Pregenerated sensors for VPS37A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031600Ensembl transcript IDs: ENSMUST00000098817.4
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GTCAGGCCGTGCCCCGACCTTGTTTGTAACAAGGGCCTCACTGGCTaGCATTCTGCCTACTATATAAATTGGCCTGCAAAGCTTCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: VRPCPDLVCNKGLTG*HSAYYINWPAKLPG Trigger: CCCAGGAAGCTTTGCAGGCCAATTTATATAGTAGGCAGAATGGCAGCCAGTGAGGCCCTTGTTACAAACAAGGTCGGGGCACGGCCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR GCA 90 bp | CAAGGGCCTCACTGGCTGCCATTCTGCCTACTATATAAATTGGCCTaGAAAGCTTCCTGGGACAAGTCTCTCATTCCTCTCCTGTATAGG | + |
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Preference number: 1 (lower is better) Translates to: QGPHWLPFCLLYKLA*KASWDKSLIPLLYR Trigger: CCTATACAGGAGAGGAATGAGAGACTTGTCCCAGGAAGCTTTGCAGGCCAATTTATATAGTAGGCAGAATGGCAGCCAGTGAGGCCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CCA 90 bp | TGTAACAAGGGCCTCACTGGCTGCCATTCTGCCTACTATATAAATTaGCCTGCAAAGCTTCCTGGGACAAGTCTCTCATTCCTCTCCTGT | + |
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Preference number: 1 (lower is better) Translates to: CNKGLTGCHSAYYIN*PAKLPGTSLSFLSC Trigger: ACAGGAGAGGAATGAGAGACTTGTCCCAGGAAGCTTTGCAGGCCAATTTATATAGTAGGCAGAATGGCAGCCAGTGAGGCCCTTGTTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CCA 90 bp | TTTTGCCACCTAAGTGCTGGCATTGAAGGTGTGTGTCATGACGCCTaGCTGTTTCGCCATTTGTATAGTACCTGCTCTTTAGACAATAGG | + |
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Preference number: 1 (lower is better) Translates to: FCHLSAGIEGVCHDA*LFRHLYSTCSLDNR Trigger: CCTATTGTCTAAAGAGCAGGTACTATACAAATGGCGAAACAGCCAGGCGTCATGACACACACCTTCAATGCCAGCACTTAGGTGGCAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CCA 90 bp | TGGCTGCCATTCTGCCTACTATATAAATTGGCCTGCAAAGCTTCCTaGGACAAGTCTCTCATTCCTCTCCTGTATAGGAGTGATGGAATT | + |
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Preference number: 1 (lower is better) Translates to: WLPFCLLYKLACKAS*DKSLIPLLYRSDGI Trigger: AATTCCATCACTCCTATACAGGAGAGGAATGAGAGACTTGTCCCAGGAAGCTTTGCAGGCCAATTTATATAGTAGGCAGAATGGCAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR TCA 90 bp | TGTGTGTCACACTTGTGTTGTCTCTGGGTAGTCTTTCTACAATACTaGGTGAGGTGTCTAGCAGAAACCTTAATAAGAAGACTGCTGGTC | + |
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Preference number: 1 (lower is better) Translates to: CVSHLCCLWVVFLQY*VRCLAETLIRRLLV Trigger: GACCAGCAGTCTTCTTATTAAGGTTTCTGCTAGACACCTCACTCAGTATTGTAGAAAGACTACCCAGAGACAACACAAGTGTGACACACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR GCA 90 bp | TTGGCAGGACTGCTGTTTCCTGACACTGAATATCTGAAAACAAACTaGTCTGGACAGTTTCATCATCTAGAAAGAAAGGGGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: LAGLLFPDTEYLKTN*SGQFHHLERKGCVC Trigger: ACACACACACCCCTTTCTTTCTAGATGATGAAACTGTCCAGAGCAGTTTGTTTTCAGATATTCAGTGTCAGGAAACAGCAGTCCTGCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR TCA 90 bp | GCTACACAGTGCAACCTGTTCCAGAACAAAATACAACCAATGCATTaGCCTGTATCGCTGCCTAAATGTATCTTTAGTCTGAAAGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: ATQCNLFQNKIQPMH*PVSLPKCIFSLKVK Trigger: TTTCACTTTCAGACTAAAGATACATTTAGGCAGCGATACAGGTCAATGCATTGGTTGTATTTTGTTCTGGAACAGGTTGCACTGTGTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CCA 90 bp | TTGCTAAAGGCAAGCAACTGTGGTCAAATGTCTTGGTTTAATGTCTaGATTGTAAAGAGGCTCTCTGAATTTTTAGGGAGAAATTATGCT | + |
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Preference number: 1 (lower is better) Translates to: LLKASNCGQMSWFNV*IVKRLSEFLGRNYA Trigger: AGCATAATTTCTCCCTAAAAATTCAGAGAGCCTCTTTACAATCCAGACATTAAACCAAGACATTTGACCACAGTTGCTTGCCTTTAGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGCTACACATGCTCACTGCAGCCTGCCTTTCAGAGTCCCTGGATAAGTCAGACAGGCAGCTATCATaGTGCATACCCAGCACGGGA | + |
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Preference number: 2 (lower is better) Translates to: LKLHMLTAACLSESLDKSDRQLS*CIPSTG Trigger: TCCCGTGCTGGGTATGCACCATGATAGCTGCCTGTC...TGACTTATCCAGGGACTCTGAAAGGCAGGCTGCAGTGAGCATGTGTAGCTTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CAA 90 bp | TGGCACCTGTCTGTAACCCTGTACTCAGGGAGGAGAAGCACAAGTTaGAGGCTAGAGTGGGCTACACAGTGCAACCTGTTCCAGAACAAA | + |
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Preference number: 2 (lower is better) Translates to: WHLSVTLYSGRRSTS*RLEWATQCNLFQNK Trigger: TTTGTTCTGGAACAGGTTGCACTGTGTAGCCCACTCTAGCCTCAAACTTGTGCTTCTCCTCCCTGAGTACAGGGTTACAGACAGGTGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR CCA 90 bp | CTGAAGCTACACATGCTCACTGCAGCCTGCCTTTCAGAGTCCCTGGATAAGTCAGCCTGCAAAGCTTCCTaGGACAAGTCTCTCATTCCT | + |
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Preference number: 2 (lower is better) Translates to: LKLHMLTAACLSESLDKSACKAS*DKSLIP Trigger: AGGAATGAGAGACTTGTCCCAGGAAGCTTTGCAGGC...TGACTTATCCAGGGACTCTGAAAGGCAGGCTGCAGTGAGCATGTGTAGCTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR CCA 90 bp | CATGCTTGCATGACACACAAGTTAGCACTTAGCCACCTCCCCAGCCCAAGTTTTGTTGCTTTCTTGAGATaGCACCTTGGCAGGACTGCT | + |
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Preference number: 2 (lower is better) Translates to: HACMTHKLALSHLPSPSFVAFLR*HLGRTA Trigger: AGCAGTCCTGCCAAGGTGCCATCTCAAGAAAGCAAC...AAAACTTGGGCTGGGGAGGTGGCTAAGTGCTAACTTGTGTGTCATGCAAGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CAA 90 bp | AACCATCATGGTGGAAGGCATGGTATCAGCCAAGCAGGTATGGCATaGGAGCAGCAGCTGACAGCTCACATTTCAAGACATAACCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: NHHGGRHGISQAGMA*EQQLTAHISRHNQE Trigger: CTCTTGGTTATGTCTTGAAATGTGAGCTGTCAGCTGCTGCTCCAATGCCATACCTGCTTGGCTGATACCATGCCTTCCACCATGATGGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CAA 90 bp | AAGCATGCCCTGGCCTGGGTGAGCAAGTGTGGTGTGTGTTTGTGTTaGTGTGTCACACTTGTGTTGTCTCTGGGTAGTCTTTCTACAATA | + |
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Preference number: 2 (lower is better) Translates to: KHALAWVSKCGVCLC*CVTLVLSLGSLSTI Trigger: TATTGTAGAAAGACTACCCAGAGACAACACAAGTGTGACACACAAACACAAACACACACCACACTTGCTCACCCAGGCCAGGGCATGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CAA 90 bp | AACAGTTCCACCAACCAGGAACAGAGCATTCAAATAGATGAGCCTTaGGGAGCCATTCTTCAAACCCCCAACCCATCTGCTAAACACAGG | + |
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Preference number: 2 (lower is better) Translates to: NSSTNQEQSIQIDEP*GAILQTPNPSAKHR Trigger: CCTGTGTTTAGCAGATGGGTTGGGGGTTTGAAGAATGGCTCCCAAAGGCTCATCTATTTGAATGCTCTGTTCCTGGTTGGTGGAACTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR TCA 90 bp | GTTTGTAACAAGGGCCTCACTGGCTGCCATTCTGCCTACTATATAAATTGGCCTATCTGTAGGTCTGCCTaGGGATTCCATAGCATACCC | + |
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Preference number: 2 (lower is better) Translates to: VCNKGLTGCHSAYYINWPICRSA*GFHSIP Trigger: GGGTATGCTATGGAATCCTCAGGCAGACCTACAGAT...AGGCCAATTTATATAGTAGGCAGAATGGCAGCCAGTGAGGCCCTTGTTACAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR CCA 90 bp | CTTGTTTGTAACAAGGGCCTCACTGGCTGCCATTCTGCCTACTATATAAATTGGCTAGTACTCAAGAGGTaGAAGACCCGACAGCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: LVCNKGLTGCHSAYYINWLVLKR*KTRQPG Trigger: ACCTGGCTGTCGGGTCTTCCACCTCTTGAGTACTAG...CCAATTTATATAGTAGGCAGAATGGCAGCCAGTGAGGCCCTTGTTACAAACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR TCA 90 bp | CTGAAGCTACACATGCTCACTGCAGCCTGCCTTTCAGAGTCCCTGGATAAGTCAGTCACGGATGAAAACTaGGCAATTATGTGTTATGGT | + |
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Preference number: 2 (lower is better) Translates to: LKLHMLTAACLSESLDKSVTDEN*AIMCYG Trigger: ACCATAACACATAATTGCTCAGTTTTCATCCGTGAC...TGACTTATCCAGGGACTCTGAAAGGCAGGCTGCAGTGAGCATGTGTAGCTTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CAA 90 bp | GCTGGCATTGAAGGTGTGTGTCATGACGCCTGGCTGTTTCGCCATTaGTATAGTACCTGCTCTTTAGACAATAGGTCAACAACAAAGATA | + |
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Preference number: 2 (lower is better) Translates to: AGIEGVCHDAWLFRH*YSTCSLDNRSTTKI Trigger: TATCTTTGTTGTTGACCTATTGTCTAAAGAGCAGGTACTATACAAATGGCGAAACAGCCAGGCGTCATGACACACACCTTCAATGCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR TCA 90 bp | GGCATTGAAGGTGTGTGTCATGACGCCTGGCTGTTTCGCCATTTGTATAGTACCTTTGAAAGAAAAGGCTaGCAGGAAGAAGAATCTAAG | + |
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Preference number: 2 (lower is better) Translates to: GIEGVCHDAWLFRHLYSTFERKG*QEEESK Trigger: CTTAGATTCTTCTTCCTGTCAGCCTTTTCTTTCAAA...GGTACTATACAAATGGCGAAACAGCCAGGCGTCATGACACACACCTTCAATGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR TCA 90 bp | CATGGACTACTGGATGGCAATTCTGAAGTTTCTGTTAAAATGCATTTAAAACAGATGCCCTGGCCTGGGTaGGCAAGTGTGGTGTGTGTT | + |
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Preference number: 2 (lower is better) Translates to: HGLLDGNSEVSVKMHLKQMPWPG*ASVVCV Trigger: AACACACACCACACTTGCTCACCCAGGCCAGGGCAT...CTGTTTTAAATGCATTTTAACAGAAACTTCAGAATTGCCATCCAGTAGTCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR GCA 90 bp | CTGAAGCTACACATGCTCACTGCAGCCTGCCTTTCAGAGTCCCTGGATAAGTCATATCTGAAAACAAACTaGTCTGGACAGTTTCATCAT | + |
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Preference number: 2 (lower is better) Translates to: LKLHMLTAACLSESLDKSYLKTN*SGQFHH Trigger: ATGATGAAACTGTCCAGAGCAGTTTGTTTTCAGATA...TGACTTATCCAGGGACTCTGAAAGGCAGGCTGCAGTGAGCATGTGTAGCTTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR CCA 90 bp | CCATGTACTCTGTCTCCTGCAAATAAAGAATGCAAATTCACACTGGCATATTCATCTGGACCTCAGCCATaGTTTCAAGTGCCCATCCCT | + |
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Preference number: 2 (lower is better) Translates to: PCTLSPANKECKFTLAYSSGPQP*FQVPIP Trigger: AGGGATGGGCACTTGAAACCATGGCTGAGGTCCAGA...TGAATATGCCAGTGTGAATTTGCATTCTTTATTTGCAGGAGACAGAGTACATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CAA 90 bp | GGCCTGTTCTACCATGTACCAGGTTTTTATATAGGTCCTAAGAATTaGAATCGGGTCCCTCATGCTTGCATGACACACAAGTTAGCACTT | + |
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Preference number: 2 (lower is better) Translates to: GLFYHVPGFYIGPKN*NRVPHACMTHKLAL Trigger: AAGTGCTAACTTGTGTGTCATGCAAGCATGAGGGACCCGATTCAAATTCTTAGGACCTATATAAAAACCTGGTACATGGTAGAACAGGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR TCA 90 bp | CTTGTTTGTAACAAGGGCCTCACTGGCTGCCATTCTGCCTACTATATAAATTGGCTGACACTGAATATCTaGAAACAAACTGCTCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LVCNKGLTGCHSAYYINWLTLNI*KQTALD Trigger: GTCCAGAGCAGTTTGTTTTCAGATATTCAGTGTCAG...CCAATTTATATAGTAGGCAGAATGGCAGCCAGTGAGGCCCTTGTTACAAACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR TCA 90 bp | CTTGTTTGTAACAAGGGCCTCACTGGCTGCCATTCTGCCTACTATATAAATTGGCACAAATGTGAAACATaGCTCCACCTGTTATCTCAC | + |
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Preference number: 2 (lower is better) Translates to: LVCNKGLTGCHSAYYINWHKCET*LHLLSH Trigger: GTGAGATAACAGGTGGAGTCATGTTTCACATTTGTG...CCAATTTATATAGTAGGCAGAATGGCAGCCAGTGAGGCCCTTGTTACAAACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR TCA 90 bp | TTCTACCATGTACCAGGTTTTTATATAGGTCCTAAGAATTTGAATCGGGTCCCTACACTCAGAAGTCTCTaGATGCCCCCAAGTTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: FYHVPGFYIGPKNLNRVPTLRSL*MPPSWS Trigger: TGACCAACTTGGGGGCATTCAGAGACTTCTGAGTGT...AGGGACCCGATTCAAATTCTTAGGACCTATATAAAAACCTGGTACATGGTAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR GCA 90 bp | GGCATTGAAGGTGTGTGTCATGACGCCTGGCTGTTTCGCCATTTGTATAGTACCTTCACTCTTATTTACTaGAGGTATTACAGGTTGCTT | + |
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Preference number: 2 (lower is better) Translates to: GIEGVCHDAWLFRHLYSTFTLIY*RYYRLL Trigger: AAGCAACCTGTAATACCTGCAGTAAATAAGAGTGAA...GGTACTATACAAATGGCGAAACAGCCAGGCGTCATGACACACACCTTCAATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR GCA 90 bp | GTTTGTAACAAGGGCCTCACTGGCTGCCATTCTGCCTACTATATAAATTGGCCTACAAAATACAACCAATaGATTGACCTGTATCGCTGC | + |
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Preference number: 2 (lower is better) Translates to: VCNKGLTGCHSAYYINWPTKYNQ*IDLYRC Trigger: GCAGCGATACAGGTCAATGCATTGGTTGTATTTTGT...AGGCCAATTTATATAGTAGGCAGAATGGCAGCCAGTGAGGCCCTTGTTACAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR GCA 90 bp | TTTTGTTCCCTCCATCCCTTTACAAGACATAATTTAGGTATGTTCATGGAGTCAGCTACACATGCTCACTaGAGCCTGCCTTTCAGAGTC | + |
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Preference number: 2 (lower is better) Translates to: FCSLHPFTRHNLGMFMESATHAH*SLPFRV Trigger: GACTCTGAAAGGCAGGCTGCAGTGAGCATGTGTAGC...TGACTCCATGAACATACCTAAATTATGTCTTGTAAAGGGATGGAGGGAACAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CAA 90 bp | AAACACAAATACCAGTACACTCAGAAGTCTCTGAATGCCCCCAAGTaGGTCACAAATGTGAAACATGACTCCACCTGTTATCTCACCTAT | + |
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Preference number: 2 (lower is better) Translates to: KHKYQYTQKSLNAPK*VTNVKHDSTCYLTY Trigger: ATAGGTGAGATAACAGGTGGAGTCATGTTTCACATTTGTGACCAACTTGGGGGCATTCAGAGACTTCTGAGTGTACTGGTATTTGTGTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR GCA 90 bp | TTTTGTTCCCTCCATCCCTTTACAAGACATAATTTAGGTATGTTCATGGAGTCAGCACCTTGGCAGGACTaGTGTTTCCTGACACTGAAT | + |
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Preference number: 2 (lower is better) Translates to: FCSLHPFTRHNLGMFMESAPWQD*CFLTLN Trigger: ATTCAGTGTCAGGAAACAGCAGTCCTGCCAAGGTGC...TGACTCCATGAACATACCTAAATTATGTCTTGTAAAGGGATGGAGGGAACAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR GCA 90 bp | GTTTGTAACAAGGGCCTCACTGGCTGCCATTCTGCCTACTATATAAATTGGCCTACAATCCATAATGTATaGAGGCTTTGGAATGACAGT | + |
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Preference number: 2 (lower is better) Translates to: VCNKGLTGCHSAYYINWPTIHNV*RLWNDS Trigger: ACTGTCATTCCAAAGCCTGCATACATTATGGATTGT...AGGCCAATTTATATAGTAGGCAGAATGGCAGCCAGTGAGGCCCTTGTTACAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR TCA 90 bp | TCTCTGAATGCCCCCAAGTTGGTCACAAATGTGAAACATGACTCCACCTGTTATAGCACTCTTGATAAATaGGGCAGCTTCAAGTTAAAA | + |
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Preference number: 2 (lower is better) Translates to: SLNAPKLVTNVKHDSTCYSTLDK*GSFKLK Trigger: TTTTAACTTGAAGCTGCCTCATTTATCAAGAGTGCT...ATAACAGGTGGAGTCATGTTTCACATTTGTGACCAACTTGGGGGCATTCAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR GCA 90 bp | GTTTGTAACAAGGGCCTCACTGGCTGCCATTCTGCCTACTATATAAATTGGCCTCCTGCAAATAAAGAATaGAAATTCACACTGGCATAT | + |
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Preference number: 2 (lower is better) Translates to: VCNKGLTGCHSAYYINWPPANKE*KFTLAY Trigger: ATATGCCAGTGTGAATTTGCATTCTTTATTTGCAGG...AGGCCAATTTATATAGTAGGCAGAATGGCAGCCAGTGAGGCCCTTGTTACAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTTCCCTCCATCCCTTTACAAGACATAATTTAGGTATGTTCATGGAGTCACTGGGTGAGCAAGTGTaGTGTGTGTTTGTGTTTGTG | + |
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Preference number: 2 (lower is better) Translates to: FCSLHPFTRHNLGMFMESLGEQV*CVFVFV Trigger: CACAAACACAAACACACACCACACTTGCTCACCCAG...TGACTCCATGAACATACCTAAATTATGTCTTGTAAAGGGATGGAGGGAACAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR CCA 90 bp | CTTGTTTGTAACAAGGGCCTCACTGGCTGCCATTCTGCCTACTATATAAATTGGTCTTGGTTTAATGTCTaGATTGTAAAGAGGCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LVCNKGLTGCHSAYYINWSWFNV*IVKRLS Trigger: AGAGAGCCTCTTTACAATCCAGACATTAAACCAAGA...CCAATTTATATAGTAGGCAGAATGGCAGCCAGTGAGGCCCTTGTTACAAACAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR TCA 90 bp | AATGTTAAACACAAATACCAGTACACTCAGAAGTCTCTGAATGCCCCCAAGTTGAATGACAGTCACGGATaGAAACTGAGCAATTATGTG | + |
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Preference number: 2 (lower is better) Translates to: NVKHKYQYTQKSLNAPKLNDSHG*KLSNYV Trigger: CACATAATTGCTCAGTTTTCATCCGTGACTGTCATT...CAACTTGGGGGCATTCAGAGACTTCTGAGTGTACTGGTATTTGTGTTTAACATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR GCA 90 bp | CATGGACTACTGGATGGCAATTCTGAAGTTTCTGTTAAAATGCATTTAAAACAGAAGGGCCTCACTGGCTaGCATTCTGCCTACTATATA | + |
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Preference number: 2 (lower is better) Translates to: HGLLDGNSEVSVKMHLKQKGLTG*HSAYYI Trigger: TATATAGTAGGCAGAATGGCAGCCAGTGAGGCCCTT...CTGTTTTAAATGCATTTTAACAGAAACTTCAGAATTGCCATCCAGTAGTCCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR TCA 90 bp | CATGGACTACTGGATGGCAATTCTGAAGTTTCTGTTAAAATGCATTTAAAACAGATGCAGGCTTTGGAATaGCAGTCACGGATGAAAACT | + |
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Preference number: 2 (lower is better) Translates to: HGLLDGNSEVSVKMHLKQMQALE*QSRMKT Trigger: AGTTTTCATCCGTGACTGTCATTCCAAAGCCTGCAT...CTGTTTTAAATGCATTTTAACAGAAACTTCAGAATTGCCATCCAGTAGTCCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR TCA 90 bp | CATGGACTACTGGATGGCAATTCTGAAGTTTCTGTTAAAATGCATTTAAAACAGGTCTTTCTACAATACTaGGTGAGGTGTCTAGCAGAA | + |
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Preference number: 2 (lower is better) Translates to: HGLLDGNSEVSVKMHLKQVFLQY*VRCLAE Trigger: TTCTGCTAGACACCTCACTCAGTATTGTAGAAAGAC...CTGTTTTAAATGCATTTTAACAGAAACTTCAGAATTGCCATCCAGTAGTCCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR GCA 90 bp | CATGGACTACTGGATGGCAATTCTGAAGTTTCTGTTAAAATGCATTTAAAACAGCTATATAAATTGGCCTaGAAAGCTTCCTGGGACAAG | + |
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Preference number: 2 (lower is better) Translates to: HGLLDGNSEVSVKMHLKQLYKLA*KASWDK Trigger: CTTGTCCCAGGAAGCTTTGCAGGCCAATTTATATAG...CTGTTTTAAATGCATTTTAACAGAAACTTCAGAATTGCCATCCAGTAGTCCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR GCA 90 bp | CATGGACTACTGGATGGCAATTCTGAAGTTTCTGTTAAAATGCATTTAAAACAGCATTTGTATAGTACCTaGTCTTTAGACAATAGGTCA | + |
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Preference number: 2 (lower is better) Translates to: HGLLDGNSEVSVKMHLKQHLYST*SLDNRS Trigger: TGACCTATTGTCTAAAGAGCAGGTACTATACAAATG...CTGTTTTAAATGCATTTTAACAGAAACTTCAGAATTGCCATCCAGTAGTCCATG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR TCA 72 bp | GAGCTCAGTCCCCAAGCTCCACAGGACTGGGGTTGGTaGTACATGCTTAGGCTCCTAGTACTCAAGAGGTGG | + |
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Preference number: 3 (lower is better) Translates to: ELSPQAPQDWGW*YMLRLLVLKRW Trigger: CCACCTCTTGAGTACTAGGAGCCTAAGCATGTATCACCAACCCCAGTCCTGTGGAGCTTGGGGACTGAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR CAA 90 bp | GGCATTGAAGGTGTGTGTCATGACGCCTGGCTGTTTCGCCATTTGTATAGTACCAGGAGAAGCACAAGTTaGAGGCTAGAGTGGGCTACA | + |
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Preference number: 3 (lower is better) Translates to: GIEGVCHDAWLFRHLYSTRRSTS*RLEWAT Trigger: TGTAGCCCACTCTAGCCTCAAACTTGTGCTTCTCCT...GGTACTATACAAATGGCGAAACAGCCAGGCGTCATGACACACACCTTCAATGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR TCA 72 bp | GTATCAGCCAAGCAGGTATGGCATTGGAGCAGCAGCTaGCAGCTCACATTTCAAGACATAACCAAGAGGCAG | + |
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Preference number: 3 (lower is better) Translates to: VSAKQVWHWSSS*QLTFQDITKRQ Trigger: CTGCCTCTTGGTTATGTCTTGAAATGTGAGCTGTCAGCTGCTGCTCCAATGCCATACCTGCTTGGCTGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR GCA 72 bp | TGCCCCGACCTTGTTTGTAACAAGGGCCTCACTGGCTaGCATTCTGCCTACTATATAAATTGGCCTGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: CPDLVCNKGLTG*HSAYYINWPAK Trigger: CTTTGCAGGCCAATTTATATAGTAGGCAGAATGGCAGCCAGTGAGGCCCTTGTTACAAACAAGGTCGGGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR GCA 72 bp | ATAGGTCCTAAGAATTTGAATCGGGTCCCTCATGCTTaGATGACACACAAGTTAGCACTTAGCCACCTCCCC | + |
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Preference number: 3 (lower is better) Translates to: IGPKNLNRVPHA*MTHKLALSHLP Trigger: GGGGAGGTGGCTAAGTGCTAACTTGTGTGTCATGCAAGCATGAGGGACCCGATTCAAATTCTTAGGACCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR CAA 90 bp | GGCATTGAAGGTGTGTGTCATGACGCCTGGCTGTTTCGCCATTTGTATAGTACCATAGGTCCTAAGAATTaGAATCGGGTCCCTCATGCT | + |
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Preference number: 3 (lower is better) Translates to: GIEGVCHDAWLFRHLYSTIGPKN*NRVPHA Trigger: AGCATGAGGGACCCGATTCAAATTCTTAGGACCTAT...GGTACTATACAAATGGCGAAACAGCCAGGCGTCATGACACACACCTTCAATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR CAA 90 bp | CTTGTTTGTAACAAGGGCCTCACTGGCTGCCATTCTGCCTACTATATAAATTGGTTACAGGTTGCTTTCTaGAGATGGCACCTTGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: LVCNKGLTGCHSAYYINWLQVAF*RWHLGR Trigger: CCTGCCAAGGTGCCATCTCAAGAAAGCAACCTGTAA...CCAATTTATATAGTAGGCAGAATGGCAGCCAGTGAGGCCCTTGTTACAAACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR GCA 72 bp | AAGTCAATACTGAAGCTACACATGCTCACTGCAGCCTaGCTTTCAGAGTCCCTGGATAAGTCATGGTCGATT | + |
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Preference number: 3 (lower is better) Translates to: KSILKLHMLTAA*LSESLDKSWSI Trigger: AATCGACCATGACTTATCCAGGGACTCTGAAAGGCAGGCTGCAGTGAGCATGTGTAGCTTCAGTATTGACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CCA 72 bp | TACTCAGGGAGGAGAAGCACAAGTTTGAGGCTAGAGTaGGCTACACAGTGCAACCTGTTCCAGAACAAAATA | + |
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Preference number: 3 (lower is better) Translates to: YSGRRSTSLRLE*ATQCNLFQNKI Trigger: TATTTTGTTCTGGAACAGGTTGCACTGTGTAGCCCACTCTAGCCTCAAACTTGTGCTTCTCCTCCCTGAGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CCA 72 bp | CTAAGTGCTGGCATTGAAGGTGTGTGTCATGACGCCTaGCTGTTTCGCCATTTGTATAGTACCTGCTCTTTA | + |
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Preference number: 3 (lower is better) Translates to: LSAGIEGVCHDA*LFRHLYSTCSL Trigger: TAAAGAGCAGGTACTATACAAATGGCGAAACAGCCAGGCGTCATGACACACACCTTCAATGCCAGCACTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR TCA 72 bp | TCCACCTGTTATCTCACCTATATCTGTAGGTCTGCCTaGGGATTCCATAGCATACCCTTAACATTAGCGCCA | + |
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Preference number: 3 (lower is better) Translates to: STCYLTYICRSA*GFHSIPLTLAP Trigger: TGGCGCTAATGTTAAGGGTATGCTATGGAATCCTCAGGCAGACCTACAGATATAGGTGAGATAACAGGTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR TCA 72 bp | TTAAACAAAACAAAACCTCCCAGCAACCTTCAGTGCTaGAGTGAGAGGAACACTGAACAACAGGTGTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: LNKTKPPSNLQC*SERNTEQQVSG Trigger: GCCTGACACCTGTTGTTCAGTGTTCCTCTCACTTCAGCACTGAAGGTTGCTGGGAGGTTTTGTTTTGTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CCA 72 bp | ACTGCAGCCTGCCTTTCAGAGTCCCTGGATAAGTCATaGTCGATTCAACTAGAAACCTCTAGTACTACATGT | + |
|
Preference number: 3 (lower is better) Translates to: TAACLSESLDKS*SIQLETSSTTC Trigger: ACATGTAGTACTAGAGGTTTCTAGTTGAATCGACCATGACTTATCCAGGGACTCTGAAAGGCAGGCTGCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR CAA 90 bp | CTTGTTTGTAACAAGGGCCTCACTGGCTGCCATTCTGCCTACTATATAAATTGGTGTCCCATTTCTCTCTaGGTAGTTCATGGTTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LVCNKGLTGCHSAYYINWCPISL*VVHGFR Trigger: CCTGAAACCATGAACTACCAAGAGAGAAATGGGACA...CCAATTTATATAGTAGGCAGAATGGCAGCCAGTGAGGCCCTTGTTACAAACAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CCA 72 bp | TTCTGCCTACTATATAAATTGGCCTGCAAAGCTTCCTaGGACAAGTCTCTCATTCCTCTCCTGTATAGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: FCLLYKLACKAS*DKSLIPLLYRS Trigger: ACTCCTATACAGGAGAGGAATGAGAGACTTGTCCCAGGAAGCTTTGCAGGCCAATTTATATAGTAGGCAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR TCA 72 bp | AATACAAATTTAAAGAAAAGCATGCCCTGGCCTGGGTaGGCAAGTGTGGTGTGTGTTTGTGTTTGTGTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: NTNLKKSMPWPG*ASVVCVCVCVS Trigger: TGACACACAAACACAAACACACACCACACTTGCTCACCCAGGCCAGGGCATGCTTTTCTTTAAATTTGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR GCA 72 bp | CTGCTGTTTCCTGACACTGAATATCTGAAAACAAACTaGTCTGGACAGTTTCATCATCTAGAAAGAAAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: LLFPDTEYLKTN*SGQFHHLERKG Trigger: CCCCTTTCTTTCTAGATGATGAAACTGTCCAGAGCAGTTTGTTTTCAGATATTCAGTGTCAGGAAACAGCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR CAA 90 bp | CTTGTTTGTAACAAGGGCCTCACTGGCTGCCATTCTGCCTACTATATAAATTGGGTGGTCAAACAACCTTaGTTCTATACTCTGTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: LVCNKGLTGCHSAYYINWVVKQP*FYTLFI Trigger: AATGAACAGAGTATAGAACAAAGGTTGTTTGACCAC...CCAATTTATATAGTAGGCAGAATGGCAGCCAGTGAGGCCCTTGTTACAAACAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR TCA 72 bp | TGCAACCTGTTCCAGAACAAAATACAACCAATGCATTaGCCTGTATCGCTGCCTAAATGTATCTTTAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CNLFQNKIQPMH*PVSLPKCIFSL Trigger: CAGACTAAAGATACATTTAGGCAGCGATACAGGTCAATGCATTGGTTGTATTTTGTTCTGGAACAGGTTGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR TCA 72 bp | CACTTGTGTTGTCTCTGGGTAGTCTTTCTACAATACTaGGTGAGGTGTCTAGCAGAAACCTTAATAAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: HLCCLWVVFLQY*VRCLAETLIRR Trigger: TCTTCTTATTAAGGTTTCTGCTAGACACCTCACTCAGTATTGTAGAAAGACTACCCAGAGACAACACAAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR GCA 72 bp | CACAGTGCAACCTGTTCCAGAACAAAATACAACCAATaGATTGACCTGTATCGCTGCCTAAATGTATCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: HSATCSRTKYNQ*IDLYRCLNVSL Trigger: TAAAGATACATTTAGGCAGCGATACAGGTCAATGCATTGGTTGTATTTTGTTCTGGAACAGGTTGCACTGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR GCA 72 bp | CATGACGCCTGGCTGTTTCGCCATTTGTATAGTACCTaGTCTTTAGACAATAGGTCAACAACAAAGATAAAA | + |
|
Preference number: 3 (lower is better) Translates to: HDAWLFRHLYST*SLDNRSTTKIK Trigger: TTTTATCTTTGTTGTTGACCTATTGTCTAAAGAGCAGGTACTATACAAATGGCGAAACAGCCAGGCGTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CCA 72 bp | GCAAGCAACTGTGGTCAAATGTCTTGGTTTAATGTCTaGATTGTAAAGAGGCTCTCTGAATTTTTAGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ASNCGQMSWFNV*IVKRLSEFLGR Trigger: TCTCCCTAAAAATTCAGAGAGCCTCTTTACAATCCAGACATTAAACCAAGACATTTGACCACAGTTGCTTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CCA 72 bp | AACTTGCTAAAGGCAAGCAACTGTGGTCAAATGTCTTaGTTTAATGTCTGGATTGTAAAGAGGCTCTCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: NLLKASNCGQMS*FNVWIVKRLSE Trigger: TTCAGAGAGCCTCTTTACAATCCAGACATTAAACCAAGACATTTGACCACAGTTGCTTGCCTTTAGCAAGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR TCA 72 bp | CATAATGTATGCAGGCTTTGGAATGACAGTCACGGATaGAAACTGAGCAATTATGTGTTATGGTATTTAGTG | + |
|
Preference number: 3 (lower is better) Translates to: HNVCRLWNDSHG*KLSNYVLWYLV Trigger: CACTAAATACCATAACACATAATTGCTCAGTTTTCATCCGTGACTGTCATTCCAAAGCCTGCATACATTATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR-3UTR CAA 90 bp | CATGGACTACTGGATGGCAATTCTGAAGTTTCTGTTAAAATGCATTTAAAACAGATTGAGCATTTTCTGTaGGAAAGTTTCCCAAGTAAG | + |
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Preference number: 3 (lower is better) Translates to: HGLLDGNSEVSVKMHLKQIEHFL*ESFPSK Trigger: CTTACTTGGGAAACTTTCCAACAGAAAATGCTCAAT...CTGTTTTAAATGCATTTTAACAGAAACTTCAGAATTGCCATCCAGTAGTCCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| CDS-3UTR TCA 90 bp | TTCTACCATGTACCAGGTTTTTATATAGGTCCTAAGAATTTGAATCGGGTCCCTCCCAGCCGCGGAGGATaGCGCGCTCTTCGCCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FYHVPGFYIGPKNLNRVPPSRGG*RALRQG Trigger: CCCCTGGCGAAGAGCGCGTCATCCTCCGCGGCTGGG...AGGGACCCGATTCAAATTCTTAGGACCTATATAAAAACCTGGTACATGGTAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CAA 72 bp | CATGCCCTGGCCTGGGTGAGCAAGTGTGGTGTGTGTTaGTGTTTGTGTGTCACACTTGTGTTGTCTCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: HALAWVSKCGVC*CLCVTLVLSLG Trigger: ACCCAGAGACAACACAAGTGTGACACACAAACACAAACACACACCACACTTGCTCACCCAGGCCAGGGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CAA 72 bp | TCTGTAACCCTGTACTCAGGGAGGAGAAGCACAAGTTaGAGGCTAGAGTGGGCTACACAGTGCAACCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVTLYSGRRSTS*RLEWATQCNLF Trigger: GAACAGGTTGCACTGTGTAGCCCACTCTAGCCTCAAACTTGTGCTTCTCCTCCCTGAGTACAGGGTTACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| CDS-3UTR GCA 90 bp | CCATGTACTCTGTCTCCTGCAAATAAAGAATGCAAATTCACACTGGCATATTCAAGCCGCTGCTTCTGCTaGTGGAGACTGGTGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PCTLSPANKECKFTLAYSSRCFC*WRLVRP Trigger: CGGCCTCACCAGTCTCCAGCAGCAGAAGCAGCGGCT...TGAATATGCCAGTGTGAATTTGCATTCTTTATTTGCAGGAGACAGAGTACATGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| CDS-3UTR TCA 90 bp | CATGCTTGCATGACACACAAGTTAGCACTTAGCCACCTCCCCAGCCCAAGTTTTCACTACAACTCTCACTaGGTTCATGTTGCCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HACMTHKLALSHLPSPSFHYNSH*VHVAFA Trigger: TGCAAAGGCAACATGAACTCAGTGAGAGTTGTAGTG...AAAACTTGGGCTGGGGAGGTGGCTAAGTGCTAACTTGTGTGTCATGCAAGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| CDS-3UTR CCA 90 bp | GGCATTGAAGGTGTGTGTCATGACGCCTGGCTGTTTCGCCATTTGTATAGTACCCTGAAGATTCAGTTGTaGGAACTGGTAATGGCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GIEGVCHDAWLFRHLYSTLKIQL*ELVMAD Trigger: GTCTGCCATTACCAGTTCCCACAACTGAATCTTCAG...GGTACTATACAAATGGCGAAACAGCCAGGCGTCATGACACACACCTTCAATGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| CDS-3UTR CCA 90 bp | ATGGTGCATACCCAGCACGGGATAATCTTTATAGTCACAGGAATATGTCTTCCATCAGCTATACTGGAATaGGAGTTCCGGAGTGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: MVHTQHGIIFIVTGICLPSAILE*EFRSDS Trigger: CGAGTCACTCCGGAACTCCCATTCCAGTATAGCTGA...TGGAAGACATATTCCTGTGACTATAAAGATTATCCCGTGCTGGGTATGCACCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| CDS-3UTR GCA 90 bp | TTCTACCATGTACCAGGTTTTTATATAGGTCCTAAGAATTTGAATCGGGTCCCTGCAGACTTGAAAGGATaGCAAATGAAGGCGCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: FYHVPGFYIGPKNLNRVPADLKG*QMKAPR Trigger: CCGTGGCGCCTTCATTTGGCATCCTTTCAAGTCTGC...AGGGACCCGATTCAAATTCTTAGGACCTATATAAAAACCTGGTACATGGTAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| 3UTR CAA 72 bp | TACCAGTACACTCAGAAGTCTCTGAATGCCCCCAAGTaGGTCACAAATGTGAAACATGACTCCACCTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: YQYTQKSLNAPK*VTNVKHDSTCY Trigger: ATAACAGGTGGAGTCATGTTTCACATTTGTGACCAACTTGGGGGCATTCAGAGACTTCTGAGTGTACTGGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| CDS-3UTR CCA 90 bp | ATGGTGCATACCCAGCACGGGATAATCTTTATAGTCACAGGAATATGTCTTCCACCTGTTAGCTTCTGGTaGAGGATATGGAGGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: MVHTQHGIIFIVTGICLPPVSFW*RIWRKK Trigger: TTTCTTCCTCCATATCCTCCACCAGAAGCTAACAGG...TGGAAGACATATTCCTGTGACTATAAAGATTATCCCGTGCTGGGTATGCACCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| CDS-3UTR TCA 90 bp | CCATGTACTCTGTCTCCTGCAAATAAAGAATGCAAATTCACACTGGCATATTCATTGGTTAACCGATGCTaGAGATTCAGTTGTGGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PCTLSPANKECKFTLAYSLVNRC*RFSCGN Trigger: GTTCCCACAACTGAATCTTCAGCATCGGTTAACCAA...TGAATATGCCAGTGTGAATTTGCATTCTTTATTTGCAGGAGACAGAGTACATGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| CDS-3UTR CCA 90 bp | TCTCTGAATGCCCCCAAGTTGGTCACAAATGTGAAACATGACTCCACCTGTTATTTAGCTCTTCTACAGTaGCAAATTGTTCTCTTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLNAPKLVTNVKHDSTCYLALLQ*QIVLFS Trigger: GGAAAAGAGAACAATTTGCCACTGTAGAAGAGCTAA...ATAACAGGTGGAGTCATGTTTCACATTTGTGACCAACTTGGGGGCATTCAGAGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| CDS-3UTR CCA 90 bp | TTTTGTTCCCTCCATCCCTTTACAAGACATAATTTAGGTATGTTCATGGAGTCAGTATTTCAGCTATACTaGAATGGGAGTTCCGGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: FCSLHPFTRHNLGMFMESVFQLY*NGSSGV Trigger: CACTCCGGAACTCCCATTCCAGTATAGCTGAAATAC...TGACTCCATGAACATACCTAAATTATGTCTTGTAAAGGGATGGAGGGAACAAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| CDS-3UTR CAA 90 bp | CATGCTTGCATGACACACAAGTTAGCACTTAGCCACCTCCCCAGCCCAAGTTTTATGCTGAAGATTCAGTaGTGGGAACTGGTAATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: HACMTHKLALSHLPSPSFMLKIQ*WELVMA Trigger: TGCCATTACCAGTTCCCACAACTGAATCTTCAGCAT...AAAACTTGGGCTGGGGAGGTGGCTAAGTGCTAACTTGTGTGTCATGCAAGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| CDS-3UTR CAA 90 bp | GTTTGTAACAAGGGCCTCACTGGCTGCCATTCTGCCTACTATATAAATTGGCCTGAGTTCATGTTGCCTTaGCATCTTCTTTTCAAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VCNKGLTGCHSAYYINWPEFMLP*HLLFKG Trigger: ACCTTTGAAAAGAAGATGCAAAGGCAACATGAACTC...AGGCCAATTTATATAGTAGGCAGAATGGCAGCCAGTGAGGCCCTTGTTACAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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| CDS-3UTR CAA 90 bp | TTTTGTTCCCTCCATCCCTTTACAAGACATAATTTAGGTATGTTCATGGAGTCACAGTGTAACTTGTGGTaGAAGAAGAAACAGTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: FCSLHPFTRHNLGMFMESQCNLW*KKKQCQ Trigger: CTGACACTGTTTCTTCTTCAACCACAAGTTACACTG...TGACTCCATGAACATACCTAAATTATGTCTTGTAAAGGGATGGAGGGAACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098817.4 |
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