Pregenerated sensors for VPS37C (Mus musculus)
Ensembl gene IDs: ENSMUSG00000048832Ensembl transcript IDs: ENSMUST00000087951.7, ENSMUST00000235921.2, ENSMUST00000235927.2, ENSMUST00000237240.2, ENSMUST00000237437.2
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCCCACCATAGGAGGAAGGCTGGGCCACCACAGGGAAGGGGGCTaGCTGCAGGGCTCCCTGGGCTGTCGGGCCCACAGGCAAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: RPTIGGRLGHHREGG*LQGSLGCRAHRQAW Trigger: CCAGGCTTGCCTGTGGGCCCGACAGCCCAGGGAGCCCTGCAGCCAGCCCCCTTCCCTGTGGTGGCCCAGCCTTCCTCCTATGGTGGGCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR CCA 90 bp | GGCTGGCTGCAGGGCTCCCTGGGCTGTCGGGCCCACAGGCAAGCCTaGGGATGGGCTGTAGGGCAAAGGGTAGGGAGTCACTACAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: GWLQGSLGCRAHRQA*GWAVGQRVGSHYRG Trigger: CCCTCTGTAGTGACTCCCTACCCTTTGCCCTACAGCCCATCCCCAGGCTTGCCTGTGGGCCCGACAGCCCAGGGAGCCCTGCAGCCAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR CCA 90 bp | CTGCAGGGCTCCCTGGGCTGTCGGGCCCACAGGCAAGCCTGGGGATaGGCTGTAGGGCAAAGGGTAGGGAGTCACTACAGAGGGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: LQGSLGCRAHRQAWG*AVGQRVGSHYRGLW Trigger: CCACAGCCCTCTGTAGTGACTCCCTACCCTTTGCCCTACAGCCCATCCCCAGGCTTGCCTGTGGGCCCGACAGCCCAGGGAGCCCTGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR CCA 90 bp | GCTGGGGCGGGCCACTCCTCTGTGGAGACCAAGAGTAACCCACCATaGCCCTGGGTCCTGGATGAGGTGATGGGTAAGGACCCAGAGGCC | + |
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Preference number: 1 (lower is better) Translates to: AGAGHSSVETKSNPP*PWVLDEVMGKDPEA Trigger: GGCCTCTGGGTCCTTACCCATCACCTCATCCAGGACCCAGGGCCATGGTGGGTTACTCTTGGTCTCCACAGAGGAGTGGCCCGCCCCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR TCA 90 bp | GACACCAGAGAGCCCTGGGCTCCCAGCAGGCCACTCAGGATGTGCTaGGCAGTCCCTGGCAGAAGGAGCTCCCAGAAGGACTCATGCTGC | + |
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Preference number: 1 (lower is better) Translates to: DTREPWAPSRPLRMC*AVPGRRSSQKDSCC Trigger: GCAGCATGAGTCCTTCTGGGAGCTCCTTCTGCCAGGGACTGCTCAGCACATCCTGAGTGGCCTGCTGGGAGCCCAGGGCTCTCTGGTGTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR CCA 90 bp | GAAAGAGCCAGCCAGAAGTGGAGGGCCCTAGGAGTGAAAAGTGGCTaGGAGGTAACCCTGGTCCTCCACTCCAGCCCGGGGCTCCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: ERASQKWRALGVKSG*EVTLVLHSSPGLQG Trigger: ACCCTGGAGCCCCGGGCTGGAGTGGAGGACCAGGGTTACCTCCCAGCCACTTTTCACTCCTAGGGCCCTCCACTTCTGGCTGGCTCTTTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR CCA 90 bp | CTCAGAAAGAGCCAGCCAGAAGTGGAGGGCCCTAGGAGTGAAAAGTaGCTGGGAGGTAACCCTGGTCCTCCACTCCAGCCCGGGGCTCCA | + |
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Preference number: 1 (lower is better) Translates to: LRKSQPEVEGPRSEK*LGGNPGPPLQPGAP Trigger: TGGAGCCCCGGGCTGGAGTGGAGGACCAGGGTTACCTCCCAGCCACTTTTCACTCCTAGGGCCCTCCACTTCTGGCTGGCTCTTTCTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR CCA 90 bp | GCGGGCCACTCCTCTGTGGAGACCAAGAGTAACCCACCATGGCCCTaGGTCCTGGATGAGGTGATGGGTAAGGACCCAGAGGCCCACCAT | + |
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Preference number: 1 (lower is better) Translates to: AGHSSVETKSNPPWP*VLDEVMGKDPEAHH Trigger: ATGGTGGGCCTCTGGGTCCTTACCCATCACCTCATCCAGGACCCAGGGCCATGGTGGGTTACTCTTGGTCTCCACAGAGGAGTGGCCCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR TCA 90 bp | CTGGGAGGTAACCCTGGTCCTCCACTCCAGCCCGGGGCTCCAGGGTaGCCTCTAGGACGTCCAACCATACAATTTGAGGCCTGGGTTTCC | + |
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Preference number: 1 (lower is better) Translates to: LGGNPGPPLQPGAPG*PLGRPTIQFEAWVS Trigger: GGAAACCCAGGCCTCAAATTGTATGGTTGGACGTCCTAGAGGTCACCCTGGAGCCCCGGGCTGGAGTGGAGGACCAGGGTTACCTCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR TCA 90 bp | TGGAGACCAAGAGTAACCCACCATGGCCCTGGGTCCTGGATGAGGTaGTGGGTAAGGACCCAGAGGCCCACCATAGGAGGAAGGCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: WRPRVTHHGPGSWMR*WVRTQRPTIGGRLG Trigger: GCCCAGCCTTCCTCCTATGGTGGGCCTCTGGGTCCTTACCCATCACCTCATCCAGGACCCAGGGCCATGGTGGGTTACTCTTGGTCTCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR CCA 90 bp | GGATGGGCTGTAGGGCAAAGGGTAGGGAGTCACTACAGAGGGCTGTaGAGGCTGTTCTTCAGTCTCAGGCGGTGTCGCCTGGGGTACTGG | + |
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Preference number: 1 (lower is better) Translates to: GWAVGQRVGSHYRGL*RLFFSLRRCRLGYW Trigger: CCAGTACCCCAGGCGACACCGCCTGAGACTGAAGAACAGCCTCCACAGCCCTCTGTAGTGACTCCCTACCCTTTGCCCTACAGCCCATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237240.2 |
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| 3UTR TCA 90 bp | GAAGCCCGGGAGCTGAGGTTGTGTTGGGTAGGGAGGTTTGTTTCCTaGCGGGAGGTAGGGGGACTGCTGAGGATAACCAGGACCAGGGGT | + |
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Preference number: 1 (lower is better) Translates to: EARELRLCWVGRFVS*REVGGLLRITRTRG Trigger: ACCCCTGGTCCTGGTTATCCTCAGCAGTCCCCCTACCTCCCGTCAGGAAACAAACCTCCCTACCCAACACAACCTCAGCTCCCGGGCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR CCA 90 bp | GAAGGTGGACACAGACCAGGACTAATACCTAGGCCAGGCAGGCCCTaGAGGGTGGAAGCCATAGGAAGGGGTTGTCCCAGGAGGGTATGG | + |
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Preference number: 1 (lower is better) Translates to: EGGHRPGLIPRPGRP*RVEAIGRGCPRRVW Trigger: CCATACCCTCCTGGGACAACCCCTTCCTATGGCTTCCACCCTCCAGGGCCTGCCTGGCCTAGGTATTAGTCCTGGTCTGTGTCCACCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR GCA 90 bp | GAAGGACTCATGCTGCACTCTTCAGGGCCTTTCAGGAGGCCTATGTaGTTCCAACTCGAGGCTCGGGGCTTCTGTGTGTCCCAGCGTTTC | + |
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Preference number: 1 (lower is better) Translates to: EGLMLHSSGPFRRPM*FQLEARGFCVSQRF Trigger: GAAACGCTGGGACACACAGAAGCCCCGAGCCTCGAGTTGGAAGCACATAGGCCTCCTGAAAGGCCCTGAAGAGTGCAGCATGAGTCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR GCA 90 bp | CGCCTCACCACGTCCTGGAGCTTCTCTACGCGGACTCGACGCAGGTaGAGCAGTGTCCTCATGGAGGAAAAGGACTCTAAGAACGTTTCC | + |
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Preference number: 1 (lower is better) Translates to: RLTTSWSFSTRTRRR*SSVLMEEKDSKNVS Trigger: GGAAACGTTCTTAGAGTCCTTTTCCTCCATGAGGACACTGCTGCACCTGCGTCGAGTCCGCGTAGAGAAGCTCCAGGACGTGGTGAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237240.2 |
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| 3UTR TCA 90 bp | TGGTTCAGCTGTCAGGGATCAAGCGCAGGTAGCTATGCAAAGACATaGACACACCCGTTCATGCAGACACCAGAGAGCCCTGGGCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: WFSCQGSSAGSYAKT*THPFMQTPESPGLP Trigger: TGGGAGCCCAGGGCTCTCTGGTGTCTGCATGAACGGGTGTGTTCATGTCTTTGCATAGCTACCTGCGCTTGATCCCTGACAGCTGAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR CCA 90 bp | GGGCTGCTAGCAAATAAGATTCAAGGCACTAAAGGAGTGGAGGGGTaGGTGAACCTCAGAAAGAGCCAGCCAGAAGTGGAGGGCCCTAGG | + |
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Preference number: 1 (lower is better) Translates to: GLLANKIQGTKGVEG*VNLRKSQPEVEGPR Trigger: CCTAGGGCCCTCCACTTCTGGCTGGCTCTTTCTGAGGTTCACCCACCCCTCCACTCCTTTAGTGCCTTGAATCTTATTTGCTAGCAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR TCA 90 bp | TACAATTTCCTAACCCGTAGCAGCTCCAGGGTCCGCCCTGAGACCTaGTTTACATCTGGACCAGCCACACAGATGCATCACCTGCTGCAA | + |
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Preference number: 1 (lower is better) Translates to: YNFLTRSSSRVRPET*FTSGPATQMHHLLQ Trigger: TTGCAGCAGGTGATGCATCTGTGTGGCTGGTCCAGATGTAAATCAGGTCTCAGGGCGGACCCTGGAGCTGCTACGGGTTAGGAAATTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR CCA 90 bp | GGCGCATCACCACCACGTCCAGTGTTAACCTCAAATCTCAGCAAATaGAGGCCAAAGGCTGTGGTGCAGGTAGAAGGAAGAAGGTGGACA | + |
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Preference number: 1 (lower is better) Translates to: GASPPRPVLTSNLSK*RPKAVVQVEGRRWT Trigger: TGTCCACCTTCTTCCTTCTACCTGCACCACAGCCTTTGGCCTCCATTTGCTGAGATTTGAGGTTAACACTGGACGTGGTGGTGATGCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR GCA 90 bp | TCACTTTCATTACTAAGCAGGCTCCAGCCCACCCAGAGCCGGGGCTaGACTCACAGTCCCTACCCTTTACATTCTGAGAATGAGAGTGTA | + |
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Preference number: 1 (lower is better) Translates to: SLSLLSRLQPTQSRG*THSPYPLHSENESV Trigger: TACACTCTCATTCTCAGAATGTAAAGGGTAGGGACTGTGAGTGCAGCCCCGGCTCTGGGTGGGCTGGAGCCTGCTTAGTAATGAAAGTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR CCA 90 bp | AGGGTCCGAGACCCAGGGTCACCCTGCATCAAGATTATTCTACATTaGTTCAGCTGTCAGGGATCAAGCGCAGGTAGCTATGCAAAGACA | + |
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Preference number: 1 (lower is better) Translates to: RVRDPGSPCIKIILH*FSCQGSSAGSYAKT Trigger: TGTCTTTGCATAGCTACCTGCGCTTGATCCCTGACAGCTGAACCAATGTAGAATAATCTTGATGCAGGGTGACCCTGGGTCTCGGACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR CCA 90 bp | AAGGTAGAGCATCCTTTAGTGGACAGACAGAACTCTGTCATCACTTaGCATGTGATTCCACATCAAACATACCAAGCTCCAAGGGACAGC | + |
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Preference number: 1 (lower is better) Translates to: KVEHPLVDRQNSVIT*HVIPHQTYQAPRDS Trigger: GCTGTCCCTTGGAGCTTGGTATGTTTGATGTGGAATCACATGCCAAGTGATGACAGAGTTCTGTCTGTCCACTAAAGGATGCTCTACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR TCA 90 bp | TGGTCCTCCACTCCAGCCCGGGGCTCCAGGGTGACCTCTAGGACGTCCAACCATCCACTCAGGATGTGCTaGGCAGTCCCTGGCAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: WSSTPARGSRVTSRTSNHPLRMC*AVPGRR Trigger: CCTTCTGCCAGGGACTGCTCAGCACATCCTGAGTGG...ATGGTTGGACGTCCTAGAGGTCACCCTGGAGCCCCGGGCTGGAGTGGAGGACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCTCCCAGAAGGACTCATGCTGCACTCTTCAGGGCCTTTCAGGAGGCCTATGGGGGGCACAGGAGGCTaGGGCTGTCCTGGGAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: ELPEGLMLHSSGPFRRPMGGTGG*GCPGKP Trigger: GGGCTTCCCAGGACAGCCCCAGCCTCCTGTGCCCCC...CATAGGCCTCCTGAAAGGCCCTGAAGAGTGCAGCATGAGTCCTTCTGGGAGCTC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAGTGAAAAGTGGCTGGGAGGTAACCCTGGTCCTCCACTCCAGCCCGGGGCTGAGTGGAGGGGTGGGTaGACCTCAGAAAGAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: RSEKWLGGNPGPPLQPGAEWRGG*TSERAS Trigger: GCTGGCTCTTTCTGAGGTTCACCCACCCCTCCACTC...AGCCCCGGGCTGGAGTGGAGGACCAGGGTTACCTCCCAGCCACTTTTCACTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGTGGAGGGGTGGGTGAACCTCAGAAAGAGCCAGCCAGAAGTGGAGGGCCCTGTGCTGAGCAGTCCCTaGCAGAAGGAGCTCCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: GVEGWVNLRKSQPEVEGPVLSSP*QKELPE Trigger: TTCTGGGAGCTCCTTCTGCCAGGGACTGCTCAGCAC...AGGGCCCTCCACTTCTGGCTGGCTCTTTCTGAGGTTCACCCACCCCTCCACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGAAGGTGGACACAGACCAGGACTAATACCTAGGCCAGGCAGGCCCTGGAGGGCCCACAGGCAAGCCTaGGGATGGGCTGTAGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: EEGGHRPGLIPRPGRPWRAHRQA*GWAVGQ Trigger: TTGCCCTACAGCCCATCCCCAGGCTTGCCTGTGGGC...CCTCCAGGGCCTGCCTGGCCTAGGTATTAGTCCTGGTCTGTGTCCACCTTCTTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGTCCCTGGCAGAAGGAGCTCCCAGAAGGACTCATGCTGCACTCTTCAGGGCCCACAGGCAAGCCTaGGGATGGGCTGTAGGGCAA | + |
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Preference number: 2 (lower is better) Translates to: EQSLAEGAPRRTHAALFRAHRQA*GWAVGQ Trigger: TTGCCCTACAGCCCATCCCCAGGCTTGCCTGTGGGC...CCTGAAGAGTGCAGCATGAGTCCTTCTGGGAGCTCCTTCTGCCAGGGACTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCACCCAGAGCCGGGGCTGCACTCACAGTCCCTACCCTTTACATTCTGAGAGTGGCACCAGAAGATaGGGTTCCTCCTTGACCCCC | + |
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Preference number: 2 (lower is better) Translates to: QPTQSRGCTHSPYPLHSESGTRR*GSSLTP Trigger: GGGGGTCAAGGAGGAACCCCATCTTCTGGTGCCACT...CTCAGAATGTAAAGGGTAGGGACTGTGAGTGCAGCCCCGGCTCTGGGTGGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCCCACCCAGAGCCGGGGCTGCACTCACAGTCCCTACCCTTTACATTCTGAGAGGCAAGCCTGGGGATaGGCTGTAGGGCAAAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: QPTQSRGCTHSPYPLHSERQAWG*AVGQRV Trigger: TACCCTTTGCCCTACAGCCCATCCCCAGGCTTGCCT...CTCAGAATGTAAAGGGTAGGGACTGTGAGTGCAGCCCCGGCTCTGGGTGGGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | CACCAGAGGCTGGGTACCCAGGCAAGGGATGTTTCAAGGCACATACAATTTCCTCTGGGGTACTGGGCGTaGGGGTGGCGGGCGCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: HQRLGTQARDVSRHIQFPLGYWA*GWRALW Trigger: CCAAAGCGCCCGCCACCCCCACGCCCAGTACCCCAG...AGGAAATTGTATGTGCCTTGAAACATCCCTTGCCTGGGTACCCAGCCTCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000237240.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGTGTCCCAGCGTTTCAGGGCGCATCACCACCACGTCCAGTGTTAACCTCCCACTCAGGATGTGCTaGGCAGTCCCTGGCAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: SVCPSVSGRITTTSSVNLPLRMC*AVPGRR Trigger: CCTTCTGCCAGGGACTGCTCAGCACATCCTGAGTGG...GAGGTTAACACTGGACGTGGTGGTGATGCGCCCTGAAACGCTGGGACACACAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | GGCACTAAAGGAGTGGAGGGGTGGGTGAACCTCAGAAAGAGCCAGCCAGAAGTGGGCCTGGGTTTCCCTTaGCATCCCCAGCTCTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: GTKGVEGWVNLRKSQPEVGLGFP*HPQLSH Trigger: GTGAGAGAGCTGGGGATGCCAAGGGAAACCCAGGCC...CACTTCTGGCTGGCTCTTTCTGAGGTTCACCCACCCCTCCACTCCTTTAGTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTCATTACTAAGCAGGCTCCAGCCCACCCAGAGCCGGGGCTGCACTCACAGTTGGGGGTGTTCTGTCTaGTGTCTGTTCTGCGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: LSLLSRLQPTQSRGCTHSWGCSV*CLFCGD Trigger: GTCCCCGCAGAACAGACACCAGACAGAACACCCCCA...ACTGTGAGTGCAGCCCCGGCTCTGGGTGGGCTGGAGCCTGCTTAGTAATGAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCCAGGGTCCGCCCTGAGACCTGATTTACATCTGGACCAGCCACACAGATGCAACCCACCATGGCCCTaGGTCCTGGATGAGGTGATG | + |
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Preference number: 2 (lower is better) Translates to: APGSALRPDLHLDQPHRCNPPWP*VLDEVM Trigger: CATCACCTCATCCAGGACCCAGGGCCATGGTGGGTT...GCATCTGTGTGGCTGGTCCAGATGTAAATCAGGTCTCAGGGCGGACCCTGGAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGCCCTGGGCTCCCAGCAGGCCACTCAGGATGTGCTGAGCAGTCCCTGGCAGCAGCAGTGTCCTCATaGAGGAAAAGGACTCTAAGA | + |
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Preference number: 2 (lower is better) Translates to: ESPGLPAGHSGCAEQSLAAAVSS*RKRTLR Trigger: TCTTAGAGTCCTTTTCCTCCATGAGGACACTGCTGC...TGCCAGGGACTGCTCAGCACATCCTGAGTGGCCTGCTGGGAGCCCAGGGCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237240.2 |
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| 3UTR-3UTR TCA 90 bp | CTCATGCTGCACTCTTCAGGGCCTTTCAGGAGGCCTATGTGCTTCCAACTCGAGGGGAGGTTTGTTTCCTaGCGGGAGGTAGGGGGACTG | + |
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Preference number: 2 (lower is better) Translates to: LMLHSSGPFRRPMCFQLEGRFVS*REVGGL Trigger: CAGTCCCCCTACCTCCCGTCAGGAAACAAACCTCCC...CTCGAGTTGGAAGCACATAGGCCTCCTGAAAGGCCCTGAAGAGTGCAGCATGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | AGGAGTGAAAAGTGGCTGGGAGGTAACCCTGGTCCTCCACTCCAGCCCGGGGCTTGTAGTGATGATGTCTaGGAAGCACCATGGGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: RSEKWLGGNPGPPLQPGACSDDV*EAPWGC Trigger: ACACCCCCATGGTGCTTCCCAGACATCATCACTACA...AGCCCCGGGCTGGAGTGGAGGACCAGGGTTACCTCCCAGCCACTTTTCACTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | ATTGGTTCAGCTGTCAGGGATCAAGCGCAGGTAGCTATGCAAAGACATGAACACCACAGGGAAGGGGGCTaGCTGCAGGGCTCCCTGGGC | + |
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Preference number: 2 (lower is better) Translates to: IGSAVRDQAQVAMQRHEHHREGG*LQGSLG Trigger: GCCCAGGGAGCCCTGCAGCCAGCCCCCTTCCCTGTG...GTGTTCATGTCTTTGCATAGCTACCTGCGCTTGATCCCTGACAGCTGAACCAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGCTCCCAGAAGGACTCATGCTGCACTCTTCAGGGCCTTTCAGGAGGCCTAACCCACCATGGCCCTaGGTCCTGGATGAGGTGATG | + |
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Preference number: 2 (lower is better) Translates to: KELPEGLMLHSSGPFRRPNPPWP*VLDEVM Trigger: CATCACCTCATCCAGGACCCAGGGCCATGGTGGGTT...AGGCCTCCTGAAAGGCCCTGAAGAGTGCAGCATGAGTCCTTCTGGGAGCTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGAAAGGGGGCTGCTAGCAAATAAGATTCAAGGCACTAAAGGAGTGGAGGGGGATGGGGTTCCTCCTTaGCCCCCAGCACCTTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: RERGLLANKIQGTKGVEGDGVPP*PPAPWP Trigger: GGGCCAAGGTGCTGGGGGTCAAGGAGGAACCCCATC...CCCCTCCACTCCTTTAGTGCCTTGAATCTTATTTGCTAGCAGCCCCCTTTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGATTTACATCTGGACCAGCCACACAGATGCATCACCTGCTGCAACCCCTGTGGGAGGTTTGTTTCCTaGCGGGAGGTAGGGGGACTG | + |
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Preference number: 2 (lower is better) Translates to: PDLHLDQPHRCITCCNPCGRFVS*REVGGL Trigger: CAGTCCCCCTACCTCCCGTCAGGAAACAAACCTCCC...ACAGGGGTTGCAGCAGGTGATGCATCTGTGTGGCTGGTCCAGATGTAAATCAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGGCACTAAAGGAGTGGAGGGGTGGGTGAACCTCAGAAAGAGCCAGCCAGAAAGTGGCACCAGAAGATaGGGTTCCTCCTTGACCCCC | + |
|
Preference number: 2 (lower is better) Translates to: QGTKGVEGWVNLRKSQPESGTRR*GSSLTP Trigger: GGGGGTCAAGGAGGAACCCCATCTTCTGGTGCCACT...TTCTGGCTGGCTCTTTCTGAGGTTCACCCACCCCTCCACTCCTTTAGTGCCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR TCA 90 bp | GGCTGGGTACCCAGGCAAGGGATGTTTCAAGGCACATACAATTTCCTAACCCGTCCACTCAGGATGTGCTaGGCAGTCCCTGGCAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GWVPRQGMFQGTYNFLTRPLRMC*AVPGRR Trigger: CCTTCTGCCAGGGACTGCTCAGCACATCCTGAGTGG...ACGGGTTAGGAAATTGTATGTGCCTTGAAACATCCCTTGCCTGGGTACCCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | CACCAGAGGCTGGGTACCCAGGCAAGGGATGTTTCAAGGCACATACAATTTCCTGGCCTGGGTTTCCCTTaGCATCCCCAGCTCTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: HQRLGTQARDVSRHIQFPGLGFP*HPQLSH Trigger: GTGAGAGAGCTGGGGATGCCAAGGGAAACCCAGGCC...AGGAAATTGTATGTGCCTTGAAACATCCCTTGCCTGGGTACCCAGCCTCTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCTGGTGTCTGTTCTGCGGGGACACTGGGAAAAGGAAGGAGATAAACAAGGGCCGGTGGGCAGAGTaGCACCAGAAGATGGGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: SVWCLFCGDTGKRKEINKGRWAE*HQKMGF Trigger: GAACCCCATCTTCTGGTGCCACTCTGCCCACCGGCC...CTTGTTTATCTCCTTCCTTTTCCCAGTGTCCCCGCAGAACAGACACCAGACAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR TCA 90 bp | GCTATAAATAATTTAGGAGAAGCAAGCAGATGTGGTAATGCACCCGTGGCCGGTGATGGGGTTCCTCCTTaGCCCCCAGCACCTTGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: AINNLGEASRCGNAPVAGDGVPP*PPAPWP Trigger: GGGCCAAGGTGCTGGGGGTCAAGGAGGAACCCCATC...ACCGGCCACGGGTGCATTACCACATCTGCTTGCTTCTCCTAAATTATTTATAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | CTTTCATTACTAAGCAGGCTCCAGCCCACCCAGAGCCGGGGCTGCACTCACAGTTCAAATCTCAGCAAATaGAGGCCAAAGGCTGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: LSLLSRLQPTQSRGCTHSSNLSK*RPKAVV Trigger: CACCACAGCCTTTGGCCTCCATTTGCTGAGATTTGA...ACTGTGAGTGCAGCCCCGGCTCTGGGTGGGCTGGAGCCTGCTTAGTAATGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCTGGTGTCTGTTCTGCGGGGACACTGGGAAAAGGAAGGAGATAAACAAGCTCCAAGGGACAGCCTaGATGAGCAGGGTCCGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: SVWCLFCGDTGKRKEINKLQGTA*MSRVRD Trigger: GTCTCGGACCCTGCTCATCCAGGCTGTCCCTTGGAG...CTTGTTTATCTCCTTCCTTTTCCCAGTGTCCCCGCAGAACAGACACCAGACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCAGAGTGGCACCAGAAGATGGGGTTCCTCCTTGACCCCCAGCACCTTGGCCACGGCAGCTAAAATATaGCTTTCAGGAATCAAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: GQSGTRRWGSSLTPSTLATAAKI*LSGIKV Trigger: GACTTTGATTCCTGAAAGCCATATTTTAGCTGCCGT...GGCCAAGGTGCTGGGGGTCAAGGAGGAACCCCATCTTCTGGTGCCACTCTGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTCTGGTGTCTGTTCTGCGGGGACACTGGGAAAAGGAAGGAGATAAACAAGGGCCTGGGTTTCCCTTaGCATCCCCAGCTCTCTCAC | + |
|
Preference number: 2 (lower is better) Translates to: SVWCLFCGDTGKRKEINKGLGFP*HPQLSH Trigger: GTGAGAGAGCTGGGGATGCCAAGGGAAACCCAGGCC...CTTGTTTATCTCCTTCCTTTTCCCAGTGTCCCCGCAGAACAGACACCAGACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCGGTGGGCAGAGTGGCACCAGAAGATGGGGTTCCTCCTTGACCCCCAGCACAATTGCACAAACAAATaGGCAGTCATTATCCAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: GRWAEWHQKMGFLLDPQHNCTNK*AVIIQF Trigger: GAACTGGATAATGACTGCCCATTTGTTTGTGCAATT...GTGCTGGGGGTCAAGGAGGAACCCCATCTTCTGGTGCCACTCTGCCCACCGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGTAAATAAGGTAGAGCATCCTTTAGTGGACAGACAGAACTCTGTCATCACTCACAGGGAAGGGGGCTaGCTGCAGGGCTCCCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: VVNKVEHPLVDRQNSVITHREGG*LQGSLG Trigger: GCCCAGGGAGCCCTGCAGCCAGCCCCCTTCCCTGTG...AGTGATGACAGAGTTCTGTCTGTCCACTAAAGGATGCTCTACCTTATTTACCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGTAAATAAGGTAGAGCATCCTTTAGTGGACAGACAGAACTCTGTCATCACTGGGGGCACAGGAGGCTaGGGCTGTCCTGGGAAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: VVNKVEHPLVDRQNSVITGGTGG*GCPGKP Trigger: GGGCTTCCCAGGACAGCCCCAGCCTCCTGTGCCCCC...AGTGATGACAGAGTTCTGTCTGTCCACTAAAGGATGCTCTACCTTATTTACCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR TCA 90 bp | ATTGGTTCAGCTGTCAGGGATCAAGCGCAGGTAGCTATGCAAAGACATGAACACCCACTCAGGATGTGCTaGGCAGTCCCTGGCAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: IGSAVRDQAQVAMQRHEHPLRMC*AVPGRR Trigger: CCTTCTGCCAGGGACTGCTCAGCACATCCTGAGTGG...GTGTTCATGTCTTTGCATAGCTACCTGCGCTTGATCCCTGACAGCTGAACCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGTCTGGTGTCTGTTCTGCGGGGACACTGGGAAAAGGAAGGAGATAAACAAGGTCCGCCCTGAGACCTaGTTTACATCTGGACCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: SVWCLFCGDTGKRKEINKVRPET*FTSGPA Trigger: GGCTGGTCCAGATGTAAATCAGGTCTCAGGGCGGAC...CTTGTTTATCTCCTTCCTTTTCCCAGTGTCCCCGCAGAACAGACACCAGACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR GCA 90 bp | TGTTCTGTCTGGTGTCTGTTCTGCGGGGACACTGGGAAAAGGAAGGAGATAAACGACCAGCCACACAGATaGATCACCTGCTGCAACCCC | + |
|
Preference number: 2 (lower is better) Translates to: CSVWCLFCGDTGKRKEINDQPHR*ITCCNP Trigger: GGGGTTGCAGCAGGTGATGCATCTGTGTGGCTGGTC...GTTTATCTCCTTCCTTTTCCCAGTGTCCCCGCAGAACAGACACCAGACAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTCCTCCACTCCAGCCCGGGGCTCCAGGGTGACCTCTAGGACGTCCAACCATAAGATTATTCTACATTaGTTCAGCTGTCAGGGATCA | + |
|
Preference number: 2 (lower is better) Translates to: WSSTPARGSRVTSRTSNHKIILH*FSCQGS Trigger: TGATCCCTGACAGCTGAACCAATGTAGAATAATCTT...ATGGTTGGACGTCCTAGAGGTCACCCTGGAGCCCCGGGCTGGAGTGGAGGACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | AAATGGGCAGTCATTATCCAGTTCAGCAGCAGTCTCACAGATGCCATTAGTGATAGGCCAGGCAGGCCCTaGAGGGTGGAAGCCATAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KWAVIIQFSSSLTDAISDRPGRP*RVEAIG Trigger: TCCTATGGCTTCCACCCTCCAGGGCCTGCCTGGCCT...ATCACTAATGGCATCTGTGAGACTGCTGCTGAACTGGATAATGACTGCCCATTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | GCTCCAGGGTCCGCCCTGAGACCTGATTTACATCTGGACCAGCCACACAGATGCAACTCTGTCATCACTTaGCATGTGATTCCACATCAA | + |
|
Preference number: 2 (lower is better) Translates to: APGSALRPDLHLDQPHRCNSVIT*HVIPHQ Trigger: TTGATGTGGAATCACATGCCAAGTGATGACAGAGTT...GCATCTGTGTGGCTGGTCCAGATGTAAATCAGGTCTCAGGGCGGACCCTGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGAAAGGGGGCTGCTAGCAAATAAGATTCAAGGCACTAAAGGAGTGGAGGGGAAAGGAGTGGAGGGGTaGGTGAACCTCAGAAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: RERGLLANKIQGTKGVEGKGVEG*VNLRKS Trigger: GCTCTTTCTGAGGTTCACCCACCCCTCCACTCCTTT...CCCCTCCACTCCTTTAGTGCCTTGAATCTTATTTGCTAGCAGCCCCCTTTCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | AGACAGAACTCTGTCATCACTTGGCATGTGATTCCACATCAAACATACCAAGCTCTCCAAGGGACAGCCTaGATGAGCAGGGTCCGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: RQNSVITWHVIPHQTYQALQGTA*MSRVRD Trigger: GTCTCGGACCCTGCTCATCCAGGCTGTCCCTTGGAG...AGCTTGGTATGTTTGATGTGGAATCACATGCCAAGTGATGACAGAGTTCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGATCAAGCGCAGGTAGCTATGCAAAGACATGAACACACCCGTTCATGCAGAAGCTATGCAAAGACATaGACACACCCGTTCATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: RDQAQVAMQRHEHTRSCRSYAKT*THPFMQ Trigger: CTGCATGAACGGGTGTGTTCATGTCTTTGCATAGCT...TCTGCATGAACGGGTGTGTTCATGTCTTTGCATAGCTACCTGCGCTTGATCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | CGCATCACCACCACGTCCAGTGTTAACCTCAAATCTCAGCAAATGGAGGCCAAATCAAATCTCAGCAAATaGAGGCCAAAGGCTGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: RITTTSSVNLKSQQMEAKSNLSK*RPKAVV Trigger: CACCACAGCCTTTGGCCTCCATTTGCTGAGATTTGA...TTTGGCCTCCATTTGCTGAGATTTGAGGTTAACACTGGACGTGGTGGTGATGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | GACAGACAGAACTCTGTCATCACTTGGCATGTGATTCCACATCAAACATACCAAGTGCTGAGCAGTCCCTaGCAGAAGGAGCTCCCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: DRQNSVITWHVIPHQTYQVLSSP*QKELPE Trigger: TTCTGGGAGCTCCTTCTGCCAGGGACTGCTCAGCAC...TTGGTATGTTTGATGTGGAATCACATGCCAAGTGATGACAGAGTTCTGTCTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | ACCAGAGGCTGGGTACCCAGGCAAGGGATGTTTCAAGGCACATACAATTTCCTAGTTCTGCGGGGACACTaGGAAAAGGAAGGAGATAAA | + |
|
Preference number: 2 (lower is better) Translates to: TRGWVPRQGMFQGTYNFLVLRGH*EKEGDK Trigger: TTTATCTCCTTCCTTTTCCCAGTGTCCCCGCAGAAC...TAGGAAATTGTATGTGCCTTGAAACATCCCTTGCCTGGGTACCCAGCCTCTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | GACAGACAGAACTCTGTCATCACTTGGCATGTGATTCCACATCAAACATACCAAAGGCAAGCCTGGGGATaGGCTGTAGGGCAAAGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: DRQNSVITWHVIPHQTYQRQAWG*AVGQRV Trigger: TACCCTTTGCCCTACAGCCCATCCCCAGGCTTGCCT...TTGGTATGTTTGATGTGGAATCACATGCCAAGTGATGACAGAGTTCTGTCTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | CAGACAGAACTCTGTCATCACTTGGCATGTGATTCCACATCAAACATACCAAGCAAAGGAGTGGAGGGGTaGGTGAACCTCAGAAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: QTELCHHLACDSTSNIPSKGVEG*VNLRKS Trigger: GCTCTTTCTGAGGTTCACCCACCCCTCCACTCCTTT...GCTTGGTATGTTTGATGTGGAATCACATGCCAAGTGATGACAGAGTTCTGTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGGCTGGGTACCCAGGCAAGGGATGTTTCAAGGCACATACAATTTCCTAACCGTAGAAGGAAGAAGGTaGACACAGACCAGGACTAAT | + |
|
Preference number: 2 (lower is better) Translates to: RGWVPRQGMFQGTYNFLTVEGRR*TQTRTN Trigger: ATTAGTCCTGGTCTGTGTCCACCTTCTTCCTTCTAC...GGTTAGGAAATTGTATGTGCCTTGAAACATCCCTTGCCTGGGTACCCAGCCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAATGGGCAGTCATTATCCAGTTCAGCAGCAGTCTCACAGATGCCATTAGTGTCAAATCTCAGCAAATaGAGGCCAAAGGCTGTGGTG | + |
|
Preference number: 2 (lower is better) Translates to: TNGQSLSSSAAVSQMPLVSNLSK*RPKAVV Trigger: CACCACAGCCTTTGGCCTCCATTTGCTGAGATTTGA...CACTAATGGCATCTGTGAGACTGCTGCTGAACTGGATAATGACTGCCCATTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | GCTATAAATAATTTAGGAGAAGCAAGCAGATGTGGTAATGCACCCGTGGCCGGTGTTCTGCGGGGACACTaGGAAAAGGAAGGAGATAAA | + |
|
Preference number: 2 (lower is better) Translates to: AINNLGEASRCGNAPVAGVLRGH*EKEGDK Trigger: TTTATCTCCTTCCTTTTCCCAGTGTCCCCGCAGAAC...ACCGGCCACGGGTGCATTACCACATCTGCTTGCTTCTCCTAAATTATTTATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGCAGTCATTATCCAGTTCAGCAGCAGTCTCACAGATGCCATTAGTGATTCCTCATCACTTGGCATGTaGTTCCACATCAAACATACC | + |
|
Preference number: 2 (lower is better) Translates to: WAVIIQFSSSLTDAISDSSSLGM*FHIKHT Trigger: GGTATGTTTGATGTGGAATCACATGCCAAGTGATGA...GGAATCACTAATGGCATCTGTGAGACTGCTGCTGAACTGGATAATGACTGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | AGGGATCAAGCGCAGGTAGCTATGCAAAGACATGAACACACCCGTTCATGCAGAAACTCTGTCATCACTTaGCATGTGATTCCACATCAA | + |
|
Preference number: 2 (lower is better) Translates to: RDQAQVAMQRHEHTRSCRNSVIT*HVIPHQ Trigger: TTGATGTGGAATCACATGCCAAGTGATGACAGAGTT...TCTGCATGAACGGGTGTGTTCATGTCTTTGCATAGCTACCTGCGCTTGATCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTTCTGTCTGGTGTCTGTTCTGCGGGGACACTGGGAAAAGGAAGGAGATAAAACGGCAGCTAAAATATaGCTTTCAGGAATCAAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: VFCLVSVLRGHWEKEGDKTAAKI*LSGIKV Trigger: GACTTTGATTCCTGAAAGCCATATTTTAGCTGCCGT...TTTATCTCCTTCCTTTTCCCAGTGTCCCCGCAGAACAGACACCAGACAGAACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | AAATGGGCAGTCATTATCCAGTTCAGCAGCAGTCTCACAGATGCCATTAGTGATAACTCTGTCATCACTTaGCATGTGATTCCACATCAA | + |
|
Preference number: 2 (lower is better) Translates to: KWAVIIQFSSSLTDAISDNSVIT*HVIPHQ Trigger: TTGATGTGGAATCACATGCCAAGTGATGACAGAGTT...ATCACTAATGGCATCTGTGAGACTGCTGCTGAACTGGATAATGACTGCCCATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CCA 90 bp | AATGGGCAGTCATTATCCAGTTCAGCAGCAGTCTCACAGATGCCATTAGTGATTACGGCAGCTAAAATATaGCTTTCAGGAATCAAAGTC | + |
|
Preference number: 2 (lower is better) Translates to: NGQSLSSSAAVSQMPLVITAAKI*LSGIKV Trigger: GACTTTGATTCCTGAAAGCCATATTTTAGCTGCCGT...AATCACTAATGGCATCTGTGAGACTGCTGCTGAACTGGATAATGACTGCCCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| 3UTR CCA 72 bp | CGCCTGGGGTACTGGGCGTGGGGGTGGCGGGCGCTTTaGAGGGACATCTCCAGCCAGCTCCGGCAAAGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: RLGYWAWGWRAL*RDISSQLRQSS Trigger: CGAGCTTTGCCGGAGCTGGCTGGAGATGTCCCTCCAAAGCGCCCGCCACCCCCACGCCCAGTACCCCAGGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237240.2 |
||
| 3UTR CCA 72 bp | CTCAGGCGGTGTCGCCTGGGGTACTGGGCGTGGGGGTaGCGGGCGCTTTGGAGGGACATCTCCAGCCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: LRRCRLGYWAWG*RALWRDISSQL Trigger: GAGCTGGCTGGAGATGTCCCTCCAAAGCGCCCGCCACCCCCACGCCCAGTACCCCAGGCGACACCGCCTGAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237240.2 |
||
| 3UTR CCA 72 bp | CAGGGCTCCCTGGGCTGTCGGGCCCACAGGCAAGCCTaGGGATGGGCTGTAGGGCAAAGGGTAGGGAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QGSLGCRAHRQA*GWAVGQRVGSH Trigger: GTGACTCCCTACCCTTTGCCCTACAGCCCATCCCCAGGCTTGCCTGTGGGCCCGACAGCCCAGGGAGCCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
||
| 3UTR CCA 72 bp | TGTGGAGGCTGTTCTTCAGTCTCAGGCGGTGTCGCCTaGGGTACTGGGCGTGGGGGTGGCGGGCGCTTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: CGGCSSVSGGVA*GTGRGGGGRFG Trigger: TCCAAAGCGCCCGCCACCCCCACGCCCAGTACCCCAGGCGACACCGCCTGAGACTGAAGAACAGCCTCCACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000237240.2 |
||
| 3UTR TCA 72 bp | GAGCCCTGGGCTCCCAGCAGGCCACTCAGGATGTGCTaGGCAGTCCCTGGCAGAAGGAGCTCCCAGAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: EPWAPSRPLRMC*AVPGRRSSQKD Trigger: GTCCTTCTGGGAGCTCCTTCTGCCAGGGACTGCTCAGCACATCCTGAGTGGCCTGCTGGGAGCCCAGGGCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR CCA 72 bp | CGTAGGATAGCCAGGCTGGGGCGGGCCACTCCTCTGTaGAGACCAAGAGTAACCCACCATGGCCCTGGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: RRIARLGRATPL*RPRVTHHGPGS Trigger: GGACCCAGGGCCATGGTGGGTTACTCTTGGTCTCCACAGAGGAGTGGCCCGCCCCAGCCTGGCTATCCTACG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
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| 3UTR-3UTR CAA 90 bp | GCTCCAGGGTCCGCCCTGAGACCTGATTTACATCTGGACCAGCCACACAGATGCTTGACCCCCAGCACCTaGGCCCACCAGAGGCTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: APGSALRPDLHLDQPHRCLTPST*AHQRLG Trigger: ACCCAGCCTCTGGTGGGCCAAGGTGCTGGGGGTCAA...GCATCTGTGTGGCTGGTCCAGATGTAAATCAGGTCTCAGGGCGGACCCTGGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCCGGTGGGCAGAGTGGCACCAGAAGATGGGGTTCCTCCTTGACCCCCAGCACGGAGCTGAGGTTGTGTaGGGTAGGGAGGTTTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GRWAEWHQKMGFLLDPQHGAEVV*GREVCF Trigger: GAAACAAACCTCCCTACCCAACACAACCTCAGCTCC...GTGCTGGGGGTCAAGGAGGAACCCCATCTTCTGGTGCCACTCTGCCCACCGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
||
| 3UTR CCA 72 bp | TCCCAGCAGGCCACTCAGGATGTGCTGAGCAGTCCCTaGCAGAAGGAGCTCCCAGAAGGACTCATGCTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SQQATQDVLSSP*QKELPEGLMLH Trigger: GTGCAGCATGAGTCCTTCTGGGAGCTCCTTCTGCCAGGGACTGCTCAGCACATCCTGAGTGGCCTGCTGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR TCA 72 bp | AGAGTAACCCACCATGGCCCTGGGTCCTGGATGAGGTaGTGGGTAAGGACCCAGAGGCCCACCATAGGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: RVTHHGPGSWMR*WVRTQRPTIGG Trigger: TCCTCCTATGGTGGGCCTCTGGGTCCTTACCCATCACCTCATCCAGGACCCAGGGCCATGGTGGGTTACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
||
| 3UTR GCA 72 bp | CCCTTGGCATCCCCAGCTCTCTCACCATACCACTGCTaGTATGGTCTCTGCCAGCACGTAGGACACGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PLASPALSPYHC*YGLCQHVGHAC Trigger: GCAAGCGTGTCCTACGTGCTGGCAGAGACCATAGCAGCAGTGGTATGGTGAGAGAGCTGGGGATGCCAAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR CCA 72 bp | GGCCACTCCTCTGTGGAGACCAAGAGTAACCCACCATaGCCCTGGGTCCTGGATGAGGTGATGGGTAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GHSSVETKSNPP*PWVLDEVMGKD Trigger: GTCCTTACCCATCACCTCATCCAGGACCCAGGGCCATGGTGGGTTACTCTTGGTCTCCACAGAGGAGTGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
||
| 3UTR CCA 72 bp | GTAGGGCAAAGGGTAGGGAGTCACTACAGAGGGCTGTaGAGGCTGTTCTTCAGTCTCAGGCGGTGTCGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: VGQRVGSHYRGL*RLFFSLRRCRL Trigger: CAGGCGACACCGCCTGAGACTGAAGAACAGCCTCCACAGCCCTCTGTAGTGACTCCCTACCCTTTGCCCTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000237240.2 |
||
| 3UTR GCA 72 bp | GTCCCTGGCAGAAGGAGCTCCCAGAAGGACTCATGCTaGACTCTTCAGGGCCTTTCAGGAGGCCTATGTGCT | + |
|
Preference number: 3 (lower is better) Translates to: VPGRRSSQKDSC*TLQGLSGGLCA Trigger: AGCACATAGGCCTCCTGAAAGGCCCTGAAGAGTGCAGCATGAGTCCTTCTGGGAGCTCCTTCTGCCAGGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR GCA 72 bp | GCAGTCCCTGGCAGAAGGAGCTCCCAGAAGGACTCATaGTGCACTCTTCAGGGCCTTTCAGGAGGCCTATGT | + |
|
Preference number: 3 (lower is better) Translates to: AVPGRRSSQKDS*CTLQGLSGGLC Trigger: ACATAGGCCTCCTGAAAGGCCCTGAAGAGTGCAGCATGAGTCCTTCTGGGAGCTCCTTCTGCCAGGGACTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR CCA 72 bp | TTCCACATCAAACATACCAAGCTCCAAGGGACAGCCTaGATGAGCAGGGTCCGAGACCCAGGGTCACCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FHIKHTKLQGTA*MSRVRDPGSPC Trigger: GCAGGGTGACCCTGGGTCTCGGACCCTGCTCATCCAGGCTGTCCCTTGGAGCTTGGTATGTTTGATGTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR TCA 72 bp | ACATCAAACATACCAAGCTCCAAGGGACAGCCTGGATaGGCAGGGTCCGAGACCCAGGGTCACCCTGCATCA | + |
|
Preference number: 3 (lower is better) Translates to: TSNIPSSKGQPG*AGSETQGHPAS Trigger: TGATGCAGGGTGACCCTGGGTCTCGGACCCTGCTCATCCAGGCTGTCCCTTGGAGCTTGGTATGTTTGATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR TCA 72 bp | GAGCTGAGGTTGTGTTGGGTAGGGAGGTTTGTTTCCTaGCGGGAGGTAGGGGGACTGCTGAGGATAACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ELRLCWVGRFVS*REVGGLLRITR Trigger: CCTGGTTATCCTCAGCAGTCCCCCTACCTCCCGTCAGGAAACAAACCTCCCTACCCAACACAACCTCAGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
||
| 3UTR GCA 72 bp | TTTCCCTTGGCATCCCCAGCTCTCTCACCATACCACTaGTGCTATGGTCTCTGCCAGCACGTAGGACACGCT | + |
|
Preference number: 3 (lower is better) Translates to: FPLASPALSPYH*CYGLCQHVGHA Trigger: AGCGTGTCCTACGTGCTGGCAGAGACCATAGCAGCAGTGGTATGGTGAGAGAGCTGGGGATGCCAAGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR GCA 72 bp | ACGTCCTGGAGCTTCTCTACGCGGACTCGACGCAGGTaGAGCAGTGTCCTCATGGAGGAAAAGGACTCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: TSWSFSTRTRRR*SSVLMEEKDSK Trigger: CTTAGAGTCCTTTTCCTCCATGAGGACACTGCTGCACCTGCGTCGAGTCCGCGTAGAGAAGCTCCAGGACGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237240.2 |
||
| 3UTR GCA 72 bp | TTACTAAGCAGGCTCCAGCCCACCCAGAGCCGGGGCTaGACTCACAGTCCCTACCCTTTACATTCTGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: LLSRLQPTQSRG*THSPYPLHSEN Trigger: ATTCTCAGAATGTAAAGGGTAGGGACTGTGAGTGCAGCCCCGGCTCTGGGTGGGCTGGAGCCTGCTTAGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCTGTCTGGTGTCTGTTCTGCGGGGACACTGGGAAAAGGAAGGAGATAAACAGGCCTGGGTTTCCCTaGGCATCCCCAGCTCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: CSVWCLFCGDTGKRKEINRPGFP*ASPALS Trigger: TGAGAGAGCTGGGGATGCCAAGGGAAACCCAGGCCT...GTTTATCTCCTTCCTTTTCCCAGTGTCCCCGCAGAACAGACACCAGACAGAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTGTCTGGTGTCTGTTCTGCGGGGACACTGGGAAAAGGAAGGAGATAAACAAGGCCCGGGAGCTGAGGTaGTGTTGGGTAGGGAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: SVWCLFCGDTGKRKEINKARELR*CWVGRF Trigger: AAACCTCCCTACCCAACACAACCTCAGCTCCCGGGC...CTTGTTTATCTCCTTCCTTTTCCCAGTGTCCCCGCAGAACAGACACCAGACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
||
| 3UTR GCA 72 bp | GCCTGGATGAGCAGGGTCCGAGACCCAGGGTCACCCTaGATCAAGATTATTCTACATTGGTTCAGCTGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: AWMSRVRDPGSP*IKIILHWFSCQ Trigger: CTGACAGCTGAACCAATGTAGAATAATCTTGATGCAGGGTGACCCTGGGTCTCGGACCCTGCTCATCCAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR TCA 72 bp | TGTCAGGGATCAAGCGCAGGTAGCTATGCAAAGACATaGACACACCCGTTCATGCAGACACCAGAGAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: CQGSSAGSYAKT*THPFMQTPESP Trigger: AGGGCTCTCTGGTGTCTGCATGAACGGGTGTGTTCATGTCTTTGCATAGCTACCTGCGCTTGATCCCTGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGAGCTCCCAGAAGGACTCATGCTGCACTCTTCAGGGCCTTTCAGGAGGCCTCAAGATTATTCTACATaGGTTCAGCTGTCAGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: KELPEGLMLHSSGPFRRPQDYST*VQLSGI Trigger: GATCCCTGACAGCTGAACCAATGTAGAATAATCTTG...AGGCCTCCTGAAAGGCCCTGAAGAGTGCAGCATGAGTCCTTCTGGGAGCTCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTATTCTACATTGGTTCAGCTGTCAGGGATCAAGCGCAGGTAGCTATGCAAAGGCCCGGGAGCTGAGGTaGTGTTGGGTAGGGAGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: IILHWFSCQGSSAGSYAKARELR*CWVGRF Trigger: AAACCTCCCTACCCAACACAACCTCAGCTCCCGGGC...CTTTGCATAGCTACCTGCGCTTGATCCCTGACAGCTGAACCAATGTAGAATAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
||
| 3UTR CCA 72 bp | CCACCACGTCCAGTGTTAACCTCAAATCTCAGCAAATaGAGGCCAAAGGCTGTGGTGCAGGTAGAAGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: PPRPVLTSNLSK*RPKAVVQVEGR Trigger: TCTTCCTTCTACCTGCACCACAGCCTTTGGCCTCCATTTGCTGAGATTTGAGGTTAACACTGGACGTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR CCA 72 bp | GCAAATAAGATTCAAGGCACTAAAGGAGTGGAGGGGTaGGTGAACCTCAGAAAGAGCCAGCCAGAAGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: ANKIQGTKGVEG*VNLRKSQPEVE Trigger: CTCCACTTCTGGCTGGCTCTTTCTGAGGTTCACCCACCCCTCCACTCCTTTAGTGCCTTGAATCTTATTTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACAGAACTCTGTCATCACTTGGCATGTGATTCCACATCAAACATACCAAGCTAGGCCTGGGTTTCCCTaGGCATCCCCAGCTCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RQNSVITWHVIPHQTYQARPGFP*ASPALS Trigger: TGAGAGAGCTGGGGATGCCAAGGGAAACCCAGGCCT...AGCTTGGTATGTTTGATGTGGAATCACATGCCAAGTGATGACAGAGTTCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR CCA 72 bp | GACCCAGGGTCACCCTGCATCAAGATTATTCTACATTaGTTCAGCTGTCAGGGATCAAGCGCAGGTAGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: DPGSPCIKIILH*FSCQGSSAGSY Trigger: ATAGCTACCTGCGCTTGATCCCTGACAGCTGAACCAATGTAGAATAATCTTGATGCAGGGTGACCCTGGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCACCAGAGGCTGGGTACCCAGGCAAGGGATGTTTCAAGGCACATACAATTTCCAAGATTATTCTACATaGGTTCAGCTGTCAGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: PTRGWVPRQGMFQGTYNFQDYST*VQLSGI Trigger: GATCCCTGACAGCTGAACCAATGTAGAATAATCTTG...GAAATTGTATGTGCCTTGAAACATCCCTTGCCTGGGTACCCAGCCTCTGGTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGGGCAGTCATTATCCAGTTCAGCAGCAGTCTCACAGATGCCATTAGTGATTGGAGCTGAGGTTGTGTaGGGTAGGGAGGTTTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: NGQSLSSSAAVSQMPLVIGAEVV*GREVCF Trigger: GAAACAAACCTCCCTACCCAACACAACCTCAGCTCC...AATCACTAATGGCATCTGTGAGACTGCTGCTGAACTGGATAATGACTGCCCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
||
| 3UTR CCA 72 bp | CATCCTTTAGTGGACAGACAGAACTCTGTCATCACTTaGCATGTGATTCCACATCAAACATACCAAGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: HPLVDRQNSVIT*HVIPHQTYQAP Trigger: TGGAGCTTGGTATGTTTGATGTGGAATCACATGCCAAGTGATGACAGAGTTCTGTCTGTCCACTAAAGGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGACAGAACTCTGTCATCACTTGGCATGTGATTCCACATCAAACATACCAAGCCAAGATTATTCTACATaGGTTCAGCTGTCAGGGATC | + |
|
Preference number: 3 (lower is better) Translates to: QTELCHHLACDSTSNIPSQDYST*VQLSGI Trigger: GATCCCTGACAGCTGAACCAATGTAGAATAATCTTG...GCTTGGTATGTTTGATGTGGAATCACATGCCAAGTGATGACAGAGTTCTGTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| 3UTR CAA 72 bp | TCGCCTGGGGTACTGGGCGTGGGGGTGGCGGGCGCTTaGGAGGGACATCTCCAGCCAGCTCCGGCAAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPGVLGVGVAGA*EGHLQPAPAKL Trigger: GAGCTTTGCCGGAGCTGGCTGGAGATGTCCCTCCAAAGCGCCCGCCACCCCCACGCCCAGTACCCCAGGCGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000237240.2 |
||
| CDS-3UTR CCA 90 bp | TGGTCCTCCACTCCAGCCCGGGGCTCCAGGGTGACCTCTAGGACGTCCAACCATGGGGGCACAGGAGGCTaGGGCTGTCCTGGGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: WSSTPARGSRVTSRTSNHGGTGG*GCPGKP Trigger: GGGCTTCCCAGGACAGCCCCAGCCTCCTGTGCCCCC...ATGGTTGGACGTCCTAGAGGTCACCCTGGAGCCCCGGGCTGGAGTGGAGGACCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | GGGCAGAGTGGCACCAGAAGATGGGGTTCCTCCTTGACCCCCAGCACCTTGGCCAGGCCAGGCAGGCCCTaGAGGGTGGAAGCCATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQSGTRRWGSSLTPSTLARPGRP*RVEAIG Trigger: TCCTATGGCTTCCACCCTCCAGGGCCTGCCTGGCCT...GGCCAAGGTGCTGGGGGTCAAGGAGGAACCCCATCTTCTGGTGCCACTCTGCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
||
| 3UTR CAA 72 bp | AGGCAGGCCCTGGAGGGTGGAAGCCATAGGAAGGGGTaGTCCCAGGAGGGTATGGAGGTTGAGGGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RQALEGGSHRKG*SQEGMEVEGAQ Trigger: CTGTGCCCCCTCAACCTCCATACCCTCCTGGGACAACCCCTTCCTATGGCTTCCACCCTCCAGGGCCTGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000235921.2 ENSMUST00000237240.2 |
||
| CDS-3UTR CCA 90 bp | CTCATGCTGCACTCTTCAGGGCCTTTCAGGAGGCCTATGTGCTTCCAACTCGAGCTGGGGTACTGGGCGTaGGGGTGGCGGGCGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LMLHSSGPFRRPMCFQLELGYWA*GWRALW Trigger: CCAAAGCGCCCGCCACCCCCACGCCCAGTACCCCAG...CTCGAGTTGGAAGCACATAGGCCTCCTGAAAGGCCCTGAAGAGTGCAGCATGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | CCCACCAGAGGCTGGGTACCCAGGCAAGGGATGTTTCAAGGCACATACAATTTCCTGGGGTACTGGGCGTaGGGGTGGCGGGCGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTRGWVPRQGMFQGTYNFLGYWA*GWRALW Trigger: CCAAAGCGCCCGCCACCCCCACGCCCAGTACCCCAG...GAAATTGTATGTGCCTTGAAACATCCCTTGCCTGGGTACCCAGCCTCTGGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR GCA 90 bp | CTCCAGCCCACCCAGAGCCGGGGCTGCACTCACAGTCCCTACCCTTTACATTCTTCCAGCTTGGCTTTCTaGTCCTGGCACCGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LQPTQSRGCTHSPYPLHSSSLAF*SWHRST Trigger: TGTGGAGCGGTGCCAGGAGCAGAAAGCCAAGCTGGA...AGAATGTAAAGGGTAGGGACTGTGAGTGCAGCCCCGGCTCTGGGTGGGCTGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | GTAGTGATGATGTCTGGGAAGCACCATGGGGGTGTTCTGTCTGGTGTCTGTTCTCACAGGGAAGGGGGCTaGCTGCAGGGCTCCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VVMMSGKHHGGVLSGVCSHREGG*LQGSLG Trigger: GCCCAGGGAGCCCTGCAGCCAGCCCCCTTCCCTGTG...AGAACAGACACCAGACAGAACACCCCCATGGTGCTTCCCAGACATCATCACTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | GGCTGGGTACCCAGGCAAGGGATGTTTCAAGGCACATACAATTTCCTAACCCGTGGGGGCACAGGAGGCTaGGGCTGTCCTGGGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GWVPRQGMFQGTYNFLTRGGTGG*GCPGKP Trigger: GGGCTTCCCAGGACAGCCCCAGCCTCCTGTGCCCCC...ACGGGTTAGGAAATTGTATGTGCCTTGAAACATCCCTTGCCTGGGTACCCAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
||
| CDS-3UTR GCA 90 bp | GTCCCTGGCAGAAGGAGCTCCCAGAAGGACTCATGCTGCACTCTTCAGGGCCTTTGGAACTCCAGGTTCTaGTCTGCCAGGCTCCGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VPGRRSSQKDSCCTLQGLWNSRF*SARLRF Trigger: GAACCGGAGCCTGGCAGAGCAGAACCTGGAGTTCCA...AAGGCCCTGAAGAGTGCAGCATGAGTCCTTCTGGGAGCTCCTTCTGCCAGGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGGCCCTAGGAGTGAAAAGTGGCTGGGAGGTAACCCTGGTCCTCCACTCCAGCTTGGCTTTCTaGTCCTGGCACCGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: KWRALGVKSGWEVTLVLHSSLAF*SWHRST Trigger: TGTGGAGCGGTGCCAGGAGCAGAAAGCCAAGCTGGA...GTGGAGGACCAGGGTTACCTCCCAGCCACTTTTCACTCCTAGGGCCCTCCACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTCTGTCTGGTGTCTGTTCTGCGGGGACACTGGGAAAAGGAAGGAGATAAACACAGGGAAGGGGGCTaGCTGCAGGGCTCCCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFCLVSVLRGHWEKEGDKHREGG*LQGSLG Trigger: GCCCAGGGAGCCCTGCAGCCAGCCCCCTTCCCTGTG...TTTATCTCCTTCCTTTTCCCAGTGTCCCCGCAGAACAGACACCAGACAGAACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
||
| CDS-3UTR GCA 90 bp | CAGCCCACCCAGAGCCGGGGCTGCACTCACAGTCCCTACCCTTTACATTCTGAGGCTTCTGGGTCATTCTaGATTTCCTCCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QPTQSRGCTHSPYPLHSEASGSF*ISSSSC Trigger: GCAGGAGCTGGAGGAAATGCAGAATGACCCAGAAGC...CTCAGAATGTAAAGGGTAGGGACTGTGAGTGCAGCCCCGGCTCTGGGTGGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGGCCTGGGTTTCCCTTGGCATCCCCAGCTCTCTCACCATACCACTGCTGCGGTCCCAGGCTGCAGTaGCGAGGAAAATTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LRPGFPLASPALSPYHCCGPRLQ*RGKFLQ Trigger: CTGGAGAAATTTTCCTCGGCACTGCAGCCTGGGACC...GCAGCAGTGGTATGGTGAGAGAGCTGGGGATGCCAAGGGAAACCCAGGCCTCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR GCA 90 bp | TGGTCCTCCACTCCAGCCCGGGGCTCCAGGGTGACCTCTAGGACGTCCAACCATTTCATGCCTTCGATCTaGAGAAGGTCCAACAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: WSSTPARGSRVTSRTSNHFMPSI*RRSNKV Trigger: GACCTTGTTGGACCTTCTGCAGATCGAAGGCATGAA...ATGGTTGGACGTCCTAGAGGTCACCCTGGAGCCCCGGGCTGGAGTGGAGGACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | CCTGATTTACATCTGGACCAGCCACACAGATGCATCACCTGCTGCAACCCCTGTGCCCACAGGCAAGCCTaGGGATGGGCTGTAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PDLHLDQPHRCITCCNPCAHRQA*GWAVGQ Trigger: TTGCCCTACAGCCCATCCCCAGGCTTGCCTGTGGGC...ACAGGGGTTGCAGCAGGTGATGCATCTGTGTGGCTGGTCCAGATGTAAATCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
||
| CDS-3UTR TCA 90 bp | CAGCCCACCCAGAGCCGGGGCTGCACTCACAGTCCCTACCCTTTACATTCTGAGCTCCTGGTATTTGTCTaGGAGGTTAGAGCGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: QPTQSRGCTHSPYPLHSELLVFV*EVRAAD Trigger: ATCAGCCGCTCTAACCTCTCAGACAAATACCAGGAG...CTCAGAATGTAAAGGGTAGGGACTGTGAGTGCAGCCCCGGCTCTGGGTGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGGAGGGCCCTAGGAGTGAAAAGTGGCTGGGAGGTAACCCTGGTCCTCCACGCTTCTGGGTCATTCTaGATTTCCTCCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KWRALGVKSGWEVTLVLHASGSF*ISSSSC Trigger: GCAGGAGCTGGAGGAAATGCAGAATGACCCAGAAGC...GTGGAGGACCAGGGTTACCTCCCAGCCACTTTTCACTCCTAGGGCCCTCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| CDS-3UTR GCA 90 bp | GTAGTCACTTTCATTACTAAGCAGGCTCCAGCCCACCCAGAGCCGGGGCTGCACGCTTCTGGGTCATTCTaGATTTCCTCCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VVTFITKQAPAHPEPGLHASGSF*ISSSSC Trigger: GCAGGAGCTGGAGGAAATGCAGAATGACCCAGAAGC...GTGCAGCCCCGGCTCTGGGTGGGCTGGAGCCTGCTTAGTAATGAAAGTGACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| CDS-3UTR GCA 90 bp | GGAGTGGAGGGGTGGGTGAACCTCAGAAAGAGCCAGCCAGAAGTGGAGGGCCCTTTCATGCCTTCGATCTaGAGAAGGTCCAACAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GVEGWVNLRKSQPEVEGPFMPSI*RRSNKV Trigger: GACCTTGTTGGACCTTCTGCAGATCGAAGGCATGAA...AGGGCCCTCCACTTCTGGCTGGCTCTTTCTGAGGTTCACCCACCCCTCCACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | GTAGTCACTTTCATTACTAAGCAGGCTCCAGCCCACCCAGAGCCGGGGCTGCACCCGGGCAATGGCTTCTaGGTCATTCTGCATTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VVTFITKQAPAHPEPGLHPGNGF*VILHFL Trigger: GAGGAAATGCAGAATGACCCAGAAGCCATTGCCCGG...GTGCAGCCCCGGCTCTGGGTGGGCTGGAGCCTGCTTAGTAATGAAAGTGACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| CDS-3UTR TCA 90 bp | GAGCAGTCCCTGGCAGAAGGAGCTCCCAGAAGGACTCATGCTGCACTCTTCAGGCTCCTGGTATTTGTCTaGGAGGTTAGAGCGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EQSLAEGAPRRTHAALFRLLVFV*EVRAAD Trigger: ATCAGCCGCTCTAACCTCTCAGACAAATACCAGGAG...CCTGAAGAGTGCAGCATGAGTCCTTCTGGGAGCTCCTTCTGCCAGGGACTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR TCA 90 bp | GGTTCAGCTGTCAGGGATCAAGCGCAGGTAGCTATGCAAAGACATGAACACACCGGGAGGTTTGTTTCCTaGCGGGAGGTAGGGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: GSAVRDQAQVAMQRHEHTGRFVS*REVGGL Trigger: CAGTCCCCCTACCTCCCGTCAGGAAACAAACCTCCC...GGTGTGTTCATGTCTTTGCATAGCTACCTGCGCTTGATCCCTGACAGCTGAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
||
| CDS-3UTR TCA 90 bp | GGCTGGGTACCCAGGCAAGGGATGTTTCAAGGCACATACAATTTCCTAACCCGTGGGAGGTTTGTTTCCTaGCGGGAGGTAGGGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: GWVPRQGMFQGTYNFLTRGRFVS*REVGGL Trigger: CAGTCCCCCTACCTCCCGTCAGGAAACAAACCTCCC...ACGGGTTAGGAAATTGTATGTGCCTTGAAACATCCCTTGCCTGGGTACCCAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAGTCCCTGGCAGAAGGAGCTCCCAGAAGGACTCATGCTGCACTCTTCAGGATTTCCAGGGGACCTTaGAACTCCAGGTTCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: EQSLAEGAPRRTHAALFRISRGP*NSRFCS Trigger: AGAGCAGAACCTGGAGTTCCAAGGTCCCCTGGAAAT...CCTGAAGAGTGCAGCATGAGTCCTTCTGGGAGCTCCTTCTGCCAGGGACTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGCTGGGTACCCAGGCAAGGGATGTTTCAAGGCACATACAATTTCCTAACCGCCCACAGGCAAGCCTaGGGATGGGCTGTAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGWVPRQGMFQGTYNFLTAHRQA*GWAVGQ Trigger: TTGCCCTACAGCCCATCCCCAGGCTTGCCTGTGGGC...GGTTAGGAAATTGTATGTGCCTTGAAACATCCCTTGCCTGGGTACCCAGCCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | CCCACCAGAGGCTGGGTACCCAGGCAAGGGATGTTTCAAGGCACATACAATTTCAACCCACCATGGCCCTaGGTCCTGGATGAGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: PTRGWVPRQGMFQGTYNFNPPWP*VLDEVM Trigger: CATCACCTCATCCAGGACCCAGGGCCATGGTGGGTT...GAAATTGTATGTGCCTTGAAACATCCCTTGCCTGGGTACCCAGCCTCTGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTCCCAGCGTTTCAGGGCGCATCACCACCACGTCCAGTGTTAACCTCAAATAACCCACCATGGCCCTaGGTCCTGGATGAGGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: CVPAFQGASPPRPVLTSNNPPWP*VLDEVM Trigger: CATCACCTCATCCAGGACCCAGGGCCATGGTGGGTT...ATTTGAGGTTAACACTGGACGTGGTGGTGATGCGCCCTGAAACGCTGGGACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | ACGTCCAGTGTTAACCTCAAATCTCAGCAAATGGAGGCCAAAGGCTGTGGTGCAAGGCCAGGCAGGCCCTaGAGGGTGGAAGCCATAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TSSVNLKSQQMEAKGCGARPGRP*RVEAIG Trigger: TCCTATGGCTTCCACCCTCCAGGGCCTGCCTGGCCT...TGCACCACAGCCTTTGGCCTCCATTTGCTGAGATTTGAGGTTAACACTGGACGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
||
| CDS-3UTR GCA 90 bp | CTTTCATTACTAAGCAGGCTCCAGCCCACCCAGAGCCGGGGCTGCACTCACAGTTTCATGCCTTCGATCTaGAGAAGGTCCAACAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLLSRLQPTQSRGCTHSFMPSI*RRSNKV Trigger: GACCTTGTTGGACCTTCTGCAGATCGAAGGCATGAA...ACTGTGAGTGCAGCCCCGGCTCTGGGTGGGCTGGAGCCTGCTTAGTAATGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | AGAGGCTGGGTACCCAGGCAAGGGATGTTTCAAGGCACATACAATTTCCTAACCCCAGGCTCCGGTTCGTaGCCAGTGCCATCTCTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGWVPRQGMFQGTYNFLTPGSGS*PVPSLV Trigger: AACGAGAGATGGCACTGGCCACGAACCGGAGCCTGG...GGTTAGGAAATTGTATGTGCCTTGAAACATCCCTTGCCTGGGTACCCAGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTTCTGTGTGTCCCAGCGTTTCAGGGCGCATCACCACCACGTCCAGTGTTAAAAATTTCTCCAGCTTaGCTTTCTGCTCCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GLLCVPAFQGASPPRPVLKISPA*LSAPGT Trigger: GGTGCCAGGAGCAGAAAGCCAAGCTGGAGAAATTTT...TAACACTGGACGTGGTGGTGATGCGCCCTGAAACGCTGGGACACACAGAAGCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | GTGGTAAATAAGGTAGAGCATCCTTTAGTGGACAGACAGAACTCTGTCATCACTCTGGGGTACTGGGCGTaGGGGTGGCGGGCGCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VVNKVEHPLVDRQNSVITLGYWA*GWRALW Trigger: CCAAAGCGCCCGCCACCCCCACGCCCAGTACCCCAG...AGTGATGACAGAGTTCTGTCTGTCCACTAAAGGATGCTCTACCTTATTTACCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTCCCAGAAGGACTCATGCTGCACTCTTCAGGGCCTTTCAGGAGGCCTATGAAAATTTCTCCAGCTTaGCTTTCTGCTCCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: ELPEGLMLHSSGPFRRPMKISPA*LSAPGT Trigger: GGTGCCAGGAGCAGAAAGCCAAGCTGGAGAAATTTT...CATAGGCCTCCTGAAAGGCCCTGAAGAGTGCAGCATGAGTCCTTCTGGGAGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | AAATCTCAGCAAATGGAGGCCAAAGGCTGTGGTGCAGGTAGAAGGAAGAAGGTGAGGCAAGCCTGGGGATaGGCTGTAGGGCAAAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KSQQMEAKGCGAGRRKKVRQAWG*AVGQRV Trigger: TACCCTTTGCCCTACAGCCCATCCCCAGGCTTGCCT...CACCTTCTTCCTTCTACCTGCACCACAGCCTTTGGCCTCCATTTGCTGAGATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
||
| CDS-3UTR GCA 90 bp | TCAAATCTCAGCAAATGGAGGCCAAAGGCTGTGGTGCAGGTAGAAGGAAGAAGGGGTCCCAGGCTGCAGTaGCGAGGAAAATTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNLSKWRPKAVVQVEGRRGPRLQ*RGKFLQ Trigger: CTGGAGAAATTTTCCTCGGCACTGCAGCCTGGGACC...CCTTCTTCCTTCTACCTGCACCACAGCCTTTGGCCTCCATTTGCTGAGATTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR GCA 90 bp | GGCTGGGTACCCAGGCAAGGGATGTTTCAAGGCACATACAATTTCCTAACCCGTGGTCCCAGGCTGCAGTaGCGAGGAAAATTTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GWVPRQGMFQGTYNFLTRGPRLQ*RGKFLS Trigger: TGAGAGAAATTTTCCTCGGCACTGCAGCCTGGGACC...ACGGGTTAGGAAATTGTATGTGCCTTGAAACATCCCTTGCCTGGGTACCCAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237240.2 |
||
| CDS-3UTR TCA 90 bp | GTAGTGATGATGTCTGGGAAGCACCATGGGGGTGTTCTGTCTGGTGTCTGTTCTCTCCTGGTATTTGTCTaGGAGGTTAGAGCGGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VVMMSGKHHGGVLSGVCSLLVFV*EVRAAD Trigger: ATCAGCCGCTCTAACCTCTCAGACAAATACCAGGAG...AGAACAGACACCAGACAGAACACCCCCATGGTGCTTCCCAGACATCATCACTAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR GCA 90 bp | CCACGTCCAGTGTTAACCTCAAATCTCAGCAAATGGAGGCCAAAGGCTGTGGTGCCTCCTCGATCTTCATaGCTTCGATCTGCAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRPVLTSNLSKWRPKAVVPPRSS*LRSAEG Trigger: ACCTTCTGCAGATCGAAGGCATGAAGATCGAGGAGG...CACCACAGCCTTTGGCCTCCATTTGCTGAGATTTGAGGTTAACACTGGACGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR GCA 90 bp | CACCAGAGGCTGGGTACCCAGGCAAGGGATGTTTCAAGGCACATACAATTTCCTCCTCCTCGATCTTCATaGCTTCGATCTGCAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HQRLGTQARDVSRHIQFPPPRSS*LRSAEG Trigger: ACCTTCTGCAGATCGAAGGCATGAAGATCGAGGAGG...AGGAAATTGTATGTGCCTTGAAACATCCCTTGCCTGGGTACCCAGCCTCTGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | ACCACCACGTCCAGTGTTAACCTCAAATCTCAGCAAATGGAGGCCAAAGGCTGTCCGGGCAATGGCTTCTaGGTCATTCTGCATTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TTTSSVNLKSQQMEAKGCPGNGF*VILHFL Trigger: GAGGAAATGCAGAATGACCCAGAAGCCATTGCCCGG...ACAGCCTTTGGCCTCCATTTGCTGAGATTTGAGGTTAACACTGGACGTGGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| CDS-3UTR CCA 90 bp | TCTGTCTGGTGTCTGTTCTGCGGGGACACTGGGAAAAGGAAGGAGATAAACAAGCCGGGCAATGGCTTCTaGGTCATTCTGCATTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVWCLFCGDTGKRKEINKPGNGF*VILHFL Trigger: GAGGAAATGCAGAATGACCCAGAAGCCATTGCCCGG...CTTGTTTATCTCCTTCCTTTTCCCAGTGTCCCCGCAGAACAGACACCAGACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| CDS-3UTR CCA 90 bp | GCTATAAATAATTTAGGAGAAGCAAGCAGATGTGGTAATGCACCCGTGGCCGGTAGGCAAGCCTGGGGATaGGCTGTAGGGCAAAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AINNLGEASRCGNAPVAGRQAWG*AVGQRV Trigger: TACCCTTTGCCCTACAGCCCATCCCCAGGCTTGCCT...ACCGGCCACGGGTGCATTACCACATCTGCTTGCTTCTCCTAAATTATTTATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
||
| CDS-3UTR GCA 90 bp | ATTATTCTACATTGGTTCAGCTGTCAGGGATCAAGCGCAGGTAGCTATGCAAAGTCCAGCTTGGCTTTCTaGTCCTGGCACCGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: IILHWFSCQGSSAGSYAKSSLAF*SWHRST Trigger: TGTGGAGCGGTGCCAGGAGCAGAAAGCCAAGCTGGA...CTTTGCATAGCTACCTGCGCTTGATCCCTGACAGCTGAACCAATGTAGAATAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR GCA 90 bp | CGCATCACCACCACGTCCAGTGTTAACCTCAAATCTCAGCAAATGGAGGCCAAAAACAAGGTCCCAGGCTaGAGTGCCGAGGAAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: RITTTSSVNLKSQQMEAKNKVPG*SAEENF Trigger: GAAATTTTCCTCGGCACTGCAGCCTGGGACCTTGTT...TTTGGCCTCCATTTGCTGAGATTTGAGGTTAACACTGGACGTGGTGGTGATGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| CDS-3UTR GCA 90 bp | AACCTCAAATCTCAGCAAATGGAGGCCAAAGGCTGTGGTGCAGGTAGAAGGAAGAACAAGGTCCCAGGCTaGAGTGCCGAGGAAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: NLKSQQMEAKGCGAGRRKNKVPG*SAEENF Trigger: GAAATTTTCCTCGGCACTGCAGCCTGGGACCTTGTT...CTTCCTTCTACCTGCACCACAGCCTTTGGCCTCCATTTGCTGAGATTTGAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| CDS-3UTR GCA 90 bp | AACCTCAAATCTCAGCAAATGGAGGCCAAAGGCTGTGGTGCAGGTAGAAGGAAGCCTCCTCGATCTTCATaGCTTCGATCTGCAGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NLKSQQMEAKGCGAGRRKPPRSS*LRSAEG Trigger: ACCTTCTGCAGATCGAAGGCATGAAGATCGAGGAGG...CTTCCTTCTACCTGCACCACAGCCTTTGGCCTCCATTTGCTGAGATTTGAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | ATTGGTTCAGCTGTCAGGGATCAAGCGCAGGTAGCTATGCAAAGACATGAACACCCGGGCAATGGCTTCTaGGTCATTCTGCATTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IGSAVRDQAQVAMQRHEHPGNGF*VILHFL Trigger: GAGGAAATGCAGAATGACCCAGAAGCCATTGCCCGG...GTGTTCATGTCTTTGCATAGCTACCTGCGCTTGATCCCTGACAGCTGAACCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGAGGCTGGGTACCCAGGCAAGGGATGTTTCAAGGCACATACAATTTCCTAATTTCCAGGGGACCTTaGAACTCCAGGTTCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TRGWVPRQGMFQGTYNFLISRGP*NSRFCS Trigger: AGAGCAGAACCTGGAGTTCCAAGGTCCCCTGGAAAT...TAGGAAATTGTATGTGCCTTGAAACATCCCTTGCCTGGGTACCCAGCCTCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | CGCATCACCACCACGTCCAGTGTTAACCTCAAATCTCAGCAAATGGAGGCCAAAATTTCCAGGGGACCTTaGAACTCCAGGTTCTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RITTTSSVNLKSQQMEAKISRGP*NSRFCS Trigger: AGAGCAGAACCTGGAGTTCCAAGGTCCCCTGGAAAT...TTTGGCCTCCATTTGCTGAGATTTGAGGTTAACACTGGACGTGGTGGTGATGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR CCA 90 bp | GTAGTGATGATGTCTGGGAAGCACCATGGGGGTGTTCTGTCTGGTGTCTGTTCTGCAGCAGTGTCCTCATaGAGGAAAAGGACTCTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VVMMSGKHHGGVLSGVCSAAVSS*RKRTLR Trigger: TCTTAGAGTCCTTTTCCTCCATGAGGACACTGCTGC...AGAACAGACACCAGACAGAACACCCCCATGGTGCTTCCCAGACATCATCACTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
||
| CDS-3UTR GCA 90 bp | ACAAATGGGCAGTCATTATCCAGTTCAGCAGCAGTCTCACAGATGCCATTAGTGGCTTCTGGGTCATTCTaGATTTCCTCCAGCTCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TNGQSLSSSAAVSQMPLVASGSF*ISSSSC Trigger: GCAGGAGCTGGAGGAAATGCAGAATGACCCAGAAGC...CACTAATGGCATCTGTGAGACTGCTGCTGAACTGGATAATGACTGCCCATTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| CDS-3UTR GCA 90 bp | AGACAGAACTCTGTCATCACTTGGCATGTGATTCCACATCAAACATACCAAGCTGGTCCCAGGCTGCAGTaGCGAGGAAAATTTCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQNSVITWHVIPHQTYQAGPRLQ*RGKFLQ Trigger: CTGGAGAAATTTTCCTCGGCACTGCAGCCTGGGACC...AGCTTGGTATGTTTGATGTGGAATCACATGCCAAGTGATGACAGAGTTCTGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
||
| CDS-3UTR GCA 90 bp | GCTATAAATAATTTAGGAGAAGCAAGCAGATGTGGTAATGCACCCGTGGCCGGTAACAAGGTCCCAGGCTaGAGTGCCGAGGAAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: AINNLGEASRCGNAPVAGNKVPG*SAEENF Trigger: GAAATTTTCCTCGGCACTGCAGCCTGGGACCTTGTT...ACCGGCCACGGGTGCATTACCACATCTGCTTGCTTCTCCTAAATTATTTATAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| CDS-3UTR GCA 90 bp | GCATCAAGATTATTCTACATTGGTTCAGCTGTCAGGGATCAAGCGCAGGTAGCTAACAAGGTCCCAGGCTaGAGTGCCGAGGAAAATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ASRLFYIGSAVRDQAQVANKVPG*SAEENF Trigger: GAAATTTTCCTCGGCACTGCAGCCTGGGACCTTGTT...AGCTACCTGCGCTTGATCCCTGACAGCTGAACCAATGTAGAATAATCTTGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
||
| CDS-3UTR CCA 90 bp | AAATGGGCAGTCATTATCCAGTTCAGCAGCAGTCTCACAGATGCCATTAGTGATAAAATTTCTCCAGCTTaGCTTTCTGCTCCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KWAVIIQFSSSLTDAISDKISPA*LSAPGT Trigger: GGTGCCAGGAGCAGAAAGCCAAGCTGGAGAAATTTT...ATCACTAATGGCATCTGTGAGACTGCTGCTGAACTGGATAATGACTGCCCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
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| 3UTR CAA 72 bp | GCATCCTTTAGTGGACAGACAGAACTCTGTCATCACTaGGCATGTGATTCCACATCAAACATACCAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: ASFSGQTELCHH*ACDSTSNIPSS Trigger: GGAGCTTGGTATGTTTGATGTGGAATCACATGCCAAGTGATGACAGAGTTCTGTCTGTCCACTAAAGGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237240.2 |
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| CDS-3UTR CCA 90 bp | ATCAAGATTATTCTACATTGGTTCAGCTGTCAGGGATCAAGCGCAGGTAGCTATGCAGCAGTGTCCTCATaGAGGAAAAGGACTCTAAGA | + |
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Preference number: 4 (lower is better) Translates to: IKIILHWFSCQGSSAGSYAAVSS*RKRTLR Trigger: TCTTAGAGTCCTTTTCCTCCATGAGGACACTGCTGC...ATAGCTACCTGCGCTTGATCCCTGACAGCTGAACCAATGTAGAATAATCTTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
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| CDS TCA 90 bp | CTCCGGTTCGTGGCCAGTGCCATCTCTCGTTCTAACTGCAGGTCCTaGACCTCAGGAGACTCCAAGGCTAGCCGGGCAATGGCTTCTGGG | + |
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Preference number: 5 (lower is better) Translates to: LRFVASAISRSNCRS*TSGDSKASRAMASG Trigger: CCCAGAAGCCATTGCCCGGCTAGCCTTGGAGTCTCCTGAGGTTCAGGACCTGCAGTTAGAACGAGAGATGGCACTGGCCACGAACCGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237437.2 |
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| CDS TCA 90 bp | CTCCTGGCACCGCTCCACAAGCTTCCGCAGCTCCTGGTATTTGTCTaGGAGGTTAGAGCGGCTGATTTCCAGGGGACCTTGGAACTCCAG | + |
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Preference number: 5 (lower is better) Translates to: LLAPLHKLPQLLVFV*EVRAADFQGTLELQ Trigger: CTGGAGTTCCAAGGTCCCCTGGAAATCAGCCGCTCTAACCTCTCAGACAAATACCAGGAGCTGCGGAAGCTTGTGGAGCGGTGCCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237437.2 |
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| CDS-3UTR CAA 90 bp | GAAGAAGGTGGACACAGACCAGGACTAATACCTAGGCCAGGCAGGCCCTGGAGGGATTTCCAGGGGACCTaGGAACTCCAGGTTCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: EEGGHRPGLIPRPGRPWRDFQGT*ELQVLL Trigger: GAGCAGAACCTGGAGTTCCAAGGTCCCCTGGAAATC...CCTCCAGGGCCTGCCTGGCCTAGGTATTAGTCCTGGTCTGTGTCCACCTTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000235921.2 |
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| CDS GCA 90 bp | CATGCCTTCGATCTGCAGAAGGTCCAACAAGGTCCCAGGCTGCAGTaGCGAGGAAAATTTCTCTCAGGAGACTCCAAGGCTAGCCGGGCA | + |
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Preference number: 5 (lower is better) Translates to: HAFDLQKVQQGPRLQ*RGKFLSGDSKASRA Trigger: TGCCCGGCTAGCCTTGGAGTCTCCTGAGAGAAATTTTCCTCGGCACTGCAGCCTGGGACCTTGTTGGACCTTCTGCAGATCGAAGGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237240.2 |
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| CDS CCA 90 bp | TGGTATTTGTCTGAGAGGTTAGAGCGGCTGATTTCCAGGGGACCTTaGAACTCCAGGTTCTGCTCTGCCAGGCTCCGGTTCGTGGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: WYLSERLERLISRGP*NSRFCSARLRFVAS Trigger: ACTGGCCACGAACCGGAGCCTGGCAGAGCAGAACCTGGAGTTCCAAGGTCCCCTGGAAATCAGCCGCTCTAACCTCTCAGACAAATACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237437.2 |
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| CDS-3UTR CAA 90 bp | GTAGTCACTTTCATTACTAAGCAGGCTCCAGCCCACCCAGAGCCGGGGCTGCACGGAGCTGAGGTTGTGTaGGGTAGGGAGGTTTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: VVTFITKQAPAHPEPGLHGAEVV*GREVCF Trigger: GAAACAAACCTCCCTACCCAACACAACCTCAGCTCC...GTGCAGCCCCGGCTCTGGGTGGGCTGGAGCCTGCTTAGTAATGAAAGTGACTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
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| CDS-3UTR CAA 90 bp | AGAAGGACTCATGCTGCACTCTTCAGGGCCTTTCAGGAGGCCTATGTGCTTCCAGCCCGGGAGCTGAGGTaGTGTTGGGTAGGGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: RRTHAALFRAFQEAYVLPARELR*CWVGRF Trigger: AAACCTCCCTACCCAACACAACCTCAGCTCCCGGGC...TGGAAGCACATAGGCCTCCTGAAAGGCCCTGAAGAGTGCAGCATGAGTCCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
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| CDS GCA 90 bp | TCAGCCATGGCCTCAGACTCCTCCTCGATCTTCATGCCTTCGATCTaGAGAAGGTCCAACAAGGTCCCAGGCTGCAGTGCCGAGGAAAAT | + |
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Preference number: 5 (lower is better) Translates to: SAMASDSSSIFMPSI*RRSNKVPGCSAEEN Trigger: ATTTTCCTCGGCACTGCAGCCTGGGACCTTGTTGGACCTTCTGCAGATCGAAGGCATGAAGATCGAGGAGGAGTCTGAGGCCATGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
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| CDS GCA 90 bp | CCAGGAATTTCTCAGCCATGGCCTCAGACTCCTCCTCGATCTTCATaGCTTCGATCTGCAGAAGGTCCAACAAGGTCCCAGGCTGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: PGISQPWPQTPPRSS*LRSAEGPTRSQAAV Trigger: CACTGCAGCCTGGGACCTTGTTGGACCTTCTGCAGATCGAAGGCATGAAGATCGAGGAGGAGTCTGAGGCCATGGCTGAGAAATTCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
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| CDS-3UTR CAA 90 bp | TGTGTCCCAGCGTTTCAGGGCGCATCACCACCACGTCCAGTGTTAACCTCAAATCGCAGCTCCTGGTATTaGTCTGAGAGGTTAGAGCGG | + |
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Preference number: 5 (lower is better) Translates to: CVPAFQGASPPRPVLTSNRSSWY*SERLER Trigger: CCGCTCTAACCTCTCAGACAAATACCAGGAGCTGCG...ATTTGAGGTTAACACTGGACGTGGTGGTGATGCGCCCTGAAACGCTGGGACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
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| CDS-3UTR CAA 90 bp | GAGCTCCCAGAAGGACTCATGCTGCACTCTTCAGGGCCTTTCAGGAGGCCTATGGAAAATTTCTCCAGCTaGGCTTTCTGCTCCTGGCAC | + |
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Preference number: 5 (lower is better) Translates to: ELPEGLMLHSSGPFRRPMENFSS*AFCSWH Trigger: GTGCCAGGAGCAGAAAGCCAAGCTGGAGAAATTTTC...CATAGGCCTCCTGAAAGGCCCTGAAGAGTGCAGCATGAGTCCTTCTGGGAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
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| CDS GCA 90 bp | ATCTTCATGCCTTCGATCTGCAGAAGGTCCAACAAGGTCCCAGGCTaGAGTGCCGAGGAAAATTTCTCCAGCTTGGCTTTCTGCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: IFMPSICRRSNKVPG*SAEENFSSLAFCSW Trigger: CCAGGAGCAGAAAGCCAAGCTGGAGAAATTTTCCTCGGCACTGCAGCCTGGGACCTTGTTGGACCTTCTGCAGATCGAAGGCATGAAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
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| CDS-3UTR CAA 90 bp | CCTGATTTACATCTGGACCAGCCACACAGATGCATCACCTGCTGCAACCCCTGTGAAAATTTCTCCAGCTaGGCTTTCTGCTCCTGGCAC | + |
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Preference number: 5 (lower is better) Translates to: PDLHLDQPHRCITCCNPCENFSS*AFCSWH Trigger: GTGCCAGGAGCAGAAAGCCAAGCTGGAGAAATTTTC...ACAGGGGTTGCAGCAGGTGATGCATCTGTGTGGCTGGTCCAGATGTAAATCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
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| CDS-3UTR CAA 90 bp | TGTTCTGTCTGGTGTCTGTTCTGCGGGGACACTGGGAAAAGGAAGGAGATAAACGGAGCTGAGGTTGTGTaGGGTAGGGAGGTTTGTTTC | + |
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Preference number: 5 (lower is better) Translates to: CSVWCLFCGDTGKRKEINGAEVV*GREVCF Trigger: GAAACAAACCTCCCTACCCAACACAACCTCAGCTCC...GTTTATCTCCTTCCTTTTCCCAGTGTCCCCGCAGAACAGACACCAGACAGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
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| CDS-3UTR CAA 90 bp | ATCAAGATTATTCTACATTGGTTCAGCTGTCAGGGATCAAGCGCAGGTAGCTATGCCCGGGAGCTGAGGTaGTGTTGGGTAGGGAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: IKIILHWFSCQGSSAGSYARELR*CWVGRF Trigger: AAACCTCCCTACCCAACACAACCTCAGCTCCCGGGC...ATAGCTACCTGCGCTTGATCCCTGACAGCTGAACCAATGTAGAATAATCTTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
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| CDS-3UTR CAA 90 bp | ATTGGTTCAGCTGTCAGGGATCAAGCGCAGGTAGCTATGCAAAGACATGAACACGAAAATTTCTCCAGCTaGGCTTTCTGCTCCTGGCAC | + |
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Preference number: 5 (lower is better) Translates to: IGSAVRDQAQVAMQRHEHENFSS*AFCSWH Trigger: GTGCCAGGAGCAGAAAGCCAAGCTGGAGAAATTTTC...GTGTTCATGTCTTTGCATAGCTACCTGCGCTTGATCCCTGACAGCTGAACCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
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| CDS-3UTR CAA 90 bp | GTGGTAAATAAGGTAGAGCATCCTTTAGTGGACAGACAGAACTCTGTCATCACTGATTTCCAGGGGACCTaGGAACTCCAGGTTCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: VVNKVEHPLVDRQNSVITDFQGT*ELQVLL Trigger: GAGCAGAACCTGGAGTTCCAAGGTCCCCTGGAAATC...AGTGATGACAGAGTTCTGTCTGTCCACTAAAGGATGCTCTACCTTATTTACCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
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| CDS-3UTR CAA 90 bp | ATCAAGATTATTCTACATTGGTTCAGCTGTCAGGGATCAAGCGCAGGTAGCTATGATTTCCAGGGGACCTaGGAACTCCAGGTTCTGCTC | + |
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Preference number: 5 (lower is better) Translates to: IKIILHWFSCQGSSAGSYDFQGT*ELQVLL Trigger: GAGCAGAACCTGGAGTTCCAAGGTCCCCTGGAAATC...ATAGCTACCTGCGCTTGATCCCTGACAGCTGAACCAATGTAGAATAATCTTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
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| CDS-3UTR CAA 90 bp | GTGGTAAATAAGGTAGAGCATCCTTTAGTGGACAGACAGAACTCTGTCATCACTCGCAGCTCCTGGTATTaGTCTGAGAGGTTAGAGCGG | + |
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Preference number: 5 (lower is better) Translates to: VVNKVEHPLVDRQNSVITRSSWY*SERLER Trigger: CCGCTCTAACCTCTCAGACAAATACCAGGAGCTGCG...AGTGATGACAGAGTTCTGTCTGTCCACTAAAGGATGCTCTACCTTATTTACCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
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| CDS TCA 72 bp | GTGGCCAGTGCCATCTCTCGTTCTAACTGCAGGTCCTaGACCTCAGGAGACTCCAAGGCTAGCCGGGCAATG | + |
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Preference number: 6 (lower is better) Translates to: VASAISRSNCRS*TSGDSKASRAM Trigger: CATTGCCCGGCTAGCCTTGGAGTCTCCTGAGGTTCAGGACCTGCAGTTAGAACGAGAGATGGCACTGGCCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237437.2 |
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| CDS GCA 72 bp | TGCAGTGCCGAGGAAAATTTCTCCAGCTTGGCTTTCTaGTCCTGGCACCGCTCCACAAGCTTCCGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: CSAEENFSSLAF*SWHRSTSFRSS Trigger: GGAGCTGCGGAAGCTTGTGGAGCGGTGCCAGGAGCAGAAAGCCAAGCTGGAGAAATTTTCCTCGGCACTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237437.2 |
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| CDS GCA 72 bp | ACGTCCTGGAGCTTCTCTACGCGGACTCGACGCAGGTaGAGCAGTGTCCTCAGACTCCTCCTCGATCTTCAT | + |
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Preference number: 6 (lower is better) Translates to: TSWSFSTRTRRR*SSVLRLLLDLH Trigger: ATGAAGATCGAGGAGGAGTCTGAGGACACTGCTGCACCTGCGTCGAGTCCGCGTAGAGAAGCTCCAGGACGT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000235921.2 |
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| CDS CCA 72 bp | TCTGAGAGGTTAGAGCGGCTGATTTCCAGGGGACCTTaGAACTCCAGGTTCTGCTCTGCCAGGCTCCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: SERLERLISRGP*NSRFCSARLRF Trigger: GAACCGGAGCCTGGCAGAGCAGAACCTGGAGTTCCAAGGTCCCCTGGAAATCAGCCGCTCTAACCTCTCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237437.2 |
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| CDS TCA 72 bp | CCGCTCCACAAGCTTCCGCAGCTCCTGGTATTTGTCTaGGAGGTTAGAGCGGCTGATTTCCAGGGGACCTTG | + |
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Preference number: 6 (lower is better) Translates to: PLHKLPQLLVFV*EVRAADFQGTL Trigger: CAAGGTCCCCTGGAAATCAGCCGCTCTAACCTCTCAGACAAATACCAGGAGCTGCGGAAGCTTGTGGAGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237437.2 |
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| CDS CCA 72 bp | TGCTCCTGGCACCGCTCCACAAGCTTCCGCAGCTCCTaGTATTTGTCTGAGAGGTTAGAGCGGCTGATTTCC | + |
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Preference number: 6 (lower is better) Translates to: CSWHRSTSFRSS*YLSERLERLIS Trigger: GGAAATCAGCCGCTCTAACCTCTCAGACAAATACCAGGAGCTGCGGAAGCTTGTGGAGCGGTGCCAGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237437.2 |
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| CDS CAA 72 bp | TGGCACCGCTCCACAAGCTTCCGCAGCTCCTGGTATTaGTCTGAGAGGTTAGAGCGGCTGATTTCCAGGGGA | + |
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Preference number: 6 (lower is better) Translates to: WHRSTSFRSSWY*SERLERLISRG Trigger: TCCCCTGGAAATCAGCCGCTCTAACCTCTCAGACAAATACCAGGAGCTGCGGAAGCTTGTGGAGCGGTGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 ENSMUST00000237437.2 |
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| CDS GCA 72 bp | TCTCAGCCATGGCCTCAGACTCCTCCTCGATCTTCATaGCTTCGATCTGCAGAAGGTCCAACAAGGTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: SQPWPQTPPRSS*LRSAEGPTRSQ Trigger: CTGGGACCTTGTTGGACCTTCTGCAGATCGAAGGCATGAAGATCGAGGAGGAGTCTGAGGCCATGGCTGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087951.7 ENSMUST00000235927.2 |
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| CDS GCA 72 bp | GATCTGCAGAAGGTCCAACAAGGTCCCAGGCTGCAGTaGCGAGGAAAATTTCTCCAGCTTGGCTTTCTGCTC | + |
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Preference number: 6 (lower is better) Translates to: DLQKVQQGPRLQ*RGKFLQLGFLL Trigger: GAGCAGAAAGCCAAGCTGGAGAAATTTTCCTCGGCACTGCAGCCTGGGACCTTGTTGGACCTTCTGCAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
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| CDS GCA 72 bp | CCTTCGATCTGCAGAAGGTCCAACAAGGTCCCAGGCTaGAGTGCCGAGGAAAATTTCTCCAGCTTGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: PSICRRSNKVPG*SAEENFSSLAF Trigger: GAAAGCCAAGCTGGAGAAATTTTCCTCGGCACTGCAGCCTGGGACCTTGTTGGACCTTCTGCAGATCGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087951.7 ENSMUST00000235921.2 ENSMUST00000235927.2 |
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| CDS GCA 72 bp | GATCTGCAGAAGGTCCAACAAGGTCCCAGGCTGCAGTaGCGAGGAAAATTTCTCTCAGGAGACTCCAAGGCT | + |
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Preference number: 6 (lower is better) Translates to: DLQKVQQGPRLQ*RGKFLSGDSKA Trigger: AGCCTTGGAGTCTCCTGAGAGAAATTTTCCTCGGCACTGCAGCCTGGGACCTTGTTGGACCTTCTGCAGATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237240.2 |
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| CDS GCA 72 bp | CCTTCGATCTGCAGAAGGTCCAACAAGGTCCCAGGCTaGAGTGCCGAGGAAAATTTCTCTCAGGAGACTCCA | + |
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Preference number: 6 (lower is better) Translates to: PSICRRSNKVPG*SAEENFSQETP Trigger: TGGAGTCTCCTGAGAGAAATTTTCCTCGGCACTGCAGCCTGGGACCTTGTTGGACCTTCTGCAGATCGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000237240.2 |
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