQSRNRGSATTS*SSASAS Trigger: ACTGGCTGAAGCTGACGAGCAGGAAGTTGTGGCTGA...ACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCCGACGATGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR TCA 90 bp | GGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGCACTGTCACGTGCTTTaGGACAGTCCCAGACATCTT | + |
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Preference number: 4 (lower is better) Translates to: GSQSRGLFQQSRNRGYLEHCHVL*DSPRHL Trigger: AAGATGTCTGGGACTGTCTCAAAGCACGTGACAGTG...CTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR TCA 90 bp | GTGGGCTCATCGTCGGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCCTTCCTTTGATGAGATaGTCCAGGGTCTCATGCAGG | + |
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Preference number: 4 (lower is better) Translates to: VGSSSARSPGVCSSSPGILPLMR*SRVSCR Trigger: CCTGCATGAGACCCTGGATCATCTCATCAAAGGAAG...GATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCCGACGATGAGCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR TCA 90 bp | CTCATCGTCGGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTAACACGATGATATCCTaGGGCCTGTCTCTGAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: LIVGSQSRGLFQQSRNRGNTMIS*GLSLSV Trigger: CACACTCAGAGACAGGCCTCAGGATATCATCGTGTT...ACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCCGACGATGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR GCA 90 bp | GTCGGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGTCACTCCAGGAGTGGTaGGGTTCAGGTTATAGACTG | + |
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Preference number: 4 (lower is better) Translates to: VGSQSRGLFQQSRNRGYLSLQEW*GSGYRL Trigger: CAGTCTATAACCTGAACCGCACCACTCCTGGAGTGA...CAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCCGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR TCA 90 bp | GTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGTGAGTCAGTCATGGACCATGGCCTaGTATGTCCACTGGTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: VPGSVPAVQESGLPGVSQSWTMA*YVHWLS Trigger: GCTCAACCAGTGGACATATCAGGCCATGGTCCATGA...CTGACTCACTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CCA 90 bp | GGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGGTAGTTCATGGACCATaGCCTGATATGTCCACTGGT | + |
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Preference number: 4 (lower is better) Translates to: GSQSRGLFQQSRNRGYLEVVHGP*PDMSTG Trigger: ACCAGTGGACATATCAGGCCATGGTCCATGAACTAC...CTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR TCA 90 bp | GGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGTCGTTTCTTTATCCATaGGAAGTACCTTCATGCCCG | + |
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Preference number: 4 (lower is better) Translates to: GSQSRGLFQQSRNRGYLESFLYP*EVPSCP Trigger: CGGGCATGAAGGTACTTCTCATGGATAAAGAAACGA...CTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR TCA 90 bp | GCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGTCTAGAATGGTCATTCTaGCAGGCCAGTTCTTGCTCA | + |
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Preference number: 4 (lower is better) Translates to: ARSPGVCSSSPGIGVTWSLEWSF*QASSCS Trigger: TGAGCAAGAACTGGCCTGTCAGAATGACCATTCTAG...ACTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CCA 90 bp | GCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGTGTCGTTCTTGATAGCTaGGCTGGATCCCAATTTCGA | + |
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Preference number: 4 (lower is better) Translates to: ARSPGVCSSSPGIGVTWSVVLDS*AGSQFR Trigger: TCGAAATTGGGATCCAGCCCAGCTATCAAGAACGAC...ACTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR TCA 90 bp | CGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGTGAGCTCTTAAGTCTTTGCTaGTTCCTGGCACTCTGGAAA | + |
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Preference number: 4 (lower is better) Translates to: RSPGVCSSSPGIGVTWSELLSLC*FLALWK Trigger: TTTCCAGAGTGCCAGGAATCAGCAAAGACTTAAGAG...CTCACTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR TCA 90 bp | GCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGTGAGTTTCTTGCTCAACTTCTaGAACCTCCAGCAGATTCCG | + |
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Preference number: 4 (lower is better) Translates to: AVPGSVPAVQESGLPGVSFLLNF*NLQQIP Trigger: CGGAATCTGCTGGAGGTTTCAGAAGTTGAGCAAGAA...ACTCACTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR TCA 90 bp | GGAGTGAGTCAGAGCAAACACAAGGGCCAGCCCCAAAGCCCCTGGTCAGCAGGGCTTCTGAAGAATCTCTaGCTGTGTGTAGACCATACT | + |
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Preference number: 4 (lower is better) Translates to: GVSQSKHKGQPQSPWSAGLLKNL*LCVDHT Trigger: AGTATGGTCTACACACAGTCAGAGATTCTTCAGAAG...CCCTGCTGACCAGGGGCTTTGGGGCTGGCCCTTGTGTTTGCTCTGACTCACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR TCA 90 bp | CGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGTGAGAGGTATACTTCCTTCTaGAGAATCTCTGACTGTGTG | + |
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Preference number: 4 (lower is better) Translates to: RSPGVCSSSPGIGVTWSERYTSF*RISDCV Trigger: CACACAGTCAGAGATTCTTCAGAAGGAAGTATACCT...CTCACTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR TCA 90 bp | GAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTGGGCTCATCGTCGCCTGAGGCCTGTCTCTaGGTGTGCTGGGGCCTAAAT | + |
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Preference number: 4 (lower is better) Translates to: ECVYSIHNHKWVGVGSSSPEACL*VCWGLN Trigger: ATTTAGGCCCCAGCACACTCAGAGACAGGCCTCAGG...CGACGATGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR GCA 90 bp | GGAGTGAGTCAGAGCAAACACAAGGGCCAGCCCCAAAGCCCCTGGTCAGCAGGGAAAGGCCTTCATGTCTaGTATGGATTCCAGCTTTTG | + |
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Preference number: 4 (lower is better) Translates to: GVSQSKHKGQPQSPWSAGKGLHV*YGFQLL Trigger: CAAAAGCTGGAATCCATAGCAGACATGAAGGCCTTT...CCCTGCTGACCAGGGGCTTTGGGGCTGGCCCTTGTGTTTGCTCTGACTCACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CCA 90 bp | GGAGTGAGTCAGAGCAAACACAAGGGCCAGCCCCAAAGCCCCTGGTCAGCAGGGGTCTTTGCTGATTCCTaGCACTCTGGAAAGATCAAT | + |
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Preference number: 4 (lower is better) Translates to: GVSQSKHKGQPQSPWSAGVFADS*HSGKIN Trigger: ATTGATCTTTCCAGAGTGCCAGGAATCAGCAAAGAC...CCCTGCTGACCAGGGGCTTTGGGGCTGGCCCTTGTGTTTGCTCTGACTCACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CCA 90 bp | GGAGTGAGTCAGAGCAAACACAAGGGCCAGCCCCAAAGCCCCTGGTCAGCAGGGCTTTTGCTGCTCTTTTaGTCTCTTCTTCTGGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: GVSQSKHKGQPQSPWSAGLLLLF*SLLLEV Trigger: GACTTCCAGAAGAAGAGACCAAAAGAGCAGCAAAAG...CCCTGCTGACCAGGGGCTTTGGGGCTGGCCCTTGTGTTTGCTCTGACTCACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR TCA 90 bp | GGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGATGATCTCTCGATTTTaGGAATCAATTCGTTCGAAG | + |
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Preference number: 4 (lower is better) Translates to: GSQSRGLFQQSRNRGYLEMISRF*ESIRSK Trigger: CTTCGAACGAATTGATTCTCAAAATCGAGAGATCAT...CTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR GCA 90 bp | GTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGTGAGTCAGACCATATTCAACAACTaGCGACACAAGCTTCCGATA | + |
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Preference number: 4 (lower is better) Translates to: VPGSVPAVQESGLPGVSQTIFNN*RHKLPI Trigger: TATCGGAAGCTTGTGTCGGCAGTTGTTGAATATGGT...CTGACTCACTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR GCA 90 bp | TGGAGTGAGTCAGAGCAAACACAAGGGCCAGCCCCAAAGCCCCTGGTCAGCAGGAGTCCTTTGAGAAACTaGTTGGTAATAGCCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: WSESEQTQGPAPKPLVSRSPLRN*LVIATA Trigger: TGCTGTGGCTATTACCAAGCAGTTTCTCAAAGGACT...CCTGCTGACCAGGGGCTTTGGGGCTGGCCCTTGTGTTTGCTCTGACTCACTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CCA 90 bp | GTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGTGAGTCAGTCATGCAGGAAAGGCTaGTGCTGTGTATACACATTT | + |
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Preference number: 4 (lower is better) Translates to: VPGSVPAVQESGLPGVSQSCRKG*CCVYTF Trigger: AAATGTGTATACACAGCACCAGCCTTTCCTGCATGA...CTGACTCACTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CCA 90 bp | GCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGTGAGAGAAAACAAATGTaGATTCACCGCAATGTAATC | + |
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Preference number: 4 (lower is better) Translates to: ARSPGVCSSSPGIGVTWSERKQM*IHRNVI Trigger: GATTACATTGCGGTGAATCCACATTTGTTTTCTCTC...ACTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CCA 90 bp | TTACCTGGAGTGAGTCAGAGCAAACACAAGGGCCAGCCCCAAAGCCCCTGGTCACCTTCATGTCTGCTATaGATTCCAGCTTTTGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LPGVSQSKHKGQPQSPWSPSCLL*IPAFAA Trigger: AGCAGCAAAAGCTGGAATCCATAGCAGACATGAAGG...TGACCAGGGGCTTTGGGGCTGGCCCTTGTGTTTGCTCTGACTCACTCCAGGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR GCA 90 bp | TTACCTGGAGTGAGTCAGAGCAAACACAAGGGCCAGCCCCAAAGCCCCTGGTCAGATTCCAGCTTTTGCTaGTCTTTTGGTCTCTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: LPGVSQSKHKGQPQSPWSDSSFC*SFGLFF Trigger: GAAGAAGAGACCAAAAGAGCAGCAAAAGCTGGAATC...TGACCAGGGGCTTTGGGGCTGGCCCTTGTGTTTGCTCTGACTCACTCCAGGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR GCA 90 bp | GAATCGGGGTTACCTGGAGTGAGTCAGAGCAAACACAAGGGCCAGCCCCAAAGCATGGATTCCAGCTTTTaGTGCTCTTTTGGTCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: ESGLPGVSQSKHKGQPQSMDSSF*CSFGLF Trigger: GAAGAGACCAAAAGAGCAGCAAAAGCTGGAATCCAT...GCTTTGGGGCTGGCCCTTGTGTTTGCTCTGACTCACTCCAGGTAACCCCGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR GCA 90 bp | AAAGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTGGGCTCATCGCCGACCACTGTCACGTaGTTTGAGACAGTCCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: KECVYSIHNHKWVGVGSSPTTVT*FETVPD Trigger: GTCTGGGACTGTCTCAAAGCACGTGACAGTGGTCGG...CGATGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR GCA 90 bp | GAATCGGGGTTACCTGGAGTGAGTCAGAGCAAACACAAGGGCCAGCCCCAAAGCCATCACCAGGCGAACTaGATCAAATTCTGTGACTTT | + |
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Preference number: 4 (lower is better) Translates to: ESGLPGVSQSKHKGQPQSHHQAN*IKFCDF Trigger: AAAGTCACAGAATTTGATGCAGTTCGCCTGGTGATG...GCTTTGGGGCTGGCCCTTGTGTTTGCTCTGACTCACTCCAGGTAACCCCGATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR GCA 90 bp | GCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGTGAGTTCTTTACTTATCACTTaGTTAACACATTCTCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: AVPGSVPAVQESGLPGVSSLLIT*LTHSPS Trigger: ACTGGGAGAATGTGTTAAGCAAGTGATAAGTAAAGA...ACTCACTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CCA 90 bp | AAAGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTGGGCTCATCGGGTCTTCGGAGCTCCTaGATCAGATATTCCACATTC | + |
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Preference number: 4 (lower is better) Translates to: KECVYSIHNHKWVGVGSSGLRSS*IRYSTF Trigger: GAATGTGGAATATCTGATCCAGGAGCTCCGAAGACC...CGATGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR TCA 90 bp | AAAGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTGGGCTCATCGTCCCAATTTCGACCCTaGCAGCAACCCAAAATATTG | + |
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Preference number: 4 (lower is better) Translates to: KECVYSIHNHKWVGVGSSSQFRP*QQPKIL Trigger: CAATATTTTGGGTTGCTGTCAGGGTCGAAATTGGGA...CGATGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR GCA 90 bp | AAAGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTGGGCTCATCGGTGACTTTCGGATTCTaGAGGAGTCTCTTCACATTC | + |
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Preference number: 4 (lower is better) Translates to: KECVYSIHNHKWVGVGSSVTFGF*RSLFTF Trigger: GAATGTGAAGAGACTCCTGCAGAATCCGAAAGTCAC...CGATGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CCA 90 bp | TATTCCATACACAATCACAAGTGGGTCGGGGTGGGCTCATCGTCGGCTCGCAGTTGTCCTCTATCATTTTaGAAATATACTGCTTCACAG | + |
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Preference number: 4 (lower is better) Translates to: YSIHNHKWVGVGSSSARSCPLSF*KYTASQ Trigger: CTGTGAAGCAGTATATTTCCAAAATGATAGAGGACA...ACTGCGAGCCGACGATGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CCA 90 bp | AAAGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTGGGCTCATCGAATATATGCTGTACTTaGGTCTTCGGAGCTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KECVYSIHNHKWVGVGSSNICCT*VFGAPG Trigger: TCCAGGAGCTCCGAAGACCCAAGTACAGCATATATT...CGATGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR TCA 90 bp | AAAGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTGGGCTCATCGAGTCTCTTCACATTCTaGAGAGCACTAGAATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KECVYSIHNHKWVGVGSSSLFTF*RALEWS Trigger: TGACCATTCTAGTGCTCTTCAGAATGTGAAGAGACT...CGATGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CCA 90 bp | GTCAAATACACAAAGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTCCTCACTCCAGGAGTaGTGCGGTTCAGGTTATAGA | + |
|
Preference number: 4 (lower is better) Translates to: VKYTKSVFIPYTITSGSGSSLQE*CGSGYR Trigger: TCTATAACCTGAACCGCACCACTCCTGGAGTGAGGA...CCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTTGTGTATTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
||
| CDS-3UTR GCA 90 bp | GTCAAATACACAAAGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTCCGGTTGTTGTTTATaGCCAGTAGTTCATGGACCA | + |
|
Preference number: 4 (lower is better) Translates to: VKYTKSVFIPYTITSGSGSGCCL*PVVHGP Trigger: TGGTCCATGAACTACTGGGCATAAACAACAACCGGA...CCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTTGTGTATTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CCA 90 bp | AAATACACAAAGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTGGGCTGATAACGAATCATaGGGCACTTCTTCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KYTKSVFIPYTITSGSGWADNES*GTSSET Trigger: TGTCTCTGAAGAAGTGCCCCATGATTCGTTATCAGC...CCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTTGTGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR TCA 90 bp | GTCAAATACACAAAGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTCTGGAAGTCTTCCATaGGATTCTTTATATTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: VKYTKSVFIPYTITSGSGSGSLP*DSLYCY Trigger: GTAGCAATATAAAGAATCTCATGGAAGACTTCCAGA...CCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTTGTGTATTTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS GCA 90 bp | ATCTTCTGTTTGCTGACCTTGAGGTGGCCTGCGAGCTCTCCCTGCTaGGGCTGTGCAGCCCAGAAGCCAGGACTTCCTCTAGGAAGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IFCLLTLRWPASSPC*GCAAQKPGLPLGSF Trigger: AAAGCTTCCTAGAGGAAGTCCTGGCTTCTGGGCTGCACAGCCGCAGCAGGGAGAGCTCGCAGGCCACCTCAAGGTCAGCAAACAGAAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CAA 90 bp | GTCGGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGAAATATATGCTGTACTaGGGTCTTCGGAGCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VGSQSRGLFQQSRNRGYLKYMLY*GLRSSW Trigger: CCAGGAGCTCCGAAGACCCAAGTACAGCATATATTT...CAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CAA 90 bp | CTCATCGTCGGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTCCTTTGAGAAACTGCTaGGTAATAGCCACAGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: LIVGSQSRGLFQQSRNRGPLRNC*VIATAS Trigger: AGATGCTGTGGCTATTACCAAGCAGTTTCTCAAAGG...ACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCCGACGATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CAA 90 bp | GTCGGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGAGATCAATCCGGTTGTaGTTTATGCCCAGTAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VGSQSRGLFQQSRNRGYLRSIRL*FMPSSS Trigger: TGAACTACTGGGCATAAACAACAACCGGATTGATCT...CAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCCGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CAA 90 bp | GAATCGGGGTTACCTGGAGTGAGTCAGAGCAAACACAAGGGCCAGCCCCAAAGCCCACTGTCACGTGCTTaGAGACAGTCCCAGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: ESGLPGVSQSKHKGQPQSPLSRA*RQSQTS Trigger: AGATGTCTGGGACTGTCTCAAAGCACGTGACAGTGG...GCTTTGGGGCTGGCCCTTGTGTTTGCTCTGACTCACTCCAGGTAACCCCGATTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CAA 90 bp | GGCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGAGGAAGCTTTTTGTGTaGTGTATTGTTGTTCCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GSQSRGLFQQSRNRGYLERKLFV*CIVVPP Trigger: GGGAGGAACAACAATACACAACACAAAAAGCTTCCT...CTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CAA 90 bp | GGAGTGAGTCAGAGCAAACACAAGGGCCAGCCCCAAAGCCCCTGGTCAGCAGGGGAAAGATCAATCCGGTaGTTGTTTATGCCCAGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GVSQSKHKGQPQSPWSAGERSIR*LFMPSS Trigger: ACTACTGGGCATAAACAACAACCGGATTGATCTTTC...CCCTGCTGACCAGGGGCTTTGGGGCTGGCCCTTGTGTTTGCTCTGACTCACTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS TCA 90 bp | CCAGTTCTTGCTCAACTTCTGAAACCTCCAGCAGATTCCGCTCACTaGCCAACCGAGACAGTTCCCCGACCACTGTCACGTGCTTTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PVLAQLLKPPADSAH*PTETVPRPLSRALR Trigger: TCTCAAAGCACGTGACAGTGGTCGGGGAACTGTCTCGGTTGGTCAGTGAGCGGAATCTGCTGGAGGTTTCAGAAGTTGAGCAAGAACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
||
| CDS-3UTR CAA 90 bp | AGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTGGGCTCATCGTCGCCCTTGAGTCGTTCTaGATAGCTGGGCTGGATCCC | + |
|
Preference number: 5 (lower is better) Translates to: RVCLFHTQSQVGRGGLIVALESF*IAGLDP Trigger: GGGATCCAGCCCAGCTATCAAGAACGACTCAAGGGC...GACGATGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS TCA 90 bp | TCAATCCGGTTGTTGTTTATGCCCAGTAGTTCATGGACCATGGCCTaGTATGTCCACTGGTTGAGCAGCGGGGTAATGGCGTCATCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SIRLLFMPSSSWTMA*YVHWLSSGVMASSQ Trigger: CTGCGATGACGCCATTACCCCGCTGCTCAACCAGTGGACATATCAGGCCATGGTCCATGAACTACTGGGCATAAACAACAACCGGATTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
||
| CDS-3UTR CAA 90 bp | GCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGTCATGATCTCTCGATTTaGAGAATCAATTCGTTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: ARSPGVCSSSPGIGVTWSHDLSI*RINSFE Trigger: TTCGAACGAATTGATTCTCAAAATCGAGAGATCATG...ACTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CAA 90 bp | GCTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGTCAGCAACCCAAAATATaGAGAGAAAACAAATGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ARSPGVCSSSPGIGVTWSQQPKI*RENKCG Trigger: TCCACATTTGTTTTCTCTCAATATTTTGGGTTGCTG...ACTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CAA 90 bp | CTCGCAGTCCCGGGGTCTGTTCCAGCAGTCCAGGAATCGGGGTTACCTGGAGTGATGAGATTCTTTATATaGCTACCAATCTCGGCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LAVPGSVPAVQESGLPGVMRFFI*LPISAK Trigger: CTTTGCCGAGATTGGTAGCAATATAAAGAATCTCAT...CACTCCAGGTAACCCCGATTCCTGGACTGCTGGAACAGACCCCGGGACTGCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CAA 90 bp | TATTCCATACACAATCACAAGTGGGTCGGGGTGGGCTCATCGTCGGCTCGCAGTATAGCCACAGCATCTTaGGGACTGAAGAGGTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: YSIHNHKWVGVGSSSARSIATAS*GLKRSL Trigger: AAGTGACCTCTTCAGTCCCAAAGATGCTGTGGCTAT...ACTGCGAGCCGACGATGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS GCA 90 bp | TGTGTATTGTTGTTCCTCCCAGAACGATCCTCACTCCAGGAGTGGTaGGGTTCAGGTTATAGACTGTCAGAGCCTCTTCATAGGTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CVLLFLPERSSLQEW*GSGYRLSEPLHRWL Trigger: GAGCCACCTATGAAGAGGCTCTGACAGTCTATAACCTGAACCGCACCACTCCTGGAGTGAGGATCGTTCTGGGAGGAACAACAATACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
||
| CDS TCA 90 bp | AGCACTAGAATGGTCATTCTGACAGGCCAGTTCTTGCTCAACTTCTaGAACCTCCAGCAGATTCCGCTCACTGACCAACCGAGACAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: STRMVILTGQFLLNF*NLQQIPLTDQPRQF Trigger: GAACTGTCTCGGTTGGTCAGTGAGCGGAATCTGCTGGAGGTTTCAGAAGTTGAGCAAGAACTGGCCTGTCAGAATGACCATTCTAGTGCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS CCA 90 bp | CTCCCAGTCTCTTTGCAGCCTCTGATGAAAGCTGATAACGAATCATaGGGCACTTCTTCAGAGACAAAAGGAGAGCTGTCAGCCCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: LPVSLQPLMKADNES*GTSSETKGELSALE Trigger: CTCAAGGGCTGACAGCTCTCCTTTTGTCTCTGAAGAAGTGCCCCATGATTCGTTATCAGCTTTCATCAGAGGCTGCAAAGAGACTGGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS CCA 90 bp | TGTTGTGTATTGTTGTTCCTCCCAGAACGATCCTCACTCCAGGAGTaGTGCGGTTCAGGTTATAGACTGTCAGAGCCTCTTCATAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: CCVLLFLPERSSLQE*CGSGYRLSEPLHRW Trigger: CCACCTATGAAGAGGCTCTGACAGTCTATAACCTGAACCGCACCACTCCTGGAGTGAGGATCGTTCTGGGAGGAACAACAATACACAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CAA 90 bp | GAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTGGGCTCATCGTCGCTCTTTACTTATCACTaGCTTAACACATTCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: ECVYSIHNHKWVGVGSSSLFTYH*LNTFSQ Trigger: CTGGGAGAATGTGTTAAGCAAGTGATAAGTAAAGAG...CGACGATGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CAA 90 bp | ATACACAAAGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTGGGCACCTCTCTTAAGTCTTaGCTGATTCCTGGCACTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IHKECVYSIHNHKWVGVGTSLKS*LIPGTL Trigger: CAGAGTGCCAGGAATCAGCAAAGACTTAAGAGAGGT...GCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTTGTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CAA 90 bp | CACAAAGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTGGGCTCAACTCCCTTCAGTCCTTaGAGAAACTGCTTGGTAATA | + |
|
Preference number: 5 (lower is better) Translates to: HKECVYSIHNHKWVGVGSTPFSP*RNCLVI Trigger: TATTACCAAGCAGTTTCTCAAAGGACTGAAGGGAGT...TGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS TCA 90 bp | ATTCATCATTTTCAGCGGACAGGACCACCTCTCTTAAGTCTTTGCTaGTTCCTGGCACTCTGGAAAGATCAATCCGGTTGTTGTTTATGC | + |
|
Preference number: 5 (lower is better) Translates to: IHHFQRTGPPLLSLC*FLALWKDQSGCCLC Trigger: GCATAAACAACAACCGGATTGATCTTTCCAGAGTGCCAGGAATCAGCAAAGACTTAAGAGAGGTGGTCCTGTCCGCTGAAAATGATGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS TCA 90 bp | AATGTAGAGCATAAAGCATCACCAGGCGAACTGCATCAAATTCTGTaGCTTTCGGATTCTGCAGGAGTCTCTTCACATTCTGAAGAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: NVEHKASPGELHQIL*LSDSAGVSSHSEEH Trigger: GTGCTCTTCAGAATGTGAAGAGACTCCTGCAGAATCCGAAAGTCACAGAATTTGATGCAGTTCGCCTGGTGATGCTTTATGCTCTACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CAA 90 bp | AAAGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGTGGGCTCATCGCCTCTAGGAAGCTTTTaGTGTTGTGTATTGTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KECVYSIHNHKWVGVGSSPLGSF*CCVLLF Trigger: GAACAACAATACACAACACAAAAAGCTTCCTAGAGG...CGATGAGCCCACCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CAA 90 bp | GTCAAATACACAAAGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGGCTTTTGCTGCTCTTTaGGTCTCTTCTTCTGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: VKYTKSVFIPYTITSGSGAFAAL*VSSSGS Trigger: ACTTCCAGAAGAAGAGACCAAAAGAGCAGCAAAAGC...CCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTTGTGTATTTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS-3UTR CAA 90 bp | GTCAAATACACAAAGAGTGTGTTTATTCCATACACAATCACAAGTGGGTCGGGGGACTTCACGTCACTCTaGCTGATCACATTACTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: VKYTKSVFIPYTITSGSGDFTSL*LITLLK Trigger: TTTCAGTAATGTGATCAGCAAGAGTGACGTGAAGTC...CCCCGACCCACTTGTGATTGTGTATGGAATAAACACACTCTTTGTGTATTTGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS TCA 90 bp | TCTCCTTTGTGGGTCGAAGGAAACAAATTGCTTTTAGGTGTTTCATaGTCTCTCGATTTTGAGAATCAATTCGTTCGAAGAGGTATACTT | + |
|
Preference number: 5 (lower is better) Translates to: SPLWVEGNKLLLGVS*SLDFENQFVRRGIL Trigger: AAGTATACCTCTTCGAACGAATTGATTCTCAAAATCGAGAGATCATGAAACACCTAAAAGCAATTTGTTTCCTTCGACCCACAAAGGAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS TCA 72 bp | GCTCAACTTCTGAAACCTCCAGCAGATTCCGCTCACTaGCCAACCGAGACAGTTCCCCGACCACTGTCACGT | + |
|
Preference number: 6 (lower is better) Translates to: AQLLKPPADSAH*PTETVPRPLSR Trigger: ACGTGACAGTGGTCGGGGAACTGTCTCGGTTGGTCAGTGAGCGGAATCTGCTGGAGGTTTCAGAAGTTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS CAA 72 bp | GAGACAAAAGGAGAGCTGTCAGCCCTTGAGTCGTTCTaGATAGCTGGGCTGGATCCCAATTTCGACCCTGAC | + |
|
Preference number: 6 (lower is better) Translates to: ETKGELSALESF*IAGLDPNFDPD Trigger: GTCAGGGTCGAAATTGGGATCCAGCCCAGCTATCAAGAACGACTCAAGGGCTGACAGCTCTCCTTTTGTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS CAA 90 bp | ACTTCTTCAGAGACAAAAGGAGAGCTGTCAGCCCTTGAGTCGTTCTaGATAGCTGGGCTGGATCCCAATTTCGACCCTGACAGCAACCCA | + |
|
Preference number: 6 (lower is better) Translates to: TSSETKGELSALESF*IAGLDPNFDPDSNP Trigger: TGGGTTGCTGTCAGGGTCGAAATTGGGATCCAGCCCAGCTATCAAGAACGACTCAAGGGCTGACAGCTCTCCTTTTGTCTCTGAAGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS TCA 72 bp | TTGTTGTTTATGCCCAGTAGTTCATGGACCATGGCCTaGTATGTCCACTGGTTGAGCAGCGGGGTAATGGCG | + |
|
Preference number: 6 (lower is better) Translates to: LLFMPSSSWTMA*YVHWLSSGVMA Trigger: CGCCATTACCCCGCTGCTCAACCAGTGGACATATCAGGCCATGGTCCATGAACTACTGGGCATAAACAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS TCA 72 bp | ATGGTCATTCTGACAGGCCAGTTCTTGCTCAACTTCTaGAACCTCCAGCAGATTCCGCTCACTGACCAACCG | + |
|
Preference number: 6 (lower is better) Translates to: MVILTGQFLLNF*NLQQIPLTDQP Trigger: CGGTTGGTCAGTGAGCGGAATCTGCTGGAGGTTTCAGAAGTTGAGCAAGAACTGGCCTGTCAGAATGACCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS GCA 72 bp | TTGTTCCTCCCAGAACGATCCTCACTCCAGGAGTGGTaGGGTTCAGGTTATAGACTGTCAGAGCCTCTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LFLPERSSLQEW*GSGYRLSEPLH Trigger: ATGAAGAGGCTCTGACAGTCTATAACCTGAACCGCACCACTCCTGGAGTGAGGATCGTTCTGGGAGGAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS CCA 72 bp | TTGTTGTTCCTCCCAGAACGATCCTCACTCCAGGAGTaGTGCGGTTCAGGTTATAGACTGTCAGAGCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LLFLPERSSLQE*CGSGYRLSEPL Trigger: AAGAGGCTCTGACAGTCTATAACCTGAACCGCACCACTCCTGGAGTGAGGATCGTTCTGGGAGGAACAACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
||
| CDS TCA 72 bp | AGACCATACTCACTATACCAGTCGTTTCTTTATCCATaGGAAGTACCTTCATGCCCGGCCCGCTGTCCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: RPYSLYQSFLYP*EVPSCPARCPL Trigger: TAGAGGACAGCGGGCCGGGCATGAAGGTACTTCTCATGGATAAAGAAACGACTGGTATAGTGAGTATGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
||
| CDS TCA 72 bp | CACTTCTTCAGAGACAAAAGGAGAGCTGTCAGCCCTTaGGTCGTTCTTGATAGCTGGGCTGGATCCCAATTT | + |
|
Preference number: 6 (lower is better) Translates to: HFFRDKRRAVSP*VVLDSWAGSQF Trigger: AAATTGGGATCCAGCCCAGCTATCAAGAACGACTCAAGGGCTGACAGCTCTCCTTTTGTCTCTGAAGAAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
||
| CDS GCA 72 bp | CTGGCACTCTGGAAAGATCAATCCGGTTGTTGTTTATaGCCAGTAGTTCATGGACCATGGCCTGATATGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LALWKDQSGCCL*PVVHGPWPDMS Trigger: GGACATATCAGGCCATGGTCCATGAACTACTGGGCATAAACAACAACCGGATTGATCTTTCCAGAGTGCCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
||
| CDS CAA 72 bp | TTGCTGATTCCTGGCACTCTGGAAAGATCAATCCGGTaGTTGTTTATGCCCAGTAGTTCATGGACCATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLIPGTLERSIR*LFMPSSSWTMA Trigger: GGCCATGGTCCATGAACTACTGGGCATAAACAACAACCGGATTGATCTTTCCAGAGTGCCAGGAATCAGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
||
| CDS CAA 72 bp | GGACTTCCTCTAGGAAGCTTTTTGTGTTGTGTATTGTaGTTCCTCCCAGAACGATCCTCACTCCAGGAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GLPLGSFLCCVL*FLPERSSLQEW Trigger: CCACTCCTGGAGTGAGGATCGTTCTGGGAGGAACAACAATACACAACACAAAAAGCTTCCTAGAGGAAGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
||
| CDS CAA 90 bp | CCCTTCAGTCCTTTGAGAAACTGCTTGGTAATAGCCACAGCATCTTaGGGACTGAAGAGGTCACTTCCTCTAACCCGTTTACCACCATAT | + |
|
Preference number: 6 (lower is better) Translates to: PFSPLRNCLVIATAS*GLKRSLPLTRLPPY Trigger: ATATGGTGGTAAACGGGTTAGAGGAAGTGACCTCTTCAGTCCCAAAGATGCTGTGGCTATTACCAAGCAGTTTCTCAAAGGACTGAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
||
| CDS GCA 72 bp | ACTTCCTCTAACCCGTTTACCACCATATTCAACAACTaGCGACACAAGCTTCCGATACTTCTCAGCAACACC | + |
|
Preference number: 6 (lower is better) Translates to: TSSNPFTTIFNN*RHKLPILLSNT Trigger: GGTGTTGCTGAGAAGTATCGGAAGCTTGTGTCGGCAGTTGTTGAATATGGTGGTAAACGGGTTAGAGGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
||
| CDS CCA 72 bp | GTACCTTCATGCCCGGCCCGCTGTCCTCTATCATTTTaGAAATATACTGCTTCACAGCAAAGACCACATTCA | + |
|
Preference number: 6 (lower is better) Translates to: VPSCPARCPLSF*KYTASQQRPHS Trigger: TGAATGTGGTCTTTGCTGTGAAGCAGTATATTTCCAAAATGATAGAGGACAGCGGGCCGGGCATGAAGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS CAA 72 bp | CCAGAAGCCAGGACTTCCTCTAGGAAGCTTTTTGTGTaGTGTATTGTTGTTCCTCCCAGAACGATCCTCACT | + |
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Preference number: 6 (lower is better) Translates to: PEARTSSRKLFV*CIVVPPRTILT Trigger: AGTGAGGATCGTTCTGGGAGGAACAACAATACACAACACAAAAAGCTTCCTAGAGGAAGTCCTGGCTTCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS CAA 90 bp | TGTGTATACACATTTTCCACTCCCTTCAGTCCTTTGAGAAACTGCTaGGTAATAGCCACAGCATCTTTGGGACTGAAGAGGTCACTTCCT | + |
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Preference number: 6 (lower is better) Translates to: CVYTFSTPFSPLRNC*VIATASLGLKRSLP Trigger: AGGAAGTGACCTCTTCAGTCCCAAAGATGCTGTGGCTATTACCAAGCAGTTTCTCAAAGGACTGAAGGGAGTGGAAAATGTGTATACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS TCA 72 bp | CATAAAGCATCACCAGGCGAACTGCATCAAATTCTGTaGCTTTCGGATTCTGCAGGAGTCTCTTCACATTCT | + |
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Preference number: 6 (lower is better) Translates to: HKASPGELHQIL*LSDSAGVSSHS Trigger: AGAATGTGAAGAGACTCCTGCAGAATCCGAAAGTCACAGAATTTGATGCAGTTCGCCTGGTGATGCTTTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS TCA 72 bp | CTGTCACGTGCTTTGAGACAGTCCCAGACATCTTTTTaGACTGTGGATAATTTTCAACAAAGGCCTTCATGT | + |
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Preference number: 6 (lower is better) Translates to: LSRALRQSQTSF*TVDNFQQRPSC Trigger: ACATGAAGGCCTTTGTTGAAAATTATCCACAGTTCAAAAAGATGTCTGGGACTGTCTCAAAGCACGTGACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS TCA 72 bp | GATCCCAATTTCGACCCTGACAGCAACCCAAAATATTaGGAGAAAACAAATGTGGATTCACCGCAATGTAAT | + |
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Preference number: 6 (lower is better) Translates to: DPNFDPDSNPKY*EKTNVDSPQCN Trigger: ATTACATTGCGGTGAATCCACATTTGTTTTCTCTCAATATTTTGGGTTGCTGTCAGGGTCGAAATTGGGATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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| CDS TCA 72 bp | TGGGTCGAAGGAAACAAATTGCTTTTAGGTGTTTCATaGTCTCTCGATTTTGAGAATCAATTCGTTCGAAGA | + |
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Preference number: 6 (lower is better) Translates to: WVEGNKLLLGVS*SLDFENQFVRR Trigger: TCTTCGAACGAATTGATTCTCAAAATCGAGAGATCATGAAACACCTAAAAGCAATTTGTTTCCTTCGACCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015891.6 |
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