Pregenerated sensors for VPS37B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066278Ensembl transcript IDs: ENSMUST00000040967.9
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCACCCAGCATGGCAGGAGTGGGAGGTTACTGGGCTGGCCTGCCCTaGACACTCGGTGAACAGCACAGCTGCCCAGCAGGGCCTGGCCGT | + |
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Preference number: 1 (lower is better) Translates to: APSMAGVGGYWAGLP*TLGEQHSCPAGPGR Trigger: ACGGCCAGGCCCTGCTGGGCAGCTGTGCTGTTCACCGAGTGTGCAGGGCAGGCCAGCCCAGTAACCTCCCACTCCTGCCATGCTGGGTGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR GCA 90 bp | GCCTGGCGGCCCCTTTACTGCATCCACCCGGAGCTCCCATGTGGCTaGGGCCCGAGACTGGCAGTGGGCGTTCCTGGTGGCAGAGGTACT | + |
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Preference number: 1 (lower is better) Translates to: AWRPLYCIHPELPCG*GPRLAVGVPGGRGT Trigger: AGTACCTCTGCCACCAGGAACGCCCACTGCCAGTCTCGGGCCGCAGCCACATGGGAGCTCCGGGTGGATGCAGTAAAGGGGCCGCCAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR TCA 90 bp | GGTGGGCACGCTGACCCAGGGCACCCAAGCCCTTGGCCCAGATGCTaGACCGCACAGCCTCTGTTTGCAGAGCTCGGCACGGCAGGCAGA | + |
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Preference number: 1 (lower is better) Translates to: GGHADPGHPSPWPRC*TAQPLFAELGTAGR Trigger: TCTGCCTGCCGTGCCGAGCTCTGCAAACAGAGGCTGTGCGGTTCAGCATCTGGGCCAAGGGCTTGGGTGCCCTGGGTCAGCGTGCCCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR TCA 90 bp | TCCCCAGCCGGGCCCTGGGAACTCTGCACATGTGGCACCTGCAGATaGCATCCCAGAGAGGAGGGAGCGGCCACTGCCAACCCTGTGGGG | + |
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Preference number: 1 (lower is better) Translates to: SPAGPWELCTCGTCR*HPREEGAATANPVG Trigger: CCCCACAGGGTTGGCAGTGGCCGCTCCCTCCTCTCTGGGATGTCATCTGCAGGTGCCACATGTGCAGAGTTCCCAGGGCCCGGCTGGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR GCA 90 bp | GGCTCACACTGGCCTCGCACCCCGGGCCACAGTTCGCCTGGCCTCTaGACACCTCACAGCAGCCAAGTGCAAACTCTGCCTGTGGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: GSHWPRTPGHSSPGL*TPHSSQVQTLPVAL Trigger: CAAAGCCACAGGCAGAGTTTGCACTTGGCTGCTGTGAGGTGTGCAGAGGCCAGGCGAACTGTGGCCCGGGGTGCGAGGCCAGTGTGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR CCA 90 bp | GCATCCACCCGGAGCTCCCATGTGGCTGCGGCCCGAGACTGGCAGTaGGCGTTCCTGGTGGCAGAGGTACTGAAGTGGCACATACAGCTT | + |
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Preference number: 1 (lower is better) Translates to: ASTRSSHVAAARDWQ*AFLVAEVLKWHIQL Trigger: AAGCTGTATGTGCCACTTCAGTACCTCTGCCACCAGGAACGCCCACTGCCAGTCTCGGGCCGCAGCCACATGGGAGCTCCGGGTGGATGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR GCA 90 bp | GCACCCAAGCCCTTGGCCCAGATGCTGAACCGCACAGCCTCTGTTTaGAGAGCTCGGCACGGCAGGCAGAGGATGTCTTGCAGGAAGAGC | + |
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Preference number: 1 (lower is better) Translates to: APKPLAQMLNRTASV*RARHGRQRMSCRKS Trigger: GCTCTTCCTGCAAGACATCCTCTGCCTGCCGTGCCGAGCTCTGCAAACAGAGGCTGTGCGGTTCAGCATCTGGGCCAAGGGCTTGGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR CCA 90 bp | AGCACCTGCAGCATTGCTCCTGAGATTATCCGGGGTGGAGGAAGATaGACCACTCCTGACCCATCACAAAGTGACGAGGCCCGCCAGGCC | + |
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Preference number: 1 (lower is better) Translates to: STCSIAPEIIRGGGR*TTPDPSQSDEARQA Trigger: GGCCTGGCGGGCCTCGTCACTTTGTGATGGGTCAGGAGTGGTCCATCTTCCTCCACCCCGGATAATCTCAGGAGCAATGCTGCAGGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR TCA 90 bp | ACCTCACAGCAGCCAAGTGCAAACTCTGCCTGTGGCTTTGAACCATaGGAGCACCCAGCATGGCAGGAGTGGGAGGTTACTGGGCTGGCC | + |
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Preference number: 1 (lower is better) Translates to: TSQQPSANSACGFEP*EHPAWQEWEVTGLA Trigger: GGCCAGCCCAGTAACCTCCCACTCCTGCCATGCTGGGTGCTCTCATGGTTCAAAGCCACAGGCAGAGTTTGCACTTGGCTGCTGTGAGGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR TCA 90 bp | CGCTGCCTTGACTGTGTTACCTTGGGCTGTAGCCAGCTGGCAGGGTaGAGGTGGGGTTCTAAGTTCTACCAACAGGCTCGCAGCCCTCTT | + |
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Preference number: 1 (lower is better) Translates to: RCLDCVTLGCSQLAG*RWGSKFYQQARSPL Trigger: AAGAGGGCTGCGAGCCTGTTGGTAGAACTTAGAACCCCACCTTCACCCTGCCAGCTGGCTACAGCCCAAGGTAACACAGTCAAGGCAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR CCA 90 bp | GCTGGGGCAGGCTCACTAATCAGCGCTGCCTTGACTGTGTTACCTTaGGCTGTAGCCAGCTGGCAGGGTGAAGGTGGGGTTCTAAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: AGAGSLISAALTVLP*AVASWQGEGGVLSS Trigger: AGAACTTAGAACCCCACCTTCACCCTGCCAGCTGGCTACAGCCCAAGGTAACACAGTCAAGGCAGCGCTGATTAGTGAGCCTGCCCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR TCA 90 bp | TCTTACTTACCACGGACCTACAGTTCTAAAATCAGGTGGGCACGCTaGCCCAGGGCACCCAAGCCCTTGGCCCAGATGCTGAACCGCACA | + |
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Preference number: 1 (lower is better) Translates to: SYLPRTYSSKIRWAR*PRAPKPLAQMLNRT Trigger: TGTGCGGTTCAGCATCTGGGCCAAGGGCTTGGGTGCCCTGGGTCAGCGTGCCCACCTGATTTTAGAACTGTAGGTCCGTGGTAAGTAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR TCA 90 bp | TCTGCACACCTCACAGCAGCCAAGTGCAAACTCTGCCTGTGGCTTTaGACCATGAGAGCACCCAGCATGGCAGGAGTGGGAGGTTACTGG | + |
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Preference number: 1 (lower is better) Translates to: SAHLTAAKCKLCLWL*TMRAPSMAGVGGYW Trigger: CCAGTAACCTCCCACTCCTGCCATGCTGGGTGCTCTCATGGTTCAAAGCCACAGGCAGAGTTTGCACTTGGCTGCTGTGAGGTGTGCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR TCA 90 bp | AAGTCCATCAGCCCGAGACACTCAGAAATCACACCCAACACAGATTaGGGTGATGCAGACTGGCCTGGCACAAACAGCGCTCCCTTGGTG | + |
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Preference number: 1 (lower is better) Translates to: KSISPRHSEITPNTD*GDADWPGTNSAPLV Trigger: CACCAAGGGAGCGCTGTTTGTGCCAGGCCAGTCTGCATCACCTCAATCTGTGTTGGGTGTGATTTCTGAGTGTCTCGGGCTGATGGACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR GCA 90 bp | GCAGACTGGCCTGGCACAAACAGCGCTCCCTTGGTGCACAGAACCTaGTCTCTTACTTACCACGGACCTACAGTTCTAAAATCAGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: ADWPGTNSAPLVHRT*SLTYHGPTVLKSGG Trigger: CCCACCTGATTTTAGAACTGTAGGTCCGTGGTAAGTAAGAGAGCAGGTTCTGTGCACCAAGGGAGCGCTGTTTGTGCCAGGCCAGTCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR TCA 90 bp | ACTGCATCCACCCGGAGCTCCCATGTGGCTGCGGCCCGAGACTGGCAGTGGGCGGTGTGTGGGGAGGGCTaGGGGCTCACACTGGCCTCG | + |
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Preference number: 2 (lower is better) Translates to: TASTRSSHVAAARDWQWAVCGEG*GLTLAS Trigger: CGAGGCCAGTGTGAGCCCTCAGCCCTCCCCACACAC...CGCCCACTGCCAGTCTCGGGCCGCAGCCACATGGGAGCTCCGGGTGGATGCAGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR GCA 90 bp | GCCAGCTATGGCCTGGCAAGGTCAGCCTGGCGGCCCCTTTACTGCATCCACCCGGAACAGGTGTGGGGCTaGCCCTCCCCAGCCGGGCCC | + |
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Preference number: 2 (lower is better) Translates to: ASYGLARSAWRPLYCIHPEQVWG*PSPAGP Trigger: GGGCCCGGCTGGGGAGGGGCAGCCCCACACCTGTTC...CGGGTGGATGCAGTAAAGGGGCCGCCAGGCTGACCTTGCCAGGCCATAGCTGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR GCA 90 bp | GGCACGCCGCGGGCTCCGAGTCCTGGCACCAGTGAAGCTAAGGCACAGCACGGGTGGGCTGGCCTGCCCTaGACACTCGGTGAACAGCAC | + |
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Preference number: 2 (lower is better) Translates to: GTPRAPSPGTSEAKAQHGWAGLP*TLGEQH Trigger: GTGCTGTTCACCGAGTGTGCAGGGCAGGCCAGCCCA...CCCGTGCTGTGCCTTAGCTTCACTGGTGCCAGGACTCGGAGCCCGCGGCGTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR GCA 90 bp | CACCCGGAGCTCCCATGTGGCTGCGGCCCGAGACTGGCAGTGGGCGTTCCTGGTCCCAAACCCCTCCCATaGCTACGCCAGCACCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: HPELPCGCGPRLAVGVPGPKPLP*LRQHLQ Trigger: CTGCAGGTGCTGGCGTAGGCATGGGAGGGGTTTGGG...ACCAGGAACGCCCACTGCCAGTCTCGGGCCGCAGCCACATGGGAGCTCCGGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR CCA 90 bp | CACCCGGAGCTCCCATGTGGCTGCGGCCCGAGACTGGCAGTGGGCGTTCCTGGTCCAGCATGGCAGGAGTaGGAGGTTACTGGGCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: HPELPCGCGPRLAVGVPGPAWQE*EVTGLA Trigger: GGCCAGCCCAGTAACCTCCCACTCCTGCCATGCTGG...ACCAGGAACGCCCACTGCCAGTCTCGGGCCGCAGCCACATGGGAGCTCCGGGTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR CCA 90 bp | GCCAGCTATGGCCTGGCAAGGTCAGCCTGGCGGCCCCTTTACTGCATCCACCCGCTGCCCAGCAGGGCCTaGCCGTGGGCACACATTCCA | + |
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Preference number: 2 (lower is better) Translates to: ASYGLARSAWRPLYCIHPLPSRA*PWAHIP Trigger: TGGAATGTGTGCCCACGGCCAGGCCCTGCTGGGCAG...CGGGTGGATGCAGTAAAGGGGCCGCCAGGCTGACCTTGCCAGGCCATAGCTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR TCA 90 bp | ACTGCATCCACCCGGAGCTCCCATGTGGCTGCGGCCCGAGACTGGCAGTGGGCGAGCCAGCTGGCAGGGTaGAGGTGGGGTTCTAAGTTC | + |
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Preference number: 2 (lower is better) Translates to: TASTRSSHVAAARDWQWASQLAG*RWGSKF Trigger: GAACTTAGAACCCCACCTTCACCCTGCCAGCTGGCT...CGCCCACTGCCAGTCTCGGGCCGCAGCCACATGGGAGCTCCGGGTGGATGCAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGCTATGGCCTGGCAAGGTCAGCCTGGCGGCCCCTTTACTGCATCCACCCTTCTGGGAACAGGTGTaGGGCTGCCCCTCCCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: CQLWPGKVSLAAPLLHPPFWEQV*GCPSPA Trigger: GGCTGGGGAGGGGCAGCCCCACACCTGTTCCCAGAA...GGGTGGATGCAGTAAAGGGGCCGCCAGGCTGACCTTGCCAGGCCATAGCTGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR TCA 90 bp | GCCGGTGGCCCAGCTGGGGCAGGCTCACTAATCAGCGCTGCCTTGACTGTGTTAGCCCTGCACACTCGGTaGACAGCACAGCTGCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: AGGPAGAGSLISAALTVLALHTR*TAQLPS Trigger: GCTGGGCAGCTGTGCTGTTCACCGAGTGTGCAGGGC...TAACACAGTCAAGGCAGCGCTGATTAGTGAGCCTGCCCCAGCTGGGCCACCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGCTATGGCCTGGCAAGGTCAGCCTGGCGGCCCCTTTACTGCATCCACCCGGGCCACAGTTCGCCTaGCCTCTGCACACCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: CQLWPGKVSLAAPLLHPPGPQFA*PLHTSQ Trigger: CTGTGAGGTGTGCAGAGGCCAGGCGAACTGTGGCCC...GGGTGGATGCAGTAAAGGGGCCGCCAGGCTGACCTTGCCAGGCCATAGCTGGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR CAA 90 bp | CCTGCCGGTGGCCCAGCTGGGGCAGGCTCACTAATCAGCGCTGCCTaGACTGTGTTACCTTGGGCTGTAGCCAGCTGGCAGGGTGAAGGT | + |
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Preference number: 2 (lower is better) Translates to: PAGGPAGAGSLISAA*TVLPWAVASWQGEG Trigger: ACCTTCACCCTGCCAGCTGGCTACAGCCCAAGGTAACACAGTCAAGGCAGCGCTGATTAGTGAGCCTGCCCCAGCTGGGCCACCGGCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCTGGGGCAGGCTCACTAATCAGCGCTGCCTTGACTGTGTTACCTTGGGCAACCGTGACGCGGCTTaGGGTGTGTGGGGAGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: PSWGRLTNQRCLDCVTLGNRDAA*GVWGGL Trigger: CAGCCCTCCCCACACACCTCAAGCCGCGTCACGGTT...GCCCAAGGTAACACAGTCAAGGCAGCGCTGATTAGTGAGCCTGCCCCAGCTGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR GCA 90 bp | GCCAGCTATGGCCTGGCAAGGTCAGCCTGGCGGCCCCTTTACTGCATCCACCCGAGGCAGAGGATGTCTTaGAGGAAGAGCAGGCACCCG | + |
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Preference number: 2 (lower is better) Translates to: ASYGLARSAWRPLYCIHPRQRMS*RKSRHP Trigger: CGGGTGCCTGCTCTTCCTGCAAGACATCCTCTGCCT...CGGGTGGATGCAGTAAAGGGGCCGCCAGGCTGACCTTGCCAGGCCATAGCTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGCTATGGCCTGGCAAGGTCAGCCTGGCGGCCCCTTTACTGCATCCACCCTGGGCTGTAGCCAGCTaGCAGGGTGAAGGTGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: CQLWPGKVSLAAPLLHPPWAVAS*QGEGGV Trigger: AACCCCACCTTCACCCTGCCAGCTGGCTACAGCCCA...GGGTGGATGCAGTAAAGGGGCCGCCAGGCTGACCTTGCCAGGCCATAGCTGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR CCA 90 bp | CACCCGGAGCTCCCATGTGGCTGCGGCCCGAGACTGGCAGTGGGCGTTCCTGGTTTGACTGTGTTACCTTaGGCTGTAGCCAGCTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: HPELPCGCGPRLAVGVPGLTVLP*AVASWQ Trigger: CTGCCAGCTGGCTACAGCCCAAGGTAACACAGTCAA...ACCAGGAACGCCCACTGCCAGTCTCGGGCCGCAGCCACATGGGAGCTCCGGGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR CAA 90 bp | GGCACCCAAGCCCTTGGCCCAGATGCTGAACCGCACAGCCTCTGTTaGCAGAGCTCGGCACGGCAGGCAGAGGATGTCTTGCAGGAAGAG | + |
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Preference number: 2 (lower is better) Translates to: GTQALGPDAEPHSLC*QSSARQAEDVLQEE Trigger: CTCTTCCTGCAAGACATCCTCTGCCTGCCGTGCCGAGCTCTGCAAACAGAGGCTGTGCGGTTCAGCATCTGGGCCAAGGGCTTGGGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR GCA 90 bp | GATGACATCCCAGAGAGGAGGGAGCGGCCACTGCCAACCCTGTGGGGCGGGCTGCTCACAGCAGCCAAGTaGAAACTCTGCCTGTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: DDIPERRERPLPTLWGGLLTAAK*KLCLWL Trigger: AAGCCACAGGCAGAGTTTGCACTTGGCTGCTGTGAG...CAGCCCGCCCCACAGGGTTGGCAGTGGCCGCTCCCTCCTCTCTGGGATGTCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR TCA 90 bp | CCCAGCTGGGGCAGGCTCACTAATCAGCGCTGCCTTGACTGTGTTACCTTGGGCCCTTGGCCCAGATGCTaGACCGCACAGCCTCTGTTT | + |
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Preference number: 2 (lower is better) Translates to: PSWGRLTNQRCLDCVTLGPWPRC*TAQPLF Trigger: AAACAGAGGCTGTGCGGTTCAGCATCTGGGCCAAGG...GCCCAAGGTAACACAGTCAAGGCAGCGCTGATTAGTGAGCCTGCCCCAGCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR CAA 90 bp | CTCTGCACACCTCACAGCAGCCAAGTGCAAACTCTGCCTGTGGCTTaGAACCATGAGAGCACCCAGCATGGCAGGAGTGGGAGGTTACTG | + |
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Preference number: 2 (lower is better) Translates to: LCTPHSSQVQTLPVA*NHESTQHGRSGRLL Trigger: CAGTAACCTCCCACTCCTGCCATGCTGGGTGCTCTCATGGTTCAAAGCCACAGGCAGAGTTTGCACTTGGCTGCTGTGAGGTGTGCAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGTAGCCAGCTGGCAGGGTGAAGGTGGGGTTCTAAGTTCTACCAACAGGCTCGCCTACGCCAGCACCTaGAGCATTGCTCCTGAGATT | + |
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Preference number: 2 (lower is better) Translates to: AVASWQGEGGVLSSTNRLAYAST*SIAPEI Trigger: AATCTCAGGAGCAATGCTGCAGGTGCTGGCGTAGGC...GAGCCTGTTGGTAGAACTTAGAACCCCACCTTCACCCTGCCAGCTGGCTACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGTAGCCAGCTGGCAGGGTGAAGGTGGGGTTCTAAGTTCTACCAACAGGCTCCAAACAGCGCTCCCTTaGTGCACAGAACCTGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: AVASWQGEGGVLSSTNRLQTALP*CTEPAL Trigger: GAGAGCAGGTTCTGTGCACCAAGGGAGCGCTGTTTG...GAGCCTGTTGGTAGAACTTAGAACCCCACCTTCACCCTGCCAGCTGGCTACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGTCAGCCTGGCGGCCCCTTTACTGCATCCACCCGGAGCTCCCATGTGGCTGCAGAGTCCAAATCCATaGAGAGGAAAACAGTCCAAC | + |
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Preference number: 2 (lower is better) Translates to: KVSLAAPLLHPPGAPMWLQSPNP*RGKQSN Trigger: GTTGGACTGTTTTCCTCTCCATGGATTTGGACTCTG...CAGCCACATGGGAGCTCCGGGTGGATGCAGTAAAGGGGCCGCCAGGCTGACCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR GCA 90 bp | CCCAGCTGGGGCAGGCTCACTAATCAGCGCTGCCTTGACTGTGTTACCTTGGGCGGTAATCTTTCCAAATaGACAAGTCCATCAGCCCGA | + |
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Preference number: 2 (lower is better) Translates to: PSWGRLTNQRCLDCVTLGGNLSK*TSPSAR Trigger: TCGGGCTGATGGACTTGTGCATTTGGAAAGATTACC...GCCCAAGGTAACACAGTCAAGGCAGCGCTGATTAGTGAGCCTGCCCCAGCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR CCA 72 bp | GGCTTGAGGTGTGTGGGGAGGGCTGAGGGCTCACACTaGCCTCGCACCCCGGGCCACAGTTCGCCTGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: GLRCVGRAEGSH*PRTPGHSSPGL Trigger: GAGGCCAGGCGAACTGTGGCCCGGGGTGCGAGGCCAGTGTGAGCCCTCAGCCCTCCCCACACACCTCAAGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR GCA 72 bp | AGGCTCGCAGCCCTCTTCTGGGAACAGGTGTGGGGCTaGCCCTCCCCAGCCGGGCCCTGGGAACTCTGCACA | + |
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Preference number: 3 (lower is better) Translates to: RLAALFWEQVWG*PSPAGPWELCT Trigger: TGTGCAGAGTTCCCAGGGCCCGGCTGGGGAGGGGCAGCCCCACACCTGTTCCCAGAAGAGGGCTGCGAGCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR CCA 72 bp | GCGGCCCCTTTACTGCATCCACCCGGAGCTCCCATGTaGCTGCGGCCCGAGACTGGCAGTGGGCGTTCCTGG | + |
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Preference number: 3 (lower is better) Translates to: AAPLLHPPGAPM*LRPETGSGRSW Trigger: CCAGGAACGCCCACTGCCAGTCTCGGGCCGCAGCCACATGGGAGCTCCGGGTGGATGCAGTAAAGGGGCCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR GCA 72 bp | CCCCTTTACTGCATCCACCCGGAGCTCCCATGTGGCTaGGGCCCGAGACTGGCAGTGGGCGTTCCTGGTGGC | + |
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Preference number: 3 (lower is better) Translates to: PLYCIHPELPCG*GPRLAVGVPGG Trigger: GCCACCAGGAACGCCCACTGCCAGTCTCGGGCCGCAGCCACATGGGAGCTCCGGGTGGATGCAGTAAAGGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR CCA 72 bp | ATCCCAGAGAGGAGGGAGCGGCCACTGCCAACCCTGTaGGGCGGGCTGTCCCCAAACCCCTCCCATGCCTAC | + |
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Preference number: 3 (lower is better) Translates to: IPERRERPLPTL*GGLSPNPSHAY Trigger: GTAGGCATGGGAGGGGTTTGGGGACAGCCCGCCCCACAGGGTTGGCAGTGGCCGCTCCCTCCTCTCTGGGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR-3UTR CAA 90 bp | GGCAAGGTCAGCCTGGCGGCCCCTTTACTGCATCCACCCGGAGCTCCCATGTGGCCGCACAGCCTCTGTTaGCAGAGCTCGGCACGGCAG | + |
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Preference number: 3 (lower is better) Translates to: GKVSLAAPLLHPPGAPMWPHSLC*QSSARQ Trigger: CTGCCGTGCCGAGCTCTGCAAACAGAGGCTGTGCGG...CCACATGGGAGCTCCGGGTGGATGCAGTAAAGGGGCCGCCAGGCTGACCTTGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR CCA 72 bp | CGGAGCTCCCATGTGGCTGCGGCCCGAGACTGGCAGTaGGCGTTCCTGGTGGCAGAGGTACTGAAGTGGCAC | + |
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Preference number: 3 (lower is better) Translates to: RSSHVAAARDWQ*AFLVAEVLKWH Trigger: GTGCCACTTCAGTACCTCTGCCACCAGGAACGCCCACTGCCAGTCTCGGGCCGCAGCCACATGGGAGCTCCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR CCA 72 bp | AGCCCCAGTGCCAGCTATGGCCTGGCAAGGTCAGCCTaGCGGCCCCTTTACTGCATCCACCCGGAGCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: SPSASYGLARSA*RPLYCIHPELP Trigger: TGGGAGCTCCGGGTGGATGCAGTAAAGGGGCCGCCAGGCTGACCTTGCCAGGCCATAGCTGGCACTGGGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR TCA 72 bp | GCTGACCCAGGGCACCCAAGCCCTTGGCCCAGATGCTaGACCGCACAGCCTCTGTTTGCAGAGCTCGGCACG | + |
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Preference number: 3 (lower is better) Translates to: ADPGHPSPWPRC*TAQPLFAELGT Trigger: CGTGCCGAGCTCTGCAAACAGAGGCTGTGCGGTTCAGCATCTGGGCCAAGGGCTTGGGTGCCCTGGGTCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| 3UTR GCA 72 bp | ATGGCAGGAGTGGGAGGTTACTGGGCTGGCCTGCCCTaGACACTCGGTGAACAGCACAGCTGCCCAGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: MAGVGGYWAGLP*TLGEQHSCPAG Trigger: CCCTGCTGGGCAGCTGTGCTGTTCACCGAGTGTGCAGGGCAGGCCAGCCCAGTAACCTCCCACTCCTGCCAT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR GCA 72 bp | CCAGCATGGCAGGAGTGGGAGGTTACTGGGCTGGCCTaGCCTGCACACTCGGTGAACAGCACAGCTGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PAWQEWEVTGLA*PAHSVNSTAAQ Trigger: CTGGGCAGCTGTGCTGTTCACCGAGTGTGCAGGGCAGGCCAGCCCAGTAACCTCCCACTCCTGCCATGCTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR GCA 72 bp | CCCTTGGCCCAGATGCTGAACCGCACAGCCTCTGTTTaGAGAGCTCGGCACGGCAGGCAGAGGATGTCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PLAQMLNRTASV*RARHGRQRMSC Trigger: GCAAGACATCCTCTGCCTGCCGTGCCGAGCTCTGCAAACAGAGGCTGTGCGGTTCAGCATCTGGGCCAAGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR GCA 72 bp | CGGTGGCCCAGCTGGGGCAGGCTCACTAATCAGCGCTaGCTTGACTGTGTTACCTTGGGCTGTAGCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RWPSWGRLTNQR*LDCVTLGCSQL Trigger: CAGCTGGCTACAGCCCAAGGTAACACAGTCAAGGCAGCGCTGATTAGTGAGCCTGCCCCAGCTGGGCCACCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR CCA 72 bp | ATGAGAGCACCCAGCATGGCAGGAGTGGGAGGTTACTaGGCTGGCCTGCCCTGCACACTCGGTGAACAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: MRAPSMAGVGGY*AGLPCTLGEQH Trigger: GTGCTGTTCACCGAGTGTGCAGGGCAGGCCAGCCCAGTAACCTCCCACTCCTGCCATGCTGGGTGCTCTCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR TCA 72 bp | CCACGGACCTACAGTTCTAAAATCAGGTGGGCACGCTaGCCCAGGGCACCCAAGCCCTTGGCCCAGATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PRTYSSKIRWAR*PRAPKPLAQML Trigger: CAGCATCTGGGCCAAGGGCTTGGGTGCCCTGGGTCAGCGTGCCCACCTGATTTTAGAACTGTAGGTCCGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR TCA 72 bp | AGTGAAGCTAAGGCACAGCACGGGCACTGGCAGATGTaGCCGTGCACTGCTTGCCCGACAGGAAGCGGCACT | + |
|
Preference number: 3 (lower is better) Translates to: SEAKAQHGHWQM*PCTACPTGSGT Trigger: AGTGCCGCTTCCTGTCGGGCAAGCAGTGCACGGTCACATCTGCCAGTGCCCGTGCTGTGCCTTAGCTTCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR CCA 72 bp | TTCTACAGCTTTACAGCCCCAGTGCCAGCTATGGCCTaGCAAGGTCAGCCTGGCGGCCCCTTTACTGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: FYSFTAPVPAMA*QGQPGGPFTAS Trigger: GGATGCAGTAAAGGGGCCGCCAGGCTGACCTTGCCAGGCCATAGCTGGCACTGGGGCTGTAAAGCTGTAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR CCA 72 bp | GGCTCACTAATCAGCGCTGCCTTGACTGTGTTACCTTaGGCTGTAGCCAGCTGGCAGGGTGAAGGTGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GSLISAALTVLP*AVASWQGEGGV Trigger: AACCCCACCTTCACCCTGCCAGCTGGCTACAGCCCAAGGTAACACAGTCAAGGCAGCGCTGATTAGTGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR TCA 72 bp | GACTGTGTTACCTTGGGCTGTAGCCAGCTGGCAGGGTaGAGGTGGGGTTCTAAGTTCTACCAACAGGCTCGC | + |
|
Preference number: 3 (lower is better) Translates to: DCVTLGCSQLAG*RWGSKFYQQAR Trigger: GCGAGCCTGTTGGTAGAACTTAGAACCCCACCTTCACCCTGCCAGCTGGCTACAGCCCAAGGTAACACAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR CCA 72 bp | GTGATGCAGACTGGCCTGGCACAAACAGCGCTCCCTTaGTGCACAGAACCTGCTCTCTTACTTACCACGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VMQTGLAQTALP*CTEPALLLTTD Trigger: GTCCGTGGTAAGTAAGAGAGCAGGTTCTGTGCACCAAGGGAGCGCTGTTTGTGCCAGGCCAGTCTGCATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR CCA 72 bp | AGAGTCCAAATCCATGGAGAGGAAAACAGTCCAACTTaGGGACAAAGGCTGATGGCCCTGCCGGTGGCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RVQIHGEENSPT*GQRLMALPVAQ Trigger: CTGGGCCACCGGCAGGGCCATCAGCCTTTGTCCCCAAGTTGGACTGTTTTCCTCTCCATGGATTTGGACTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR GCA 72 bp | ATGCAGACTGGCCTGGCACAAACAGCGCTCCCTTGGTaGACAGAACCTGCTCTCTTACTTACCACGGACCTA | + |
|
Preference number: 3 (lower is better) Translates to: MQTGLAQTALPW*TEPALLLTTDL Trigger: TAGGTCCGTGGTAAGTAAGAGAGCAGGTTCTGTGCACCAAGGGAGCGCTGTTTGTGCCAGGCCAGTCTGCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR CCA 72 bp | AGCATTGCTCCTGAGATTATCCGGGGTGGAGGAAGATaGACCACTCCTGACCCATCACAAAGTGACGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SIAPEIIRGGGR*TTPDPSQSDEA Trigger: GGCCTCGTCACTTTGTGATGGGTCAGGAGTGGTCCATCTTCCTCCACCCCGGATAATCTCAGGAGCAATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR CCA 72 bp | GCTGCCTTGACTGTGTTACCTTGGGCTGTAGCCAGCTaGCAGGGTGAAGGTGGGGTTCTAAGTTCTACCAAC | + |
|
Preference number: 3 (lower is better) Translates to: AALTVLPWAVAS*QGEGGVLSSTN Trigger: GTTGGTAGAACTTAGAACCCCACCTTCACCCTGCCAGCTGGCTACAGCCCAAGGTAACACAGTCAAGGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR TCA 72 bp | AGCCCGAGACACTCAGAAATCACACCCAACACAGATTaGGGTGATGCAGACTGGCCTGGCACAAACAGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: SPRHSEITPNTD*GDADWPGTNSA Trigger: AGCGCTGTTTGTGCCAGGCCAGTCTGCATCACCTCAATCTGTGTTGGGTGTGATTTCTGAGTGTCTCGGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR TCA 72 bp | GAGACACTCAGAAATCACACCCAACACAGATTGAGGTaGTGCAGACTGGCCTGGCACAAACAGCGCTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: ETLRNHTQHRLR*CRLAWHKQRSL Trigger: AAGGGAGCGCTGTTTGTGCCAGGCCAGTCTGCATCACCTCAATCTGTGTTGGGTGTGATTTCTGAGTGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR GCA 72 bp | CCTGGCACAAACAGCGCTCCCTTGGTGCACAGAACCTaGTCTCTTACTTACCACGGACCTACAGTTCTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: PGTNSAPLVHRT*SLTYHGPTVLK Trigger: TTTTAGAACTGTAGGTCCGTGGTAAGTAAGAGAGCAGGTTCTGTGCACCAAGGGAGCGCTGTTTGTGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR GCA 90 bp | GGCACGCCGCGGGCTCCGAGTCCTGGCACCAGTGAAGCTAAGGCACAGCACGGGGGTGGCTACGTGTCCTaGAGGCACCGGGGGTGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GTPRAPSPGTSEAKAQHGGGYVS*RHRGWR Trigger: CCTCCACCCCCGGTGCCTGCAGGACACGTAGCCACC...CCCGTGCTGTGCCTTAGCTTCACTGGTGCCAGGACTCGGAGCCCGCGGCGTGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR CCA 90 bp | GGCACGCCGCGGGCTCCGAGTCCTGGCACCAGTGAAGCTAAGGCACAGCACGGGGGTAGGGAAGGGCGGTaGCAGGTGAGGGCTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTPRAPSPGTSEAKAQHGGREGR*QVRAQA Trigger: TGCCTGAGCCCTCACCTGCCACCGCCCTTCCCTACC...CCCGTGCTGTGCCTTAGCTTCACTGGTGCCAGGACTCGGAGCCCGCGGCGTGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR CCA 90 bp | GATGACATCCCAGAGAGGAGGGAGCGGCCACTGCCAACCCTGTGGGGCGGGCTGAGGGGAGGCCCACTCTaGGAGGCAGGGGTGGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: DDIPERRERPLPTLWGGLRGGPL*EAGVGT Trigger: AGTGCCCACCCCTGCCTCCCAGAGTGGGCCTCCCCT...CAGCCCGCCCCACAGGGTTGGCAGTGGCCGCTCCCTCCTCTCTGGGATGTCATC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR TCA 90 bp | AAGGTCAGCCTGGCGGCCCCTTTACTGCATCCACCCGGAGCTCCCATGTGGCTGAAGGGCGGTGGCAGGTaGGGGCTCAGGCACCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KVSLAAPLLHPPGAPMWLKGGGR*GLRHPG Trigger: CCCAGGGTGCCTGAGCCCTCACCTGCCACCGCCCTT...CAGCCACATGGGAGCTCCGGGTGGATGCAGTAAAGGGGCCGCCAGGCTGACCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR CCA 90 bp | GATGACATCCCAGAGAGGAGGGAGCGGCCACTGCCAACCCTGTGGGGCGGGCTGCAGAAGGGAGCCCAGTaGCCTCCAGAGAGGGGTAGG | + |
|
Preference number: 4 (lower is better) Translates to: DDIPERRERPLPTLWGGLQKGAQ*PPERGR Trigger: CCTACCCCTCTCTGGAGGCCACTGGGCTCCCTTCTG...CAGCCCGCCCCACAGGGTTGGCAGTGGCCGCTCCCTCCTCTCTGGGATGTCATC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR CCA 90 bp | GGCCCAGATGCTGAACCGCACAGCCTCTGTTTGCAGAGCTCGGCACGGCAGGCACGTGGAGGGGGTCTCTaGGGCAGGGCTGGTGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GPDAEPHSLCLQSSARQARGGGL*GRAGGY Trigger: GTACCCACCAGCCCTGCCCCAGAGACCCCCTCCACG...TGCCTGCCGTGCCGAGCTCTGCAAACAGAGGCTGTGCGGTTCAGCATCTGGGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR GCA 90 bp | TGCCAGCTATGGCCTGGCAAGGTCAGCCTGGCGGCCCCTTTACTGCATCCACCCAGCAGCTCGTGCAGCTaGATCAGCGACAGCCCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: CQLWPGKVSLAAPLLHPPSSSCS*ISDSPA Trigger: CGCGGGGCTGTCGCTGATGCAGCTGCACGAGCTGCT...GGGTGGATGCAGTAAAGGGGCCGCCAGGCTGACCTTGCCAGGCCATAGCTGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR CCA 90 bp | GCCGGTGGCCCAGCTGGGGCAGGCTCACTAATCAGCGCTGCCTTGACTGTGTTAGAAGCCTGGCTGGTGTaGGGCCATCCGTGGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: AGGPAGAGSLISAALTVLEAWLV*GHPWRG Trigger: CCCCCTCCACGGATGGCCCCACACCAGCCAGGCTTC...TAACACAGTCAAGGCAGCGCTGATTAGTGAGCCTGCCCCAGCTGGGCCACCGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR GCA 90 bp | GCACCCAGCATGGCAGGAGTGGGAGGTTACTGGGCTGGCCTGCCCTGCACACTCCAGAAGGTTTCCCTCTaGCAGGCTCCGGTTGCTAGC | + |
|
Preference number: 4 (lower is better) Translates to: APSMAGVGGYWAGLPCTLQKVSL*QAPVAS Trigger: GCTAGCAACCGGAGCCTGGCAGAGGGAAACCTTCTG...GAGTGTGCAGGGCAGGCCAGCCCAGTAACCTCCCACTCCTGCCATGCTGGGTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR CCA 90 bp | CACCCGGAGCTCCCATGTGGCTGCGGCCCGAGACTGGCAGTGGGCGTTCCTGGTTTCAGCACCAGCTCCTaGAGCTTCTCCACTTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: HPELPCGCGPRLAVGVPGFSTSS*SFSTFT Trigger: TGTGAAAGTGGAGAAGCTCCAGGAGCTGGTGCTGAA...ACCAGGAACGCCCACTGCCAGTCTCGGGCCGCAGCCACATGGGAGCTCCGGGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR CAA 72 bp | GCCCTTGGCCCAGATGCTGAACCGCACAGCCTCTGTTaGCAGAGCTCGGCACGGCAGGCAGAGGATGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ALGPDAEPHSLC*QSSARQAEDVL Trigger: CAAGACATCCTCTGCCTGCCGTGCCGAGCTCTGCAAACAGAGGCTGTGCGGTTCAGCATCTGGGCCAAGGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR CAA 72 bp | GGCCCAGCTGGGGCAGGCTCACTAATCAGCGCTGCCTaGACTGTGTTACCTTGGGCTGTAGCCAGCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPAGAGSLISAA*TVLPWAVASWQ Trigger: CTGCCAGCTGGCTACAGCCCAAGGTAACACAGTCAAGGCAGCGCTGATTAGTGAGCCTGCCCCAGCTGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR CCA 90 bp | CCTGGCCGTGGGCACACATTCCAGGCTGGCCAGCTGAGACCAGTCTTTACTAGCAGGATGAAGCCTGGCTaGTGTGGGGCCATCCGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGRGHTFQAGQLRPVFTSRMKPG*CGAIRG Trigger: TCCACGGATGGCCCCACACCAGCCAGGCTTCATCCT...GCTAGTAAAGACTGGTCTCAGCTGGCCAGCCTGGAATGTGTGCCCACGGCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR CCA 90 bp | GCATGGCAGGAGTGGGAGGTTACTGGGCTGGCCTGCCCTGCACACTCGGTGAACAGAACCTGGAGTTCCTaGTATTTTTGGGTCAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: AWQEWEVTGLACPAHSVNRTWSS*YFWVRR Trigger: TCGCCTGACCCAAAAATACCAGGAACTCCAGGTTCT...GTTCACCGAGTGTGCAGGGCAGGCCAGCCCAGTAACCTCCCACTCCTGCCATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR CAA 72 bp | CAAACCCCTCCCATGCCTACGCCAGCACCTGCAGCATaGCTCCTGAGATTATCCGGGGTGGAGGAAGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: QTPPMPTPAPAA*LLRLSGVEEDG Trigger: TCCATCTTCCTCCACCCCGGATAATCTCAGGAGCAATGCTGCAGGTGCTGGCGTAGGCATGGGAGGGGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGCTGGGGCAGGCTCACTAATCAGCGCTGCCTTGACTGTGTTACCTTGGGCGTCCTCCTCAATCTTTaGCCCTTCCGCTTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: PSWGRLTNQRCLDCVTLGVLLNL*PFRLKK Trigger: CTTCTTCAAGCGGAAGGGGCAAAGATTGAGGAGGAC...GCCCAAGGTAACACAGTCAAGGCAGCGCTGATTAGTGAGCCTGCCCCAGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR GCA 90 bp | TGCCAGCTATGGCCTGGCAAGGTCAGCCTGGCGGCCCCTTTACTGCATCCACCCATCCAGAAACTTCTCTaGCATGTTCTCAGTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CQLWPGKVSLAAPLLHPPIQKLL*HVLSVL Trigger: GAGGACACTGAGAACATGGCAGAGAAGTTTCTGGAT...GGGTGGATGCAGTAAAGGGGCCGCCAGGCTGACCTTGCCAGGCCATAGCTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| 3UTR CAA 72 bp | CAGAGTCCAAATCCATGGAGAGGAAAACAGTCCAACTaGGGGACAAAGGCTGATGGCCCTGCCGGTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSPNPWRGKQSN*GTKADGPAGGP Trigger: TGGGCCACCGGCAGGGCCATCAGCCTTTGTCCCCAAGTTGGACTGTTTTCCTCTCCATGGATTTGGACTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR TCA 90 bp | CCACGGCAGCTGGTGGGCCAAGACTCGAAAATAAAACATATAATTAATCATGCTGCGGAGAATCCTTGCTaGGAGGGGAGGCCCACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRQLVGQDSKIKHIINHAAENPC*EGRPTL Trigger: CAGAGTGGGCCTCCCCTCTCAGCAAGGATTCTCCGC...AGCATGATTAATTATATGTTTTATTTTCGAGTCTTGGCCCACCAGCTGCCGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS GCA 90 bp | ACCATGTCGCCGAGCTGTGCATCGTCCTCCAGCAGCTCGTGCAGCTaGATCAGCGACAGCCCCGCGAAGCGCGCCTCGCTCACGGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TMSPSCASSSSSSCS*ISDSPAKRASLTAP Trigger: GGGCGCCGTGAGCGAGGCGCGCTTCGCGGGGCTGTCGCTGATGCAGCTGCACGAGCTGCTGGAGGACGATGCACAGCTCGGCGACATGGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS GCA 90 bp | CCCCGCACCATGTCGCCGAGCTGTGCATCGTCCTCCAGCAGCTCGTaGAGCTGCATCAGCGACAGCCCCGCGAAGCGCGCCTCGCTCACG | + |
|
Preference number: 5 (lower is better) Translates to: PRTMSPSCASSSSSS*SCISDSPAKRASLT Trigger: CGTGAGCGAGGCGCGCTTCGCGGGGCTGTCGCTGATGCAGCTGCACGAGCTGCTGGAGGACGATGCACAGCTCGGCGACATGGTGCGGGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR CAA 90 bp | GCCAGCTATGGCCTGGCAAGGTCAGCCTGGCGGCCCCTTTACTGCATCCACCCGCTGTGCGGAGAATCCTaGCTGAGAGGGGAGGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ASYGLARSAWRPLYCIHPLCGES*LRGEAH Trigger: GTGGGCCTCCCCTCTCAGCAAGGATTCTCCGCACAG...CGGGTGGATGCAGTAAAGGGGCCGCCAGGCTGACCTTGCCAGGCCATAGCTGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS CCA 90 bp | GTGGGCACTGTAATCCCGGGTATGCAGAAACCTGTCCCGAGCCCATaGCAGCAGCGAAAGGGGTGGCTACGTGTCCTGCAGGCACCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VGTVIPGMQKPVPSP*QQRKGWLRVLQAPG Trigger: CCCCGGTGCCTGCAGGACACGTAGCCACCCCTTTCGCTGCTGCCATGGGCTCGGGACAGGTTTCTGCATACCCGGGATTACAGTGCCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS CCA 90 bp | AGGATGAAGCCTGGCTGGTGTGGGGCCATCCGTGGAGGGGGTCTCTaGGGCAGGGCTGGTGGGTACGGTGACACCAACTGTGCGGAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: RMKPGWCGAIRGGGL*GRAGGYGDTNCAEN Trigger: ATTCTCCGCACAGTTGGTGTCACCGTACCCACCAGCCCTGCCCCAGAGACCCCCTCCACGGATGGCCCCACACCAGCCAGGCTTCATCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR CAA 90 bp | TCAGCCTGGCGGCCCCTTTACTGCATCCACCCGGAGCTCCCATGTGGCTGCGGCGAGTTCCTGGTATTTTaGGGTCAGGCGAGCTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SAWRPLYCIHPELPCGCGEFLVF*GQASFL Trigger: CAGAAAGCTCGCCTGACCCAAAAATACCAGGAACTC...GCCGCAGCCACATGGGAGCTCCGGGTGGATGCAGTAAAGGGGCCGCCAGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR CAA 90 bp | TCAGCCTGGCGGCCCCTTTACTGCATCCACCCGGAGCTCCCATGTGGCTGCGGCTGTCCTCCTCAATCTTaGCCCCTTCCGCTTGAAGAA | + |
|
Preference number: 5 (lower is better) Translates to: SAWRPLYCIHPELPCGCGCPPQS*PLPLEE Trigger: TTCTTCAAGCGGAAGGGGCAAAGATTGAGGAGGACA...GCCGCAGCCACATGGGAGCTCCGGGTGGATGCAGTAAAGGGGCCGCCAGGCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS CCA 90 bp | ACACCAACTGTGCGGAGAATCCTTGCTGAGAGGGGAGGCCCACTCTaGGAGGCAGGGGTGGGCACTGTAATCCCGGGTATGCAGAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: TPTVRRILAERGGPL*EAGVGTVIPGMQKP Trigger: AGGTTTCTGCATACCCGGGATTACAGTGCCCACCCCTGCCTCCCAGAGTGGGCCTCCCCTCTCAGCAAGGATTCTCCGCACAGTTGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS-3UTR CAA 90 bp | TGCCAGCTATGGCCTGGCAAGGTCAGCCTGGCGGCCCCTTTACTGCATCCACCCTTTCTGAGCATCCAGTaGGGGCTGGTACAGAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: CQLWPGKVSLAAPLLHPPFLSIQ*GLVQKV Trigger: AACCTTCTGTACCAGCCCCAACTGGATGCTCAGAAA...GGGTGGATGCAGTAAAGGGGCCGCCAGGCTGACCTTGCCAGGCCATAGCTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS TCA 90 bp | AAGAGAACCTGGAGTTCCTGGTATTTTTGGGTCAGGCGAGCTTTCTaGGCATCCAGTTGGGGCTGGTACAGAAGGTTTCCCTCTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KRTWSSWYFWVRRAF*ASSWGWYRRFPSAR Trigger: CCTGGCAGAGGGAAACCTTCTGTACCAGCCCCAACTGGATGCTCAGAAAGCTCGCCTGACCCAAAAATACCAGGAACTCCAGGTTCTCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS TCA 90 bp | TCTGCCATGTTCTCAGTGTCCTCCTCAATCTTTGCCCCTTCCGCTTaGAGAAGCGCTAACAGAGTCTCCAAGGAAGCGTTGTTAGACTGT | + |
|
Preference number: 5 (lower is better) Translates to: SAMFSVSSSIFAPSA*RSANRVSKEALLDC Trigger: ACAGTCTAACAACGCTTCCTTGGAGACTCTGTTAGCGCTTCTTCAAGCGGAAGGGGCAAAGATTGAGGAGGACACTGAGAACATGGCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS GCA 72 bp | CCGAGCTGTGCATCGTCCTCCAGCAGCTCGTGCAGCTaGATCAGCGACAGCCCCGCGAAGCGCGCCTCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: PSCASSSSSSCS*ISDSPAKRASL Trigger: GAGCGAGGCGCGCTTCGCGGGGCTGTCGCTGATGCAGCTGCACGAGCTGCTGGAGGACGATGCACAGCTCGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
||
| CDS CCA 72 bp | AAACCTGTCCCGAGCCCATGGCAGCAGCGAAAGGGGTaGCTACGTGTCCTGCAGGCACCGGGGGTGGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: KPVPSPWQQRKG*LRVLQAPGVEG Trigger: CCCCTCCACCCCCGGTGCCTGCAGGACACGTAGCCACCCCTTTCGCTGCTGCCATGGGCTCGGGACAGGTTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| CDS TCA 72 bp | CTCCGGTTGCTAGCCAGGGTCATCTCTTTGTTAAGCTaGACCGTCTGCGCCTCTTCCATACCCCGCACCATG | + |
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Preference number: 6 (lower is better) Translates to: LRLLARVISLLS*TVCASSIPRTM Trigger: CATGGTGCGGGGTATGGAAGAGGCGCAGACGGTTCAGCTTAACAAAGAGATGACCCTGGCTAGCAACCGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| CDS CAA 90 bp | GAGTTCCTGGTATTTTTGGGTCAGGCGAGCTTTCTGAGCATCCAGTaGGGGCTGGTACAGAAGGTTTCCCTCTGCCAGGCTCCGGTTGCT | + |
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Preference number: 6 (lower is better) Translates to: EFLVFLGQASFLSIQ*GLVQKVSLCQAPVA Trigger: AGCAACCGGAGCCTGGCAGAGGGAAACCTTCTGTACCAGCCCCAACTGGATGCTCAGAAAGCTCGCCTGACCCAAAAATACCAGGAACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| CDS CAA 72 bp | GTATTTTTGGGTCAGGCGAGCTTTCTGAGCATCCAGTaGGGGCTGGTACAGAAGGTTTCCCTCTGCCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: VFLGQASFLSIQ*GLVQKVSLCQA Trigger: AGCCTGGCAGAGGGAAACCTTCTGTACCAGCCCCAACTGGATGCTCAGAAAGCTCGCCTGACCCAAAAATAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| CDS TCA 72 bp | TGGAGTTCCTGGTATTTTTGGGTCAGGCGAGCTTTCTaGGCATCCAGTTGGGGCTGGTACAGAAGGTTTCCC | + |
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Preference number: 6 (lower is better) Translates to: WSSWYFWVRRAF*ASSWGWYRRFP Trigger: GGGAAACCTTCTGTACCAGCCCCAACTGGATGCTCAGAAAGCTCGCCTGACCCAAAAATACCAGGAACTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| CDS TCA 72 bp | TTCTCAGTGTCCTCCTCAATCTTTGCCCCTTCCGCTTaGAGAAGCGCTAACAGAGTCTCCAAGGAAGCGTTG | + |
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Preference number: 6 (lower is better) Translates to: FSVSSSIFAPSA*RSANRVSKEAL Trigger: CAACGCTTCCTTGGAGACTCTGTTAGCGCTTCTTCAAGCGGAAGGGGCAAAGATTGAGGAGGACACTGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| CDS CAA 72 bp | ATAGGCCTCAAAGAGAACCTGGAGTTCCTGGTATTTTaGGGTCAGGCGAGCTTTCTGAGCATCCAGTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: IGLKENLEFLVF*GQASFLSIQLG Trigger: CCCCAACTGGATGCTCAGAAAGCTCGCCTGACCCAAAAATACCAGGAACTCCAGGTTCTCTTTGAGGCCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| CDS CAA 90 bp | CTTTATCTGATAGGCCTCAAAGAGAACCTGGAGTTCCTGGTATTTTaGGGTCAGGCGAGCTTTCTGAGCATCCAGTTGGGGCTGGTACAG | + |
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Preference number: 6 (lower is better) Translates to: LYLIGLKENLEFLVF*GQASFLSIQLGLVQ Trigger: CTGTACCAGCCCCAACTGGATGCTCAGAAAGCTCGCCTGACCCAAAAATACCAGGAACTCCAGGTTCTCTTTGAGGCCTATCAGATAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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| CDS CAA 72 bp | ACTTCTCTGCCATGTTCTCAGTGTCCTCCTCAATCTTaGCCCCTTCCGCTTGAAGAAGCGCTAACAGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: TSLPCSQCPPQS*PLPLEEALTES Trigger: AGACTCTGTTAGCGCTTCTTCAAGCGGAAGGGGCAAAGATTGAGGAGGACACTGAGAACATGGCAGAGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040967.9 |
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