RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VPS39 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027291

Ensembl transcript IDs: ENSMUST00000028752.8, ENSMUST00000102501.10

Found 337 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGGAGAAAACACTGGCAGTATAAACAGCCTGCGGTCAGTGGGCTaGCAAGCTCTAGTGCTGGGCTCCCATGGGACTCTCCAGGCCGCC +
Preference number: 1 (lower is better)
Translates to: PGENTGSINSLRSVG*QALVLGSHGTLQAA
Trigger: GGCGGCCTGGAGAGTCCCATGGGAGCCCAGCACTAGAGCTTGCCAGCCCACTGACCGCAGGCTGTTTATACTGCCAGTGTTTTCTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR GCA 90 bp TGTGCATGTGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTaGTGTGTACCTCTTGCTCTGCGTACCTCTTGCCGGCTCCCTGAC +
Preference number: 1 (lower is better)
Translates to: CACVCLVSVASKARS*CVPLALRTSCRLPD
Trigger: GTCAGGGAGCCGGCAAGAGGTACGCAGAGCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACACATGCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR CCA 90 bp AAAGGGCAGGACTCACATGATGGCACAAGTTCTGGTCCTGTCCTATaGGGAGTGGCCTGGCATCCCAGTGCCACTCCCGAGGAAGTACAT +
Preference number: 1 (lower is better)
Translates to: KGQDSHDGTSSGPVL*GVAWHPSATPEEVH
Trigger: ATGTACTTCCTCGGGAGTGGCACTGGGATGCCAGGCCACTCCCCATAGGACAGGACCAGAACTTGTGCCATCATGTGAGTCCTGCCCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR TCA 90 bp GGGCTCCCATGGGACTCTCCAGGCCGCCATGCTGGGGGAATCTTGTaGAGCTGTGTAGTTATTGTAATAGAAAACTCACAGTCAACAACC +
Preference number: 1 (lower is better)
Translates to: GLPWDSPGRHAGGIL*SCVVIVIENSQSTT
Trigger: GGTTGTTGACTGTGAGTTTTCTATTACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGAGAGTCCCATGGGAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR CCA 90 bp TTGCCACATTTAAGCATTAGTTACTCTACCTCCCACTCTACACAGTaGGAGGGGAAGCGTGGACGGTACAAGGGAAGAGATCCAGGGGTA +
Preference number: 1 (lower is better)
Translates to: LPHLSISYSTSHSTQ*EGKRGRYKGRDPGV
Trigger: TACCCCTGGATCTCTTCCCTTGTACCGTCCACGCTTCCCCTCCCACTGTGTAGAGTGGGAGGTAGAGTAACTAATGCTTAAATGTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR CCA 90 bp CCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTATTaGTTTCTGGTCAGCTGTTCCCTGTGTGCAGTGAGACATACTTTA +
Preference number: 1 (lower is better)
Translates to: PFLSAPQTCTPSHHY*FLVSCSLCAVRHTL
Trigger: TAAAGTATGTCTCACTGCACACAGGGAACAGCTGACCAGAAACCAATAGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR TCA 90 bp GAGACTTGTGTTCTCCTACACATCTTAGTAGAAAAGTTCAGCTCCTaGGACCCTTCATACAATGTCCATGACACCTGCTCATCAGGGCCT +
Preference number: 1 (lower is better)
Translates to: ETCVLLHILVEKFSS*DPSYNVHDTCSSGP
Trigger: AGGCCCTGATGAGCAGGTGTCATGGACATTGTATGAAGGGTCTCAGGAGCTGAACTTTTCTACTAAGATGTGTAGGAGAACACAAGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR GCA 90 bp GTGAGACATACTTTACCAAGCTATCCTAGCTCGATCCTCCAGTCTTaGAGAAGAAAGGCCAAGGAACAACTATGGCCAGGAAAACAACAG +
Preference number: 1 (lower is better)
Translates to: VRHTLPSYPSSILQS*RRKAKEQLWPGKQQ
Trigger: CTGTTGTTTTCCTGGCCATAGTTGTTCCTTGGCCTTTCTTCTGCAAGACTGGAGGATCGAGCTAGGATAGCTTGGTAAAGTATGTCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR CCA 90 bp CCATGGGTACAAACACTTGAGATGAAATCTCCTTGTCCAGATGATTaGTATACAAAGGCAAGATGGTGCATTTCCTCCTGTCCAAGCAGG +
Preference number: 1 (lower is better)
Translates to: PWVQTLEMKSPCPDD*YTKARWCISSCPSR
Trigger: CCTGCTTGGACAGGAGGAAATGCACCATCTTGCCTTTGTATACCAATCATCTGGACAAGGAGATTTCATCTCAAGTGTTTGTACCCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR CCA 90 bp AGCTGTGTAGTTATTGTAATAGAAAACTCACAGTCAACAACCCCATaGGTACAAACACTTGAGATGAAATCTCCTTGTCCAGATGATTGG +
Preference number: 1 (lower is better)
Translates to: SCVVIVIENSQSTTP*VQTLEMKSPCPDDW
Trigger: CCAATCATCTGGACAAGGAGATTTCATCTCAAGTGTTTGTACCCATGGGGTTGTTGACTGTGAGTTTTCTATTACAATAACTACACAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR TCA 90 bp GTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCTCTTGTCCAAGCAGCTGGTaGGTGGCCGAGGCAGGCACT +
Preference number: 2 (lower is better)
Translates to: VPGVCSLQGQKLLCTSCSCPSSW*VAEAGT
Trigger: AGTGCCTGCCTCGGCCACTCACCAGCTGCTTGGACA...AGAGCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR TCA 90 bp ATGTGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGTCCAAGCAGCTGGTaGGTGGCCGAGGCAGGCACT +
Preference number: 2 (lower is better)
Translates to: MCVPGVCSLQGQKLLCTSCPSSW*VAEAGT
Trigger: AGTGCCTGCCTCGGCCACTCACCAGCTGCTTGGACA...AGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACACAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp ATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGTCTGGTCCTGTCCTATaGGGAGTGGCCTGGCATCCC +
Preference number: 2 (lower is better)
Translates to: IILRLELPCSLYEGQDPGSGPVL*GVAWHP
Trigger: GGGATGCCAGGCCACTCCCCATAGGACAGGACCAGA...CCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR GCA 90 bp AGAGAGATCCTGCCTAGACCACACACCCTGCACAGTGCTGCCCCGGGGAGGTACACAAAGGCAAGATGGTaGATTTCCTCCTGTCCAAGC +
Preference number: 2 (lower is better)
Translates to: REILPRPHTLHSAAPGRYTKARW*ISSCPS
Trigger: GCTTGGACAGGAGGAAATGCACCATCTTGCCTTTGT...GTACCTCCCCGGGGCAGCACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR GCA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGAGCTCTGCGTACCTCTTaGCGGCTCCCTGACATACTC +
Preference number: 2 (lower is better)
Translates to: SLGWSYPVPSMKGRILGRALRTS*RLPDIL
Trigger: GAGTATGTCAGGGAGCCGGCAAGAGGTACGCAGAGC...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp ATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAGTGCTGGGCTCCCATaGGACTCTCCAGGCCGCCAT +
Preference number: 2 (lower is better)
Translates to: IEKQPPSSLGWSYPVPSMSAGLP*DSPGRH
Trigger: ATGGCGGCCTGGAGAGTCCCATGGGAGCCCAGCACT...CATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR GCA 90 bp ATACTCAACAGAGCTGCTCCTGCATTACTCTTTGCCATTCCTCAGTGCCCCACACTAGACCACACACCCTaGACAGTGCTGCCCCGGGGA +
Preference number: 2 (lower is better)
Translates to: ILNRAAPALLFAIPQCPTLDHTP*TVLPRG
Trigger: TCCCCGGGGCAGCACTGTGCAGGGTGTGTGGTCTAG...TGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAGCAGCTCTGTTGAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR GCA 90 bp TCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTATTGGCTCTCCAGGCCGCCATaGTGGGGGAATCTTGTGAAG +
Preference number: 2 (lower is better)
Translates to: SLPFLSAPQTCTPSHHYWLSRPP*WGNLVK
Trigger: CTTCACAAGATTCCCCCAGCATGGCGGCCTGGAGAG...CCAATAGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR GCA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGATCCTGCATTACTCTTTaGCATTCCTCAGTGCCCCAC +
Preference number: 2 (lower is better)
Translates to: SLGWSYPVPSMKGRILGRSCITL*HSSVPH
Trigger: GTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGA...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR GCA 90 bp TGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCACAAAGGCAAGATGGTaGATTTCCTCCTGTCCAAGC +
Preference number: 2 (lower is better)
Translates to: CVPGVCSLQGQKLLCTSCTKARW*ISSCPS
Trigger: GCTTGGACAGGAGGAAATGCACCATCTTGCCTTTGT...GCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR GCA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGATCGATCCTCCAGTCTTaGAGAAGAAAGGCCAAGGAA +
Preference number: 2 (lower is better)
Translates to: SLGWSYPVPSMKGRILGRSILQS*RRKAKE
Trigger: TTCCTTGGCCTTTCTTCTGCAAGACTGGAGGATCGA...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR TCA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGAGAAAAGTTCAGCTCCTaGGACCCTTCATACAATGTC +
Preference number: 2 (lower is better)
Translates to: SLGWSYPVPSMKGRILGREKFSS*DPSYNV
Trigger: GACATTGTATGAAGGGTCTCAGGAGCTGAACTTTTC...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp CACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACAGTTCAAGTGCTGGGCTCCCATaGGACTCTCCAGGCCGCCAT +
Preference number: 2 (lower is better)
Translates to: HTTQEKIQALFYCFKHSSSAGLP*DSPGRH
Trigger: ATGGCGGCCTGGAGAGTCCCATGGGAGCCCAGCACT...TGAACTGTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp ATGTGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTAAGCAGGGAGACTCCTaGAGAAAACACTGGCAGTAT +
Preference number: 2 (lower is better)
Translates to: MCVPGVCSLQGQKLLCTSKQGDS*RKHWQY
Trigger: ATACTGCCAGTGTTTTCTCCAGGAGTCTCCCTGCTT...AGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp CTTATGTTTATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTGTGGGAGGGGAAGCGTaGACGGTACAAGGGAAGAGA +
Preference number: 2 (lower is better)
Translates to: LMFIEKQPPSSLGWSYPVVGGEA*TVQGKR
Trigger: TCTCTTCCCTTGTACCGTCCACGCTTCCCCTCCCAC...AACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAATAAACATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp ATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGATCACTATTGGTTTCTaGTCAGCTGTTCCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: IILRLELPCSLYEGQDPGITIGF*SAVPCV
Trigger: CACACAGGGAACAGCTGACCAGAAACCAATAGTGAT...CCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp TGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCATCACTATTGGTTTCTaGTCAGCTGTTCCCTGTGTG +
Preference number: 2 (lower is better)
Translates to: CVPGVCSLQGQKLLCTSCITIGF*SAVPCV
Trigger: CACACAGGGAACAGCTGACCAGAAACCAATAGTGAT...GCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp ATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGCCATCTCATCACTATTaGTTTCTGGTCAGCTGTTCC +
Preference number: 2 (lower is better)
Translates to: IILRLELPCSLYEGQDPGPSHHY*FLVSCS
Trigger: GGAACAGCTGACCAGAAACCAATAGTGATGAGATGG...CCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR GCA 90 bp TCATCACTATTGGTTTCTGGTCAGCTGTTCCCTGTGTGCAGTGAGACATACTTTCTCTCCAGGCCGCCATaGTGGGGGAATCTTGTGAAG +
Preference number: 2 (lower is better)
Translates to: SSLLVSGQLFPVCSETYFLSRPP*WGNLVK
Trigger: CTTCACAAGATTCCCCCAGCATGGCGGCCTGGAGAG...AAAGTATGTCTCACTGCACACAGGGAACAGCTGACCAGAAACCAATAGTGATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR GCA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGATATGGGTGTGTGGCCTaGATATATGTATGTGCATGT +
Preference number: 2 (lower is better)
Translates to: SLGWSYPVPSMKGRILGRYGCVA*IYVCAC
Trigger: ACATGCACATACATATATGCAGGCCACACACCCATA...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp ATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTAGAAAGTGGCTAGAGTaGAGGAAGATGCTCAGCGCT +
Preference number: 2 (lower is better)
Translates to: ITLCHSSVPHKPARHLITRKWLE*RKMLSA
Trigger: AGCGCTGAGCATCTTCCTCCACTCTAGCCACTTTCT...AGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR TCA 90 bp TCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTATTGGGCTGGGGGAATCTTGTaGAGCTGTGTAGTTATTGTA +
Preference number: 2 (lower is better)
Translates to: SLPFLSAPQTCTPSHHYWAGGIL*SCVVIV
Trigger: TACAATAACTACACAGCTTCACAAGATTCCCCCAGC...CCAATAGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp GGACTCTCCAGGCCGCCATGCTGGGGGAATCTTGTGAAGCTGTGTAGTTATTGTCAGGGGTTAAACTCCTaGAATTGTCTGCAACATAAC +
Preference number: 2 (lower is better)
Translates to: GLSRPPCWGNLVKLCSYCQGLNS*NCLQHN
Trigger: GTTATGTTGCAGACAATTCCAGGAGTTTAACCCCTG...ACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGAGAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp TCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTATTGGCAGTCAACAACCCCATaGGTACAAACACTTGAGATG +
Preference number: 2 (lower is better)
Translates to: SLPFLSAPQTCTPSHHYWQSTTP*VQTLEM
Trigger: CATCTCAAGTGTTTGTACCCATGGGGTTGTTGACTG...CCAATAGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp ATACTCAACAGAGCTGCTCCTGCATTACTCTTTGCCATTCCTCAGTGCCCCACAGCCAAGGAACAACTATaGCCAGGAAAACAACAGGAC +
Preference number: 2 (lower is better)
Translates to: ILNRAAPALLFAIPQCPTAKEQL*PGKQQD
Trigger: GTCCTGTTGTTTTCCTGGCCATAGTTGTTCCTTGGC...TGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAGCAGCTCTGTTGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR TCA 90 bp ATGTGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTACAAACACTTGAGATaGAATCTCCTTGTCCAGATG +
Preference number: 2 (lower is better)
Translates to: MCVPGVCSLQGQKLLCTSYKHLR*NLLVQM
Trigger: CATCTGGACAAGGAGATTTCATCTCAAGTGTTTGTA...AGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp TCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTATTGGCCTTGTCCAGATGATTaGTATACAAAGGCAAGATGG +
Preference number: 2 (lower is better)
Translates to: SLPFLSAPQTCTPSHHYWPCPDD*YTKARW
Trigger: CCATCTTGCCTTTGTATACCAATCATCTGGACAAGG...CCAATAGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR TCA 90 bp TCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTATTGGTACAAACACTTGAGATaGAATCTCCTTGTCCAGATG +
Preference number: 2 (lower is better)
Translates to: SLPFLSAPQTCTPSHHYWYKHLR*NLLVQM
Trigger: CATCTGGACAAGGAGATTTCATCTCAAGTGTTTGTA...CCAATAGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR TCA 90 bp CTTATGTTTATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTGCTGGGGGAATCTTGTaGAGCTGTGTAGTTATTGTA +
Preference number: 2 (lower is better)
Translates to: LMFIEKQPPSSLGWSYPVAGGIL*SCVVIV
Trigger: TACAATAACTACACAGCTTCACAAGATTCCCCCAGC...AACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAATAAACATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR GCA 90 bp TCATCACTATTGGTTTCTGGTCAGCTGTTCCCTGTGTGCAGTGAGACATACTTTTCGATCCTCCAGTCTTaGAGAAGAAAGGCCAAGGAA +
Preference number: 2 (lower is better)
Translates to: SSLLVSGQLFPVCSETYFSILQS*RRKAKE
Trigger: TTCCTTGGCCTTTCTTCTGCAAGACTGGAGGATCGA...AAAGTATGTCTCACTGCACACAGGGAACAGCTGACCAGAAACCAATAGTGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR GCA 90 bp AGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACTCCTGCATTACTCTTTaGCATTCCTCAGTGCCCCAC +
Preference number: 2 (lower is better)
Translates to: SMHTTQEKIQALFYCFKHSCITL*HSSVPH
Trigger: GTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGA...GTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp AGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACAGAAAGTGGCTAGAGTaGAGGAAGATGCTCAGCGCT +
Preference number: 2 (lower is better)
Translates to: SMHTTQEKIQALFYCFKHRKWLE*RKMLSA
Trigger: AGCGCTGAGCATCTTCCTCCACTCTAGCCACTTTCT...GTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp TCATCACTATTGGTTTCTGGTCAGCTGTTCCCTGTGTGCAGTGAGACATACTTTCAGTCAACAACCCCATaGGTACAAACACTTGAGATG +
Preference number: 2 (lower is better)
Translates to: SSLLVSGQLFPVCSETYFQSTTP*VQTLEM
Trigger: CATCTCAAGTGTTTGTACCCATGGGGTTGTTGACTG...AAAGTATGTCTCACTGCACACAGGGAACAGCTGACCAGAAACCAATAGTGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp CACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACAGTTCACAACAGGACAGAAAGTaGCTAGAGTGGAGGAAGATG +
Preference number: 2 (lower is better)
Translates to: HTTQEKIQALFYCFKHSSQQDRK*LEWRKM
Trigger: CATCTTCCTCCACTCTAGCCACTTTCTGTCCTGTTG...TGAACTGTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR GCA 90 bp AGGGAAACAGAATTAAGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCCAACAGAGCTGCTCCTaGATTACTCTTTGCCATTCC +
Preference number: 2 (lower is better)
Translates to: RETELSMHTTQEKIQALFQQSCS*ITLCHS
Trigger: GGAATGGCAAAGAGTAATGCAGGAGCAGCTCTGTTG...GAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACTTAATTCTGTTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp TCATCACTATTGGTTTCTGGTCAGCTGTTCCCTGTGTGCAGTGAGACATACTTTCCTTGTCCAGATGATTaGTATACAAAGGCAAGATGG +
Preference number: 2 (lower is better)
Translates to: SSLLVSGQLFPVCSETYFPCPDD*YTKARW
Trigger: CCATCTTGCCTTTGTATACCAATCATCTGGACAAGG...AAAGTATGTCTCACTGCACACAGGGAACAGCTGACCAGAAACCAATAGTGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp AGGGAAACAGAATTAAGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCGCCAAGGAACAACTATaGCCAGGAAAACAACAGGAC +
Preference number: 2 (lower is better)
Translates to: RETELSMHTTQEKIQALFAKEQL*PGKQQD
Trigger: GTCCTGTTGTTTTCCTGGCCATAGTTGTTCCTTGGC...GAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACTTAATTCTGTTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CCA 90 bp AGGGAAACAGAATTAAGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCCCATCTCATCACTATTaGTTTCTGGTCAGCTGTTCC +
Preference number: 2 (lower is better)
Translates to: RETELSMHTTQEKIQALFPSHHY*FLVSCS
Trigger: GGAACAGCTGACCAGAAACCAATAGTGATGAGATGG...GAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACTTAATTCTGTTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR CCA 72 bp GACTCACATGATGGCACAAGTTCTGGTCCTGTCCTATaGGGAGTGGCCTGGCATCCCAGTGCCACTCCCGAG +
Preference number: 3 (lower is better)
Translates to: DSHDGTSSGPVL*GVAWHPSATPE
Trigger: CTCGGGAGTGGCACTGGGATGCCAGGCCACTCCCCATAGGACAGGACCAGAACTTGTGCCATCATGTGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR TCA 72 bp CAGCCTGTCCAATCAACAGCCTGTCCAAGCAGCTGGTaGGTGGCCGAGGCAGGCACTTCTAGAGAGATCCTG +
Preference number: 3 (lower is better)
Translates to: QPVQSTACPSSW*VAEAGTSREIL
Trigger: CAGGATCTCTCTAGAAGTGCCTGCCTCGGCCACTCACCAGCTGCTTGGACAGGCTGTTGATTGGACAGGCTG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR CCA 72 bp AACACTGGCAGTATAAACAGCCTGCGGTCAGTGGGCTaGCAAGCTCTAGTGCTGGGCTCCCATGGGACTCTC +
Preference number: 3 (lower is better)
Translates to: NTGSINSLRSVG*QALVLGSHGTL
Trigger: GAGAGTCCCATGGGAGCCCAGCACTAGAGCTTGCCAGCCCACTGACCGCAGGCTGTTTATACTGCCAGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR CCA 72 bp ATGATGGCACAAGTTCTGGTCCTGTCCTATGGGGAGTaGCCTGGCATCCCAGTGCCACTCCCGAGGAAGTAC +
Preference number: 3 (lower is better)
Translates to: MMAQVLVLSYGE*PGIPVPLPRKY
Trigger: GTACTTCCTCGGGAGTGGCACTGGGATGCCAGGCCACTCCCCATAGGACAGGACCAGAACTTGTGCCATCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR CCA 72 bp CTGTCCAATCAACAGCCTGTCCAAGCAGCTGGTGAGTaGCCGAGGCAGGCACTTCTAGAGAGATCCTGCCTA +
Preference number: 3 (lower is better)
Translates to: LSNQQPVQAAGE*PRQALLERSCL
Trigger: TAGGCAGGATCTCTCTAGAAGTGCCTGCCTCGGCCACTCACCAGCTGCTTGGACAGGCTGTTGATTGGACAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR GCA 72 bp CCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCTCTaGGTACCTCTTGCCGGCTCCCTGACATACTCAACA +
Preference number: 3 (lower is better)
Translates to: PPRPEVAVYLLL*VPLAGSLTYST
Trigger: TGTTGAGTATGTCAGGGAGCCGGCAAGAGGTACGCAGAGCAAGAGGTACACAGCAACTTCTGGCCTTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CAA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGACTCGATCCTCCAGTCTaGCAGAAGAAAGGCCAAGGA +
Preference number: 3 (lower is better)
Translates to: SLGWSYPVPSMKGRILGRLDPPV*QKKGQG
Trigger: TCCTTGGCCTTTCTTCTGCAAGACTGGAGGATCGAG...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CAA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGACTCCTGCATTACTCTTaGCCATTCCTCAGTGCCCCA +
Preference number: 3 (lower is better)
Translates to: SLGWSYPVPSMKGRILGRLLHYS*PFLSAP
Trigger: TGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAG...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR GCA 72 bp AGAAGTTGCTGTGTACCTCTTGCTCTGCGTACCTCTTaGCGGCTCCCTGACATACTCAACAGAGCTGCTCCT +
Preference number: 3 (lower is better)
Translates to: RSCCVPLALRTS*RLPDILNRAAP
Trigger: AGGAGCAGCTCTGTTGAGTATGTCAGGGAGCCGGCAAGAGGTACGCAGAGCAAGAGGTACACAGCAACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR CCA 72 bp AGTCCAGTTAATTCGGAGATGTTCCAGAGAGCAAGGTaGCCAGCATCGTCCCTGGTAGCAGTGCACGGTTCT +
Preference number: 3 (lower is better)
Translates to: SPVNSEMFQRAR*PASSLVAVHGS
Trigger: AGAACCGTGCACTGCTACCAGGGACGATGCTGGCCACCTTGCTCTCTGGAACATCTCCGAATTAACTGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR-3UTR CAA 90 bp TCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTCTCCTGCATTACTCTTaGCCATTCCTCAGTGCCCCA +
Preference number: 3 (lower is better)
Translates to: SIILRLELPCSLYEGQDPLLHYS*PFLSAP
Trigger: TGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAG...AGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR CCA 72 bp GCGACTGAAAACGGAAGGGATAAGCAGGGAGACTCCTaGAGAAAACACTGGCAGTATAAACAGCCTGCGGTC +
Preference number: 3 (lower is better)
Translates to: ATENGRDKQGDS*RKHWQYKQPAV
Trigger: GACCGCAGGCTGTTTATACTGCCAGTGTTTTCTCCAGGAGTCTCCCTGCTTATCCCTTCCGTTTTCAGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR CCA 72 bp AGTGCCCCACAAACCTGCACGCCATCTCATCACTATTaGTTTCTGGTCAGCTGTTCCCTGTGTGCAGTGAGA +
Preference number: 3 (lower is better)
Translates to: SAPQTCTPSHHY*FLVSCSLCAVR
Trigger: TCTCACTGCACACAGGGAACAGCTGACCAGAAACCAATAGTGATGAGATGGCGTGCAGGTTTGTGGGGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR GCA 72 bp CATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTaGACGCCATCTCATCACTATTGGTTTCTGGTCAGC +
Preference number: 3 (lower is better)
Translates to: HYSLPFLSAPQT*TPSHHYWFLVS
Trigger: GCTGACCAGAAACCAATAGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR CCA 72 bp TTAAGCATTAGTTACTCTACCTCCCACTCTACACAGTaGGAGGGGAAGCGTGGACGGTACAAGGGAAGAGAT +
Preference number: 3 (lower is better)
Translates to: LSISYSTSHSTQ*EGKRGRYKGRD
Trigger: ATCTCTTCCCTTGTACCGTCCACGCTTCCCCTCCCACTGTGTAGAGTGGGAGGTAGAGTAACTAATGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR CCA 72 bp GAACAACTATGGCCAGGAAAACAACAGGACAGAAAGTaGCTAGAGTGGAGGAAGATGCTCAGCGCTCACCTA +
Preference number: 3 (lower is better)
Translates to: EQLWPGKQQDRK*LEWRKMLSAHL
Trigger: TAGGTGAGCGCTGAGCATCTTCCTCCACTCTAGCCACTTTCTGTCCTGTTGTTTTCCTGGCCATAGTTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR TCA 72 bp TGGGACTCTCCAGGCCGCCATGCTGGGGGAATCTTGTaGAGCTGTGTAGTTATTGTAATAGAAAACTCACAG +
Preference number: 3 (lower is better)
Translates to: WDSPGRHAGGIL*SCVVIVIENSQ
Trigger: CTGTGAGTTTTCTATTACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGAGAGTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR TCA 72 bp ACTATTGGTTTCTGGTCAGCTGTTCCCTGTGTGCAGTaGGACATACTTTACCAAGCTATCCTAGCTCGATCC +
Preference number: 3 (lower is better)
Translates to: TIGFWSAVPCVQ*DILYQAILARS
Trigger: GGATCGAGCTAGGATAGCTTGGTAAAGTATGTCTCACTGCACACAGGGAACAGCTGACCAGAAACCAATAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR CCA 72 bp GTGCATTTCCTCCTGTCCAAGCAGGGGTTAAACTCCTaGAATTGTCTGCAACATAACAGCGTAAGATATAAC +
Preference number: 3 (lower is better)
Translates to: VHFLLSKQGLNS*NCLQHNSVRYN
Trigger: GTTATATCTTACGCTGTTATGTTGCAGACAATTCCAGGAGTTTAACCCCTGCTTGGACAGGAGGAAATGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR CCA 72 bp GTTATTGTAATAGAAAACTCACAGTCAACAACCCCATaGGTACAAACACTTGAGATGAAATCTCCTTGTCCA +
Preference number: 3 (lower is better)
Translates to: VIVIENSQSTTP*VQTLEMKSPCP
Trigger: TGGACAAGGAGATTTCATCTCAAGTGTTTGTACCCATGGGGTTGTTGACTGTGAGTTTTCTATTACAATAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp AGAGAGATCCTGCCTAGACCACACACCCTGCACAGTGCTGCCCCGGGGAGGTACGGGCAGCCTGGAGGTTaGCCTGTGGCTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: REILPRPHTLHSAAPGRYGQPGG*PVAPGA
Trigger: AGCTCCTGGAGCCACAGGCCAACCTCCAGGCTGCCC...GTACCTCCCCGGGGCAGCACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp CCTGCGGTCAGTGGGCTGGCAAGCTCTAGTGCTGGGCTCCCATGGGACTCTCCAACTTGCAGGGCAGCCTaGAGGTTGGCCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: PAVSGLASSSAGLPWDSPTCRAA*RLACGS
Trigger: GGAGCCACAGGCCAACCTCCAGGCTGCCCTGCAAGT...TGGAGAGTCCCATGGGAGCCCAGCACTAGAGCTTGCCAGCCCACTGACCGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp GCCGAGGCAGGCACTTCTAGAGAGATCCTGCCTAGACCACACACCCTGCACAGTGTTCGTGCTTCCCCATaGGCCCCAACAGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: AEAGTSREILPRPHTLHSVRASP*APTGEL
Trigger: GAGCTCTCCTGTTGGGGCGCATGGGGAAGCACGAAC...ACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCTAGAAGTGCCTGCCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp AGAGAGATCCTGCCTAGACCACACACCCTGCACAGTGCTGCCCCGGGGAGGTACAAGAGAGCTTGTTCGTaGTTCCCCATGCGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: REILPRPHTLHSAAPGRYKRACS*FPMRPN
Trigger: GTTGGGGCGCATGGGGAAGCACGAACAAGCTCTCTT...GTACCTCCCCGGGGCAGCACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp GGACTCTCCAGGCCGCCATGCTGGGGGAATCTTGTGAAGCTGTGTAGTTATTGTTGGGAGTGCCCTCCATaGGCGGGGAGGTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: GLSRPPCWGNLVKLCSYCWECPP*AGRCWT
Trigger: AGTCCAGCACCTCCCCGCTCATGGAGGGCACTCCCA...ACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGAGAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp TCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTTGGGAGTGCCCTCCATaGGCGGGGAGGTGCTGGACT +
Preference number: 4 (lower is better)
Translates to: SIILRLELPCSLYEGQDPWECPP*AGRCWT
Trigger: AGTCCAGCACCTCCCCGCTCATGGAGGGCACTCCCA...AGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp AGAGAGATCCTGCCTAGACCACACACCCTGCACAGTGCTGCCCCGGGGAGGTACGTGAATGCTTGGAGGTaGCAGGTACATCCGAAGCAG +
Preference number: 4 (lower is better)
Translates to: REILPRPHTLHSAAPGRYVNAWR*QVHPKQ
Trigger: CTGCTTCGGATGTACCTGTCACCTCCAAGCATTCAC...GTACCTCCCCGGGGCAGCACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp TGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCGCTGGAGGTCACAGGTaGACAGTGATGCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: CVPGVCSLQGQKLLCTSCAGGHR*TVMRPW
Trigger: CCAAGGGCGCATCACTGTTCACCTGTGACCTCCAGC...GCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp AGAGAGATCCTGCCTAGACCACACACCCTGCACAGTGCTGCCCCGGGGAGGTACTCACTCTCCTCGATATaGCAGTGGTTGTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: REILPRPHTLHSAAPGRYSLSSI*QWLFSR
Trigger: CCTGGAGAACAACCACTGTCATATCGAGGAGAGTGA...GTACCTCCCCGGGGCAGCACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp AGAGAGATCCTGCCTAGACCACACACCCTGCACAGTGCTGCCCCGGGGAGGTACAGGGAAAATCACAGATaGGCCGGCCTGGATCATAGT +
Preference number: 4 (lower is better)
Translates to: REILPRPHTLHSAAPGRYRENHR*AGLDHS
Trigger: ACTATGATCCAGGCCGGCTCATCTGTGATTTTCCCT...GTACCTCCCCGGGGCAGCACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp AGAGAGATCCTGCCTAGACCACACACCCTGCACAGTGCTGCCCCGGGGAGGTACCTGTTGGATTTGGGTTaGCATGGGGACAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: REILPRPHTLHSAAPGRYLLDLG*HGDRNE
Trigger: CTCATTCCTGTCCCCATGGCAACCCAAATCCAACAG...GTACCTCCCCGGGGCAGCACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp GCCGAGGCAGGCACTTCTAGAGAGATCCTGCCTAGACCACACACCCTGCACAGTGCCCCAGGCAGTGAATaGTTGGAGGTGACAGGTACA +
Preference number: 4 (lower is better)
Translates to: AEAGTSREILPRPHTLHSAPGSE*LEVTGT
Trigger: TGTACCTGTCACCTCCAAGCATTCACTGCCTGGGGC...ACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCTAGAAGTGCCTGCCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGGGGCAGCCTGGAGGTTaGCCTGTGGCTCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: IEKQPPSSLGWSYPVPSMGQPGG*PVAPGA
Trigger: AGCTCCTGGAGCCACAGGCCAACCTCCAGGCTGCCC...CATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp CCTGCGGTCAGTGGGCTGGCAAGCTCTAGTGCTGGGCTCCCATGGGACTCTCCAGAAGATGCCCTTGCTTaGTTCCAACAAGAAGCCATT +
Preference number: 4 (lower is better)
Translates to: PAVSGLASSSAGLPWDSPEDALA*FQQEAI
Trigger: AATGGCTTCTTGTTGGAACCAAGCAAGGGCATCTTC...TGGAGAGTCCCATGGGAGCCCAGCACTAGAGCTTGCCAGCCCACTGACCGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp GTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCTCTCTGGAGGTTGGCCTGTaGCTCCAGGAGCTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: VPGVCSLQGQKLLCTSCSLEVGL*LQELQF
Trigger: AAACTGGAGCTCCTGGAGCCACAGGCCAACCTCCAG...AGAGCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
3UTR CAA 72 bp TGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTaGCTGTGTACCTCTTGCTCTGCGTACCTCTTGCCG +
Preference number: 4 (lower is better)
Translates to: CVPGVCSLQGQK*LCTSCSAYLLP
Trigger: CGGCAAGAGGTACGCAGAGCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp AGAGAGATCCTGCCTAGACCACACACCCTGCACAGTGCTGCCCCGGGGAGGTACCCATGGGGACAGGAATaGGTCTCCAAACAAAATGAT +
Preference number: 4 (lower is better)
Translates to: REILPRPHTLHSAAPGRYPWGQE*VSKQND
Trigger: ATCATTTTGTTTGGAGACTCATTCCTGTCCCCATGG...GTACCTCCCCGGGGCAGCACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp GTCCAGTTAATTCGGAGATGTTCCAGAGAGCAAGGTGGCCAGCATCGTCCCTGGGAGGTGCTGGACTGGTaGTCCGAGTCATTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: VQLIRRCSREQGGQHRPWEVLDW*SESFSF
Trigger: GAAGCTGAATGACTCGGATCACCAGTCCAGCACCTC...CCAGGGACGATGCTGGCCACCTTGCTCTCTGGAACATCTCCGAATTAACTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp ATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGGCAATTGTGGAACTGTaGGCCTGTCTCCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: IILRLELPCSLYEGQDPGAIVEL*ACLLPH
Trigger: GTGTGGGAGGAGACAGGCTCACAGTTCCACAATTGC...CCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp TCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTCCAGGAGCTCCAGTTTaGTTGGCCCCAGGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: SIILRLELPCSLYEGQDPPGAPV*LAPGSE
Trigger: TTCACTGCCTGGGGCCAATCAAACTGGAGCTCCTGG...AGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp AGAGAGATCCTGCCTAGACCACACACCCTGCACAGTGCTGCCCCGGGGAGGTACAGAAGAAGATGCCCTTaGTTGGTTCCAACAAGAAGC +
Preference number: 4 (lower is better)
Translates to: REILPRPHTLHSAAPGRYRRRCP*LVPTRS
Trigger: GCTTCTTGTTGGAACCAAGCAAGGGCATCTTCTTCT...GTACCTCCCCGGGGCAGCACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp ATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGTCACCCGTCTCAGTGTaGTGGAGGTCACAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: IILRLELPCSLYEGQDPGSPVSV*WRSQVN
Trigger: GTTCACCTGTGACCTCCAGCACACTGAGACGGGTGA...CCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGCCCGTCTCAGTGTGCTaGAGGTCACAGGTGAACAGT +
Preference number: 4 (lower is better)
Translates to: IILRLELPCSLYEGQDPGPVSVC*RSQVNS
Trigger: ACTGTTCACCTGTGACCTCCAGCACACTGAGACGGG...CCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp GCCGAGGCAGGCACTTCTAGAGAGATCCTGCCTAGACCACACACCCTGCACAGTTTGGACCAGAAGCCTTaGTTCCAGTGTTCGGATCTC +
Preference number: 4 (lower is better)
Translates to: AEAGTSREILPRPHTLHSLDQKP*FQCSDL
Trigger: GAGATCCGAACACTGGAACCAAGGCTTCTGGTCCAA...ACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCTAGAAGTGCCTGCCTCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp GGACTCTCCAGGCCGCCATGCTGGGGGAATCTTGTGAAGCTGTGTAGTTATTGTCTGGAGGTTGGCCTGTaGCTCCAGGAGCTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: GLSRPPCWGNLVKLCSYCLEVGL*LQELQF
Trigger: AAACTGGAGCTCCTGGAGCCACAGGCCAACCTCCAG...ACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGAGAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp ATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGACTAAGGGCTCCAGCTaGTTTCCTGTTGGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: IILRLELPCSLYEGQDPGTKGSS*FPVGKS
Trigger: GCTCTTCCCAACAGGAAAGCAGCTGGAGCCCTTAGT...CCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGAACTAAGGGCTCCAGCTaGTTTCCTGTTGGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SLGWSYPVPSMKGRILGRTKGSS*FPVGKS
Trigger: GCTCTTCCCAACAGGAAAGCAGCTGGAGCCCTTAGT...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp TGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCGGACTTGGGCACATCTaGCACACTAAAGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: CVPGVCSLQGQKLLCTSCGLGHI*HTKVSL
Trigger: CAGGGAGACTTTAGTGTGCCAGATGTGCCCAAGTCC...GCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp GCCGAGGCAGGCACTTCTAGAGAGATCCTGCCTAGACCACACACCCTGCACAGTCAGCTGCTTTCCTGTTaGGAAGAGCTCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: AEAGTSREILPRPHTLHSQLLSC*EELFDG
Trigger: TCCATCAAAGAGCTCTTCCCAACAGGAAAGCAGCTG...ACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCTAGAAGTGCCTGCCTCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp GTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCTCTGAGCTCCAGTTTGATTaGCCCCAGGCAGTGAATGCT +
Preference number: 4 (lower is better)
Translates to: VPGVCSLQGQKLLCTSCSELQFD*PQAVNA
Trigger: AGCATTCACTGCCTGGGGCCAATCAAACTGGAGCTC...AGAGCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp CCTGCGGTCAGTGGGCTGGCAAGCTCTAGTGCTGGGCTCCCATGGGACTCTCCAACTGTAGTGATTTGTTaGAATGTCAGTAAGTCATGG +
Preference number: 4 (lower is better)
Translates to: PAVSGLASSSAGLPWDSPTVVIC*NVSKSW
Trigger: CCATGACTTACTGACATTTCAACAAATCACTACAGT...TGGAGAGTCCCATGGGAGCCCAGCACTAGAGCTTGCCAGCCCACTGACCGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp GTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCTCTACAGTCAGATCATCCTaGCCCACAGCCACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: VPGVCSLQGQKLLCTSCSTVRSS*PTATFP
Trigger: TGGAAAAGTGGCTGTGGGTCAGGATGATCTGACTGT...AGAGCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp GGACTCTCCAGGCCGCCATGCTGGGGGAATCTTGTGAAGCTGTGTAGTTATTGTACTTCTTCTTGGACTTaGTGGTGGGAGTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: GLSRPPCWGNLVKLCSYCTSSWT*WWECPP
Trigger: TGGAGGGCACTCCCACCATCAAGTCCAAGAAGAAGT...ACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGAGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp CTGCATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATGCAATTGTGGAACTGTaGGCCTGTCTCCTCCCACAC +
Preference number: 4 (lower is better)
Translates to: LHYSLPFLSAPQTCTPSHAIVEL*ACLLPH
Trigger: GTGTGGGAGGAGACAGGCTCACAGTTCCACAATTGC...ATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGATTGCTGGCAGAAGGTTaGTTGCCTTGGTGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: SLGWSYPVPSMKGRILGRLLAEG*LPWWCL
Trigger: TAGACACCACCAAGGCAATCAACCTTCTGCCAGCAA...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp GCCGAGGCAGGCACTTCTAGAGAGATCCTGCCTAGACCACACACCCTGCACAGTAGAATTTTCACACCATaGCATGGACTTGGGCACATC +
Preference number: 4 (lower is better)
Translates to: AEAGTSREILPRPHTLHSRIFTP*HGLGHI
Trigger: GATGTGCCCAAGTCCATGGCATGGTGTGAAAATTCT...ACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCTAGAAGTGCCTGCCTCGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp GTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCTCTTTCATCTCCGCGAGCTaGAGAGCCAATTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: VPGVCSLQGQKLLCTSCSFISAS*RANSNC
Trigger: GCAGTTTGAATTGGCTCTGCAGCTCGCGGAGATGAA...AGAGCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp AGAGAGATCCTGCCTAGACCACACACCCTGCACAGTGCTGCCCCGGGGAGGTACGATGAAGGTTTTCTGTaGCTAAATGCTGCAGATACT +
Preference number: 4 (lower is better)
Translates to: REILPRPHTLHSAAPGRYDEGFL*LNAADT
Trigger: AGTATCTGCAGCATTTAGGCACAGAAAACCTTCATC...GTACCTCCCCGGGGCAGCACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp ATACTCAACAGAGCTGCTCCTGCATTACTCTTTGCCATTCCTCAGTGCCCCACATGCAGCTCTAGGACTTaGAGGGCAGCCTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: ILNRAAPALLFAIPQCPTCSSRT*RAAWRL
Trigger: CAACCTCCAGGCTGCCCTGCAAGTCCTAGAGCTGCA...TGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAGCAGCTCTGTTGAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp GTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCTCTTCTCCCTGCAGTTCGTaGAATTCTCTGTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: VPGVCSLQGQKLLCTSCSSPCSS*NSLSFQ
Trigger: CTGGAAGGACAGAGAATTCCACGAACTGCAGGGAGA...AGAGCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGTTTCACACCATGCCATaGACTTGGGCACATCTGGCA +
Preference number: 4 (lower is better)
Translates to: IILRLELPCSLYEGQDPGFHTMP*TWAHLA
Trigger: TGCCAGATGTGCCCAAGTCCATGGCATGGTGTGAAA...CCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGTACAAGCCCATCACATaGGTGGGATCTGTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: IILRLELPCSLYEGQDPGYKPIT*VGSVPS
Trigger: ACTTGGCACAGATCCCACCCATGTGATGGGCTTGTA...CCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGATGGATCAGGCAATTGTaGAACTGTGAGCCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: SLGWSYPVPSMKGRILGRWIRQL*NCEPVS
Trigger: GGAGACAGGCTCACAGTTCCACAATTGCCTGATCCA...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGAACAGATGAGCCGGCCTaGATCATAGTGGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: SLGWSYPVPSMKGRILGRTDEPA*IIVAGN
Trigger: ATTTCCAGCCACTATGATCCAGGCCGGCTCATCTGT...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp GTCCAGTTAATTCGGAGATGTTCCAGAGAGCAAGGTGGCCAGCATCGTCCCTGGGCACAACCACCCCATTaGGGTATCTTGCAAATGCAC +
Preference number: 4 (lower is better)
Translates to: VQLIRRCSREQGGQHRPWAQPPH*GILQMH
Trigger: GTGCATTTGCAAGATACCCCAATGGGGTGGTTGTGC...CCAGGGACGATGCTGGCCACCTTGCTCTCTGGAACATCTCCGAATTAACTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp TCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTTTGGGAAGAGCTCTTTaGTGGACCCCTTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: SIILRLELPCSLYEGQDPLGRAL*WTPFHP
Trigger: TGGATGGAAAGGGGTCCATCAAAGAGCTCTTCCCAA...AGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp ATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTTTCAGGGCGCATTTCTaGGTGCAGATGCCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: ITLCHSSVPHKPARHLITFRAHF*VQMPSS
Trigger: CGAGGAAGGCATCTGCACTCAGAAATGCGCCCTGAA...AGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp ATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTGAGGTGCTGGACTGGTaGTCCGAGTCATTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: ITLCHSSVPHKPARHLITEVLDW*SESFSF
Trigger: GAAGCTGAATGACTCGGATCACCAGTCCAGCACCTC...AGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp TCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTTCACTCTCCTCGATATaGCAGTGGTTGTTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SIILRLELPCSLYEGQDPSLSSI*QWLFSR
Trigger: CCTGGAGAACAACCACTGTCATATCGAGGAGAGTGA...AGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp GTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCTCTGTGGCCTTTCAAAGGTaGGTTTGCTTTCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: VPGVCSLQGQKLLCTSCSVAFQR*VCFLGL
Trigger: CAGTCCAAGAAAGCAAACTCACCTTTGAAAGGCCAC...AGAGCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp ATACTCAACAGAGCTGCTCCTGCATTACTCTTTGCCATTCCTCAGTGCCCCACAGCCCCAGGCAGTGAATaGTTGGAGGTGACAGGTACA +
Preference number: 4 (lower is better)
Translates to: ILNRAAPALLFAIPQCPTAPGSE*LEVTGT
Trigger: TGTACCTGTCACCTCCAAGCATTCACTGCCTGGGGC...TGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAGCAGCTCTGTTGAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp TCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTTTTCACACCATGCCATaGACTTGGGCACATCTGGCA +
Preference number: 4 (lower is better)
Translates to: SIILRLELPCSLYEGQDPFHTMP*TWAHLA
Trigger: TGCCAGATGTGCCCAAGTCCATGGCATGGTGTGAAA...AGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp GTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCTCTCAGCTGCTTTCCTGTTaGGAAGAGCTCTTTGATGGA +
Preference number: 4 (lower is better)
Translates to: VPGVCSLQGQKLLCTSCSQLLSC*EELFDG
Trigger: TCCATCAAAGAGCTCTTCCCAACAGGAAAGCAGCTG...AGAGCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTGTGCTCCATGGCCACTaGGATGTCTGTCCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: ITLCHSSVPHKPARHLITVLHGH*DVCPVQ
Trigger: CTGAACTGGACAGACATCCCAGTGGCCATGGAGCAC...AGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp GTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCTCTTGCAACTCAATGCTTTaGACCAGAAGCCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: VPGVCSLQGQKLLCTSCSCNSML*TRSLGS
Trigger: GGAACCAAGGCTTCTGGTCCAAAGCATTGAGTTGCA...AGAGCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGAAGCTTCTTTACCAACTaGCTCCGTTTCTGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SLGWSYPVPSMKGRILGRSFFTN*LRFCVR
Trigger: CCTGACACAGAAACGGAGCCAGTTGGTAAAGAAGCT...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGAGTGAGTTTGCTTTCTTaGACTGGTCCACTAGCACCT +
Preference number: 4 (lower is better)
Translates to: SLGWSYPVPSMKGRILGRVSLLS*TGPLAP
Trigger: AGGTGCTAGTGGACCAGTCCAAGAAAGCAAACTCAC...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATGTGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTACAGATGAGCCGGCCTaGATCATAGTGGCTGGAAAT +
Preference number: 4 (lower is better)
Translates to: MCVPGVCSLQGQKLLCTSTDEPA*IIVAGN
Trigger: ATTTCCAGCCACTATGATCCAGGCCGGCTCATCTGT...AGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp TCATCACTATTGGTTTCTGGTCAGCTGTTCCCTGTGTGCAGTGAGACATACTTTACTTGCAGGGCAGCCTaGAGGTTGGCCTGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSLLVSGQLFPVCSETYFTCRAA*RLACGS
Trigger: GGAGCCACAGGCCAACCTCCAGGCTGCCCTGCAAGT...AAAGTATGTCTCACTGCACACAGGGAACAGCTGACCAGAAACCAATAGTGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp GCCGAGGCAGGCACTTCTAGAGAGATCCTGCCTAGACCACACACCCTGCACAGTCTGAGTTTACCTCTTTaGAGCAGAAGTAGTGCACAA +
Preference number: 4 (lower is better)
Translates to: AEAGTSREILPRPHTLHSLSLPL*SRSSAQ
Trigger: TTGTGCACTACTTCTGCTCCAAAGAGGTAAACTCAG...ACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCTAGAAGTGCCTGCCTCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp ATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGTGCGCCCTTGGCCTTTaGGACTGTAGTGATTTGTTG +
Preference number: 4 (lower is better)
Translates to: IEKQPPSSLGWSYPVPSMCALGL*DCSDLL
Trigger: CAACAAATCACTACAGTCTCAAAGGCCAAGGGCGCA...CATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp CTGCATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATACAGTCAGATCATCCTaGCCCACAGCCACTTTTCCA +
Preference number: 4 (lower is better)
Translates to: LHYSLPFLSAPQTCTPSHTVRSS*PTATFP
Trigger: TGGAAAAGTGGCTGTGGGTCAGGATGATCTGACTGT...ATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp TCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTCTGCTTTTCACTGTCTaGGTCATCTTTCATCTCCGC +
Preference number: 4 (lower is better)
Translates to: SIILRLELPCSLYEGQDPLLFTV*VIFHLR
Trigger: GCGGAGATGAAAGATGACTCAGACAGTGAAAAGCAG...AGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp GTCCAGTTAATTCGGAGATGTTCCAGAGAGCAAGGTGGCCAGCATCGTCCCTGGTCTTCTCATACAGGATaGTCAGCTCGCTGTACTTGT +
Preference number: 4 (lower is better)
Translates to: VQLIRRCSREQGGQHRPWSSHTG*SARCTC
Trigger: ACAAGTACAGCGAGCTGATCATCCTGTATGAGAAGA...CCAGGGACGATGCTGGCCACCTTGCTCTCTGGAACATCTCCGAATTAACTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp ATGTGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTGTGGCCTTTCAAAGGTaGGTTTGCTTTCTTGGACTG +
Preference number: 4 (lower is better)
Translates to: MCVPGVCSLQGQKLLCTSVAFQR*VCFLGL
Trigger: CAGTCCAAGAAAGCAAACTCACCTTTGAAAGGCCAC...AGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp TGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCAGAAGAAGATGCCCTTaGTTGGTTCCAACAAGAAGC +
Preference number: 4 (lower is better)
Translates to: CVPGVCSLQGQKLLCTSCRRRCP*LVPTRS
Trigger: GCTTCTTGTTGGAACCAAGCAAGGGCATCTTCTTCT...GCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp ATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGTTCCAGAAGTACAGCTaGAGCTTCTTCCTCACTGCC +
Preference number: 4 (lower is better)
Translates to: IEKQPPSSLGWSYPVPSMFQKYS*SFFLTA
Trigger: GGCAGTGAGGAAGAAGCTGCAGCTGTACTTCTGGAA...CATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp TCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTATTGGCTGTTGGATTTGGGTTaGCATGGGGACAGGAATGAG +
Preference number: 4 (lower is better)
Translates to: SLPFLSAPQTCTPSHHYWLLDLG*HGDRNE
Trigger: CTCATTCCTGTCCCCATGGCAACCCAAATCCAACAG...CCAATAGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp ATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTAAATGCTGCAGATACTaGACCGTCCTCTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: ITLCHSSVPHKPARHLITKCCRY*TVLSWP
Trigger: AGGCCACGAGAGGACGGTGCAGTATCTGCAGCATTT...AGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp TGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCGATCTCCACGTATCGTaGCAACACTGCAACAATGTA +
Preference number: 4 (lower is better)
Translates to: CVPGVCSLQGQKLLCTSCDLHVS*QHCNNV
Trigger: TACATTGTTGCAGTGTTGCCACGATACGTGGAGATC...GCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAGAAGCTGTTGGATTTaGGTTGCCATGGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: IEKQPPSSLGWSYPVPSMRSCWI*VAMGTG
Trigger: TCCTGTCCCCATGGCAACCCAAATCCAACAGCTTCT...CATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp CTGCATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATAGAAGCTGTTGGATTTaGGTTGCCATGGGGACAGGA +
Preference number: 4 (lower is better)
Translates to: LHYSLPFLSAPQTCTPSHRSCWI*VAMGTG
Trigger: TCCTGTCCCCATGGCAACCCAAATCCAACAGCTTCT...ATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp GTCCAGTTAATTCGGAGATGTTCCAGAGAGCAAGGTGGCCAGCATCGTCCCTGGTCAAACTGCTTGTCCTaGAGAAGCTGTTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: VQLIRRCSREQGGQHRPWSNCLS*RSCWIW
Trigger: CCAAATCCAACAGCTTCTCCAGGACAAGCAGTTTGA...CCAGGGACGATGCTGGCCACCTTGCTCTCTGGAACATCTCCGAATTAACTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATGTGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTAGCTTCTTTACCAACTaGCTCCGTTTCTGTGTCAGG +
Preference number: 4 (lower is better)
Translates to: MCVPGVCSLQGQKLLCTSSFFTN*LRFCVR
Trigger: CCTGACACAGAAACGGAGCCAGTTGGTAAAGAAGCT...AGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATACTCAACAGAGCTGCTCCTGCATTACTCTTTGCCATTCCTCAGTGCCCCACACTTCAGGCCATCTTCTaGGAAGTCTCTCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: ILNRAAPALLFAIPQCPTLQAIF*EVSQHP
Trigger: TGGGTGCTGAGAGACTTCCCAGAAGATGGCCTGAAG...TGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAGCAGCTCTGTTGAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp GTCCAGTTAATTCGGAGATGTTCCAGAGAGCAAGGTGGCCAGCATCGTCCCTGGTTCTCACAGTACAGCTaGATCAGGCAATTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: VQLIRRCSREQGGQHRPWFSQYS*IRQLWN
Trigger: GTTCCACAATTGCCTGATCCAGCTGTACTGTGAGAA...CCAGGGACGATGCTGGCCACCTTGCTCTCTGGAACATCTCCGAATTAACTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp GTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCTCTGATCTGAGTGTTTGCTaGCAGAAGGTTGATTGCCTT +
Preference number: 4 (lower is better)
Translates to: VPGVCSLQGQKLLCTSCSDLSVC*QKVDCL
Trigger: AAGGCAATCAACCTTCTGCCAGCAAACACTCAGATC...AGAGCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp CTGCATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCTGCTTTTCACTGTCTaGGTCATCTTTCATCTCCGC +
Preference number: 4 (lower is better)
Translates to: LHYSLPFLSAPQTCTPSHLLFTV*VIFHLR
Trigger: GCGGAGATGAAAGATGACTCAGACAGTGAAAAGCAG...ATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp ATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGGTGGTGTCAATGATCTaGAGTAACTTCTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: IILRLELPCSLYEGQDPGVVSMI*SNFFLD
Trigger: GTCCAAGAAGAAGTTACTTCAGATCATTGACACCAC...CCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp CTTCTAGTAAAAAGCCGGCAATGCCAGGTCACAAGTCCAGTTAATTCGGAGATGTCACCCGTCTCAGTGTaGTGGAGGTCACAGGTGAAC +
Preference number: 4 (lower is better)
Translates to: LLVKSRQCQVTSPVNSEMSPVSV*WRSQVN
Trigger: GTTCACCTGTGACCTCCAGCACACTGAGACGGGTGA...CATCTCCGAATTAACTGGACTTGTGACCTGGCATTGCCGGCTTTTTACTAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp TCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTATTGGATGAAGCGAGGCCTTTaGAACTCAATGCTTTGGACC +
Preference number: 4 (lower is better)
Translates to: SLPFLSAPQTCTPSHHYWMKRGL*NSMLWT
Trigger: GGTCCAAAGCATTGAGTTGCAAAGGCCTCGCTTCAT...CCAATAGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp ATACTCAACAGAGCTGCTCCTGCATTACTCTTTGCCATTCCTCAGTGCCCCACATTCATCTCCGCGAGCTaGAGAGCCAATTCAAACTGC +
Preference number: 4 (lower is better)
Translates to: ILNRAAPALLFAIPQCPTFISAS*RANSNC
Trigger: GCAGTTTGAATTGGCTCTGCAGCTCGCGGAGATGAA...TGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAGCAGCTCTGTTGAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp CTTCTAGTAAAAAGCCGGCAATGCCAGGTCACAAGTCCAGTTAATTCGGAGATGAAGAGAGCTTGTTCGTaGTTCCCCATGCGCCCCAAC +
Preference number: 4 (lower is better)
Translates to: LLVKSRQCQVTSPVNSEMKRACS*FPMRPN
Trigger: GTTGGGGCGCATGGGGAAGCACGAACAAGCTCTCTT...CATCTCCGAATTAACTGGACTTGTGACCTGGCATTGCCGGCTTTTTACTAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAACTGGGAAACCACATaGATCTGCTGGATCTTTTTG +
Preference number: 4 (lower is better)
Translates to: IILRLELPCSLYEGQDPGNWETT*ICWIFL
Trigger: CAAAAAGATCCAGCAGATCCATGTGGTTTCCCAGTT...CCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp TCCAGGCCGCCATGCTGGGGGAATCTTGTGAAGCTGTGTAGTTATTGTAATAGACACTGCAACAATGTATaGAGGCTGGTGCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: SRPPCWGNLVKLCSYCNRHCNNV*RLVLHG
Trigger: GCCATGGAGCACCAGCCTCCATACATTGTTGCAGTG...TCTATTACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATACTCAACAGAGCTGCTCCTGCATTACTCTTTGCCATTCCTCAGTGCCCCACATACAAGCCCATCACATaGGTGGGATCTGTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: ILNRAAPALLFAIPQCPTYKPIT*VGSVPS
Trigger: ACTTGGCACAGATCCCACCCATGTGATGGGCTTGTA...TGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAGCAGCTCTGTTGAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp TCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTATTGGTGCAGAGCTTTCTCATaGAGCCCCTTCTTCTCATAC +
Preference number: 4 (lower is better)
Translates to: SLPFLSAPQTCTPSHHYWCRAFS*SPFFSY
Trigger: GTATGAGAAGAAGGGGCTCCATGAGAAAGCTCTGCA...CCAATAGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTGCACAACCACCCCATTaGGGTATCTTGCAAATGCAC +
Preference number: 4 (lower is better)
Translates to: ITLCHSSVPHKPARHLITAQPPH*GILQMH
Trigger: GTGCATTTGCAAGATACCCCAATGGGGTGGTTGTGC...AGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp TCCAGGCCGCCATGCTGGGGGAATCTTGTGAAGCTGTGTAGTTATTGTAATAGATGCGCCCTTGGCCTTTaGGACTGTAGTGATTTGTTG +
Preference number: 4 (lower is better)
Translates to: SRPPCWGNLVKLCSYCNRCALGL*DCSDLL
Trigger: CAACAAATCACTACAGTCTCAAAGGCCAAGGGCGCA...TCTATTACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp TGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCTACAAGTTCTTAATGTaGTGGATCTGCTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: CVPGVCSLQGQKLLCTSCYKFLM*WICCCF
Trigger: AAAGCAGCAGCAGATCCATCACATTAAGAACTTGTA...GCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp ATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGTACAAGTTCTTAATGTaGTGGATCTGCTGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: IILRLELPCSLYEGQDPGYKFLM*WICCCF
Trigger: AAAGCAGCAGCAGATCCATCACATTAAGAACTTGTA...CCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp ATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTGTGTCAGGTAGTCAATaGGAGCTAAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: ITLCHSSVPHKPARHLITVSGSQ*ELSEPS
Trigger: AGAAGGCTCACTTAGCTCTCATTGACTACCTGACAC...AGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGAGAATGGCTAGAGCCTTaGAATTCTCTATCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: SLGWSYPVPSMKGRILGREWLEP*NSLSRS
Trigger: ACTTCTTGATAGAGAATTTCAAGGCTCTAGCCATTC...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp TGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCGAATGGCTAGAGCCTTaGAATTCTCTATCAAGAAGT +
Preference number: 4 (lower is better)
Translates to: CVPGVCSLQGQKLLCTSCEWLEP*NSLSRS
Trigger: ACTTCTTGATAGAGAATTTCAAGGCTCTAGCCATTC...GCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp TCCAGGCCGCCATGCTGGGGGAATCTTGTGAAGCTGTGTAGTTATTGTAATAGATTGCTGGCAGAAGGTTaGTTGCCTTGGTGGTGTCTA +
Preference number: 4 (lower is better)
Translates to: SRPPCWGNLVKLCSYCNRLLAEG*LPWWCL
Trigger: TAGACACCACCAAGGCAATCAACCTTCTGCCAGCAA...TCTATTACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp CTGCATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATAGAGCCAATTCAAACTaGTTGTCCTGGAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: LHYSLPFLSAPQTCTPSHRANSN*LSWRSC
Trigger: ACAGCTTCTCCAGGACAAGCAGTTTGAATTGGCTCT...ATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp ACACTTGAGATGAAATCTCCTTGTCCAGATGATTGGTATACAAAGGCAAGATGGGTTCGTGCTTCCCCATaGGCCCCAACAGGAGAGCTC +
Preference number: 4 (lower is better)
Translates to: TLEMKSPCPDDWYTKARWVRASP*APTGEL
Trigger: GAGCTCTCCTGTTGGGGCGCATGGGGAAGCACGAAC...CCATCTTGCCTTTGTATACCAATCATCTGGACAAGGAGATTTCATCTCAAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp GGACTCTCCAGGCCGCCATGCTGGGGGAATCTTGTGAAGCTGTGTAGTTATTGTATTGATCTGAGTGTTTaGTGGCAGAAGGTTGATTGC +
Preference number: 4 (lower is better)
Translates to: GLSRPPCWGNLVKLCSYCIDLSV*WQKVDC
Trigger: GCAATCAACCTTCTGCCAGCAAACACTCAGATCAAT...ACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGAGAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp GGACTCTCCAGGCCGCCATGCTGGGGGAATCTTGTGAAGCTGTGTAGTTATTGTACCAGAATCTTAAACTaGGAAACCACATGGATCTGC +
Preference number: 4 (lower is better)
Translates to: GLSRPPCWGNLVKLCSYCTRILN*ETTWIC
Trigger: GCAGATCCATGTGGTTTCCCAGTTTAAGATTCTGGT...ACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGAGAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGTCAAACTGCTTGTCCTaGAGAAGCTGTTGGATTTGG +
Preference number: 4 (lower is better)
Translates to: IEKQPPSSLGWSYPVPSMSNCLS*RSCWIW
Trigger: CCAAATCCAACAGCTTCTCCAGGACAAGCAGTTTGA...CATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTTGCAGAGCTTTCTCATaGAGCCCCTTCTTCTCATAC +
Preference number: 4 (lower is better)
Translates to: ITLCHSSVPHKPARHLITCRAFS*SPFFSY
Trigger: GTATGAGAAGAAGGGGCTCCATGAGAAAGCTCTGCA...AGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATACTCAACAGAGCTGCTCCTGCATTACTCTTTGCCATTCCTCAGTGCCCCACATTTGCTTTCTTGGACTaGTCCACTAGCACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: ILNRAAPALLFAIPQCPTFAFLD*STSTCR
Trigger: TCTGCAGGTGCTAGTGGACCAGTCCAAGAAAGCAAA...TGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAGCAGCTCTGTTGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp CTTCTAGTAAAAAGCCGGCAATGCCAGGTCACAAGTCCAGTTAATTCGGAGATGTTGGGAAGAGCTCTTTaGTGGACCCCTTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: LLVKSRQCQVTSPVNSEMLGRAL*WTPFHP
Trigger: TGGATGGAAAGGGGTCCATCAAAGAGCTCTTCCCAA...CATCTCCGAATTAACTGGACTTGTGACCTGGCATTGCCGGCTTTTTACTAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp AGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACTTCAGGGCGCATTTCTaGGTGCAGATGCCTTCCTCG +
Preference number: 4 (lower is better)
Translates to: SMHTTQEKIQALFYCFKHFRAHF*VQMPSS
Trigger: CGAGGAAGGCATCTGCACTCAGAAATGCGCCCTGAA...GTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp TCATCACTATTGGTTTCTGGTCAGCTGTTCCCTGTGTGCAGTGAGACATACTTTACTTCTTCTTGGACTTaGTGGTGGGAGTGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: SSLLVSGQLFPVCSETYFTSSWT*WWECPP
Trigger: TGGAGGGCACTCCCACCATCAAGTCCAAGAAGAAGT...AAAGTATGTCTCACTGCACACAGGGAACAGCTGACCAGAAACCAATAGTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp AGGGAAACAGAATTAAGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCCCAGGAGCTCCAGTTTaGTTGGCCCCAGGCAGTGAA +
Preference number: 4 (lower is better)
Translates to: RETELSMHTTQEKIQALFPGAPV*LAPGSE
Trigger: TTCACTGCCTGGGGCCAATCAAACTGGAGCTCCTGG...GAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACTTAATTCTGTTTCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp ACACTTGAGATGAAATCTCCTTGTCCAGATGATTGGTATACAAAGGCAAGATGGACTGCCGCTTTCAGGTaGGGCTACATCTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TLEMKSPCPDDWYTKARWTAAFR*GYICWH
Trigger: GTGCCAGCAGATGTAGCCTCACCTGAAAGCGGCAGT...CCATCTTGCCTTTGTATACCAATCATCTGGACAAGGAGATTTCATCTCAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp ATACTCAACAGAGCTGCTCCTGCATTACTCTTTGCCATTCCTCAGTGCCCCACAAGAGCCAATTCAAACTaGTTGTCCTGGAGAAGCTGT +
Preference number: 4 (lower is better)
Translates to: ILNRAAPALLFAIPQCPTRANSN*LSWRSC
Trigger: ACAGCTTCTCCAGGACAAGCAGTTTGAATTGGCTCT...TGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAGCAGCTCTGTTGAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp ACACTTGAGATGAAATCTCCTTGTCCAGATGATTGGTATACAAAGGCAAGATGGTGCAGCTCTAGGACTTaGAGGGCAGCCTGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: TLEMKSPCPDDWYTKARWCSSRT*RAAWRL
Trigger: CAACCTCCAGGCTGCCCTGCAAGTCCTAGAGCTGCA...CCATCTTGCCTTTGTATACCAATCATCTGGACAAGGAGATTTCATCTCAAGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAACTGGGAAACCACATaGATCTGCTGGATCTTTTTG +
Preference number: 4 (lower is better)
Translates to: IEKQPPSSLGWSYPVPSMNWETT*ICWIFL
Trigger: CAAAAAGATCCAGCAGATCCATGTGGTTTCCCAGTT...CATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp TCATCACTATTGGTTTCTGGTCAGCTGTTCCCTGTGTGCAGTGAGACATACTTTCTTCAGGCCATCTTCTaGGAAGTCTCTCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: SSLLVSGQLFPVCSETYFLQAIF*EVSQHP
Trigger: TGGGTGCTGAGAGACTTCCCAGAAGATGGCCTGAAG...AAAGTATGTCTCACTGCACACAGGGAACAGCTGACCAGAAACCAATAGTGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp TCATCACTATTGGTTTCTGGTCAGCTGTTCCCTGTGTGCAGTGAGACATACTTTGAGCTCCAGTTTGATTaGCCCCAGGCAGTGAATGCT +
Preference number: 4 (lower is better)
Translates to: SSLLVSGQLFPVCSETYFELQFD*PQAVNA
Trigger: AGCATTCACTGCCTGGGGCCAATCAAACTGGAGCTC...AAAGTATGTCTCACTGCACACAGGGAACAGCTGACCAGAAACCAATAGTGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp CTTCTAGTAAAAAGCCGGCAATGCCAGGTCACAAGTCCAGTTAATTCGGAGATGGTGTCAGGTAGTCAATaGGAGCTAAGTGAGCCTTCT +
Preference number: 4 (lower is better)
Translates to: LLVKSRQCQVTSPVNSEMVSGSQ*ELSEPS
Trigger: AGAAGGCTCACTTAGCTCTCATTGACTACCTGACAC...CATCTCCGAATTAACTGGACTTGTGACCTGGCATTGCCGGCTTTTTACTAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp ATACTCAACAGAGCTGCTCCTGCATTACTCTTTGCCATTCCTCAGTGCCCCACAGTGGTGTCAATGATCTaGAGTAACTTCTTCTTGGAC +
Preference number: 4 (lower is better)
Translates to: ILNRAAPALLFAIPQCPTVVSMI*SNFFLD
Trigger: GTCCAAGAAGAAGTTACTTCAGATCATTGACACCAC...TGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAGCAGCTCTGTTGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp TCCAGGCCGCCATGCTGGGGGAATCTTGTGAAGCTGTGTAGTTATTGTAATAGAAGTTTAGCAAAGACCTaGATGGACTCATCAAAGCGC +
Preference number: 4 (lower is better)
Translates to: SRPPCWGNLVKLCSYCNRSLAKT*MDSSKR
Trigger: GCGCTTTGATGAGTCCATGCAGGTCTTTGCTAAACT...TCTATTACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp ATACTCAACAGAGCTGCTCCTGCATTACTCTTTGCCATTCCTCAGTGCCCCACATCTTTCATCAGACTCTaGACTTTCTCACAGTACAGC +
Preference number: 4 (lower is better)
Translates to: ILNRAAPALLFAIPQCPTSFIRL*TFSQYS
Trigger: GCTGTACTGTGAGAAAGTGCAGAGTCTGATGAAAGA...TGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAGCAGCTCTGTTGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp TCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTATTGGACCACATGGATCTGCTaGATCTTTTTGGAAAAGTTC +
Preference number: 4 (lower is better)
Translates to: SLPFLSAPQTCTPSHHYWTTWIC*IFLEKF
Trigger: GAACTTTTCCAAAAAGATCCAGCAGATCCATGTGGT...CCAATAGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ACACTTGAGATGAAATCTCCTTGTCCAGATGATTGGTATACAAAGGCAAGATGGCCCGTCTCAGTGTGCTaGAGGTCACAGGTGAACAGT +
Preference number: 4 (lower is better)
Translates to: TLEMKSPCPDDWYTKARWPVSVC*RSQVNS
Trigger: ACTGTTCACCTGTGACCTCCAGCACACTGAGACGGG...CCATCTTGCCTTTGTATACCAATCATCTGGACAAGGAGATTTCATCTCAAGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp CACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACAGTTCAGGACTTGGGCACATCTaGCACACTAAAGTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HTTQEKIQALFYCFKHSSGLGHI*HTKVSL
Trigger: CAGGGAGACTTTAGTGTGCCAGATGTGCCCAAGTCC...TGAACTGTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp AGGGAAACAGAATTAAGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCGTGCTCCATGGCCACTaGGATGTCTGTCCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: RETELSMHTTQEKIQALFVLHGH*DVCPVQ
Trigger: CTGAACTGGACAGACATCCCAGTGGCCATGGAGCAC...GAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACTTAATTCTGTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp AGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACCACTGCAACAATGTATaGAGGCTGGTGCTCCATGGC +
Preference number: 4 (lower is better)
Translates to: SMHTTQEKIQALFYCFKHHCNNV*RLVLHG
Trigger: GCCATGGAGCACCAGCCTCCATACATTGTTGCAGTG...GTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp TCCAGGCCGCCATGCTGGGGGAATCTTGTGAAGCTGTGTAGTTATTGTAATAGAGATCTCCACGTATCGTaGCAACACTGCAACAATGTA +
Preference number: 4 (lower is better)
Translates to: SRPPCWGNLVKLCSYCNRDLHVS*QHCNNV
Trigger: TACATTGTTGCAGTGTTGCCACGATACGTGGAGATC...TCTATTACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp CTTATGTTTATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTTGCAACTCAATGCTTTaGACCAGAAGCCTTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LMFIEKQPPSSLGWSYPVCNSML*TRSLGS
Trigger: GGAACCAAGGCTTCTGGTCCAAAGCATTGAGTTGCA...AACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAATAAACATAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp CTTCTAGTAAAAAGCCGGCAATGCCAGGTCACAAGTCCAGTTAATTCGGAGATGTCATCAAAGCGCTTCTaGCAGAAGAGGTTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LLVKSRQCQVTSPVNSEMSSKRF*QKRLKA
Trigger: TGCCTTCAACCTCTTCTGCCAGAAGCGCTTTGATGA...CATCTCCGAATTAACTGGACTTGTGACCTGGCATTGCCGGCTTTTTACTAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp TCCAGGCCGCCATGCTGGGGGAATCTTGTGAAGCTGTGTAGTTATTGTAATAGATTCTCACAGTACAGCTaGATCAGGCAATTGTGGAAC +
Preference number: 4 (lower is better)
Translates to: SRPPCWGNLVKLCSYCNRFSQYS*IRQLWN
Trigger: GTTCCACAATTGCCTGATCCAGCTGTACTGTGAGAA...TCTATTACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp CTTCTAGTAAAAAGCCGGCAATGCCAGGTCACAAGTCCAGTTAATTCGGAGATGTCTTCTCATACAGGATaGTCAGCTCGCTGTACTTGT +
Preference number: 4 (lower is better)
Translates to: LLVKSRQCQVTSPVNSEMSSHTG*SARCTC
Trigger: ACAAGTACAGCGAGCTGATCATCCTGTATGAGAAGA...CATCTCCGAATTAACTGGACTTGTGACCTGGCATTGCCGGCTTTTTACTAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp AGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACAGGGAAAATCACAGATaGGCCGGCCTGGATCATAGT +
Preference number: 4 (lower is better)
Translates to: SMHTTQEKIQALFYCFKHRENHR*AGLDHS
Trigger: ACTATGATCCAGGCCGGCTCATCTGTGATTTTCCCT...GTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp AGGGAAACAGAATTAAGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCGTGAATGCTTGGAGGTaGCAGGTACATCCGAAGCAG +
Preference number: 4 (lower is better)
Translates to: RETELSMHTTQEKIQALFVNAWR*QVHPKQ
Trigger: CTGCTTCGGATGTACCTGTCACCTCCAAGCATTCAC...GAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACTTAATTCTGTTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp CTTATGTTTATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTAGATGCGTATGTCATTaGTCTGAGTGTTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LMFIEKQPPSSLGWSYPVRCVCH*SECLLA
Trigger: TGCCAGCAAACACTCAGATCAATGACATACGCATCT...AACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAATAAACATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp CTTATGTTTATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTAGAATTTTCACACCATaGCATGGACTTGGGCACATC +
Preference number: 4 (lower is better)
Translates to: LMFIEKQPPSSLGWSYPVRIFTP*HGLGHI
Trigger: GATGTGCCCAAGTCCATGGCATGGTGTGAAAATTCT...AACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAATAAACATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp TCATCACTATTGGTTTCTGGTCAGCTGTTCCCTGTGTGCAGTGAGACATACTTTGCCTTTGCAACTCAATaGTTTGGACCAGAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: SSLLVSGQLFPVCSETYFAFATQ*FGPEAL
Trigger: CAAGGCTTCTGGTCCAAAGCATTGAGTTGCAAAGGC...AAAGTATGTCTCACTGCACACAGGGAACAGCTGACCAGAAACCAATAGTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp AGGGAAACAGAATTAAGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCAAATGCTGCAGATACTaGACCGTCCTCTCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: RETELSMHTTQEKIQALFKCCRY*TVLSWP
Trigger: AGGCCACGAGAGGACGGTGCAGTATCTGCAGCATTT...GAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACTTAATTCTGTTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp TCCAGGCCGCCATGCTGGGGGAATCTTGTGAAGCTGTGTAGTTATTGTAATAGATCTTTCATCAGACTCTaGACTTTCTCACAGTACAGC +
Preference number: 4 (lower is better)
Translates to: SRPPCWGNLVKLCSYCNRSFIRL*TFSQYS
Trigger: GCTGTACTGTGAGAAAGTGCAGAGTCTGATGAAAGA...TCTATTACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp CTTATGTTTATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCATTGGGGTATCTTaGAAATGCACTGTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: LMFIEKQPPSSLGWSYPVPIGVS*KCTVPN
Trigger: ATTGGGAACAGTGCATTTGCAAGATACCCCAATGGG...AACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAATAAACATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATACTCAACAGAGCTGCTCCTGCATTACTCTTTGCCATTCCTCAGTGCCCCACAACCACATGGATCTGCTaGATCTTTTTGGAAAAGTTC +
Preference number: 4 (lower is better)
Translates to: ILNRAAPALLFAIPQCPTTTWIC*IFLEKF
Trigger: GAACTTTTCCAAAAAGATCCAGCAGATCCATGTGGT...TGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAGCAGCTCTGTTGAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp CACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACAGTTCATCTCCCTGCAGTTCGTaGAATTCTCTGTCCTTCCAG +
Preference number: 4 (lower is better)
Translates to: HTTQEKIQALFYCFKHSSSPCSS*NSLSFQ
Trigger: CTGGAAGGACAGAGAATTCCACGAACTGCAGGGAGA...TGAACTGTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp TCCAGGCCGCCATGCTGGGGGAATCTTGTGAAGCTGTGTAGTTATTGTAATAGAGATGAAGGTTTTCTGTaGCTAAATGCTGCAGATACT +
Preference number: 4 (lower is better)
Translates to: SRPPCWGNLVKLCSYCNRDEGFL*LNAADT
Trigger: AGTATCTGCAGCATTTAGGCACAGAAAACCTTCATC...TCTATTACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp CTTCTAGTAAAAAGCCGGCAATGCCAGGTCACAAGTCCAGTTAATTCGGAGATGATTGATCTGAGTGTTTaGTGGCAGAAGGTTGATTGC +
Preference number: 4 (lower is better)
Translates to: LLVKSRQCQVTSPVNSEMIDLSV*WQKVDC
Trigger: GCAATCAACCTTCTGCCAGCAAACACTCAGATCAAT...CATCTCCGAATTAACTGGACTTGTGACCTGGCATTGCCGGCTTTTTACTAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp CTTATGTTTATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTATGATGCACTTCACCTaGTGGTGTAAAATTCGCTCT +
Preference number: 4 (lower is better)
Translates to: LMFIEKQPPSSLGWSYPVMMHFT*WCKIRS
Trigger: AGAGCGAATTTTACACCAGCAGGTGAAGTGCATCAT...AACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAATAAACATAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp CTGCATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATTGGAAAAGTTCTTATTaGACTTCTCTAGTGTTACCT +
Preference number: 4 (lower is better)
Translates to: LHYSLPFLSAPQTCTPSHWKSSY*TSLVLP
Trigger: AGGTAACACTAGAGAAGTCCAATAAGAACTTTTCCA...ATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp CTTATGTTTATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTACCAGAATCTTAAACTaGGAAACCACATGGATCTGC +
Preference number: 4 (lower is better)
Translates to: LMFIEKQPPSSLGWSYPVTRILN*ETTWIC
Trigger: GCAGATCCATGTGGTTTCCCAGTTTAAGATTCTGGT...AACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAATAAACATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp AGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACTTTGCTTTCTTGGACTaGTCCACTAGCACCTGCAGA +
Preference number: 4 (lower is better)
Translates to: SMHTTQEKIQALFYCFKHFAFLD*STSTCR
Trigger: TCTGCAGGTGCTAGTGGACCAGTCCAAGAAAGCAAA...GTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp CACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACAGTTCAGTGAGTTTGCTTTCTTaGACTGGTCCACTAGCACCT +
Preference number: 4 (lower is better)
Translates to: HTTQEKIQALFYCFKHSSVSLLS*TGPLAP
Trigger: AGGTGCTAGTGGACCAGTCCAAGAAAGCAAACTCAC...TGAACTGTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp CTTATGTTTATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTCTGAGTTTACCTCTTTaGAGCAGAAGTAGTGCACAA +
Preference number: 4 (lower is better)
Translates to: LMFIEKQPPSSLGWSYPVLSLPL*SRSSAQ
Trigger: TTGTGCACTACTTCTGCTCCAAAGAGGTAAACTCAG...AACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAATAAACATAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp CACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACAGTTCACCATGGGGACAGGAATaGGTCTCCAAACAAAATGAT +
Preference number: 4 (lower is better)
Translates to: HTTQEKIQALFYCFKHSSPWGQE*VSKQND
Trigger: ATCATTTTGTTTGGAGACTCATTCCTGTCCCCATGG...TGAACTGTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp CACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACAGTTCAAGATGCGTATGTCATTaGTCTGAGTGTTTGCTGGCA +
Preference number: 4 (lower is better)
Translates to: HTTQEKIQALFYCFKHSSRCVCH*SECLLA
Trigger: TGCCAGCAAACACTCAGATCAATGACATACGCATCT...TGAACTGTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp AGGGAAACAGAATTAAGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCGCCTTTGCAACTCAATaGTTTGGACCAGAAGCCTTG +
Preference number: 4 (lower is better)
Translates to: RETELSMHTTQEKIQALFAFATQ*FGPEAL
Trigger: CAAGGCTTCTGGTCCAAAGCATTGAGTTGCAAAGGC...GAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACTTAATTCTGTTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp TCATCACTATTGGTTTCTGGTCAGCTGTTCCCTGTGTGCAGTGAGACATACTTTATGATGCACTTCACCTaGTGGTGTAAAATTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SSLLVSGQLFPVCSETYFMMHFT*WCKIRS
Trigger: AGAGCGAATTTTACACCAGCAGGTGAAGTGCATCAT...AAAGTATGTCTCACTGCACACAGGGAACAGCTGACCAGAAACCAATAGTGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp ATACTCAACAGAGCTGCTCCTGCATTACTCTTTGCCATTCCTCAGTGCCCCACATGGAAAAGTTCTTATTaGACTTCTCTAGTGTTACCT +
Preference number: 4 (lower is better)
Translates to: ILNRAAPALLFAIPQCPTWKSSY*TSLVLP
Trigger: AGGTAACACTAGAGAAGTCCAATAAGAACTTTTCCA...TGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAGCAGCTCTGTTGAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CCA 90 bp CACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACAGTTCAGATCTGAGTGTTTGCTaGCAGAAGGTTGATTGCCTT +
Preference number: 4 (lower is better)
Translates to: HTTQEKIQALFYCFKHSSDLSVC*QKVDCL
Trigger: AAGGCAATCAACCTTCTGCCAGCAAACACTCAGATC...TGAACTGTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp AGGGAAACAGAATTAAGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCAGTTTAGCAAAGACCTaGATGGACTCATCAAAGCGC +
Preference number: 4 (lower is better)
Translates to: RETELSMHTTQEKIQALFSLAKT*MDSSKR
Trigger: GCGCTTTGATGAGTCCATGCAGGTCTTTGCTAAACT...GAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACTTAATTCTGTTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR GCA 90 bp AGGGAAACAGAATTAAGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCCCCATTGGGGTATCTTaGAAATGCACTGTTCCCAAT +
Preference number: 4 (lower is better)
Translates to: RETELSMHTTQEKIQALFPIGVS*KCTVPN
Trigger: ATTGGGAACAGTGCATTTGCAAGATACCCCAATGGG...GAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACTTAATTCTGTTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR TCA 90 bp ACACTTGAGATGAAATCTCCTTGTCCAGATGATTGGTATACAAAGGCAAGATGGACTGTAGTGATTTGTTaGAATGTCAGTAAGTCATGG +
Preference number: 4 (lower is better)
Translates to: TLEMKSPCPDDWYTKARWTVVIC*NVSKSW
Trigger: CCATGACTTACTGACATTTCAACAAATCACTACAGT...CCATCTTGCCTTTGTATACCAATCATCTGGACAAGGAGATTTCATCTCAAGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS TCA 90 bp GCAGGGCAGCCTGGAGGTTGGCCTGTGGCTCCAGGAGCTCCAGTTTaGTTGGCCCCAGGCAGTGAATGCTTGGAGGTGACAGGTACATCC +
Preference number: 5 (lower is better)
Translates to: AGQPGGWPVAPGAPV*LAPGSECLEVTGTS
Trigger: GGATGTACCTGTCACCTCCAAGCATTCACTGCCTGGGGCCAATCAAACTGGAGCTCCTGGAGCCACAGGCCAACCTCCAGGCTGCCCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 90 bp GTGTGGGCAGCGGGTTGGGGTACTGCAGTTGCTTCCTGTAGTCCGTaGGCAGTAGGTCGGGGTACAAGCCCATCACATGGGTGGGATCTG +
Preference number: 5 (lower is better)
Translates to: VWAAGWGTAVASCSP*AVGRGTSPSHGWDL
Trigger: CAGATCCCACCCATGTGATGGGCTTGTACCCCGACCTACTGCCCACGGACTACAGGAAGCAACTGCAGTACCCCAACCCGCTGCCCACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp CCTGCGGTCAGTGGGCTGGCAAGCTCTAGTGCTGGGCTCCCATGGGACTCTCCAGTCCTGGAGAAGCTGTaGGATTTGGGTTGCCATGGG +
Preference number: 5 (lower is better)
Translates to: PAVSGLASSSAGLPWDSPVLEKL*DLGCHG
Trigger: CCCATGGCAACCCAAATCCAACAGCTTCTCCAGGAC...TGGAGAGTCCCATGGGAGCCCAGCACTAGAGCTTGCCAGCCCACTGACCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp GTCCAGTTAATTCGGAGATGTTCCAGAGAGCAAGGTGGCCAGCATCGTCCCTGGAGGGCAGCCTGGAGGTaGGCCTGTGGCTCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: VQLIRRCSREQGGQHRPWRAAWR*ACGSRS
Trigger: GCTCCTGGAGCCACAGGCCAACCTCCAGGCTGCCCT...CCAGGGACGATGCTGGCCACCTTGCTCTCTGGAACATCTCCGAATTAACTGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 90 bp AGTGAGCCTTCTCCAGTTCAGCACCAGAGAGTGTGGGCAGCGGGTTaGGGTACTGCAGTTGCTTCCTGTAGTCCGTGGGCAGTAGGTCGG +
Preference number: 5 (lower is better)
Translates to: SEPSPVQHQRVWAAG*GTAVASCSPWAVGR
Trigger: CCGACCTACTGCCCACGGACTACAGGAAGCAACTGCAGTACCCCAACCCGCTGCCCACACTCTCTGGTGCTGAACTGGAGAAGGCTCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp ATGTGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTAGGGCAGCCTGGAGGTaGGCCTGTGGCTCCAGGAGC +
Preference number: 5 (lower is better)
Translates to: MCVPGVCSLQGQKLLCTSRAAWR*ACGSRS
Trigger: GCTCCTGGAGCCACAGGCCAACCTCCAGGCTGCCCT...AGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACACAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp AGAGAGATCCTGCCTAGACCACACACCCTGCACAGTGCTGCCCCGGGGAGGTACGGTGAGTTTGCTTTCTaGGACTGGTCCACTAGCACC +
Preference number: 5 (lower is better)
Translates to: REILPRPHTLHSAAPGRYGEFAF*DWSTST
Trigger: GGTGCTAGTGGACCAGTCCAAGAAAGCAAACTCACC...GTACCTCCCCGGGGCAGCACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp GCCGAGGCAGGCACTTCTAGAGAGATCCTGCCTAGACCACACACCCTGCACAGTGAGAAGCTGTTGGATTaGGGTTGCCATGGGGACAGG +
Preference number: 5 (lower is better)
Translates to: AEAGTSREILPRPHTLHSEKLLD*GCHGDR
Trigger: CCTGTCCCCATGGCAACCCAAATCCAACAGCTTCTC...ACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCTAGAAGTGCCTGCCTCGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp GGACTCTCCAGGCCGCCATGCTGGGGGAATCTTGTGAAGCTGTGTAGTTATTGTAGTGTGGGCAGCGGGTaGGGGTACTGCAGTTGCTTC +
Preference number: 5 (lower is better)
Translates to: GLSRPPCWGNLVKLCSYCSVGSG*GYCSCF
Trigger: GAAGCAACTGCAGTACCCCAACCCGCTGCCCACACT...ACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGAGAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp CCTGCGGTCAGTGGGCTGGCAAGCTCTAGTGCTGGGCTCCCATGGGACTCTCCATTCTCTATCAAGAAGTaGAGTACTCGATCTCGTGGC +
Preference number: 5 (lower is better)
Translates to: PAVSGLASSSAGLPWDSPFSIKK*STRSRG
Trigger: GCCACGAGATCGAGTACTCAACTTCTTGATAGAGAA...TGGAGAGTCCCATGGGAGCCCAGCACTAGAGCTTGCCAGCCCACTGACCGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS TCA 90 bp TTGATGGTGGGAGTGCCCTCCATGAGCGGGGAGGTGCTGGACTGGTaGTCCGAGTCATTCAGCTTCTTTACCAACTGGCTCCGTTTCTGT +
Preference number: 5 (lower is better)
Translates to: LMVGVPSMSGEVLDW*SESFSFFTNWLRFC
Trigger: ACAGAAACGGAGCCAGTTGGTAAAGAAGCTGAATGACTCGGATCACCAGTCCAGCACCTCCCCGCTCATGGAGGGCACTCCCACCATCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGAGTCCTGGAGAAGCTGTaGGATTTGGGTTGCCATGGG +
Preference number: 5 (lower is better)
Translates to: SLGWSYPVPSMKGRILGRVLEKL*DLGCHG
Trigger: CCCATGGCAACCCAAATCCAACAGCTTCTCCAGGAC...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp GCCGAGGCAGGCACTTCTAGAGAGATCCTGCCTAGACCACACACCCTGCACAGTATAGATGAAGAGAGCTaGTTCGTGCTTCCCCATGCG +
Preference number: 5 (lower is better)
Translates to: AEAGTSREILPRPHTLHSIDEES*FVLPHA
Trigger: CGCATGGGGAAGCACGAACAAGCTCTCTTCATCTAT...ACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCTAGAAGTGCCTGCCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp ATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGCCAGGCAGTGAATGCTaGGAGGTGACAGGTACATCC +
Preference number: 5 (lower is better)
Translates to: IILRLELPCSLYEGQDPGPGSEC*EVTGTS
Trigger: GGATGTACCTGTCACCTCCAAGCATTCACTGCCTGG...CCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp GCCGAGGCAGGCACTTCTAGAGAGATCCTGCCTAGACCACACACCCTGCACAGTCCCCATTGGGGTATCTaGCAAATGCACTGTTCCCAA +
Preference number: 5 (lower is better)
Translates to: AEAGTSREILPRPHTLHSPHWGI*QMHCSQ
Trigger: TTGGGAACAGTGCATTTGCAAGATACCCCAATGGGG...ACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCTAGAAGTGCCTGCCTCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS TCA 90 bp TGCTCCATGGCCACTGGGATGTCTGTCCAGTTCAGGGCGCATTTCTaGGTGCAGATGCCTTCCTCGTTAAGCACCACAGTCAGATCATCC +
Preference number: 5 (lower is better)
Translates to: CSMATGMSVQFRAHF*VQMPSSLSTTVRSS
Trigger: GGATGATCTGACTGTGGTGCTTAACGAGGAAGGCATCTGCACTCAGAAATGCGCCCTGAACTGGACAGACATCCCAGTGGCCATGGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS GCA 90 bp GAATTCTCTGTCCTTCCAGAAGTACAGCTGCAGCTTCTTCCTCACTaGCACACACATCCGCAACACCTCCTCACCCGTCTCAGTGTGCTG +
Preference number: 5 (lower is better)
Translates to: EFSVLPEVQLQLLPH*HTHPQHLLTRLSVL
Trigger: CAGCACACTGAGACGGGTGAGGAGGTGTTGCGGATGTGTGTGGCAGTGAGGAAGAAGCTGCAGCTGTACTTCTGGAAGGACAGAGAATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS GCA 90 bp AAGCCTTGGTTCCAGTGTTCGGATCTCCACGTATCGTGGCAACACTaGAACAATGTATGGAGGCTGGTGCTCCATGGCCACTGGGATGTC +
Preference number: 5 (lower is better)
Translates to: KPWFQCSDLHVSWQH*NNVWRLVLHGHWDV
Trigger: GACATCCCAGTGGCCATGGAGCACCAGCCTCCATACATTGTTGCAGTGTTGCCACGATACGTGGAGATCCGAACACTGGAACCAAGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 90 bp TTGGACCAGAAGCCTTGGTTCCAGTGTTCGGATCTCCACGTATCGTaGCAACACTGCAACAATGTATGGAGGCTGGTGCTCCATGGCCAC +
Preference number: 5 (lower is better)
Translates to: LDQKPWFQCSDLHVS*QHCNNVWRLVLHGH
Trigger: GTGGCCATGGAGCACCAGCCTCCATACATTGTTGCAGTGTTGCCACGATACGTGGAGATCCGAACACTGGAACCAAGGCTTCTGGTCCAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp GCCGAGGCAGGCACTTCTAGAGAGATCCTGCCTAGACCACACACCCTGCACAGTTTGCAACTCAATGCTTaGGACCAGAAGCCTTGGTTC +
Preference number: 5 (lower is better)
Translates to: AEAGTSREILPRPHTLHSLQLNA*DQKPWF
Trigger: GAACCAAGGCTTCTGGTCCAAAGCATTGAGTTGCAA...ACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCTAGAAGTGCCTGCCTCGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGAAGCTGGATCAGGCAATaGTGGAACTGTGAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: SLGWSYPVPSMKGRILGRSWIRQ*WNCEPV
Trigger: GACAGGCTCACAGTTCCACAATTGCCTGATCCAGCT...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp GTCCAGTTAATTCGGAGATGTTCCAGAGAGCAAGGTGGCCAGCATCGTCCCTGGAGCTGGATCAGGCAATaGTGGAACTGTGAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: VQLIRRCSREQGGQHRPWSWIRQ*WNCEPV
Trigger: GACAGGCTCACAGTTCCACAATTGCCTGATCCAGCT...CCAGGGACGATGCTGGCCACCTTGCTCTCTGGAACATCTCCGAATTAACTGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp ATGTGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTCCAGGCAGTGAATGCTaGGAGGTGACAGGTACATCC +
Preference number: 5 (lower is better)
Translates to: MCVPGVCSLQGQKLLCTSPGSEC*EVTGTS
Trigger: GGATGTACCTGTCACCTCCAAGCATTCACTGCCTGG...AGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACACAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS TCA 90 bp CAGGAGCTCCAGTTTGATTGGCCCCAGGCAGTGAATGCTTGGAGGTaGCAGGTACATCCGAAGCAGGGACAGATACACATCTTTGTTGCC +
Preference number: 5 (lower is better)
Translates to: QELQFDWPQAVNAWR*QVHPKQGQIHIFVA
Trigger: GGCAACAAAGATGTGTATCTGTCCCTGCTTCGGATGTACCTGTCACCTCCAAGCATTCACTGCCTGGGGCCAATCAAACTGGAGCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp ATGTGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTGTTGGGAAGAGCTCTTaGATGGACCCCTTTCCATCC +
Preference number: 5 (lower is better)
Translates to: MCVPGVCSLQGQKLLCTSVGKSS*MDPFPS
Trigger: GGATGGAAAGGGGTCCATCAAAGAGCTCTTCCCAAC...AGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp TCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTATTGGGAGAAGCTGTTGGATTaGGGTTGCCATGGGGACAGG +
Preference number: 5 (lower is better)
Translates to: SLPFLSAPQTCTPSHHYWEKLLD*GCHGDR
Trigger: CCTGTCCCCATGGCAACCCAAATCCAACAGCTTCTC...CCAATAGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGATTTGCTGGCAGAAGGTaGATTGCCTTGGTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: SLGWSYPVPSMKGRILGRFAGRR*IALVVS
Trigger: AGACACCACCAAGGCAATCAACCTTCTGCCAGCAAA...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS TCA 90 bp GCACCTGCAGAGCTTTCTCATGGAGCCCCTTCTTCTCATACAGGATaGTCAGCTCGCTGTACTTGTGAGCCTTCTTCAGCACATGCTCAC +
Preference number: 5 (lower is better)
Translates to: APAELSHGAPSSHTG*SARCTCEPSSAHAH
Trigger: GTGAGCATGTGCTGAAGAAGGCTCACAAGTACAGCGAGCTGATCATCCTGTATGAGAAGAAGGGGCTCCATGAGAAAGCTCTGCAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 90 bp CCAGTTCACCTCCTTCCTCTCCAGCAGGGACTGGACTTTTACCTGTaGGCAGCGACAGAAGGTAGTCTTTCATCAGACTCTGCACTTTCT +
Preference number: 5 (lower is better)
Translates to: PVHLLPLQQGLDFYL*AATEGSLSSDSALS
Trigger: AGAAAGTGCAGAGTCTGATGAAAGACTACCTTCTGTCGCTGCCCACAGGTAAAAGTCCAGTCCCTGCTGGAGAGGAAGGAGGTGAACTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp TGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCGAGAAGAAGATGCCCTaGCTTGGTTCCAACAAGAAG +
Preference number: 5 (lower is better)
Translates to: CVPGVCSLQGQKLLCTSCEKKMP*LGSNKK
Trigger: CTTCTTGTTGGAACCAAGCAAGGGCATCTTCTTCTC...GCAAGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp ATACTCAACAGAGCTGCTCCTGCATTACTCTTTGCCATTCCTCAGTGCCCCACACACCATGCCATGGACTaGGGCACATCTGGCACACTA +
Preference number: 5 (lower is better)
Translates to: ILNRAAPALLFAIPQCPTHHAMD*GTSGTL
Trigger: TAGTGTGCCAGATGTGCCCAAGTCCATGGCATGGTG...TGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAGCAGCTCTGTTGAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp ATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGGTTGGGAAGAGCTCTTaGATGGACCCCTTTCCATCC +
Preference number: 5 (lower is better)
Translates to: IEKQPPSSLGWSYPVPSMVGKSS*MDPFPS
Trigger: GGATGGAAAGGGGTCCATCAAAGAGCTCTTCCCAAC...CATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp ATGTGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTGCCAATTCAAACTGCTaGTCCTGGAGAAGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: MCVPGVCSLQGQKLLCTSANSNC*SWRSCW
Trigger: CCAACAGCTTCTCCAGGACAAGCAGTTTGAATTGGC...AGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp ATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAACTTCTTCTTGGACTaGATGGTGGGAGTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: IEKQPPSSLGWSYPVPSMNFFLD*MVGVPS
Trigger: GGAGGGCACTCCCACCATCAAGTCCAAGAAGAAGTT...CATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp ATGTGTGTGCCTGGTGTCTGTAGCCTCCAAGGCCAGAAGTTGCTGTGTACCTCTTGCACAACCACCCCATaGGGGTATCTTGCAAATGCA +
Preference number: 5 (lower is better)
Translates to: MCVPGVCSLQGQKLLCTSCTTTP*GYLANA
Trigger: TGCATTTGCAAGATACCCCAATGGGGTGGTTGTGCA...AGAGGTACACAGCAACTTCTGGCCTTGGAGGCTACAGACACCAGGCACACACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS TCA 90 bp CTGCACTTTCTCACAGTACAGCTGGATCAGGCAATTGTGGAACTGTaGGCCTGTCTCCTCCCACACGTGGATGATGTGTTCCAGATAAGG +
Preference number: 5 (lower is better)
Translates to: LHFLTVQLDQAIVEL*ACLLPHVDDVFQIR
Trigger: CCTTATCTGGAACACATCATCCACGTGTGGGAGGAGACAGGCTCACAGTTCCACAATTGCCTGATCCAGCTGTACTGTGAGAAAGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS GCA 90 bp AAGCCCATCACATGGGTGGGATCTGTGCCAAGTTTAGCAAAGACCTaGATGGACTCATCAAAGCGCTTCTGGCAGAAGAGGTTGAAGGCA +
Preference number: 5 (lower is better)
Translates to: KPITWVGSVPSLAKT*MDSSKRFWQKRLKA
Trigger: TGCCTTCAACCTCTTCTGCCAGAAGCGCTTTGATGAGTCCATGCAGGTCTTTGCTAAACTTGGCACAGATCCCACCCATGTGATGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 90 bp AATGAAGCGAGGCCTTTGCAACTCAATGCTTTGGACCAGAAGCCTTaGTTCCAGTGTTCGGATCTCCACGTATCGTGGCAACACTGCAAC +
Preference number: 5 (lower is better)
Translates to: NEARPLQLNALDQKP*FQCSDLHVSWQHCN
Trigger: GTTGCAGTGTTGCCACGATACGTGGAGATCCGAACACTGGAACCAAGGCTTCTGGTCCAAAGCATTGAGTTGCAAAGGCCTCGCTTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 90 bp GATCCCCCTGATGTAATGAAGCGAGGCCTTTGCAACTCAATGCTTTaGACCAGAAGCCTTGGTTCCAGTGTTCGGATCTCCACGTATCGT +
Preference number: 5 (lower is better)
Translates to: DPPDVMKRGLCNSML*TRSLGSSVRISTYR
Trigger: ACGATACGTGGAGATCCGAACACTGGAACCAAGGCTTCTGGTCCAAAGCATTGAGTTGCAAAGGCCTCGCTTCATTACATCAGGGGGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 90 bp ATCAGACTCTGCACTTTCTCACAGTACAGCTGGATCAGGCAATTGTaGAACTGTGAGCCTGTCTCCTCCCACACGTGGATGATGTGTTCC +
Preference number: 5 (lower is better)
Translates to: IRLCTFSQYSWIRQL*NCEPVSSHTWMMCS
Trigger: GGAACACATCATCCACGTGTGGGAGGAGACAGGCTCACAGTTCCACAATTGCCTGATCCAGCTGTACTGTGAGAAAGTGCAGAGTCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp ATACTCAACAGAGCTGCTCCTGCATTACTCTTTGCCATTCCTCAGTGCCCCACAAACAGTGATGCGCCCTaGGCCTTTGAGACTGTAGTG +
Preference number: 5 (lower is better)
Translates to: ILNRAAPALLFAIPQCPTNSDAP*AFETVV
Trigger: CACTACAGTCTCAAAGGCCAAGGGCGCATCACTGTT...TGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAGCAGCTCTGTTGAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp TCATCACTATTGGTTTCTGGTCAGCTGTTCCCTGTGTGCAGTGAGACATACTTTAGTGTGGGCAGCGGGTaGGGGTACTGCAGTTGCTTC +
Preference number: 5 (lower is better)
Translates to: SSLLVSGQLFPVCSETYFSVGSG*GYCSCF
Trigger: GAAGCAACTGCAGTACCCCAACCCGCTGCCCACACT...AAAGTATGTCTCACTGCACACAGGGAACAGCTGACCAGAAACCAATAGTGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp ATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTAACTTCTTCTTGGACTaGATGGTGGGAGTGCCCTCC +
Preference number: 5 (lower is better)
Translates to: ITLCHSSVPHKPARHLITNFFLD*MVGVPS
Trigger: GGAGGGCACTCCCACCATCAAGTCCAAGAAGAAGTT...AGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp TCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGAAGAGTTGCCTTCTTTGTTTaGGTCGTAGTGTTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: SLGWSYPVPSMKGRILGRVAFFV*VVVFVA
Trigger: TGCCACAAACACTACGACCAAAACAAAGAAGGCAAC...TCTTCCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp CTGCATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATTGCACAACCACCCCATaGGGGTATCTTGCAAATGCA +
Preference number: 5 (lower is better)
Translates to: LHYSLPFLSAPQTCTPSHCTTTP*GYLANA
Trigger: TGCATTTGCAAGATACCCCAATGGGGTGGTTGTGCA...ATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp CTGCATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATGAGAAGAAGATGCCCTaGCTTGGTTCCAACAAGAAG +
Preference number: 5 (lower is better)
Translates to: LHYSLPFLSAPQTCTPSHEKKMP*LGSNKK
Trigger: CTTCTTGTTGGAACCAAGCAAGGGCATCTTCTTCTC...ATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp GCCGAGGCAGGCACTTCTAGAGAGATCCTGCCTAGACCACACACCCTGCACAGTTTGGAAAAGTTCTTATaGGACTTCTCTAGTGTTACC +
Preference number: 5 (lower is better)
Translates to: AEAGTSREILPRPHTLHSLEKFL*DFSSVT
Trigger: GGTAACACTAGAGAAGTCCAATAAGAACTTTTCCAA...ACTGTGCAGGGTGTGTGGTCTAGGCAGGATCTCTCTAGAAGTGCCTGCCTCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp ATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGTTCTGGCAGAAGAGGTaGAAGGCATACAAGTTCTTA +
Preference number: 5 (lower is better)
Translates to: IILRLELPCSLYEGQDPGFWQKR*KAYKFL
Trigger: TAAGAACTTGTATGCCTTCAACCTCTTCTGCCAGAA...CCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp ATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGAAGGGCAGGATCCTGGGGGAATGGCTAGAGCCTaGAAATTCTCTATCAAGAAG +
Preference number: 5 (lower is better)
Translates to: IILRLELPCSLYEGQDPGGMARA*KFSIKK
Trigger: CTTCTTGATAGAGAATTTCAAGGCTCTAGCCATTCC...CCCAGGATCCTGCCCTTCATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp CTTCTAGTAAAAAGCCGGCAATGCCAGGTCACAAGTCCAGTTAATTCGGAGATGAACAGTGATGCGCCCTaGGCCTTTGAGACTGTAGTG +
Preference number: 5 (lower is better)
Translates to: LLVKSRQCQVTSPVNSEMNSDAP*AFETVV
Trigger: CACTACAGTCTCAAAGGCCAAGGGCGCATCACTGTT...CATCTCCGAATTAACTGGACTTGTGACCTGGCATTGCCGGCTTTTTACTAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp ATACTCAACAGAGCTGCTCCTGCATTACTCTTTGCCATTCCTCAGTGCCCCACATTGCAACTCAATGCTTaGGACCAGAAGCCTTGGTTC +
Preference number: 5 (lower is better)
Translates to: ILNRAAPALLFAIPQCPTLQLNA*DQKPWF
Trigger: GAACCAAGGCTTCTGGTCCAAAGCATTGAGTTGCAA...TGTGGGGCACTGAGGAATGGCAAAGAGTAATGCAGGAGCAGCTCTGTTGAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp CTTCTAGTAAAAAGCCGGCAATGCCAGGTCACAAGTCCAGTTAATTCGGAGATGGGTGAGTTTGCTTTCTaGGACTGGTCCACTAGCACC +
Preference number: 5 (lower is better)
Translates to: LLVKSRQCQVTSPVNSEMGEFAF*DWSTST
Trigger: GGTGCTAGTGGACCAGTCCAAGAAAGCAAACTCACC...CATCTCCGAATTAACTGGACTTGTGACCTGGCATTGCCGGCTTTTTACTAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp GTCCAGTTAATTCGGAGATGTTCCAGAGAGCAAGGTGGCCAGCATCGTCCCTGGGACAGATACACATCTTaGTTGCCTTCTTTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: VQLIRRCSREQGGQHRPWDRYTS*LPSLFW
Trigger: CCAAAACAAAGAAGGCAACAAAGATGTGTATCTGTC...CCAGGGACGATGCTGGCCACCTTGCTCTCTGGAACATCTCCGAATTAACTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS GCA 90 bp AGCCAATTCAAACTGCTTGTCCTGGAGAAGCTGTTGGATTTGGGTTaGCATGGGGACAGGAATGAGTCTCCAAACAAAATGATTGCTGGC +
Preference number: 5 (lower is better)
Translates to: SQFKLLVLEKLLDLG*HGDRNESPNKMIAG
Trigger: GCCAGCAATCATTTTGTTTGGAGACTCATTCCTGTCCCCATGGCAACCCAAATCCAACAGCTTCTCCAGGACAAGCAGTTTGAATTGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp AGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACCACCATGCCATGGACTaGGGCACATCTGGCACACTA +
Preference number: 5 (lower is better)
Translates to: SMHTTQEKIQALFYCFKHHHAMD*GTSGTL
Trigger: TAGTGTGCCAGATGTGCCCAAGTCCATGGCATGGTG...GTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp CTTCTAGTAAAAAGCCGGCAATGCCAGGTCACAAGTCCAGTTAATTCGGAGATGGCCAATTCAAACTGCTaGTCCTGGAGAAGCTGTTGG +
Preference number: 5 (lower is better)
Translates to: LLVKSRQCQVTSPVNSEMANSNC*SWRSCW
Trigger: CCAACAGCTTCTCCAGGACAAGCAGTTTGAATTGGC...CATCTCCGAATTAACTGGACTTGTGACCTGGCATTGCCGGCTTTTTACTAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp ATTACTCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTTTCTCTATCAAGAAGTaGAGTACTCGATCTCGTGGC +
Preference number: 5 (lower is better)
Translates to: ITLCHSSVPHKPARHLITFSIKK*STRSRG
Trigger: GCCACGAGATCGAGTACTCAACTTCTTGATAGAGAA...AGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGAGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp TCTTTGCCATTCCTCAGTGCCCCACAAACCTGCACGCCATCTCATCACTATTGGGGAATGGCTAGAGCCTaGAAATTCTCTATCAAGAAG +
Preference number: 5 (lower is better)
Translates to: SLPFLSAPQTCTPSHHYWGMARA*KFSIKK
Trigger: CTTCTTGATAGAGAATTTCAAGGCTCTAGCCATTCC...CCAATAGTGATGAGATGGCGTGCAGGTTTGTGGGGCACTGAGGAATGGCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp CTTCTAGTAAAAAGCCGGCAATGCCAGGTCACAAGTCCAGTTAATTCGGAGATGCCCCATTGGGGTATCTaGCAAATGCACTGTTCCCAA +
Preference number: 5 (lower is better)
Translates to: LLVKSRQCQVTSPVNSEMPHWGI*QMHCSQ
Trigger: TTGGGAACAGTGCATTTGCAAGATACCCCAATGGGG...CATCTCCGAATTAACTGGACTTGTGACCTGGCATTGCCGGCTTTTTACTAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp GGACTCTCCAGGCCGCCATGCTGGGGGAATCTTGTGAAGCTGTGTAGTTATTGTATCTGCTGGATCTTTTaGGAAAAGTTCTTATTGGAC +
Preference number: 5 (lower is better)
Translates to: GLSRPPCWGNLVKLCSYCICWIF*EKFLLD
Trigger: GTCCAATAAGAACTTTTCCAAAAAGATCCAGCAGAT...ACAATAACTACACAGCTTCACAAGATTCCCCCAGCATGGCGGCCTGGAGAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 90 bp CTGAGTTTACCTCTTTGGAGCAGAAGTAGTGCACAACCACCCCATTaGGGTATCTTGCAAATGCACTGTTCCCAATCTTCTTCTTGCATA +
Preference number: 5 (lower is better)
Translates to: LSLPLWSRSSAQPPH*GILQMHCSQSSSCI
Trigger: TATGCAAGAAGAAGATTGGGAACAGTGCATTTGCAAGATACCCCAATGGGGTGGTTGTGCACTACTTCTGCTCCAAAGAGGTAAACTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp ATTGAGAAGCAGCCTCCATCATCCTTAGGCTGGAGCTACCCTGTTCCCTCTATGTTGGAAAAGTTCTTATaGGACTTCTCTAGTGTTACC +
Preference number: 5 (lower is better)
Translates to: IEKQPPSSLGWSYPVPSMLEKFL*DFSSVT
Trigger: GGTAACACTAGAGAAGTCCAATAAGAACTTTTCCAA...CATAGAGGGAACAGGGTAGCTCCAGCCTAAGGATGATGGAGGCTGCTTCTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp TCATCACTATTGGTTTCTGGTCAGCTGTTCCCTGTGTGCAGTGAGACATACTTTAATGAAGCGAGGCCTTaGCAACTCAATGCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: SSLLVSGQLFPVCSETYFNEARP*QLNALD
Trigger: GTCCAAAGCATTGAGTTGCAAAGGCCTCGCTTCATT...AAAGTATGTCTCACTGCACACAGGGAACAGCTGACCAGAAACCAATAGTGATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp CTTCTAGTAAAAAGCCGGCAATGCCAGGTCACAAGTCCAGTTAATTCGGAGATGGTTGCCTTCTTTGTTTaGGTCGTAGTGTTTGTGGCA +
Preference number: 5 (lower is better)
Translates to: LLVKSRQCQVTSPVNSEMVAFFV*VVVFVA
Trigger: TGCCACAAACACTACGACCAAAACAAAGAAGGCAAC...CATCTCCGAATTAACTGGACTTGTGACCTGGCATTGCCGGCTTTTTACTAGAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp AGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACTTTGCTGGCAGAAGGTaGATTGCCTTGGTGGTGTCT +
Preference number: 5 (lower is better)
Translates to: SMHTTQEKIQALFYCFKHFAGRR*IALVVS
Trigger: AGACACCACCAAGGCAATCAACCTTCTGCCAGCAAA...GTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS TCA 90 bp AAGCGCTTCTGGCAGAAGAGGTTGAAGGCATACAAGTTCTTAATGTaGTGGATCTGCTGCTGCTTTTCACTGTCTGAGTCATCTTTCATC +
Preference number: 5 (lower is better)
Translates to: KRFWQKRLKAYKFLM*WICCCFSLSESSFI
Trigger: GATGAAAGATGACTCAGACAGTGAAAAGCAGCAGCAGATCCATCACATTAAGAACTTGTATGCCTTCAACCTCTTCTGCCAGAAGCGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp CACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACAGTTCAAATGAAGCGAGGCCTTaGCAACTCAATGCTTTGGAC +
Preference number: 5 (lower is better)
Translates to: HTTQEKIQALFYCFKHSSNEARP*QLNALD
Trigger: GTCCAAAGCATTGAGTTGCAAAGGCCTCGCTTCATT...TGAACTGTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp AGGGAAACAGAATTAAGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCATAGATGAAGAGAGCTaGTTCGTGCTTCCCCATGCG +
Preference number: 5 (lower is better)
Translates to: RETELSMHTTQEKIQALFIDEES*FVLPHA
Trigger: CGCATGGGGAAGCACGAACAAGCTCTCTTCATCTAT...GAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACTTAATTCTGTTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp CACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACAGTTCATTCTGGCAGAAGAGGTaGAAGGCATACAAGTTCTTA +
Preference number: 5 (lower is better)
Translates to: HTTQEKIQALFYCFKHSSFWQKR*KAYKFL
Trigger: TAAGAACTTGTATGCCTTCAACCTCTTCTGCCAGAA...TGAACTGTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp AGGGAAACAGAATTAAGTATGCACACCACCCAGGAGAAAATACAGGCTTTATTCCTTTCAAAGGTGAGTTaGCTTTCTTGGACTGGTCCA +
Preference number: 5 (lower is better)
Translates to: RETELSMHTTQEKIQALFLSKVS*LSWTGP
Trigger: TGGACCAGTCCAAGAAAGCAAACTCACCTTTGAAAG...GAATAAAGCCTGTATTTTCTCCTGGGTGGTGTGCATACTTAATTCTGTTTCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp ACACTTGAGATGAAATCTCCTTGTCCAGATGATTGGTATACAAAGGCAAGATGGCTTTCAAAGGTGAGTTaGCTTTCTTGGACTGGTCCA +
Preference number: 5 (lower is better)
Translates to: TLEMKSPCPDDWYTKARWLSKVS*LSWTGP
Trigger: TGGACCAGTCCAAGAAAGCAAACTCACCTTTGAAAG...CCATCTTGCCTTTGTATACCAATCATCTGGACAAGGAGATTTCATCTCAAGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS-3UTR CAA 90 bp CACACCACCCAGGAGAAAATACAGGCTTTATTCTACTGCTTCAAACACAGTTCAGACAGATACACATCTTaGTTGCCTTCTTTGTTTTGG +
Preference number: 5 (lower is better)
Translates to: HTTQEKIQALFYCFKHSSDRYTS*LPSLFW
Trigger: CCAAAACAAAGAAGGCAACAAAGATGTGTATCTGTC...TGAACTGTGTTTGAAGCAGTAGAATAAAGCCTGTATTTTCTCCTGGGTGGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 72 bp GCGGGTTGGGGTACTGCAGTTGCTTCCTGTAGTCCGTaGGCAGTAGGTCGGGGTACAAGCCCATCACATGGG +
Preference number: 6 (lower is better)
Translates to: AGWGTAVASCSP*AVGRGTSPSHG
Trigger: CCCATGTGATGGGCTTGTACCCCGACCTACTGCCCACGGACTACAGGAAGCAACTGCAGTACCCCAACCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS TCA 72 bp CCTGGAGGTTGGCCTGTGGCTCCAGGAGCTCCAGTTTaGTTGGCCCCAGGCAGTGAATGCTTGGAGGTGACA +
Preference number: 6 (lower is better)
Translates to: PGGWPVAPGAPV*LAPGSECLEVT
Trigger: TGTCACCTCCAAGCATTCACTGCCTGGGGCCAATCAAACTGGAGCTCCTGGAGCCACAGGCCAACCTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 72 bp TCTCCAGTTCAGCACCAGAGAGTGTGGGCAGCGGGTTaGGGTACTGCAGTTGCTTCCTGTAGTCCGTGGGCA +
Preference number: 6 (lower is better)
Translates to: SPVQHQRVWAAG*GTAVASCSPWA
Trigger: TGCCCACGGACTACAGGAAGCAACTGCAGTACCCCAACCCGCTGCCCACACTCTCTGGTGCTGAACTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS TCA 72 bp GGAGTGCCCTCCATGAGCGGGGAGGTGCTGGACTGGTaGTCCGAGTCATTCAGCTTCTTTACCAACTGGCTC +
Preference number: 6 (lower is better)
Translates to: GVPSMSGEVLDW*SESFSFFTNWL
Trigger: GAGCCAGTTGGTAAAGAAGCTGAATGACTCGGATCACCAGTCCAGCACCTCCCCGCTCATGGAGGGCACTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 72 bp CTAAGTGAGCCTTCTCCAGTTCAGCACCAGAGAGTGTaGGCAGCGGGTTGGGGTACTGCAGTTGCTTCCTGT +
Preference number: 6 (lower is better)
Translates to: LSEPSPVQHQRV*AAGWGTAVASC
Trigger: ACAGGAAGCAACTGCAGTACCCCAACCCGCTGCCCACACTCTCTGGTGCTGAACTGGAGAAGGCTCACTTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS GCA 72 bp TTCCAGTGTTCGGATCTCCACGTATCGTGGCAACACTaGAACAATGTATGGAGGCTGGTGCTCCATGGCCAC +
Preference number: 6 (lower is better)
Translates to: FQCSDLHVSWQH*NNVWRLVLHGH
Trigger: GTGGCCATGGAGCACCAGCCTCCATACATTGTTGCAGTGTTGCCACGATACGTGGAGATCCGAACACTGGAA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 72 bp TGCAACAATGTATGGAGGCTGGTGCTCCATGGCCACTaGGATGTCTGTCCAGTTCAGGGCGCATTTCTGAGT +
Preference number: 6 (lower is better)
Translates to: CNNVWRLVLHGH*DVCPVQGAFLS
Trigger: ACTCAGAAATGCGCCCTGAACTGGACAGACATCCCAGTGGCCATGGAGCACCAGCCTCCATACATTGTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CAA 72 bp CTCTGCACTTTCTCACAGTACAGCTGGATCAGGCAATaGTGGAACTGTGAGCCTGTCTCCTCCCACACGTGG +
Preference number: 6 (lower is better)
Translates to: LCTFSQYSWIRQ*WNCEPVSSHTW
Trigger: CCACGTGTGGGAGGAGACAGGCTCACAGTTCCACAATTGCCTGATCCAGCTGTACTGTGAGAAAGTGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CAA 72 bp TGTGTCCTTCAAGACGTGGACATAGATGAAGAGAGCTaGTTCGTGCTTCCCCATGCGCCCCAACAGGAGAGC +
Preference number: 6 (lower is better)
Translates to: CVLQDVDIDEES*FVLPHAPQQES
Trigger: GCTCTCCTGTTGGGGCGCATGGGGAAGCACGAACAAGCTCTCTTCATCTATGTCCACGTCTTGAAGGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CAA 90 bp AGCCATCTTTGTGTCCTTCAAGACGTGGACATAGATGAAGAGAGCTaGTTCGTGCTTCCCCATGCGCCCCAACAGGAGAGCTCGCTCTTC +
Preference number: 6 (lower is better)
Translates to: SHLCVLQDVDIDEES*FVLPHAPQQESSLF
Trigger: GAAGAGCGAGCTCTCCTGTTGGGGCGCATGGGGAAGCACGAACAAGCTCTCTTCATCTATGTCCACGTCTTGAAGGACACAAAGATGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS TCA 72 bp CTCACAGTACAGCTGGATCAGGCAATTGTGGAACTGTaGGCCTGTCTCCTCCCACACGTGGATGATGTGTTC +
Preference number: 6 (lower is better)
Translates to: LTVQLDQAIVEL*ACLLPHVDDVF
Trigger: GAACACATCATCCACGTGTGGGAGGAGACAGGCTCACAGTTCCACAATTGCCTGATCCAGCTGTACTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS TCA 72 bp CAGTTTGATTGGCCCCAGGCAGTGAATGCTTGGAGGTaGCAGGTACATCCGAAGCAGGGACAGATACACATC +
Preference number: 6 (lower is better)
Translates to: QFDWPQAVNAWR*QVHPKQGQIHI
Trigger: GATGTGTATCTGTCCCTGCTTCGGATGTACCTGTCACCTCCAAGCATTCACTGCCTGGGGCCAATCAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 72 bp AAGCCTTGGTTCCAGTGTTCGGATCTCCACGTATCGTaGCAACACTGCAACAATGTATGGAGGCTGGTGCTC +
Preference number: 6 (lower is better)
Translates to: KPWFQCSDLHVS*QHCNNVWRLVL
Trigger: GAGCACCAGCCTCCATACATTGTTGCAGTGTTGCCACGATACGTGGAGATCCGAACACTGGAACCAAGGCTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 72 bp TGCACTTTCTCACAGTACAGCTGGATCAGGCAATTGTaGAACTGTGAGCCTGTCTCCTCCCACACGTGGATG +
Preference number: 6 (lower is better)
Translates to: CTFSQYSWIRQL*NCEPVSSHTWM
Trigger: CATCCACGTGTGGGAGGAGACAGGCTCACAGTTCCACAATTGCCTGATCCAGCTGTACTGTGAGAAAGTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CAA 72 bp GAGGCCTTTGCAACTCAATGCTTTGGACCAGAAGCCTaGGTTCCAGTGTTCGGATCTCCACGTATCGTGGCA +
Preference number: 6 (lower is better)
Translates to: EAFATQCFGPEA*VPVFGSPRIVA
Trigger: TGCCACGATACGTGGAGATCCGAACACTGGAACCAAGGCTTCTGGTCCAAAGCATTGAGTTGCAAAGGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CAA 90 bp GAGTCATCTTTCATCTCCGCGAGCTGCAGAGCCAATTCAAACTGCTaGTCCTGGAGAAGCTGTTGGATTTGGGTTGCCATGGGGACAGGA +
Preference number: 6 (lower is better)
Translates to: ESSFISASCRANSNC*SWRSCWIWVAMGTG
Trigger: TCCTGTCCCCATGGCAACCCAAATCCAACAGCTTCTCCAGGACAAGCAGTTTGAATTGGCTCTGCAGCTCGCGGAGATGAAAGATGACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CAA 90 bp CGCGAGCTGCAGAGCCAATTCAAACTGCTTGTCCTGGAGAAGCTGTaGGATTTGGGTTGCCATGGGGACAGGAATGAGTCTCCAAACAAA +
Preference number: 6 (lower is better)
Translates to: RELQSQFKLLVLEKL*DLGCHGDRNESPNK
Trigger: TTTGTTTGGAGACTCATTCCTGTCCCCATGGCAACCCAAATCCAACAGCTTCTCCAGGACAAGCAGTTTGAATTGGCTCTGCAGCTCGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS GCA 72 bp ACATGGGTGGGATCTGTGCCAAGTTTAGCAAAGACCTaGATGGACTCATCAAAGCGCTTCTGGCAGAAGAGG +
Preference number: 6 (lower is better)
Translates to: TWVGSVPSLAKT*MDSSKRFWQKR
Trigger: CCTCTTCTGCCAGAAGCGCTTTGATGAGTCCATGCAGGTCTTTGCTAAACTTGGCACAGATCCCACCCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 72 bp AGGCCTTTGCAACTCAATGCTTTGGACCAGAAGCCTTaGTTCCAGTGTTCGGATCTCCACGTATCGTGGCAA +
Preference number: 6 (lower is better)
Translates to: RPLQLNALDQKP*FQCSDLHVSWQ
Trigger: TTGCCACGATACGTGGAGATCCGAACACTGGAACCAAGGCTTCTGGTCCAAAGCATTGAGTTGCAAAGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 72 bp GTGCCTAAATGCTGCAGATACTGCACCGTCCTCTCGTaGCCTTTCAAAGGTGAGTTTGCTTTCTTGGACTGG +
Preference number: 6 (lower is better)
Translates to: VPKCCRYCTVLS*PFKGEFAFLDW
Trigger: CCAGTCCAAGAAAGCAAACTCACCTTTGAAAGGCCACGAGAGGACGGTGCAGTATCTGCAGCATTTAGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CAA 72 bp TTCATCTCCGCGAGCTGCAGAGCCAATTCAAACTGCTaGTCCTGGAGAAGCTGTTGGATTTGGGTTGCCATG +
Preference number: 6 (lower is better)
Translates to: FISASCRANSNC*SWRSCWIWVAM
Trigger: CATGGCAACCCAAATCCAACAGCTTCTCCAGGACAAGCAGTTTGAATTGGCTCTGCAGCTCGCGGAGATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CAA 90 bp TTCATCAGACTCTGCACTTTCTCACAGTACAGCTGGATCAGGCAATaGTGGAACTGTGAGCCTGTCTCCTCCCACACGTGGATGATGTGT +
Preference number: 6 (lower is better)
Translates to: FIRLCTFSQYSWIRQ*WNCEPVSSHTWMMC
Trigger: ACACATCATCCACGTGTGGGAGGAGACAGGCTCACAGTTCCACAATTGCCTGATCCAGCTGTACTGTGAGAAAGTGCAGAGTCTGATGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS TCA 72 bp TTACCAACTGGCTCCGTTTCTGTGTCAGGTAGTCAATaGGAGCTAAGTGAGCCTTCTCCAGTTCAGCACCAG +
Preference number: 6 (lower is better)
Translates to: LPTGSVSVSGSQ*ELSEPSPVQHQ
Trigger: CTGGTGCTGAACTGGAGAAGGCTCACTTAGCTCTCATTGACTACCTGACACAGAAACGGAGCCAGTTGGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS TCA 72 bp GCTCTTCTAAGAGGCCATCAAAGGGAAAATCACAGATaGGCCGGCCTGGATCATAGTGGCTGGAAATCTCCA +
Preference number: 6 (lower is better)
Translates to: ALLRGHQRENHR*AGLDHSGWKSP
Trigger: TGGAGATTTCCAGCCACTATGATCCAGGCCGGCTCATCTGTGATTTTCCCTTTGATGGCCTCTTAGAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 72 bp GATGTAATGAAGCGAGGCCTTTGCAACTCAATGCTTTaGACCAGAAGCCTTGGTTCCAGTGTTCGGATCTCC +
Preference number: 6 (lower is better)
Translates to: DVMKRGLCNSML*TRSLGSSVRIS
Trigger: GGAGATCCGAACACTGGAACCAAGGCTTCTGGTCCAAAGCATTGAGTTGCAAAGGCCTCGCTTCATTACATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 72 bp GAGGCCATCAAAGGGAAAATCACAGATGAGCCGGCCTaGATCATAGTGGCTGGAAATCTCCAAGAACATGAG +
Preference number: 6 (lower is better)
Translates to: EAIKGKITDEPA*IIVAGNLQEHE
Trigger: CTCATGTTCTTGGAGATTTCCAGCCACTATGATCCAGGCCGGCTCATCTGTGATTTTCCCTTTGATGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CAA 72 bp AACATCCTTCCGAATCCTGTAGAGAAGAAGATGCCCTaGCTTGGTTCCAACAAGAAGCCATTCCTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: NILPNPVEKKMP*LGSNKKPFLPG
Trigger: GCCTGGGAGGAATGGCTTCTTGTTGGAACCAAGCAAGGGCATCTTCTTCTCTACAGGATTCGGAAGGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CAA 72 bp CCAACGCAGATAGAATTTTCACACCATGCCATGGACTaGGGCACATCTGGCACACTAAAGTCTCCCTGCAGT +
Preference number: 6 (lower is better)
Translates to: PTQIEFSHHAMD*GTSGTLKSPCS
Trigger: ACTGCAGGGAGACTTTAGTGTGCCAGATGTGCCCAAGTCCATGGCATGGTGTGAAAATTCTATCTGCGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CAA 72 bp CAGAGCCAATTCAAACTGCTTGTCCTGGAGAAGCTGTaGGATTTGGGTTGCCATGGGGACAGGAATGAGTCT +
Preference number: 6 (lower is better)
Translates to: QSQFKLLVLEKL*DLGCHGDRNES
Trigger: AGACTCATTCCTGTCCCCATGGCAACCCAAATCCAACAGCTTCTCCAGGACAAGCAGTTTGAATTGGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS TCA 72 bp TGTTACCTCAAACCTGTTACAACTGCCGCTTTCAGGTaGGGCTACATCTGCTGGCACAACATCCTTCCGAAT +
Preference number: 6 (lower is better)
Translates to: CYLKPVTTAAFR*GYICWHNILPN
Trigger: ATTCGGAAGGATGTTGTGCCAGCAGATGTAGCCTCACCTGAAAGCGGCAGTTGTAACAGGTTTGAGGTAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000102501.10
CDS GCA 72 bp ATGTTTGATCCCCCTGATGTAATGAAGCGAGGCCTTTaGAACTCAATGCTTTGGACCAGAAGCCTTGGTTCC +
Preference number: 6 (lower is better)
Translates to: MFDPPDVMKRGL*NSMLWTRSLGS
Trigger: GGAACCAAGGCTTCTGGTCCAAAGCATTGAGTTGCAAAGGCCTCGCTTCATTACATCAGGGGGATCAAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 72 bp AGAATTTTCACACCATGCCATGGACTTGGGCACATCTaGCACACTAAAGTCTCCCTGCAGTTCGTGGAATTC +
Preference number: 6 (lower is better)
Translates to: RIFTPCHGLGHI*HTKVSLQFVEF
Trigger: GAATTCCACGAACTGCAGGGAGACTTTAGTGTGCCAGATGTGCCCAAGTCCATGGCATGGTGTGAAAATTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 72 bp TCTTTCATCAGACTCTGCACTTTCTCACAGTACAGCTaGATCAGGCAATTGTGGAACTGTGAGCCTGTCTCC +
Preference number: 6 (lower is better)
Translates to: SFIRLCTFSQYS*IRQLWNCEPVS
Trigger: GGAGACAGGCTCACAGTTCCACAATTGCCTGATCCAGCTGTACTGTGAGAAAGTGCAGAGTCTGATGAAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 72 bp CCTCTTTGGAGCAGAAGTAGTGCACAACCACCCCATTaGGGTATCTTGCAAATGCACTGTTCCCAATCTTCT +
Preference number: 6 (lower is better)
Translates to: PLWSRSSAQPPH*GILQMHCSQSS
Trigger: AGAAGATTGGGAACAGTGCATTTGCAAGATACCCCAATGGGGTGGTTGTGCACTACTTCTGCTCCAAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CAA 72 bp CAATTCAAACTGCTTGTCCTGGAGAAGCTGTTGGATTaGGGTTGCCATGGGGACAGGAATGAGTCTCCAAAC +
Preference number: 6 (lower is better)
Translates to: QFKLLVLEKLLD*GCHGDRNESPN
Trigger: GTTTGGAGACTCATTCCTGTCCCCATGGCAACCCAAATCCAACAGCTTCTCCAGGACAAGCAGTTTGAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CAA 90 bp CTCTTGAAACCAACGCAGATAGAATTTTCACACCATGCCATGGACTaGGGCACATCTGGCACACTAAAGTCTCCCTGCAGTTCGTGGAAT +
Preference number: 6 (lower is better)
Translates to: LLKPTQIEFSHHAMD*GTSGTLKSPCSSWN
Trigger: ATTCCACGAACTGCAGGGAGACTTTAGTGTGCCAGATGTGCCCAAGTCCATGGCATGGTGTGAAAATTCTATCTGCGTTGGTTTCAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CAA 90 bp CTGCAGAGCCAATTCAAACTGCTTGTCCTGGAGAAGCTGTTGGATTaGGGTTGCCATGGGGACAGGAATGAGTCTCCAAACAAAATGATT +
Preference number: 6 (lower is better)
Translates to: LQSQFKLLVLEKLLD*GCHGDRNESPNKMI
Trigger: AATCATTTTGTTTGGAGACTCATTCCTGTCCCCATGGCAACCCAAATCCAACAGCTTCTCCAGGACAAGCAGTTTGAATTGGCTCTGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS TCA 72 bp TTCTTCTCATACAGGATGATCAGCTCGCTGTACTTGTaGGCCTTCTTCAGCACATGCTCACTCTCCTCGATA +
Preference number: 6 (lower is better)
Translates to: FFSYRMISSLYL*AFFSTCSLSSI
Trigger: TATCGAGGAGAGTGAGCATGTGCTGAAGAAGGCTCACAAGTACAGCGAGCTGATCATCCTGTATGAGAAGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 72 bp GAAATTCTCTATCAAGAAGTTGAGTACTCGATCTCGTaGCAGAGACTCTACCTCCGGGAGGTCTTCAGTGAA +
Preference number: 6 (lower is better)
Translates to: EILYQEVEYSIS*QRLYLREVFSE
Trigger: TTCACTGAAGACCTCCCGGAGGTAGAGTCTCTGCCACGAGATCGAGTACTCAACTTCTTGATAGAGAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CAA 72 bp GGAATGGCTAGAGCCTTGAAATTCTCTATCAAGAAGTaGAGTACTCGATCTCGTGGCAGAGACTCTACCTCC +
Preference number: 6 (lower is better)
Translates to: GMARALKFSIKK*STRSRGRDSTS
Trigger: GGAGGTAGAGTCTCTGCCACGAGATCGAGTACTCAACTTCTTGATAGAGAATTTCAAGGCTCTAGCCATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CAA 90 bp CATCCGAAGCAGGGACAGATACACATCTTTGTTGCCTTCTTTGTTTaGGTCGTAGTGTTTGTGGCAGTACTCCTTAGCCATCTTTGTGTC +
Preference number: 6 (lower is better)
Translates to: HPKQGQIHIFVAFFV*VVVFVAVLLSHLCV
Trigger: GACACAAAGATGGCTAAGGAGTACTGCCACAAACACTACGACCAAAACAAAGAAGGCAACAAAGATGTGTATCTGTCCCTGCTTCGGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS TCA 72 bp TGGCAGAAGAGGTTGAAGGCATACAAGTTCTTAATGTaGTGGATCTGCTGCTGCTTTTCACTGTCTGAGTCA +
Preference number: 6 (lower is better)
Translates to: WQKRLKAYKFLM*WICCCFSLSES
Trigger: TGACTCAGACAGTGAAAAGCAGCAGCAGATCCATCACATTAAGAACTTGTATGCCTTCAACCTCTTCTGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS CCA 72 bp TTAGCAAAGACCTGCATGGACTCATCAAAGCGCTTCTaGCAGAAGAGGTTGAAGGCATACAAGTTCTTAATG +
Preference number: 6 (lower is better)
Translates to: LAKTCMDSSKRF*QKRLKAYKFLM
Trigger: CATTAAGAACTTGTATGCCTTCAACCTCTTCTGCCAGAAGCGCTTTGATGAGTCCATGCAGGTCTTTGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10
CDS TCA 72 bp CTGAGGAACTCCGCATGGAGAAGATTCTTAAGCACTTaGTTGAACCGTTTCTTTTGTGCATTTTCTTCTAAG +
Preference number: 6 (lower is better)
Translates to: LRNSAWRRFLST*LNRFFCAFSSK
Trigger: CTTAGAAGAAAATGCACAAAAGAAACGGTTCAATCAAGTGCTTAAGAATCTTCTCCATGCGGAGTTCCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000028752.8
ENSMUST00000102501.10