Pregenerated sensors for VPS37D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043614Ensembl transcript IDs: ENSMUST00000067935.11, ENSMUST00000076203.3
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGAACAATCCAGTAAGCCTTGGCAGTTGTTCGAGCCCAGTAGTGTaGCAGGGTGCGACAGGCCCCCAAGCAAGACCCCTCTGGAAGAAG | + |
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Preference number: 1 (lower is better) Translates to: ENNPVSLGSCSSPVV*QGATGPQARPLWKK Trigger: CTTCTTCCAGAGGGGTCTTGCTTGGGGGCCTGTCGCACCCTGCCACACTACTGGGCTCGAACAACTGCCAAGGCTTACTGGATTGTTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR-3UTR GCA 90 bp | GCTGCAAGGCCATTGGGGGTGTCCCTGGGCCCGGCTCCTAGGCGGAGGGCCCCCCGGAGTCCAGCACCCTaGCCACCCCACCCCCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: AARPLGVSLGPAPRRRAPRSPAP*PPHPQP Trigger: GGGCTGGGGGTGGGGTGGGCAGGGTGCTGGACTCCG...GGGGGCCCTCCGCCTAGGAGCCGGGCCCAGGGACACCCCCAATGGCCTTGCAGC 76% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR-3UTR GCA 90 bp | CTACCTTGCCCCAGGGCCAGCTGCAAGGCCATTGGGGGTGTCCCTGGGCCCGGCCCAGGGCCCTGGGCCTaGCTGAGGCTAGGGGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: LPCPRASCKAIGGVPGPGPGPWA*LRLGGG Trigger: CCCTCCCCCTAGCCTCAGGCAGGCCCAGGGCCCTGG...GCCGGGCCCAGGGACACCCCCAATGGCCTTGCAGCTGGCCCTGGGGCAAGGTAG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR-3UTR CCA 90 bp | GCTGCAAGGCCATTGGGGGTGTCCCTGGGCCCGGCTCCTAGGCGGAGGGCCCCCTGTCTGGACCCCCGCTaGGAGGCCTCACCCTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: AARPLGVSLGPAPRRRAPCLDPR*EASPWL Trigger: GAGCCAGGGTGAGGCCTCCCAGCGGGGGTCCAGACA...GGGGGCCCTCCGCCTAGGAGCCGGGCCCAGGGACACCCCCAATGGCCTTGCAGC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR-3UTR GCA 90 bp | GCTGCAAGGCCATTGGGGGTGTCCCTGGGCCCGGCTCCTAGGCGGAGGGCCCCCAGTAGTGTGGCAGGGTaGGACAGGCCCCCAAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: AARPLGVSLGPAPRRRAPSSVAG*DRPPSK Trigger: CTTGCTTGGGGGCCTGTCGCACCCTGCCACACTACT...GGGGGCCCTCCGCCTAGGAGCCGGGCCCAGGGACACCCCCAATGGCCTTGCAGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR-3UTR CCA 90 bp | AGCCTTGGCAGTTGTTCGAGCCCAGTAGTGTGGCAGGGTGCGACAGGCCCCCAACCTGGCTTGGCACCCTaGAGGCCCCAGCCGGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SLGSCSSPVVWQGATGPQPGLAP*RPQPGR Trigger: TCTCCCCGGCTGGGGCCTCCAGGGTGCCAAGCCAGG...TTGGGGGCCTGTCGCACCCTGCCACACTACTGGGCTCGAACAACTGCCAAGGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCTACCTTGCCCCAGGGCCAGCTGCAAGGCCATTGGGGGTGTCCCTGGGCTTTGAGGACCTGGCTTaGCACCCTGGAGGCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: LSYLAPGPAARPLGVSLGFEDLA*HPGGPS Trigger: GCTGGGGCCTCCAGGGTGCCAAGCCAGGTCCTCAAA...GCCCAGGGACACCCCCAATGGCCTTGCAGCTGGCCCTGGGGCAAGGTAGGACAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR-3UTR GCA 90 bp | AAAGTTCTTTTTCATTTGAGGACCTGGCTTGGCACCCTGGAGGCCCCAGCCGGGCGGAGTCCAGCACCCTaGCCACCCCACCCCCAGCCC | + |
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Preference number: 2 (lower is better) Translates to: KVLFHLRTWLGTLEAPAGRSPAP*PPHPQP Trigger: GGGCTGGGGGTGGGGTGGGCAGGGTGCTGGACTCCG...CCCGGCTGGGGCCTCCAGGGTGCCAAGCCAGGTCCTCAAATGAAAAAGAACTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGGCTCTCACCTGTGCAGGTCAGAAGCCTCTGTCCTACCTTGCCCCAGGGTCGAGCCCAGTAGTGTaGCAGGGTGCGACAGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: WQALTCAGQKPLSYLAPGSSPVV*QGATGP Trigger: GGGGCCTGTCGCACCCTGCCACACTACTGGGCTCGA...CCCTGGGGCAAGGTAGGACAGAGGCTTCTGACCTGCACAGGTGAGAGCCTGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR-3UTR CCA 90 bp | TGGCAGGCTCTCACCTGTGCAGGTCAGAAGCCTCTGTCCTACCTTGCCCCAGGGTTTGAGGACCTGGCTTaGCACCCTGGAGGCCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: WQALTCAGQKPLSYLAPGFEDLA*HPGGPS Trigger: GCTGGGGCCTCCAGGGTGCCAAGCCAGGTCCTCAAA...CCCTGGGGCAAGGTAGGACAGAGGCTTCTGACCTGCACAGGTGAGAGCCTGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR-3UTR TCA 90 bp | TGTCCTACCTTGCCCCAGGGCCAGCTGCAAGGCCATTGGGGGTGTCCCTGGGCCAAGTTCTTTTTCATTTaGGGACCTGGCTTGGCACCC | + |
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Preference number: 2 (lower is better) Translates to: CPTLPQGQLQGHWGCPWAKFFFI*GPGLAP Trigger: GGGTGCCAAGCCAGGTCCTCAAATGAAAAAGAACTT...GGCCCAGGGACACCCCCAATGGCCTTGCAGCTGGCCCTGGGGCAAGGTAGGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR-3UTR GCA 90 bp | AAGGACCTGCCCTCAAAAAGGTTCCATTCTAAGGAGACAGGGACAGAAAAATACCCAGGGCCCTGGGCCTaGCTGAGGCTAGGGGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: KDLPSKRFHSKETGTEKYPGPWA*LRLGGG Trigger: CCCTCCCCCTAGCCTCAGGCAGGCCCAGGGCCCTGG...GTATTTTTCTGTCCCTGTCTCCTTAGAATGGAACCTTTTTGAGGGCAGGTCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCTCAAAAAGGTTCCATTCTAAGGAGACAGGGACAGAAAAATACAGAATGTGTCTGGACCCCCGCTaGGAGGCCTCACCCTGGCTC | + |
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Preference number: 2 (lower is better) Translates to: LPSKRFHSKETGTEKYRMCLDPR*EASPWL Trigger: GAGCCAGGGTGAGGCCTCCCAGCGGGGGTCCAGACA...CATTCTGTATTTTTCTGTCCCTGTCTCCTTAGAATGGAACCTTTTTGAGGGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR-3UTR CCA 90 bp | ACCTGCCCTCAAAAAGGTTCCATTCTAAGGAGACAGGGACAGAAAAATACAGAACAGCTGCAAGGCCATTaGGGGTGTCCCTGGGCCCGG | + |
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Preference number: 2 (lower is better) Translates to: TCPQKGSILRRQGQKNTEQLQGH*GCPWAR Trigger: CCGGGCCCAGGGACACCCCCAATGGCCTTGCAGCTG...TTCTGTATTTTTCTGTCCCTGTCTCCTTAGAATGGAACCTTTTTGAGGGCAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR-3UTR GCA 90 bp | AGGACCTGCCCTCAAAAAGGTTCCATTCTAAGGAGACAGGGACAGAAAAATACAGCCTCTGTCCTACCTTaGCCCAGGGCCAGCTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: RTCPQKGSILRRQGQKNTASVLP*PRASCK Trigger: CTTGCAGCTGGCCCTGGGGCAAGGTAGGACAGAGGC...TGTATTTTTCTGTCCCTGTCTCCTTAGAATGGAACCTTTTTGAGGGCAGGTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR-3UTR GCA 90 bp | ACCTGCCCTCAAAAAGGTTCCATTCTAAGGAGACAGGGACAGAAAAATACAGAAGCCTCTGTCCTACCTTaGCCCAGGGCCAGCTGCAAG | + |
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Preference number: 2 (lower is better) Translates to: TCPQKGSILRRQGQKNTEASVLP*PRASCK Trigger: CTTGCAGCTGGCCCTGGGGCAAGGTAGGACAGAGGC...TTCTGTATTTTTCTGTCCCTGTCTCCTTAGAATGGAACCTTTTTGAGGGCAGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR-3UTR CCA 90 bp | AGGACCTGCCCTCAAAAAGGTTCCATTCTAAGGAGACAGGGACAGAAAAATACATTTCATTTGAGGACCTaGCTTGGCACCCTGGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: RTCPQKGSILRRQGQKNTFHLRT*LGTLEA Trigger: GGCCTCCAGGGTGCCAAGCCAGGTCCTCAAATGAAA...TGTATTTTTCTGTCCCTGTCTCCTTAGAATGGAACCTTTTTGAGGGCAGGTCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR CCA 72 bp | TGTCCTACCTTGCCCCAGGGCCAGCTGCAAGGCCATTaGGGGTGTCCCTGGGCCCGGCTCCTAGGCGGAGGG | + |
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Preference number: 3 (lower is better) Translates to: CPTLPQGQLQGH*GCPWARLLGGG Trigger: CCCTCCGCCTAGGAGCCGGGCCCAGGGACACCCCCAATGGCCTTGCAGCTGGCCCTGGGGCAAGGTAGGACA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR CCA 72 bp | CCAGTAAGCCTTGGCAGTTGTTCGAGCCCAGTAGTGTaGCAGGGTGCGACAGGCCCCCAAGCAAGACCCCTC | + |
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Preference number: 3 (lower is better) Translates to: PVSLGSCSSPVV*QGATGPQARPL Trigger: GAGGGGTCTTGCTTGGGGGCCTGTCGCACCCTGCCACACTACTGGGCTCGAACAACTGCCAAGGCTTACTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR CCA 72 bp | TCAGCACATTTATTGACAGCCCCTAGGAGGCGGGGCTaGGGACAGAACATACAAAGACAAGGACCTGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: SAHLLTAPRRRG*GQNIQRQGPAL Trigger: GAGGGCAGGTCCTTGTCTTTGTATGTTCTGTCCCCAGCCCCGCCTCCTAGGGGCTGTCAATAAATGTGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CCA 90 bp | GCTGCAAGGCCATTGGGGGTGTCCCTGGGCCCGGCTCCTAGGCGGAGGGCCCCCGGGTACTGCTGGAGGTaGTCCCCGGGCGGCCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: AARPLGVSLGPAPRRRAPGYCWR*SPGGPS Trigger: ACTGGGGCCGCCCGGGGACCACCTCCAGCAGTACCC...GGGGGCCCTCCGCCTAGGAGCCGGGCCCAGGGACACCCCCAATGGCCTTGCAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CCA 90 bp | CCTACCTTGCCCCAGGGCCAGCTGCAAGGCCATTGGGGGTGTCCCTGGGCCCGGGGGGATCCATGGCGGTaGCGGCGGCGGCAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PTLPQGQLQGHWGCPWARGDPWR*RRRQQQ Trigger: CTGCTGCTGCCGCCGCCGCCACCGCCATGGATCCCC...CCGGGCCCAGGGACACCCCCAATGGCCTTGCAGCTGGCCCTGGGGCAAGGTAGG 73% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CCA 90 bp | CCTACCTTGCCCCAGGGCCAGCTGCAAGGCCATTGGGGGTGTCCCTGGGCCCGGAGGGCACGGCCCCTCTaGAAGGCTGGCAGGAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: PTLPQGQLQGHWGCPWARRARPL*KAGRKA Trigger: GGCCTTCCTGCCAGCCTTCCAGAGGGGCCGTGCCCT...CCGGGCCCAGGGACACCCCCAATGGCCTTGCAGCTGGCCCTGGGGCAAGGTAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CCA 90 bp | CCTACCTTGCCCCAGGGCCAGCTGCAAGGCCATTGGGGGTGTCCCTGGGCCCGGGGGAGAGCCCTTCACTaGGGGCACTGGGCGGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: PTLPQGQLQGHWGCPWARGRALH*GHWAGV Trigger: GACTCCCGCCCAGTGCCCCCAGTGAAGGGCTCTCCC...CCGGGCCCAGGGACACCCCCAATGGCCTTGCAGCTGGCCCTGGGGCAAGGTAGG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| 3UTR CAA 72 bp | CTGTCCTACCTTGCCCCAGGGCCAGCTGCAAGGCCATaGGGGGTGTCCCTGGGCCCGGCTCCTAGGCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: LSYLAPGPAARP*GVSLGPAPRRR Trigger: CCTCCGCCTAGGAGCCGGGCCCAGGGACACCCCCAATGGCCTTGCAGCTGGCCCTGGGGCAAGGTAGGACAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR TCA 90 bp | CTGTCCTACCTTGCCCCAGGGCCAGCTGCAAGGCCATTGGGGGTGTCCCTGGGCGGAGCTGCCCGGTGCTaGGGATCCCAAAGCGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: LSYLAPGPAARPLGVSLGGAARC*GSQSAP Trigger: CGGGGCGCTTTGGGATCCTCAGCACCGGGCAGCTCC...GCCCAGGGACACCCCCAATGGCCTTGCAGCTGGCCCTGGGGCAAGGTAGGACAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR TCA 90 bp | TGTCCTACCTTGCCCCAGGGCCAGCTGCAAGGCCATTGGGGGTGTCCCTGGGCCGGAGCTGCCCGGTGCTaGGGATCCCAAAGCGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: CPTLPQGQLQGHWGCPWAGAARC*GSQSAP Trigger: CGGGGCGCTTTGGGATCCTCAGCACCGGGCAGCTCC...GGCCCAGGGACACCCCCAATGGCCTTGCAGCTGGCCCTGGGGCAAGGTAGGACA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR GCA 90 bp | GCTGCAAGGCCATTGGGGGTGTCCCTGGGCCCGGCTCCTAGGCGGAGGGCCCCCTCTTCCAGCTCAGCCTaGAGCCAGCCCAGCGCACAT | + |
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Preference number: 4 (lower is better) Translates to: AARPLGVSLGPAPRRRAPSSSSA*SQPSAH Trigger: ATGTGCGCTGGGCTGGCTGCAGGCTGAGCTGGAAGA...GGGGGCCCTCCGCCTAGGAGCCGGGCCCAGGGACACCCCCAATGGCCTTGCAGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS-3UTR CCA 90 bp | CTGTCCTACCTTGCCCCAGGGCCAGCTGCAAGGCCATTGGGGGTGTCCCTGGGCGTTGTGGGGGCCGGCTaGGCAGAGCGCTCTCGACGC | + |
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Preference number: 4 (lower is better) Translates to: LSYLAPGPAARPLGVSLGVVGAG*AERSRR Trigger: GCGTCGAGAGCGCTCTGCCCAGCCGGCCCCCACAAC...GCCCAGGGACACCCCCAATGGCCTTGCAGCTGGCCCTGGGGCAAGGTAGGACAG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CCA 90 bp | CCTACCTTGCCCCAGGGCCAGCTGCAAGGCCATTGGGGGTGTCCCTGGGCCCGGGCTCAGCAAAGGGGCTaGGCCAAAAGGGCACCCGGG | + |
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Preference number: 4 (lower is better) Translates to: PTLPQGQLQGHWGCPWARAQQRG*AKRAPG Trigger: CCCGGGTGCCCTTTTGGCCCAGCCCCTTTGCTGAGC...CCGGGCCCAGGGACACCCCCAATGGCCTTGCAGCTGGCCCTGGGGCAAGGTAGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR TCA 90 bp | GCTGCAAGGCCATTGGGGGTGTCCCTGGGCCCGGCTCCTAGGCGGAGGGCCCCCAGCTTGGGCTCATCTTaGAGCAGATCCCGGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AARPLGVSLGPAPRRRAPSLGSS*SRSRSC Trigger: GCAGCTCCGGGATCTGCTTCAAGATGAGCCCAAGCT...GGGGGCCCTCCGCCTAGGAGCCGGGCCCAGGGACACCCCCAATGGCCTTGCAGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CCA 90 bp | GGCAGGCTCTCACCTGTGCAGGTCAGAAGCCTCTGTCCTACCTTGCCCCAGGGCGGGTACTGCTGGAGGTaGTCCCCGGGCGGCCCCAGT | + |
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Preference number: 4 (lower is better) Translates to: GRLSPVQVRSLCPTLPQGGYCWR*SPGGPS Trigger: ACTGGGGCCGCCCGGGGACCACCTCCAGCAGTACCC...GCCCTGGGGCAAGGTAGGACAGAGGCTTCTGACCTGCACAGGTGAGAGCCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CCA 90 bp | CCAGTAAGCCTTGGCAGTTGTTCGAGCCCAGTAGTGTGGCAGGGTGCGACAGGCGGGGATCCATGGCGGTaGCGGCGGCGGCAGCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PVSLGSCSSPVVWQGATGGDPWR*RRRQQQ Trigger: CTGCTGCTGCCGCCGCCGCCACCGCCATGGATCCCC...GCCTGTCGCACCCTGCCACACTACTGGGCTCGAACAACTGCCAAGGCTTACTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CCA 90 bp | AGCCTTGGCAGTTGTTCGAGCCCAGTAGTGTGGCAGGGTGCGACAGGCCCCCAAGGGAGAGCCCTTCACTaGGGGCACTGGGCGGGAGTC | + |
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Preference number: 4 (lower is better) Translates to: SLGSCSSPVVWQGATGPQGRALH*GHWAGV Trigger: GACTCCCGCCCAGTGCCCCCAGTGAAGGGCTCTCCC...TTGGGGGCCTGTCGCACCCTGCCACACTACTGGGCTCGAACAACTGCCAAGGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CCA 90 bp | AGCCTTGGCAGTTGTTCGAGCCCAGTAGTGTGGCAGGGTGCGACAGGCCCCCAAGCTCAGCAAAGGGGCTaGGCCAAAAGGGCACCCGGG | + |
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Preference number: 4 (lower is better) Translates to: SLGSCSSPVVWQGATGPQAQQRG*AKRAPG Trigger: CCCGGGTGCCCTTTTGGCCCAGCCCCTTTGCTGAGC...TTGGGGGCCTGTCGCACCCTGCCACACTACTGGGCTCGAACAACTGCCAAGGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR GCA 90 bp | CCAGGCAGTGGGGGAGGAGGAGGAGCCATGAATCAAGTTTGTCTGGACCCCCGCAGCAGATCCCGGAGCTaGCCGGTGCTGAGGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: PGSGGGGGAMNQVCLDPRSRSRS*PVLRIP Trigger: TGGGATCCTCAGCACCGGGCAGCTCCGGGATCTGCT...GCGGGGGTCCAGACAAACTTGATTCATGGCTCCTCCTCCTCCCCCACTGCCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR GCA 90 bp | TGGGGGAGGAGGAGGAGCCATGAATCAAGTTTGTCTGGACCCCCGCTGGGAGGCAGCAGATCCCGGAGCTaGCCGGTGCTGAGGATCCCA | + |
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Preference number: 4 (lower is better) Translates to: WGRRRSHESSLSGPPLGGSRSRS*PVLRIP Trigger: TGGGATCCTCAGCACCGGGCAGCTCCGGGATCTGCT...GCCTCCCAGCGGGGGTCCAGACAAACTTGATTCATGGCTCCTCCTCCTCCCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CCA 90 bp | AAAGTTCTTTTTCATTTGAGGACCTGGCTTGGCACCCTGGAGGCCCCAGCCGGGGTTGTGGGGGCCGGCTaGGCAGAGCGCTCTCGACGC | + |
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Preference number: 4 (lower is better) Translates to: KVLFHLRTWLGTLEAPAGVVGAG*AERSRR Trigger: GCGTCGAGAGCGCTCTGCCCAGCCGGCCCCCACAAC...CCCGGCTGGGGCCTCCAGGGTGCCAAGCCAGGTCCTCAAATGAAAAAGAACTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CCA 90 bp | TGGCAGGCTCTCACCTGTGCAGGTCAGAAGCCTCTGTCCTACCTTGCCCCAGGGCAGCAGGGAAGGGTTTaGGGGGATCCATGGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: WQALTCAGQKPLSYLAPGQQGRV*GDPWRW Trigger: CCACCGCCATGGATCCCCCCAAACCCTTCCCTGCTG...CCCTGGGGCAAGGTAGGACAGAGGCTTCTGACCTGCACAGGTGAGAGCCTGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR TCA 90 bp | CCAGTAAGCCTTGGCAGTTGTTCGAGCCCAGTAGTGTGGCAGGGTGCGACAGGCCCTGGAACTTCCTGCTaGGCCGCACGATCCGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PVSLGSCSSPVVWQGATGPGTSC*AARSGP Trigger: TGGACCGGATCGTGCGGCTCAGCAGGAAGTTCCAGG...GCCTGTCGCACCCTGCCACACTACTGGGCTCGAACAACTGCCAAGGCTTACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS-3UTR GCA 90 bp | CCAGTAAGCCTTGGCAGTTGTTCGAGCCCAGTAGTGTGGCAGGGTGCGACAGGCTCCCCCAGCAGCAGCTaGTCCATCTGGACCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: PVSLGSCSSPVVWQGATGSPSSS*SIWTSA Trigger: GGCTGAGGTCCAGATGGAGCAGCTGCTGCTGGGGGA...GCCTGTCGCACCCTGCCACACTACTGGGCTCGAACAACTGCCAAGGCTTACTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS-3UTR CCA 90 bp | CCAGGCAGTGGGGGAGGAGGAGGAGCCATGAATCAAGTTTGTCTGGACCCCCGCTCCAGCTGCAGACCCTaGAACTTCCTGCTGAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: PGSGGGGGAMNQVCLDPRSSCRP*NFLLSR Trigger: GCGGCTCAGCAGGAAGTTCCAGGGTCTGCAGCTGGA...GCGGGGGTCCAGACAAACTTGATTCATGGCTCCTCCTCCTCCCCCACTGCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS-3UTR TCA 90 bp | TGGGGGAGGAGGAGGAGCCATGAATCAAGTTTGTCTGGACCCCCGCTGGGAGGCAGCTTGGGCTCATCTTaGAGCAGATCCCGGAGCTGC | + |
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Preference number: 4 (lower is better) Translates to: WGRRRSHESSLSGPPLGGSLGSS*SRSRSC Trigger: GCAGCTCCGGGATCTGCTTCAAGATGAGCCCAAGCT...GCCTCCCAGCGGGGGTCCAGACAAACTTGATTCATGGCTCCTCCTCCTCCCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR GCA 90 bp | CCAGGCAGTGGGGGAGGAGGAGGAGCCATGAATCAAGTTTGTCTGGACCCCCGCTGGACCTCAGCCTCCTaGTCAGCCTCTTCCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: PGSGGGGGAMNQVCLDPRWTSAS*SASSSS Trigger: TGAGCTGGAAGAGGCTGAGCAGGAGGCTGAGGTCCA...GCGGGGGTCCAGACAAACTTGATTCATGGCTCCTCCTCCTCCCCCACTGCCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS-3UTR GCA 90 bp | CCAGGCAGTGGGGGAGGAGGAGGAGCCATGAATCAAGTTTGTCTGGACCCCCGCTCTCTGCAGTTTGTCTaGGCAGTTCTCAGCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PGSGGGGGAMNQVCLDPRSLQFV*AVLSHL Trigger: GAGGTGGCTGAGAACTGCGCAGACAAACTGCAGAGA...GCGGGGGTCCAGACAAACTTGATTCATGGCTCCTCCTCCTCCCCCACTGCCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS-3UTR CCA 90 bp | TGGCAGGCTCTCACCTGTGCAGGTCAGAAGCCTCTGTCCTACCTTGCCCCAGGGCGATCCGGTCCAGCTTaGGCTCATCTTGAAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: WQALTCAGQKPLSYLAPGRSGPA*AHLEAD Trigger: ATCTGCTTCAAGATGAGCCCAAGCTGGACCGGATCG...CCCTGGGGCAAGGTAGGACAGAGGCTTCTGACCTGCACAGGTGAGAGCCTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR GCA 90 bp | CCAGGCAGTGGGGGAGGAGGAGGAGCCATGAATCAAGTTTGTCTGGACCCCCGCCTCTTCTCCAGTCTCTaGAGTTTGTCTGCGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGSGGGGGAMNQVCLDPRLFSSL*SLSAQF Trigger: GAACTGCGCAGACAAACTGCAGAGACTGGAGAAGAG...GCGGGGGTCCAGACAAACTTGATTCATGGCTCCTCCTCCTCCCCCACTGCCTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS-3UTR CCA 90 bp | CCAGTAAGCCTTGGCAGTTGTTCGAGCCCAGTAGTGTGGCAGGGTGCGACAGGCACCTCTCGAAGCTCTTaGTACTTGATGGCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PVSLGSCSSPVVWQGATGTSRSS*YLMARA Trigger: AGCCCTGGCCATCAAGTACCAAGAGCTTCGAGAGGT...GCCTGTCGCACCCTGCCACACTACTGGGCTCGAACAACTGCCAAGGCTTACTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS-3UTR CCA 90 bp | AAGGACCTGCCCTCAAAAAGGTTCCATTCTAAGGAGACAGGGACAGAAAAATACGCTCCGGGGTACTGCTaGAGGTGGTCCCCGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: KDLPSKRFHSKETGTEKYAPGYC*RWSPGG Trigger: GCCGCCCGGGGACCACCTCCAGCAGTACCCCGGAGC...GTATTTTTCTGTCCCTGTCTCCTTAGAATGGAACCTTTTTGAGGGCAGGTCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CCA 90 bp | AAAGTTCTTTTTCATTTGAGGACCTGGCTTGGCACCCTGGAGGCCCCAGCCGGGCGATCCGGTCCAGCTTaGGCTCATCTTGAAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KVLFHLRTWLGTLEAPAGRSGPA*AHLEAD Trigger: ATCTGCTTCAAGATGAGCCCAAGCTGGACCGGATCG...CCCGGCTGGGGCCTCCAGGGTGCCAAGCCAGGTCCTCAAATGAAAAAGAACTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CCA 90 bp | CTGCCCTCAAAAAGGTTCCATTCTAAGGAGACAGGGACAGAAAAATACAGAATGGCTCCGGGGTACTGCTaGAGGTGGTCCCCGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPSKRFHSKETGTEKYRMAPGYC*RWSPGG Trigger: GCCGCCCGGGGACCACCTCCAGCAGTACCCCGGAGC...CATTCTGTATTTTTCTGTCCCTGTCTCCTTAGAATGGAACCTTTTTGAGGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CCA 90 bp | ACCTGCCCTCAAAAAGGTTCCATTCTAAGGAGACAGGGACAGAAAAATACAGAAAGGGCACGGCCCCTCTaGAAGGCTGGCAGGAAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TCPQKGSILRRQGQKNTERARPL*KAGRKA Trigger: GGCCTTCCTGCCAGCCTTCCAGAGGGGCCGTGCCCT...TTCTGTATTTTTCTGTCCCTGTCTCCTTAGAATGGAACCTTTTTGAGGGCAGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR TCA 90 bp | AGGACCTGCCCTCAAAAAGGTTCCATTCTAAGGAGACAGGGACAGAAAAATACATCTGGACCTTCCTGCTaGGCCGCACGATCCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RTCPQKGSILRRQGQKNTSGPSC*AARSGP Trigger: TGGACCGGATCGTGCGGCTCAGCAGGAAGGTCCAGA...TGTATTTTTCTGTCCCTGTCTCCTTAGAATGGAACCTTTTTGAGGGCAGGTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000076203.3 |
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| CDS-3UTR CCA 90 bp | AGGACCTGCCCTCAAAAAGGTTCCATTCTAAGGAGACAGGGACAGAAAAATACACAGCAGGGAAGGGTTTaGGGGGATCCATGGCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTCPQKGSILRRQGQKNTQQGRV*GDPWRW Trigger: CCACCGCCATGGATCCCCCCAAACCCTTCCCTGCTG...TGTATTTTTCTGTCCCTGTCTCCTTAGAATGGAACCTTTTTGAGGGCAGGTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CCA 90 bp | CTGCCCTCAAAAAGGTTCCATTCTAAGGAGACAGGGACAGAAAAATACAGAATGCAGCCCAGCGCACATTaGGGGCTCCAGCGATGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LPSKRFHSKETGTEKYRMQPSAH*GLQRCM Trigger: CATGCATCGCTGGAGCCCCCAATGTGCGCTGGGCTG...CATTCTGTATTTTTCTGTCCCTGTCTCCTTAGAATGGAACCTTTTTGAGGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS TCA 90 bp | CCAGCTTGGGCTCATCTTGAAGCAGATCCCGGAGCTGCCCGGTGCTaGGGATCCCAAAGCGCCCCGGGCTGCCGGGCTCCGGCCCCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PAWAHLEADPGAARC*GSQSAPGCRAPAPP Trigger: GGGCGGGGCCGGAGCCCGGCAGCCCGGGGCGCTTTGGGATCCTCAGCACCGGGCAGCTCCGGGATCTGCTTCAAGATGAGCCCAAGCTGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS CCA 90 bp | TTCTCGGCCTGTGTCCGCCTCAGGTGGGCCAGGGCACGGCCCCTCTaGAAGGCTGGCAGGAAGGCCTCCAGGCTCTGTTCCCCCAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FSACVRLRWARARPL*KAGRKASRLCSPSS Trigger: GCTGCTGGGGGAACAGAGCCTGGAGGCCTTCCTGCCAGCCTTCCAGAGGGGCCGTGCCCTGGCCCACCTGAGGCGGACACAGGCCGAGAA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CAA 90 bp | GCTGCAAGGCCATTGGGGGTGTCCCTGGGCCCGGCTCCTAGGCGGAGGGCCCCCCGAAGCTCTTGGTACTaGATGGCCAGGGCTGTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: AARPLGVSLGPAPRRRAPRSSWY*MARAVR Trigger: TCGGACAGCCCTGGCCATCAAGTACCAAGAGCTTCG...GGGGGCCCTCCGCCTAGGAGCCGGGCCCAGGGACACCCCCAATGGCCTTGCAGC 69% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS-3UTR CAA 90 bp | GGCAGGCTCTCACCTGTGCAGGTCAGAAGCCTCTGTCCTACCTTGCCCCAGGGCCAGCAGCAGCAGCAGTaGTGGGGGCCGGCTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GRLSPVQVRSLCPTLPQGQQQQQ*WGPAGQ Trigger: CTGCCCAGCCGGCCCCCACAACTGCTGCTGCTGCTG...GCCCTGGGGCAAGGTAGGACAGAGGCTTCTGACCTGCACAGGTGAGAGCCTGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CAA 90 bp | CTACCTTGCCCCAGGGCCAGCTGCAAGGCCATTGGGGGTGTCCCTGGGCCCGGCCACCTCTCGAAGCTCTaGGTACTTGATGGCCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LPCPRASCKAIGGVPGPGHLSKL*VLDGQG Trigger: GCCCTGGCCATCAAGTACCAAGAGCTTCGAGAGGTG...GCCGGGCCCAGGGACACCCCCAATGGCCTTGCAGCTGGCCCTGGGGCAAGGTAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS TCA 90 bp | ACCTTCCTGCTGAGCCGCACGATCCGGTCCAGCTTGGGCTCATCTTaGAGCAGATCCCGGAGCTGCCCGGTGCTGAGGATCCCAAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TFLLSRTIRSSLGSS*SRSRSCPVLRIPKR Trigger: GCGCTTTGGGATCCTCAGCACCGGGCAGCTCCGGGATCTGCTTCAAGATGAGCCCAAGCTGGACCGGATCGTGCGGCTCAGCAGGAAGGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076203.3 |
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| CDS TCA 90 bp | AACTTCCTGCTGAGCCGCACGATCCGGTCCAGCTTGGGCTCATCTTaGAGCAGATCCCGGAGCTGCCCGGTGCTGAGGATCCCAAAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: NFLLSRTIRSSLGSS*SRSRSCPVLRIPKR Trigger: GCGCTTTGGGATCCTCAGCACCGGGCAGCTCCGGGATCTGCTTCAAGATGAGCCCAAGCTGGACCGGATCGTGCGGCTCAGCAGGAAGTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS TCA 90 bp | GTTTGTCTGCGCAGTTCTCAGCCACCTCTCGAAGCTCTTGGTACTTaGTGGCCAGGGCTGTCCGACCCATCTCCAGGCGGGGCCGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VCLRSSQPPLEALGT*WPGLSDPSPGGAAR Trigger: CCTTGCGGCCCCGCCTGGAGATGGGTCGGACAGCCCTGGCCATCAAGTACCAAGAGCTTCGAGAGGTGGCTGAGAACTGCGCAGACAAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS-3UTR CAA 90 bp | AGCCTTGGCAGTTGTTCGAGCCCAGTAGTGTGGCAGGGTGCGACAGGCCCCCAACAGCTTGGGCTCATCTaGAAGCAGATCCCGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLGSCSSPVVWQGATGPQQLGLI*KQIPEL Trigger: CAGCTCCGGGATCTGCTTCAAGATGAGCCCAAGCTG...TTGGGGGCCTGTCGCACCCTGCCACACTACTGGGCTCGAACAACTGCCAAGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CAA 90 bp | CCAGTAAGCCTTGGCAGTTGTTCGAGCCCAGTAGTGTGGCAGGGTGCGACAGGCTCCAGTCTCTGCAGTTaGTCTGCGCAGTTCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: PVSLGSCSSPVVWQGATGSSLCS*SAQFSA Trigger: GGCTGAGAACTGCGCAGACAAACTGCAGAGACTGGA...GCCTGTCGCACCCTGCCACACTACTGGGCTCGAACAACTGCCAAGGCTTACTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS GCA 90 bp | GGGGCTCCAGCGATGCATGCTCTTCTCCAGTCTCTGCAGTTTGTCTaGGCAGTTCTCAGCCACCTCTCGAAGCTCTTGGTACTTGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: GAPAMHALLQSLQFV*AVLSHLSKLLVLDG Trigger: GCCATCAAGTACCAAGAGCTTCGAGAGGTGGCTGAGAACTGCGCAGACAAACTGCAGAGACTGGAGAAGAGCATGCATCGCTGGAGCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS-3UTR CAA 90 bp | ACCTGCCCTCAAAAAGGTTCCATTCTAAGGAGACAGGGACAGAAAAATACAGAACAGCAGCAGCAGCAGTaGTGGGGGCCGGCTGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: TCPQKGSILRRQGQKNTEQQQQQ*WGPAGQ Trigger: CTGCCCAGCCGGCCCCCACAACTGCTGCTGCTGCTG...TTCTGTATTTTTCTGTCCCTGTCTCCTTAGAATGGAACCTTTTTGAGGGCAGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS-3UTR CAA 90 bp | AAGGACCTGCCCTCAAAAAGGTTCCATTCTAAGGAGACAGGGACAGAAAAATACCCAGCCCAGCGCACATaGGGGGCTCCAGCGATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KDLPSKRFHSKETGTEKYPAQRT*GAPAMH Trigger: ATGCATCGCTGGAGCCCCCAATGTGCGCTGGGCTGG...GTATTTTTCTGTCCCTGTCTCCTTAGAATGGAACCTTTTTGAGGGCAGGTCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS-3UTR CAA 90 bp | AAGGACCTGCCCTCAAAAAGGTTCCATTCTAAGGAGACAGGGACAGAAAAATACCAGCTTGGGCTCATCTaGAAGCAGATCCCGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KDLPSKRFHSKETGTEKYQLGLI*KQIPEL Trigger: CAGCTCCGGGATCTGCTTCAAGATGAGCCCAAGCTG...GTATTTTTCTGTCCCTGTCTCCTTAGAATGGAACCTTTTTGAGGGCAGGTCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS TCA 72 bp | GCTCATCTTGAAGCAGATCCCGGAGCTGCCCGGTGCTaGGGATCCCAAAGCGCCCCGGGCTGCCGGGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: AHLEADPGAARC*GSQSAPGCRAP Trigger: CGGAGCCCGGCAGCCCGGGGCGCTTTGGGATCCTCAGCACCGGGCAGCTCCGGGATCTGCTTCAAGATGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS CCA 72 bp | TGTGTCCGCCTCAGGTGGGCCAGGGCACGGCCCCTCTaGAAGGCTGGCAGGAAGGCCTCCAGGCTCTGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: CVRLRWARARPL*KAGRKASRLCS Trigger: GGAACAGAGCCTGGAGGCCTTCCTGCCAGCCTTCCAGAGGGGCCGTGCCCTGGCCCACCTGAGGCGGACACA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS CCA 72 bp | TTCAGGCTGAGAGGGTCGAGGGCTCAGCAAAGGGGCTaGGCCAAAAGGGCACCCGGGAGAGCCCTTCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: FRLRGSRAQQRG*AKRAPGRALHW Trigger: CCAGTGAAGGGCTCTCCCGGGTGCCCTTTTGGCCCAGCCCCTTTGCTGAGCCCTCGACCCTCTCAGCCTGAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS CAA 72 bp | GCTGAGCCGCACGATCCGGTCCAGCTTGGGCTCATCTaGAAGCAGATCCCGGAGCTGCCCGGTGCTGAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: AEPHDPVQLGLI*KQIPELPGAED Trigger: ATCCTCAGCACCGGGCAGCTCCGGGATCTGCTTCAAGATGAGCCCAAGCTGGACCGGATCGTGCGGCTCAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000067935.11 ENSMUST00000076203.3 |
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| CDS CAA 90 bp | GACCTTCCTGCTGAGCCGCACGATCCGGTCCAGCTTGGGCTCATCTaGAAGCAGATCCCGGAGCTGCCCGGTGCTGAGGATCCCAAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: DLPAEPHDPVQLGLI*KQIPELPGAEDPKA Trigger: CGCTTTGGGATCCTCAGCACCGGGCAGCTCCGGGATCTGCTTCAAGATGAGCCCAAGCTGGACCGGATCGTGCGGCTCAGCAGGAAGGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000076203.3 |
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| CDS CAA 90 bp | GAACTTCCTGCTGAGCCGCACGATCCGGTCCAGCTTGGGCTCATCTaGAAGCAGATCCCGGAGCTGCCCGGTGCTGAGGATCCCAAAGCG | + |
|
Preference number: 6 (lower is better) Translates to: ELPAEPHDPVQLGLI*KQIPELPGAEDPKA Trigger: CGCTTTGGGATCCTCAGCACCGGGCAGCTCCGGGATCTGCTTCAAGATGAGCCCAAGCTGGACCGGATCGTGCGGCTCAGCAGGAAGTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS CCA 72 bp | TCTTCCAGCTCAGCCTGCAGCCAGCCCAGCGCACATTaGGGGCTCCAGCGATGCATGCTCTTCTCCAGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSACSQPSAH*GLQRCMLFSSL Trigger: GAGACTGGAGAAGAGCATGCATCGCTGGAGCCCCCAATGTGCGCTGGGCTGGCTGCAGGCTGAGCTGGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS CAA 72 bp | CTCTTCCAGCTCAGCCTGCAGCCAGCCCAGCGCACATaGGGGGCTCCAGCGATGCATGCTCTTCTCCAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LFQLSLQPAQRT*GAPAMHALLQS Trigger: AGACTGGAGAAGAGCATGCATCGCTGGAGCCCCCAATGTGCGCTGGGCTGGCTGCAGGCTGAGCTGGAAGAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS CAA 90 bp | AGTTTGTCTGCGCAGTTCTCAGCCACCTCTCGAAGCTCTTGGTACTaGATGGCCAGGGCTGTCCGACCCATCTCCAGGCGGGGCCGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SLSAQFSATSRSSWY*MARAVRPISRRGRK Trigger: CTTGCGGCCCCGCCTGGAGATGGGTCGGACAGCCCTGGCCATCAAGTACCAAGAGCTTCGAGAGGTGGCTGAGAACTGCGCAGACAAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS GCA 72 bp | GCCAGCCCAGCGCACATTGGGGGCTCCAGCGATGCATaGTCTTCTCCAGTCTCTGCAGTTTGTCTGCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: ASPAHIGGSSDA*SSPVSAVCLRS Trigger: ACTGCGCAGACAAACTGCAGAGACTGGAGAAGAGCATGCATCGCTGGAGCCCCCAATGTGCGCTGGGCTGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS GCA 72 bp | TGGGGGCTCCAGCGATGCATGCTCTTCTCCAGTCTCTaGAGTTTGTCTGCGCAGTTCTCAGCCACCTCTCGA | + |
|
Preference number: 6 (lower is better) Translates to: WGLQRCMLFSSL*SLSAQFSATSR Trigger: TCGAGAGGTGGCTGAGAACTGCGCAGACAAACTGCAGAGACTGGAGAAGAGCATGCATCGCTGGAGCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS CAA 72 bp | TTTGTCTGCGCAGTTCTCAGCCACCTCTCGAAGCTCTaGGTACTTGATGGCCAGGGCTGTCCGACCCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: FVCAVLSHLSKL*VLDGQGCPTHL Trigger: GAGATGGGTCGGACAGCCCTGGCCATCAAGTACCAAGAGCTTCGAGAGGTGGCTGAGAACTGCGCAGACAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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| CDS GCA 72 bp | GCGATGCATGCTCTTCTCCAGTCTCTGCAGTTTGTCTaGGCAGTTCTCAGCCACCTCTCGAAGCTCTTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: AMHALLQSLQFV*AVLSHLSKLLV Trigger: TACCAAGAGCTTCGAGAGGTGGCTGAGAACTGCGCAGACAAACTGCAGAGACTGGAGAAGAGCATGCATCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000067935.11 |
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