Pregenerated sensors for VPS35L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030982Ensembl transcript IDs: ENSMUST00000033280.14, ENSMUST00000059390.13, ENSMUST00000106552.8, ENSMUST00000106553.8, ENSMUST00000149749.3, ENSMUST00000175922.8
Found 389 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCTGAACCTTGGCTGCTCTCCATCAGTGCCCACAGATCCCCGGGCTaGGAACCAGAAGCCTTGCCAACACACACCGAGACACTGCTATCT | + |
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Preference number: 1 (lower is better) Translates to: PEPWLLSISAHRSPG*EPEALPTHTETLLS Trigger: AGATAGCAGTGTCTCGGTGTGTGTTGGCAAGGCTTCTGGTTCCCAGCCCGGGGATCTGTGGGCACTGATGGAGAGCAGCCAAGGTTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR TCA 90 bp | GGCTGCTATTCAGCAAATGGAAATACCCTTCAGAAAAGAAAGCCCTaGACCTTGGCTGCTCTCCATCAGTGCCCACAGATCCCCGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: GCYSANGNTLQKRKP*TLAALHQCPQIPGL Trigger: CAGCCCGGGGATCTGTGGGCACTGATGGAGAGCAGCCAAGGTTCAGGGCTTTCTTTTCTGAAGGGTATTTCCATTTGCTGAATAGCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR GCA 90 bp | AGCAAATGGAAATACCCTTCAGAAAAGAAAGCCCTGAACCTTGGCTaGTCTCCATCAGTGCCCACAGATCCCCGGGCTGGGAACCAGAAG | + |
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Preference number: 1 (lower is better) Translates to: SKWKYPSEKKALNLG*SPSVPTDPRAGNQK Trigger: CTTCTGGTTCCCAGCCCGGGGATCTGTGGGCACTGATGGAGAGCAGCCAAGGTTCAGGGCTTTCTTTTCTGAAGGGTATTTCCATTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR CCA 90 bp | CTCCTGTCTCTACCTCCTAACTACTGCCGTTCTAGGTCTGCACCTTaGCACTCTGTCTTATGTGGGGTCTTGTGTCTGCCAGGCAAGCAT | + |
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Preference number: 1 (lower is better) Translates to: LLSLPPNYCRSRSAP*HSVLCGVLCLPGKH Trigger: ATGCTTGCCTGGCAGACACAAGACCCCACATAAGACAGAGTGCCAAGGTGCAGACCTAGAACGGCAGTAGTTAGGAGGTAGAGACAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR GCA 90 bp | CTGGGCCATGGAGTGAGTAGATCTGCCTGTCACACATTCCTGCCTTaGCACAGGCCCATGAAGTGGAAACTTCAGGGTTCTTTGGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: LGHGVSRSACHTFLP*HRPMKWKLQGSLES Trigger: ACTTTCCAAAGAACCCTGAAGTTTCCACTTCATGGGCCTGTGGCAAGGCAGGAATGTGTGACAGGCAGATCTACTCACTCCATGGCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
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| 3UTR CCA 90 bp | ATTCAGCAAATGGAAATACCCTTCAGAAAAGAAAGCCCTGAACCTTaGCTGCTCTCCATCAGTGCCCACAGATCCCCGGGCTGGGAACCA | + |
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Preference number: 1 (lower is better) Translates to: IQQMEIPFRKESPEP*LLSISAHRSPGWEP Trigger: TGGTTCCCAGCCCGGGGATCTGTGGGCACTGATGGAGAGCAGCCAAGGTTCAGGGCTTTCTTTTCTGAAGGGTATTTCCATTTGCTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR TCA 90 bp | TGGAAAGTCGGTTGTGTCAGATGGTGTTTTGCTGCGGTAAACACGTaGAGGAGAGGTTTCCTGAAGTGGACACAGGTGAAAGGCTACGGC | + |
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Preference number: 1 (lower is better) Translates to: WKVGCVRWCFAAVNT*RRGFLKWTQVKGYG Trigger: GCCGTAGCCTTTCACCTGTGTCCACTTCAGGAAACCTCTCCTTCACGTGTTTACCGCAGCAAAACACCATCTGACACAACCGACTTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
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| 3UTR CCA 90 bp | AGATCTGCCTGTCACACATTCCTGCCTTGCCACAGGCCCATGAAGTaGAAACTTCAGGGTTCTTTGGAAAGTCGGTTGTGTCAGATGGTG | + |
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Preference number: 1 (lower is better) Translates to: RSACHTFLPCHRPMK*KLQGSLESRLCQMV Trigger: CACCATCTGACACAACCGACTTTCCAAAGAACCCTGAAGTTTCCACTTCATGGGCCTGTGGCAAGGCAGGAATGTGTGACAGGCAGATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
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| 3UTR TCA 90 bp | GTGCCCAGCAGTGTGTGGATCTGGATGTGCTTGCTAAGTCAGAAGTaGTCAGCCAACAGCTGGAAACAGCTGATTTTCATAGCCCAGGTT | + |
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Preference number: 1 (lower is better) Translates to: VPSSVWIWMCLLSQK*SANSWKQLIFIAQV Trigger: AACCTGGGCTATGAAAATCAGCTGTTTCCAGCTGTTGGCTGATCACTTCTGACTTAGCAAGCACATCCAGATCCACACACTGCTGGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR CCA 90 bp | GCCTTGCCAACACACACCGAGACACTGCTATCTAAAGAACAAGACTaGGTTTTAATGTTCTGTCGATTCCCCTTCTGCTGTCAGAATAGC | + |
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Preference number: 1 (lower is better) Translates to: ALPTHTETLLSKEQD*VLMFCRFPFCCQNS Trigger: GCTATTCTGACAGCAGAAGGGGAATCGACAGAACATTAAAACCCAGTCTTGTTCTTTAGATAGCAGTGTCTCGGTGTGTGTTGGCAAGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR TCA 90 bp | CTAAATCCAAATGTGCTACGTATGGCTGAAAAAGAGTGGGCAAGCTaGCATTATTCCCCAAGGTGTTTAATAGGAGACTGTCTCTACCCT | + |
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Preference number: 1 (lower is better) Translates to: LNPNVLRMAEKEWAS*HYSPRCLIGDCLYP Trigger: AGGGTAGAGACAGTCTCCTATTAAACACCTTGGGGAATAATGTCAGCTTGCCCACTCTTTTTCAGCCATACGTAGCACATTTGGATTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR-3UTR GCA 90 bp | CCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACACAAGCTGTGGCCCTGAACCTTGGCTaGTCTCCATCAGTGCCCACA | + |
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Preference number: 2 (lower is better) Translates to: PPPPGCNSALKLVKTQAVALNLG*SPSVPT Trigger: TGTGGGCACTGATGGAGAGCAGCCAAGGTTCAGGGC...CACAGCTTGTGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR-3UTR CCA 90 bp | AGGCGTGCACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACAAGATCTTCCAGGATGTaGCACTGGGACTCCCGAAAG | + |
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Preference number: 2 (lower is better) Translates to: RRAPPPPGCNSALKLVKTRSSRM*HWDSRK Trigger: CTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCT...TGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTGCACGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR-3UTR CCA 90 bp | CCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACACAAGCTGTGGAAAGCCCTGAACCTTaGCTGCTCTCCATCAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: PPPPGCNSALKLVKTQAVESPEP*LLSISA Trigger: GGCACTGATGGAGAGCAGCCAAGGTTCAGGGCTTTC...CACAGCTTGTGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR-3UTR CCA 90 bp | AGGCGTGCACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACAGTGCCCAGCAGTGTGTaGATCTGGATGTGCTTGCTA | + |
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Preference number: 2 (lower is better) Translates to: RRAPPPPGCNSALKLVKTVPSSV*IWMCLL Trigger: TAGCAAGCACATCCAGATCCACACACTGCTGGGCAC...TGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTGCACGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR-3UTR CCA 90 bp | TGCCTGTCACACATTCCTGCCTTGCCACAGGCCCATGAAGTGGAAACTTCAGGGAGAGGTTTCCTGAAGTaGACACAGGTGAAAGGCTAC | + |
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Preference number: 2 (lower is better) Translates to: CLSHIPALPQAHEVETSGRGFLK*TQVKGY Trigger: GTAGCCTTTCACCTGTGTCCACTTCAGGAAACCTCT...CCCTGAAGTTTCCACTTCATGGGCCTGTGGCAAGGCAGGAATGTGTGACAGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTCATCTGGTGTGTGTTTTGCCCTaGCTAGTTTTGAGCAACCCT | + |
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Preference number: 2 (lower is better) Translates to: CVCQASIPLTEPYPSPHLVCVLP*LVLSNP Trigger: AGGGTTGCTCAAAACTAGTCAGGGCAAAACACACAC...CAGATGAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR CAA 90 bp | CACAGGCCCATGAAGTGGAAACTTCAGGGTTCTTTGGAAAGTCGGTaGTGTCAGATGGTGTTTTGCTGCGGTAAACACGTGAAGGAGAGG | + |
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Preference number: 2 (lower is better) Translates to: HRPMKWKLQGSLESR*CQMVFCCGKHVKER Trigger: CCTCTCCTTCACGTGTTTACCGCAGCAAAACACCATCTGACACAACCGACTTTCCAAAGAACCCTGAAGTTTCCACTTCATGGGCCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
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| 3UTR CAA 90 bp | TTCCTGCCTTGCCACAGGCCCATGAAGTGGAAACTTCAGGGTTCTTaGGAAAGTCGGTTGTGTCAGATGGTGTTTTGCTGCGGTAAACAC | + |
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Preference number: 2 (lower is better) Translates to: FLPCHRPMKWKLQGS*ESRLCQMVFCCGKH Trigger: GTGTTTACCGCAGCAAAACACCATCTGACACAACCGACTTTCCAAAGAACCCTGAAGTTTCCACTTCATGGGCCTGTGGCAAGGCAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
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| 3UTR-3UTR GCA 90 bp | GTTTTTGAGACTGGGGCTCATATATCCCAGACCAGCTTCAAACATGTAACTGGGAAATCCACCTGCCTCTaGCTCTGCCTCCCAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: VFETGAHISQTSFKHVTGKSTCL*LCLPSA Trigger: AGCACTTGGGAGGCAGAGGCAGAGGCAGGTGGATTT...CCCAGTTACATGTTTGAAGCTGGTCTGGGATATATGAGCCCCAGTCTCAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR CAA 90 bp | TCCCAGACCAGCTTCAAACATGTAACTGGGGACCTTGATCAGATCTaGATCCTCCTGTCTCTACCTCCTAACTACTGCCGTTCTAGGTCT | + |
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Preference number: 2 (lower is better) Translates to: SQTSFKHVTGDLDQI*ILLSLPPNYCRSRS Trigger: AGACCTAGAACGGCAGTAGTTAGGAGGTAGAGACAGGAGGATCAAGATCTGATCAAGGTCCCCAGTTACATGTTTGAAGCTGGTCTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR-3UTR TCA 90 bp | GTTTTTGAGACTGGGGCTCATATATCCCAGACCAGCTTCAAACATGTAACTGGGAAGCATTCCACTGACTaGGCCATATCCTTCGCCTCA | + |
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Preference number: 2 (lower is better) Translates to: VFETGAHISQTSFKHVTGKHSTD*AISFAS Trigger: TGAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTT...CCCAGTTACATGTTTGAAGCTGGTCTGGGATATATGAGCCCCAGTCTCAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTAGATCTTCCAGGATGTaGCACTGGGACTCCCGAAAG | + |
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Preference number: 2 (lower is better) Translates to: PFCCQNSQVEGKSLKPICRSSRM*HWDSRK Trigger: CTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCT...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| 3UTR-3UTR GCA 90 bp | GAAATAAAGGCCATTTGGGAGTATTTGAACAGCACCATAGTGCATTCTGGGTTCGAAGCACTGCCTAAGTaGCCAGCAGTGTGTGGATCT | + |
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Preference number: 2 (lower is better) Translates to: EIKAIWEYLNSTIVHSGFEALPK*PAVCGS Trigger: AGATCCACACACTGCTGGGCACTTAGGCAGTGCTTC...GAACCCAGAATGCACTATGGTGCTGTTCAAATACTCCCAAATGGCCTTTATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR-3UTR TCA 90 bp | GAAATAAAGGCCATTTGGGAGTATTTGAACAGCACCATAGTGCATTCTGGGTTCTGGGCATTTCTACTGTaGCTATCAGGAGTCTCAGAT | + |
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Preference number: 2 (lower is better) Translates to: EIKAIWEYLNSTIVHSGFWAFLL*LSGVSD Trigger: ATCTGAGACTCCTGATAGTCACAGTAGAAATGCCCA...GAACCCAGAATGCACTATGGTGCTGTTCAAATACTCCCAAATGGCCTTTATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR-3UTR TCA 90 bp | GAAATAAAGGCCATTTGGGAGTATTTGAACAGCACCATAGTGCATTCTGGGTTCATCAGGAGTCTCAGATaGGACCTCAGTTTCTCTTAT | + |
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Preference number: 2 (lower is better) Translates to: EIKAIWEYLNSTIVHSGFIRSLR*DLSFSY Trigger: ATAAGAGAAACTGAGGTCTCATCTGAGACTCCTGAT...GAACCCAGAATGCACTATGGTGCTGTTCAAATACTCCCAAATGGCCTTTATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR-3UTR GCA 90 bp | GAAATAAAGGCCATTTGGGAGTATTTGAACAGCACCATAGTGCATTCTGGGTTCACTCATGGCATCCTCTaGTTCTTTCTCTTAAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: EIKAIWEYLNSTIVHSGFTHGIL*FFLLSA Trigger: AGCACTTAAGAGAAAGAAGCAGAGGATGCCATGAGT...GAACCCAGAATGCACTATGGTGCTGTTCAAATACTCCCAAATGGCCTTTATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR TCA 72 bp | CTGCCTGTCACACATTCCTGCCTTGCCACAGGCCCATaGAGTGGAAACTTCAGGGTTCTTTGGAAAGTCGGT | + |
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Preference number: 3 (lower is better) Translates to: LPVTHSCLATGP*SGNFRVLWKVG Trigger: ACCGACTTTCCAAAGAACCCTGAAGTTTCCACTTCATGGGCCTGTGGCAAGGCAGGAATGTGTGACAGGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
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| 3UTR TCA 72 bp | AGCCCTTTGTTCCTCTTCTACTTCTGGGCCATGGAGTaGGTAGATCTGCCTGTCACACATTCCTGCCTTGCC | + |
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Preference number: 3 (lower is better) Translates to: SPLFLFYFWAME*VDLPVTHSCLA Trigger: GGCAAGGCAGGAATGTGTGACAGGCAGATCTACTCACTCCATGGCCCAGAAGTAGAAGAGGAACAAAGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
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| 3UTR GCA 72 bp | GGAGTGAGTAGATCTGCCTGTCACACATTCCTGCCTTaGCACAGGCCCATGAAGTGGAAACTTCAGGGTTCT | + |
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Preference number: 3 (lower is better) Translates to: GVSRSACHTFLP*HRPMKWKLQGS Trigger: AGAACCCTGAAGTTTCCACTTCATGGGCCTGTGGCAAGGCAGGAATGTGTGACAGGCAGATCTACTCACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
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| 3UTR CCA 72 bp | CTACCTCCTAACTACTGCCGTTCTAGGTCTGCACCTTaGCACTCTGTCTTATGTGGGGTCTTGTGTCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: LPPNYCRSRSAP*HSVLCGVLCLP Trigger: TGGCAGACACAAGACCCCACATAAGACAGAGTGCCAAGGTGCAGACCTAGAACGGCAGTAGTTAGGAGGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR GCA 72 bp | GCAATCAAGGGCAGTTATAAGCTCACTCAGAAGCACTaGCTAAGTGCCCAGCAGTGTGTGGATCTGGATGTG | + |
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Preference number: 3 (lower is better) Translates to: AIKGSYKLTQKH*LSAQQCVDLDV Trigger: CACATCCAGATCCACACACTGCTGGGCACTTAGGCAGTGCTTCTGAGTGAGCTTATAACTGCCCTTGATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR CCA 72 bp | TGTCACACATTCCTGCCTTGCCACAGGCCCATGAAGTaGAAACTTCAGGGTTCTTTGGAAAGTCGGTTGTGT | + |
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Preference number: 3 (lower is better) Translates to: CHTFLPCHRPMK*KLQGSLESRLC Trigger: ACACAACCGACTTTCCAAAGAACCCTGAAGTTTCCACTTCATGGGCCTGTGGCAAGGCAGGAATGTGTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
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| 3UTR-3UTR CAA 90 bp | TGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTCATCTGAATTGTATCAATTCCTaGGGCTGGAGGGTATTCTCA | + |
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Preference number: 3 (lower is better) Translates to: CVCQASIPLTEPYPSPHLNCINS*GWRVFS Trigger: TGAGAATACCCTCCAGCCCAAGGAATTGATACAATT...CAGATGAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR TCA 72 bp | CCTCTATGCCCCATAGGTTACTGGGCATTTCTACTGTaGCTATCAGGAGTCTCAGATGAGACCTCAGTTTCT | + |
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Preference number: 3 (lower is better) Translates to: PLCPIGYWAFLL*LSGVSDETSVS Trigger: AGAAACTGAGGTCTCATCTGAGACTCCTGATAGTCACAGTAGAAATGCCCAGTAACCTATGGGGCATAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR TCA 72 bp | TATGTGCCACCAGGGCAGTATAGCCTGAAACACAGCTaGGCCAAACTTGGATGTATTTTCACAGGCAGTAGT | + |
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Preference number: 3 (lower is better) Translates to: YVPPGQYSLKHS*AKLGCIFTGSS Trigger: ACTACTGCCTGTGAAAATACATCCAAGTTTGGCTCAGCTGTGTTTCAGGCTATACTGCCCTGGTGGCACATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR GCA 72 bp | TGTGTGTGTTTTGCCCTGACTAGTTTTGAGCAACCCTaGTTCCACCTCCCAAGTAGCTGCAACTTGAAGTAT | + |
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Preference number: 3 (lower is better) Translates to: CVCFALTSFEQP*FHLPSSCNLKY Trigger: ATACTTCAAGTTGCAGCTACTTGGGAGGTGGAAGCAGGGTTGCTCAAAACTAGTCAGGGCAAAACACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR GCA 72 bp | TCTTTGGAAAGTCGGTTGTGTCAGATGGTGTTTTGCTaGGGTAAACACGTGAAGGAGAGGTTTCCTGAAGTG | + |
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Preference number: 3 (lower is better) Translates to: SLESRLCQMVFC*GKHVKERFPEV Trigger: CACTTCAGGAAACCTCTCCTTCACGTGTTTACCGCAGCAAAACACCATCTGACACAACCGACTTTCCAAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
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| 3UTR GCA 72 bp | TGTCTCTACCCTAAGAGTGTGTGTGCAACTGGGGGCTaGTATTCAGCAAATGGAAATACCCTTCAGAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: CLYPKSVCATGG*YSANGNTLQKR Trigger: TCTTTTCTGAAGGGTATTTCCATTTGCTGAATAGCAGCCCCCAGTTGCACACACACTCTTAGGGTAGAGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR TCA 72 bp | AGTGTGTGGATCTGGATGTGCTTGCTAAGTCAGAAGTaGTCAGCCAACAGCTGGAAACAGCTGATTTTCATA | + |
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Preference number: 3 (lower is better) Translates to: SVWIWMCLLSQK*SANSWKQLIFI Trigger: TATGAAAATCAGCTGTTTCCAGCTGTTGGCTGATCACTTCTGACTTAGCAAGCACATCCAGATCCACACACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR CCA 72 bp | ACACACACCGAGACACTGCTATCTAAAGAACAAGACTaGGTTTTAATGTTCTGTCGATTCCCCTTCTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: THTETLLSKEQD*VLMFCRFPFCC Trigger: ACAGCAGAAGGGGAATCGACAGAACATTAAAACCCAGTCTTGTTCTTTAGATAGCAGTGTCTCGGTGTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| 3UTR TCA 72 bp | AATGTGCTACGTATGGCTGAAAAAGAGTGGGCAAGCTaGCATTATTCCCCAAGGTGTTTAATAGGAGACTGT | + |
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Preference number: 3 (lower is better) Translates to: NVLRMAEKEWAS*HYSPRCLIGDC Trigger: ACAGTCTCCTATTAAACACCTTGGGGAATAATGTCAGCTTGCCCACTCTTTTTCAGCCATACGTAGCACATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| CDS-3UTR GCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGAGGCTCTCCTTGAGGTaGGGGGCCACTTCGATCCCC | + |
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Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKRLSLR*GATSIP Trigger: GGGGATCGAAGTGGCCCCGCACCTCAAGGAGAGCCT...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
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| CDS-3UTR CCA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTCCCTGGGCCACCAGCTaGTTCTGGACAGTGTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: GSQADLPGCGTGTPERQVPWATS*FWTVSP Trigger: TGGGGACACTGTCCAGAACCAGCTGGTGGCCCAGGG...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
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| CDS-3UTR CCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGCCCTGGGCCACCAGCTaGTTCTGGACAGTGTCCCCA | + |
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Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKPWATS*FWTVSP Trigger: TGGGGACACTGTCCAGAACCAGCTGGTGGCCCAGGG...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
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| CDS-3UTR CCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGAGCAGCTCCACACCCTaGGCCACCAGCTGGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKSSSTP*ATSWFW Trigger: CCAGAACCAGCTGGTGGCCCAGGGTGTGGAGCTGCT...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
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| CDS-3UTR CCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGGGGAGAGGCACTGGTTaGCCAAGGCAACCTGACCGG | + |
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Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKGRGTG*PRQPDR Trigger: CCGGTCAGGTTGCCTTGGCCAACCAGTGCCTCTCCC...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR CCA 90 bp | GACTCAGCAGTGCTTCTGGCTAGCGACAGAACTGCAGCCCAAGGCAATCAAGGGCTGCCGGGTCCGAGGTaGCTGCAAACATGGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: DSAVLLASDRTAAQGNQGLPGPR*LQTWRA Trigger: CGCTCTCCATGTTTGCAGCCACCTCGGACCCGGCAG...CCCTTGATTGCCTTGGGCTGCAGTTCTGTCGCTAGCCAGAAGCACTGCTGAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| CDS-3UTR GCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGTGGAGAGCGGGTCGGTaGCATCGAGGACGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERWRAGR*HRGRCS Trigger: TGAGCAGCGTCCTCGATGGCACCGACCCGCTCTCCA...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR CCA 90 bp | TGCCTGTCACACATTCCTGCCTTGCCACAGGCCCATGAAGTGGAAACTTCAGGGCTGCCGGGTCCGAGGTaGCTGCAAACATGGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: CLSHIPALPQAHEVETSGLPGPR*LQTWRA Trigger: CGCTCTCCATGTTTGCAGCCACCTCGGACCCGGCAG...CCCTGAAGTTTCCACTTCATGGGCCTGTGGCAAGGCAGGAATGTGTGACAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
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| CDS-3UTR TCA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTGGTCTCCGATCCCTCTaGTCATGCAGGTTAGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSQADLPGCGTGTPERQVGLRSL*SCRLVG Trigger: CCCGACTAACCTGCATGATCAGAGGGATCGGAGACC...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR TCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGGGCCGATGGCGGCTTTaGAGAAAGCATCAGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKGRWRL*RKHQLG Trigger: CCCAAGCTGATGCTTTCTTCAAAGCCGCCATCGGCC...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR TCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGAGGTGCTCCAGGATCTaGGCCATCACAGCCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKRCSRI*AITASH Trigger: GTGTGAGGCTGTGATGGCTCAGATCCTGGAGCACCT...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR TCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTCTGGAGCTGTCTGTaGCTGTTCCTGTGGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKFWSCL*LFLWLP Trigger: CGGCAGCCACAGGAACAGTCACAGACAGCTCCAGAA...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR CCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGGGAAGATCCAGCCCATaGCAGGCGAGTACAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKGRSSP*QASTEG Trigger: TCCCTCTGTACTCGCCTGCCATGGGCTGGATCTTCC...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
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| CDS-3UTR CCA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTGGAAGATCCAGCCCATaGCAGGCGAGTACAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSQADLPGCGTGTPERQVGRSSP*QASTEG Trigger: TCCCTCTGTACTCGCCTGCCATGGGCTGGATCTTCC...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
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| CDS-3UTR TCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGGGCCGATGGCGGCTTTaGAGAAAGCATCAGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERGRWRL*RKHQLG Trigger: CCCAAGCTGATGCTTTCTTCAAAGCCGCCATCGGCC...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR TCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGAGGTGCTCCAGGATCTaGGCCATCACAGCCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERRCSRI*AITASH Trigger: GTGTGAGGCTGTGATGGCTCAGATCCTGGAGCACCT...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR TCA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTGGGCTAGGATGCTATTaGAGAAGGAGAGGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSQADLPGCGTGTPERQVGLGCY*RRRGPA Trigger: TGCTGGGCCTCTCCTTCTTCAATAGCATCCTAGCCC...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR TCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGGGGCTAGGATGCTATTaGAGAAGGAGAGGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKGLGCY*RRRGPA Trigger: TGCTGGGCCTCTCCTTCTTCAATAGCATCCTAGCCC...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR TCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGCCTCAGGGCCAGCTCTaGCAGATGATTCATGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKPQGQL*QMIHVR Trigger: CCTGACATGAATCATCTGTCAGAGCTGGCCCTGAGG...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR CCA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTGACAGGGTCCTTGGTTaGCTCCTGCTGGTGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GSQADLPGCGTGTPERQVDRVLG*LLLVLD Trigger: ATCAAGCACCAGCAGGAGCCAACCAAGGACCCTGTC...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 |
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| CDS-3UTR CCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTCTCAGCCAGGAACTTaGAGTCTCCCCCGTACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKSQPGT*SLPRTS Trigger: GCTTGTACGGGGGAGACTCCAAGTTCCTGGCTGAGA...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR TCA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTCAACGAACTCAGCCCTaGAAGCTGACATCACGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSQADLPGCGTGTPERQVQRTQP*KLTSRS Trigger: ACTCCGTGATGTCAGCTTTCAGGGCTGAGTTCGTTG...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR CCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGGTACACGGACACGAGTaGGTCTCCGATCCCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERVHGHE*VSDPSD Trigger: ATCAGAGGGATCGGAGACCCACTCGTGTCCGTGTAC...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR CCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGAAGAAAGCATCAGCTTaGGAGAGGCACTGGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKKKASA*ERHWLA Trigger: GGCCAACCAGTGCCTCTCCCAAGCTGATGCTTTCTT...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR CCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGTCTCAGCCAGGAACTTaGAGTCTCCCCCGTACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERSQPGT*SLPRTS Trigger: GCTTGTACGGGGGAGACTCCAAGTTCCTGGCTGAGA...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR CCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTCAGAGCCTCGTCTTTaGCCAGGGTTTTCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKSEPRL*PGFSGA Trigger: AGCACCTGAAAACCCTGGCCAAAGACGAGGCTCTGA...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR CCA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTTCAGAGCCTCGTCTTTaGCCAGGGTTTTCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSQADLPGCGTGTPERQVSEPRL*PGFSGA Trigger: AGCACCTGAAAACCCTGGCCAAAGACGAGGCTCTGA...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR TCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCTCAGCCCTGAAAGCTaGCATCACGGAGTTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERLSPES*HHGVQQ Trigger: CTGTTGAACTCCGTGATGTCAGCTTTCAGGGCTGAG...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR TCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAACGAACTCAGCCCTaGAAGCTGACATCACGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERQRTQP*KLTSRS Trigger: ACTCCGTGATGTCAGCTTTCAGGGCTGAGTTCGTTG...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR TCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTGGGCGATGACTTTCTaGATGATTGACTGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKWAMTF*MIDWSW Trigger: CCAGCTCCAGTCAATCATTCAGAAAGTCATCGCCCA...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR TCA 90 bp | ACTCACTCTGTAGACCAACCTGACCTTGAACTCAGAAATCCACCTGCCTCTGCCGGCCGATGGCGGCTTTaGAGAAAGCATCAGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: THSVDQPDLELRNPPASAGRWRL*RKHQLG Trigger: CCCAAGCTGATGCTTTCTTCAAAGCCGCCATCGGCC...GGCAGAGGCAGGTGGATTTCTGAGTTCAAGGTCAGGTTGGTCTACAGAGTGAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| CDS-3UTR TCA 90 bp | AGGCGTGCACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACAAGGTGCTCCAGGATCTaGGCCATCACAGCCTCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RRAPPPPGCNSALKLVKTRCSRI*AITASH Trigger: GTGTGAGGCTGTGATGGCTCAGATCCTGGAGCACCT...TGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTGCACGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| CDS-3UTR TCA 90 bp | TGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTCATCTGCCTCAGGGCCAGCTCTaGCAGATGATTCATGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CVCQASIPLTEPYPSPHLPQGQL*QMIHVR Trigger: CCTGACATGAATCATCTGTCAGAGCTGGCCCTGAGG...CAGATGAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
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| CDS-3UTR GCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGGAACGAAAAAGGAGATaGTTGGGGAAGCCGGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERERKRR*LGKPDS Trigger: CGAGTCCGGCTTCCCCAAGCATCTCCTTTTTCGTTC...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR GCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAGCCTCACACAGCTTaGTGTTCTCAGCCAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERQPHTA*CSQPGT Trigger: AGTTCCTGGCTGAGAACAGCAAGCTGTGTGAGGCTG...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR GCA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTTGTCTCTGTGCCAGGTaGCATAGGTTGACAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: GSQADLPGCGTGTPERQVCLCAR*HRLTES Trigger: ACTCTCTGTCAACCTATGGCACCTGGCACAGAGACA...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS-3UTR GCA 90 bp | AGGCCCATGAAGTGGAAACTTCAGGGTTCTTTGGAAAGTCGGTTGTGTCAGATGTGGAGAGCGGGTCGGTaGCATCGAGGACGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RPMKWKLQGSLESRLCQMWRAGR*HRGRCS Trigger: TGAGCAGCGTCCTCGATGGCACCGACCCGCTCTCCA...CATCTGACACAACCGACTTTCCAAAGAACCCTGAAGTTTCCACTTCATGGGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
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| CDS-3UTR CCA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTTCAGGCATGTCTCCTTaGCTGTGTCGTTCACGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSQADLPGCGTGTPERQVSGMSP*LCRSRS Trigger: AGAACGTGAACGACACAGCCAAGGAGACATGCCTGA...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | AGGCGTGCACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACAGGAAGATCCAGCCCATaGCAGGCGAGTACAGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRAPPPPGCNSALKLVKTGRSSP*QASTEG Trigger: TCCCTCTGTACTCGCCTGCCATGGGCTGGATCTTCC...TGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTGCACGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGGAAAAAGGAGATGCTTaGGGAAGCCGGACTCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPEREKGDA*GSRTRH Trigger: GTGACGAGTCCGGCTTCCCCAAGCATCTCCTTTTTC...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGAAGAAAGCATCAGCTTaGGAGAGGCACTGGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERKKASA*ERHWLA Trigger: GGCCAACCAGTGCCTCTCCCAAGCTGATGCTTTCTT...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | CCTTGCCACAGGCCCATGAAGTGGAAACTTCAGGGTTCTTTGGAAAGTCGGTTGAGGTGGCTGCAAACATaGAGAGCGGGTCGGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PCHRPMKWKLQGSLESRLRWLQT*RAGRCH Trigger: ATGGCACCGACCCGCTCTCCATGTTTGCAGCCACCT...CAACCGACTTTCCAAAGAACCCTGAAGTTTCCACTTCATGGGCCTGTGGCAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTTTCAGCAGCTCCTTCTaGGATCCCTCCTCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSQADLPGCGTGTPERQVFSSSF*DPSSKS Trigger: TGACTTTGAGGAGGGATCCCAGAAGGAGCTGCTGAA...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTCATCTGCTCAGCCCTGAAAGCTaGCATCACGGAGTTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: CVCQASIPLTEPYPSPHLLSPES*HHGVQQ Trigger: CTGTTGAACTCCGTGATGTCAGCTTTCAGGGCTGAG...CAGATGAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR TCA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTGACTTTCTGAATGATTaGCTGGAGCTGGGGGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: GSQADLPGCGTGTPERQVDFLND*LELGVR Trigger: TCTTACCCCCAGCTCCAGTCAATCATTCAGAAAGTC...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGTGGGCGATGACTTTCTaGATGATTGACTGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERWAMTF*MIDWSW Trigger: CCAGCTCCAGTCAATCATTCAGAAAGTCATCGCCCA...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGAGTCCTGGATCACGTTaGGAAGTTCTCGAACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKSPGSR*EVLEPE Trigger: TTCTGGTTCGAGAACTTCTCAACGTGATCCAGGACT...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTGCTTTGAACACTGGATaGCGATCTTCAGAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSQADLPGCGTGTPERQVALNTG*RSSEPS Trigger: TGAAGGCTCTGAAGATCGTCATCCAGTGTTCAAAGC...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGTGTCTCTGTGCCAGGTaGCATAGGTTGACAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERCLCAR*HRLTES Trigger: ACTCTCTGTCAACCTATGGCACCTGGCACAGAGACA...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCCATGAAGTGGAAACTTCAGGGTTCTTTGGAAAGTCGGTTGTGTCAGATGAGAGCCTTCACCTTCTaGTCCGAGGCCCAGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RPMKWKLQGSLESRLCQMRAFTF*SEAQAS Trigger: GGATGCCTGGGCCTCGGACCAGAAGGTGAAGGCTCT...CATCTGACACAACCGACTTTCCAAAGAACCCTGAAGTTTCCACTTCATGGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
||
| 3UTR CAA 72 bp | GAGCAACCCTGCTTCCACCTCCCAAGTAGCTGCAACTaGAAGTATGTGCCACCAGGGCAGTATAGCCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EQPCFHLPSSCN*KYVPPGQYSLK Trigger: TTTCAGGCTATACTGCCCTGGTGGCACATACTTCAAGTTGCAGCTACTTGGGAGGTGGAAGCAGGGTTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR TCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGCATAAAATCTTGGAATaGGTTCCCGGATGGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKHKILE*VPGWKR Trigger: TCGCTTCCATCCGGGAACTCATTCCAAGATTTTATG...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTCATAAAATCTTGGAATaGGTTCCCGGATGGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GSQADLPGCGTGTPERQVHKILE*VPGWKR Trigger: TCGCTTCCATCCGGGAACTCATTCCAAGATTTTATG...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTGGACAGTGTCCCCATaGATCTGTTTAAATGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKWTVSP*ICLNVS Trigger: GCTGACATTTAAACAGATTCATGGGGACACTGTCCA...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTGCTTCATTGAGAATCTaGAGTCGATCGTTCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSQADLPGCGTGTPERQVASLRI*SRSFSG Trigger: TCCTGAGAACGATCGACTTCAGATTCTCAATGAAGC...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGGACTTTCTGAATGATTaGCTGGAGCTGGGGGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERDFLND*LELGVR Trigger: TCTTACCCCCAGCTCCAGTCAATCATTCAGAAAGTC...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | ACTCACTCTGTAGACCAACCTGACCTTGAACTCAGAAATCCACCTGCCTCTGCCCCAGGTGCCATAGGTTaGCAGAGAGTTGGTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: THSVDQPDLELRNPPASAPGAIG*QRVGSA Trigger: AGCTGAACCAACTCTCTGTCAACCTATGGCACCTGG...GGCAGAGGCAGGTGGATTTCTGAGTTCAAGGTCAGGTTGGTCTACAGAGTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR TCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCACTTTCTTTGTCTTTaGCTCCGTGACAGTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERHFLCL*LRDSDG Trigger: CCCATCACTGTCACGGAGTCAAAGACAAAGAAAGTG...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | GGAAACTTCAGGGTTCTTTGGAAAGTCGGTTGTGTCAGATGGTGTTTTGCTGCGTTCTGGAGCTGTCTGTaGCTGTTCCTGTGGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GNFRVLWKVGCVRWCFAAFWSCL*LFLWLP Trigger: CGGCAGCCACAGGAACAGTCACAGACAGCTCCAGAA...CGCAGCAAAACACCATCTGACACAACCGACTTTCCAAAGAACCCTGAAGTTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
||
| CDS-3UTR TCA 90 bp | ATCTGCCTGTCACACATTCCTGCCTTGCCACAGGCCCATGAAGTGGAAACTTCACCTTCAGAGACTGGTTaGGCTCCTCTATGCGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ICLSHIPALPQAHEVETSPSETG*APLCGS Trigger: TGAACCGCATAGAGGAGCTCAACCAGTCTCTGAAGG...TGAAGTTTCCACTTCATGGGCCTGTGGCAAGGCAGGAATGTGTGACAGGCAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
||
| CDS-3UTR TCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGGCTTTGAACACTGGATaGCGATCTTCAGAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERALNTG*RSSEPS Trigger: TGAAGGCTCTGAAGATCGTCATCCAGTGTTCAAAGC...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGAGAACTGAGAAATCGTaGAAGTGGGCGATGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKRTEKS*KWAMTF Trigger: GAAAGTCATCGCCCACTTCCACGATTTCTCAGTTCT...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTCGCACACTCTCTTTCTaGAACATGTCCAGAAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSQADLPGCGTGTPERQVRTLSF*NMSRNG Trigger: ACCATTTCTGGACATGTTCCAGAAAGAGAGTGTGCG...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGGCTGTCTTTCTGGAGTaGTTTCCCTTCATGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKAVFLE*FPFMTF Trigger: GAAAGTCATGAAGGGAAACCACTCCAGAAAGACAGC...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCGGGAGAGGCACTGGTTaGCCAAGGCAACCTGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIGRGTG*PRQPDR Trigger: CCGGTCAGGTTGCCTTGGCCAACCAGTGCCTCTCCC...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | AGGCGTGCACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACATCAGAGCCTCGTCTTTaGCCAGGGTTTTCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RRAPPPPGCNSALKLVKTSEPRL*PGFSGA Trigger: AGCACCTGAAAACCCTGGCCAAAGACGAGGCTCTGA...TGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTGCACGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTCTGCCGGGTCCGAGGTaGCTGCAAACATGGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICLPGPR*LQTWRA Trigger: CGCTCTCCATGTTTGCAGCCACCTCGGACCCGGCAG...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCCTGCCGGGTCCGAGGTaGCTGCAAACATGGAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPILPGPR*LQTWRA Trigger: CGCTCTCCATGTTTGCAGCCACCTCGGACCCGGCAG...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGAGCAGCTTTGAACACTaGATGACGATCTTCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERSSFEH*MTIFRA Trigger: GGCTCTGAAGATCGTCATCCAGTGTTCAAAGCTGCT...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | CCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACACAAGCTGTGCAACGAACTCAGCCCTaGAAGCTGACATCACGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: PPPPGCNSALKLVKTQAVQRTQP*KLTSRS Trigger: ACTCCGTGATGTCAGCTTTCAGGGCTGAGTTCGTTG...CACAGCTTGTGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR TCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGACTCGACGTAAAAGCTaGGCTGCTGTTCAAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERTRRKS*AAVQNH Trigger: GTGATTTTGAACAGCAGCTCAGCTTTTACGTCGAGT...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGAGTGGTTTCCCTTCATaGCTTTCCTTGTTTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKSGFPS*LSLFPL Trigger: CAATGGAAACAAGGAAAGTCATGAAGGGAAACCACT...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | GACTCAGCAGTGCTTCTGGCTAGCGACAGAACTGCAGCCCAAGGCAATCAAGGGAGTCGTGCATTGTCTTaGAAATGTGCAAAAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: DSAVLLASDRTAAQGNQGSRALS*KCAKGH Trigger: ATGCCCTTTTGCACATTTGCAAGACAATGCACGACT...CCCTTGATTGCCTTGGGCTGCAGTTCTGTCGCTAGCCAGAAGCACTGCTGAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR GCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTTCCTTGTTTCCATTaGCAACCGGTTCACACTATG | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKFPCFH*QPVHTM Trigger: CATAGTGTGAACCGGTTGGCAATGGAAACAAGGAAA...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | CCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACACAAGCTGTGAAGAAAGCATCAGCTTaGGAGAGGCACTGGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PPPPGCNSALKLVKTQAVKKASA*ERHWLA Trigger: GGCCAACCAGTGCCTCTCCCAAGCTGATGCTTTCTT...CACAGCTTGTGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTAGAGCCTTCACCTTCTaGTCCGAGGCCCAGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICRAFTF*SEAQAS Trigger: GGATGCCTGGGCCTCGGACCAGAAGGTGAAGGCTCT...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCAGAGCCTTCACCTTCTaGTCCGAGGCCCAGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIRAFTF*SEAQAS Trigger: GGATGCCTGGGCCTCGGACCAGAAGGTGAAGGCTCT...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGCCACAGGCCCATGAAGTGGAAACTTCAGGGTTCTTTGGAAAGTCGGTTGCACTTTCTTTGTCTTTaGCTCCGTGACAGTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: PCHRPMKWKLQGSLESRLHFLCL*LRDSDG Trigger: CCCATCACTGTCACGGAGTCAAAGACAAAGAAAGTG...CAACCGACTTTCCAAAGAACCCTGAAGTTTCCACTTCATGGGCCTGTGGCAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
||
| CDS-3UTR GCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGACACTTCAGGATGGATaGTTCCACATAAAATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKTLQDG*FHIKSW Trigger: CCAAGATTTTATGTGGAAGCATCCATCCTGAAGTGT...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | GAAATACCCTTCAGAAAAGAAAGCCCTGAACCTTGGCTGCTCTCCATCAGTGCCTCAGGCATGTCTCCTTaGCTGTGTCGTTCACGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EIPFRKESPEPWLLSISASGMSP*LCRSRS Trigger: AGAACGTGAACGACACAGCCAAGGAGACATGCCTGA...GGCACTGATGGAGAGCAGCCAAGGTTCAGGGCTTTCTTTTCTGAAGGGTATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGAGACTGGGGCTCATATATCCCAGACCAGCTTCAAACATGTAACTGGGGTACACGGACACGAGTaGGTCTCCGATCCCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VFETGAHISQTSFKHVTGVHGHE*VSDPSD Trigger: ATCAGAGGGATCGGAGACCCACTCGTGTCCGTGTAC...CCCAGTTACATGTTTGAAGCTGGTCTGGGATATATGAGCCCCAGTCTCAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGAGGTTGACAGAGAGTTaGTTCAGCTTGTTGTTACGA | + |
|
Preference number: 4 (lower is better) Translates to: VNGSQADLPGCGTGTPERRLTES*FSLLLR Trigger: TCGTAACAACAAGCTGAACCAACTCTCTGTCAACCT...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTAGGTGGCTGCAAACATaGAGAGCGGGTCGGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICRWLQT*RAGRCH Trigger: ATGGCACCGACCCGCTCTCCATGTTTGCAGCCACCT...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | GAAATACCCTTCAGAAAAGAAAGCCCTGAACCTTGGCTGCTCTCCATCAGTGCCTTCAGCAGCTCCTTCTaGGATCCCTCCTCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EIPFRKESPEPWLLSISAFSSSF*DPSSKS Trigger: TGACTTTGAGGAGGGATCCCAGAAGGAGCTGCTGAA...GGCACTGATGGAGAGCAGCCAAGGTTCAGGGCTTTCTTTTCTGAAGGGTATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | TGCGGTAAACACGTGAAGGAGAGGTTTCCTGAAGTGGACACAGGTGAAAGGCTATTCAGCAGCTCCTTCTaGGATCCCTCCTCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CGKHVKERFPEVDTGERLFSSSF*DPSSKS Trigger: TGACTTTGAGGAGGGATCCCAGAAGGAGCTGCTGAA...TAGCCTTTCACCTGTGTCCACTTCAGGAAACCTCTCCTTCACGTGTTTACCGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCCATGAAGTGGAAACTTCAGGGTTCTTTGGAAAGTCGGTTGTGTCAGATGGCATCCTTCAGAGACTaGTTGAGCTCCTCTATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RPMKWKLQGSLESRLCQMASFRD*LSSSMR Trigger: CCGCATAGAGGAGCTCAACCAGTCTCTGAAGGATGC...CATCTGACACAACCGACTTTCCAAAGAACCCTGAAGTTTCCACTTCATGGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
||
| 3UTR CAA 72 bp | TGCCACAGGCCCATGAAGTGGAAACTTCAGGGTTCTTaGGAAAGTCGGTTGTGTCAGATGGTGTTTTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: CHRPMKWKLQGS*ESRLCQMVFCC Trigger: GCAGCAAAACACCATCTGACACAACCGACTTTCCAAAGAACCCTGAAGTTTCCACTTCATGGGCCTGTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
||
| CDS-3UTR TCA 90 bp | GAAATACCCTTCAGAAAAGAAAGCCCTGAACCTTGGCTGCTCTCCATCAGTGCCAGTCCTGGATCACGTTaGGAAGTTCTCGAACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EIPFRKESPEPWLLSISASPGSR*EVLEPE Trigger: TTCTGGTTCGAGAACTTCTCAACGTGATCCAGGACT...GGCACTGATGGAGAGCAGCCAAGGTTCAGGGCTTTCTTTTCTGAAGGGTATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTGGGCTAGGATGCTATTaGAGAAGGAGAGGCCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICGLGCY*RRRGPA Trigger: TGCTGGGCCTCTCCTTCTTCAATAGCATCCTAGCCC...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTCCTCAGGGCCAGCTCTaGCAGATGATTCATGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICPQGQL*QMIHVR Trigger: CCTGACATGAATCATCTGTCAGAGCTGGCCCTGAGG...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTACCTCTGCCTTTTTCTaGTCCCATAAACAGATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GSQADLPGCGTGTPERQVTSAFF*SHKQIN Trigger: ATTAATCTGTTTATGGGATCAGAAAAAGGCAGAGGT...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | ATTCCTGCCTTGCCACAGGCCCATGAAGTGGAAACTTCAGGGTTCTTTGGAAAGGCTTTGAACACTGGATaGCGATCTTCAGAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: IPALPQAHEVETSGFFGKALNTG*RSSEPS Trigger: TGAAGGCTCTGAAGATCGTCATCCAGTGTTCAAAGC...CTTTCCAAAGAACCCTGAAGTTTCCACTTCATGGGCCTGTGGCAAGGCAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
||
| CDS-3UTR GCA 90 bp | AGATTGGCCCCAAATGTATATACAACAGTAACCCTGCTCTTTGTTGTTGTTGTTAGGCTCTCCTTGAGGTaGGGGGCCACTTCGATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLAPNVYTTVTLLFVVVVRLSLR*GATSIP Trigger: GGGGATCGAAGTGGCCCCGCACCTCAAGGAGAGCCT...AACAACAACAACAAAGAGCAGGGTTACTGTTGTATATACATTTGGGGCCAATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR GCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATATGGAGAGCGGGTCGGTaGCATCGAGGACGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICIWRAGR*HRGRCS Trigger: TGAGCAGCGTCCTCGATGGCACCGACCCGCTCTCCA...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTGTTACACTTCAGGATaGATGCTTCCACATAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: MAAKQIFQDVALGLPKGKCYTSG*MLPHKI Trigger: GATTTTATGTGGAAGCATCCATCCTGAAGTGTAACA...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTTGTTACACTTCAGGATaGATGCTTCCACATAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: GSQADLPGCGTGTPERQVCYTSG*MLPHKI Trigger: GATTTTATGTGGAAGCATCCATCCTGAAGTGTAACA...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCGTACACGGACACGAGTaGGTCTCCGATCCCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIVHGHE*VSDPSD Trigger: ATCAGAGGGATCGGAGACCCACTCGTGTCCGTGTAC...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATACCCTGGGCCACCAGCTaGTTCTGGACAGTGTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICIPWATS*FWTVSP Trigger: TGGGGACACTGTCCAGAACCAGCTGGTGGCCCAGGG...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATAAGCAGCTCCACACCCTaGGCCACCAGCTGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICISSSTP*ATSWFW Trigger: CCAGAACCAGCTGGTGGCCCAGGGTGTGGAGCTGCT...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGAGACTGGGGCTCATATATCCCAGACCAGCTTCAAACATGTAACTGGGGAAAAAGGAGATGCTTaGGGAAGCCGGACTCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VFETGAHISQTSFKHVTGEKGDA*GSRTRH Trigger: GTGACGAGTCCGGCTTCCCCAAGCATCTCCTTTTTC...CCCAGTTACATGTTTGAAGCTGGTCTGGGATATATGAGCCCCAGTCTCAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATAGGGAGAGGCACTGGTTaGCCAAGGCAACCTGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICIGRGTG*PRQPDR Trigger: CCGGTCAGGTTGCCTTGGCCAACCAGTGCCTCTCCC...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | ATTCCTGCCTTGCCACAGGCCCATGAAGTGGAAACTTCAGGGTTCTTTGGAAAGAGCAGCTTTGAACACTaGATGACGATCTTCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IPALPQAHEVETSGFFGKSSFEH*MTIFRA Trigger: GGCTCTGAAGATCGTCATCCAGTGTTCAAAGCTGCT...CTTTCCAAAGAACCCTGAAGTTTCCACTTCATGGGCCTGTGGCAAGGCAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
||
| CDS-3UTR TCA 90 bp | CCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACACAAGCTGTGCATAAAATCTTGGAATaGGTTCCCGGATGGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PPPPGCNSALKLVKTQAVHKILE*VPGWKR Trigger: TCGCTTCCATCCGGGAACTCATTCCAAGATTTTATG...CACAGCTTGTGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR TCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCCTCAGCCCTGAAAGCTaGCATCACGGAGTTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPILSPES*HHGVQQ Trigger: CTGTTGAACTCCGTGATGTCAGCTTTCAGGGCTGAG...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCCAACGAACTCAGCCCTaGAAGCTGACATCACGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIQRTQP*KLTSRS Trigger: ACTCCGTGATGTCAGCTTTCAGGGCTGAGTTCGTTG...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCCCAGGTGCCATAGGTTaGCAGAGAGTTGGTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIPGAIG*QRVGSA Trigger: AGCTGAACCAACTCTCTGTCAACCTATGGCACCTGG...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTCCAGGTGCCATAGGTTaGCAGAGAGTTGGTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICPGAIG*QRVGSA Trigger: AGCTGAACCAACTCTCTGTCAACCTATGGCACCTGG...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCGAACGAAAAAGGAGATaGTTGGGGAAGCCGGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIERKRR*LGKPDS Trigger: CGAGTCCGGCTTCCCCAAGCATCTCCTTTTTCGTTC...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCGAAAAAGGAGATGCTTaGGGAAGCCGGACTCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIEKGDA*GSRTRH Trigger: GTGACGAGTCCGGCTTCCCCAAGCATCTCCTTTTTC...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTGAAAAAGGAGATGCTTaGGGAAGCCGGACTCGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICEKGDA*GSRTRH Trigger: GTGACGAGTCCGGCTTCCCCAAGCATCTCCTTTTTC...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | GAAATAAAGGCCATTTGGGAGTATTTGAACAGCACCATAGTGCATTCTGGGTTCGACAGGGTCCTTGGTTaGCTCCTGCTGGTGCTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EIKAIWEYLNSTIVHSGFDRVLG*LLLVLD Trigger: ATCAAGCACCAGCAGGAGCCAACCAAGGACCCTGTC...GAACCCAGAATGCACTATGGTGCTGTTCAAATACTCCCAAATGGCCTTTATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTAAGAAAGCATCAGCTTaGGAGAGGCACTGGTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICKKASA*ERHWLA Trigger: GGCCAACCAGTGCCTCTCCCAAGCTGATGCTTTCTT...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTCAGAGCCTCGTCTTTaGCCAGGGTTTTCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPISEPRL*PGFSGA Trigger: AGCACCTGAAAACCCTGGCCAAAGACGAGGCTCTGA...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCGCATCCTTCAGAGACTaGTTGAGCTCCTCTATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIASFRD*LSSSMR Trigger: CCGCATAGAGGAGCTCAACCAGTCTCTGAAGGATGC...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTGCATCCTTCAGAGACTaGTTGAGCTCCTCTATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICASFRD*LSSSMR Trigger: CCGCATAGAGGAGCTCAACCAGTCTCTGAAGGATGC...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | AGATTGGCCCCAAATGTATATACAACAGTAACCCTGCTCTTTGTTGTTGTTGTTAGAGCCTTCACCTTCTaGTCCGAGGCCCAGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: RLAPNVYTTVTLLFVVVVRAFTF*SEAQAS Trigger: GGATGCCTGGGCCTCGGACCAGAAGGTGAAGGCTCT...AACAACAACAACAAAGAGCAGGGTTACTGTTGTATATACATTTGGGGCCAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR TCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGGGCGATGACTTTCTaGATGATTGACTGGAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIWAMTF*MIDWSW Trigger: CCAGCTCCAGTCAATCATTCAGAAAGTCATCGCCCA...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | AGATTGGCCCCAAATGTATATACAACAGTAACCCTGCTCTTTGTTGTTGTTGTTTTCTGGAGCTGTCTGTaGCTGTTCCTGTGGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RLAPNVYTTVTLLFVVVVFWSCL*LFLWLP Trigger: CGGCAGCCACAGGAACAGTCACAGACAGCTCCAGAA...AACAACAACAACAAAGAGCAGGGTTACTGTTGTATATACATTTGGGGCCAATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR GCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCCACACATCGAGGAGATaGGCTCATAGACCAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIHTSRR*AHRPAF Trigger: GAAAGCTGGTCTATGAGCGCATCTCCTCGATGTGTG...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTCACACATCGAGGAGATaGGCTCATAGACCAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICHTSRR*AHRPAF Trigger: GAAAGCTGGTCTATGAGCGCATCTCCTCGATGTGTG...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATAGATCTGGCAAGGCACTaGGGCTGTCCACACACATCG | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICIDLARH*GCPHTS Trigger: CGATGTGTGTGGACAGCCGCAGTGCCTTGCCAGATC...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | GAAATAAAGGCCATTTGGGAGTATTTGAACAGCACCATAGTGCATTCTGGGTTCTTCCTGTTCCGGGAATaGCAGGGAAAGACAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: EIKAIWEYLNSTIVHSGFFLFRE*QGKTAI Trigger: GATGGCTGTCTTTCCCTGGCATTCCCGGAACAGGAA...GAACCCAGAATGCACTATGGTGCTGTTCAAATACTCCCAAATGGCCTTTATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR GCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCTGGAGAGCGGGTCGGTaGCATCGAGGACGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQIWRAGR*HRGRCS Trigger: TGAGCAGCGTCCTCGATGGCACCGACCCGCTCTCCA...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCCAGGCATGGATCAACTaGACAAGAACAGGTTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIQAWIN*TRTGSR Trigger: CCTGGAACCTGTTCTTGTGCAGTTGATCCATGCCTG...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106552.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTCAGGCATGTCTCCTTaGCTGTGTCGTTCACGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPISGMSP*LCRSRS Trigger: AGAACGTGAACGACACAGCCAAGGAGACATGCCTGA...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCAGCAGCTCCACACCCTaGGCCACCAGCTGGTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQISSSTP*ATSWFW Trigger: CCAGAACCAGCTGGTGGCCCAGGGTGTGGAGCTGCT...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCGGGAGAGGCACTGGTTaGCCAAGGCAACCTGACCGG | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQIGRGTG*PRQPDR Trigger: CCGGTCAGGTTGCCTTGGCCAACCAGTGCCTCTCCC...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTGAAATAAAGGCCATTTGGGAGTATTTGAACAGCACCATAGTGCATTCTAGGTGGCTGCAAACATaGAGAGCGGGTCGGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FGEIKAIWEYLNSTIVHSRWLQT*RAGRCH Trigger: ATGGCACCGACCCGCTCTCCATGTTTGCAGCCACCT...AGAATGCACTATGGTGCTGTTCAAATACTCCCAAATGGCCTTTATTTCACCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTTTCAGCAGCTCCTTCTaGGATCCCTCCTCAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICFSSSF*DPSSKS Trigger: TGACTTTGAGGAGGGATCCCAGAAGGAGCTGCTGAA...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCCAACAGCTGGAAACAGCTGATTTTCATAGCCCAGGTTGACCTTAAACTCAGCAGCTTTGAACACTaGATGACGATCTTCAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SANSWKQLIFIAQVDLKLSSFEH*MTIFRA Trigger: GGCTCTGAAGATCGTCATCCAGTGTTCAAAGCTGCT...GAGTTTAAGGTCAACCTGGGCTATGAAAATCAGCTGTTTCCAGCTGTTGGCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | CCTTGCCACAGGCCCATGAAGTGGAAACTTCAGGGTTCTTTGGAAAGTCGGTTGGAGGACAAACTTGCTTaGGTAGAACTGAATAACACT | + |
|
Preference number: 4 (lower is better) Translates to: PCHRPMKWKLQGSLESRLEDKLA*VELNNT Trigger: AGTGTTATTCAGTTCTACCCAAGCAAGTTTGTCCTC...CAACCGACTTTCCAAAGAACCCTGAAGTTTCCACTTCATGGGCCTGTGGCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
||
| 3UTR CAA 72 bp | AGCTTCAAACATGTAACTGGGGACCTTGATCAGATCTaGATCCTCCTGTCTCTACCTCCTAACTACTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SFKHVTGDLDQI*ILLSLPPNYCR Trigger: ACGGCAGTAGTTAGGAGGTAGAGACAGGAGGATCAAGATCTGATCAAGGTCCCCAGTTACATGTTTGAAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR TCA 90 bp | GTTTTTGAGACTGGGGCTCATATATCCCAGACCAGCTTCAAACATGTAACTGGGGCTTCATTGAGAATCTaGAGTCGATCGTTCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VFETGAHISQTSFKHVTGASLRI*SRSFSG Trigger: TCCTGAGAACGATCGACTTCAGATTCTCAATGAAGC...CCCAGTTACATGTTTGAAGCTGGTCTGGGATATATGAGCCCCAGTCTCAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR TCA 90 bp | GCCAACAGCTGGAAACAGCTGATTTTCATAGCCCAGGTTGACCTTAAACTCATGACTCGACGTAAAAGCTaGGCTGCTGTTCAAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: ANSWKQLIFIAQVDLKLMTRRKS*AAVQNH Trigger: GTGATTTTGAACAGCAGCTCAGCTTTTACGTCGAGT...CATGAGTTTAAGGTCAACCTGGGCTATGAAAATCAGCTGTTTCCAGCTGTTGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTAGTCCTGGATCACGTTaGGAAGTTCTCGAACCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICSPGSR*EVLEPE Trigger: TTCTGGTTCGAGAACTTCTCAACGTGATCCAGGACT...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTCACTTTCTTTGTCTTTaGCTCCGTGACAGTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICHFLCL*LRDSDG Trigger: CCCATCACTGTCACGGAGTCAAAGACAAAGAAAGTG...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | CCTTGCCACAGGCCCATGAAGTGGAAACTTCAGGGTTCTTTGGAAAGTCGGTTGACCTCTGCCTTTTTCTaGTCCCATAAACAGATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PCHRPMKWKLQGSLESRLTSAFF*SHKQIN Trigger: ATTAATCTGTTTATGGGATCAGAAAAAGGCAGAGGT...CAACCGACTTTCCAAAGAACCCTGAAGTTTCCACTTCATGGGCCTGTGGCAAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCGCTTTGAACACTGGATaGCGATCTTCAGAGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIALNTG*RSSEPS Trigger: TGAAGGCTCTGAAGATCGTCATCCAGTGTTCAAAGC...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | GAAATAAAGGCCATTTGGGAGTATTTGAACAGCACCATAGTGCATTCTGGGTTCCACACATCGAGGAGATaGGCTCATAGACCAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EIKAIWEYLNSTIVHSGFHTSRR*AHRPAF Trigger: GAAAGCTGGTCTATGAGCGCATCTCCTCGATGTGTG...GAACCCAGAATGCACTATGGTGCTGTTCAAATACTCCCAAATGGCCTTTATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | AGGCGTGCACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACATGTTACACTTCAGGATaGATGCTTCCACATAAAATC | + |
|
Preference number: 4 (lower is better) Translates to: RRAPPPPGCNSALKLVKTCYTSG*MLPHKI Trigger: GATTTTATGTGGAAGCATCCATCCTGAAGTGTAACA...TGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTGCACGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATAGTACACGGACACGAGTaGGTCTCCGATCCCTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICIVHGHE*VSDPSD Trigger: ATCAGAGGGATCGGAGACCCACTCGTGTCCGTGTAC...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGAGACTGGGGCTCATATATCCCAGACCAGCTTCAAACATGTAACTGGGAGAACTGAGAAATCGTaGAAGTGGGCGATGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VFETGAHISQTSFKHVTGRTEKS*KWAMTF Trigger: GAAAGTCATCGCCCACTTCCACGATTTCTCAGTTCT...CCCAGTTACATGTTTGAAGCTGGTCTGGGATATATGAGCCCCAGTCTCAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | GTTTTTGAGACTGGGGCTCATATATCCCAGACCAGCTTCAAACATGTAACTGGGCGCACACTCTCTTTCTaGAACATGTCCAGAAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: VFETGAHISQTSFKHVTGRTLSF*NMSRNG Trigger: ACCATTTCTGGACATGTTCCAGAAAGAGAGTGTGCG...CCCAGTTACATGTTTGAAGCTGGTCTGGGATATATGAGCCCCAGTCTCAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATATCTCAGCCAGGAACTTaGAGTCTCCCCCGTACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICISQPGT*SLPRTS Trigger: GCTTGTACGGGGGAGACTCCAAGTTCCTGGCTGAGA...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| 3UTR CAA 72 bp | ATGAAGTGGAAACTTCAGGGTTCTTTGGAAAGTCGGTaGTGTCAGATGGTGTTTTGCTGCGGTAAACACGTG | + |
|
Preference number: 4 (lower is better) Translates to: MKWKLQGSLESR*CQMVFCCGKHV Trigger: CACGTGTTTACCGCAGCAAAACACCATCTGACACAACCGACTTTCCAAAGAACCCTGAAGTTTCCACTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTCATAAAATCTTGGAATaGGTTCCCGGATGGAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICHKILE*VPGWKR Trigger: TCGCTTCCATCCGGGAACTCATTCCAAGATTTTATG...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGGACAGTGTCCCCATaGATCTGTTTAAATGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIWTVSP*ICLNVS Trigger: GCTGACATTTAAACAGATTCATGGGGACACTGTCCA...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCGCTTCATTGAGAATCTaGAGTCGATCGTTCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIASLRI*SRSFSG Trigger: TCCTGAGAACGATCGACTTCAGATTCTCAATGAAGC...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTACTCGACGTAAAAGCTaGGCTGCTGTTCAAAATCAC | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICTRRKS*AAVQNH Trigger: GTGATTTTGAACAGCAGCTCAGCTTTTACGTCGAGT...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCGGCCGATGGCGGCTTTaGAGAAAGCATCAGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQIGRWRL*RKHQLG Trigger: CCCAAGCTGATGCTTTCTTCAAAGCCGCCATCGGCC...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCTTCTGGAGCTGTCTGTaGCTGTTCCTGTGGCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQIFWSCL*LFLWLP Trigger: CGGCAGCCACAGGAACAGTCACAGACAGCTCCAGAA...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATACCTTCAGAGACTGGTTaGGCTCCTCTATGCGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICIPSETG*APLCGS Trigger: TGAACCGCATAGAGGAGCTCAACCAGTCTCTGAAGG...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATACAGCCTCACACAGCTTaGTGTTCTCAGCCAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICIQPHTA*CSQPGT Trigger: AGTTCCTGGCTGAGAACAGCAAGCTGTGTGAGGCTG...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATATTCCTGTTCCGGGAATaGCAGGGAAAGACAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICIFLFRE*QGKTAI Trigger: GATGGCTGTCTTTCCCTGGCATTCCCGGAACAGGAA...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTCGCACACTCTCTTTCTaGAACATGTCCAGAAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICRTLSF*NMSRNG Trigger: ACCATTTCTGGACATGTTCCAGAAAGAGAGTGTGCG...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCGCTGTCTTTCTGGAGTaGTTTCCCTTCATGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIAVFLE*FPFMTF Trigger: GAAAGTCATGAAGGGAAACCACTCCAGAAAGACAGC...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTGCTGTCTTTCTGGAGTaGTTTCCCTTCATGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICAVFLE*FPFMTF Trigger: GAAAGTCATGAAGGGAAACCACTCCAGAAAGACAGC...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TCAGCCAACAGCTGGAAACAGCTGATTTTCATAGCCCAGGTTGACCTTAAACTCAGGTTGACAGAGAGTTaGTTCAGCTTGTTGTTACGA | + |
|
Preference number: 4 (lower is better) Translates to: SANSWKQLIFIAQVDLKLRLTES*FSLLLR Trigger: TCGTAACAACAAGCTGAACCAACTCTCTGTCAACCT...GAGTTTAAGGTCAACCTGGGCTATGAAAATCAGCTGTTTCCAGCTGTTGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCAGGTGGCTGCAAACATaGAGAGCGGGTCGGTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQIRWLQT*RAGRCH Trigger: ATGGCACCGACCCGCTCTCCATGTTTGCAGCCACCT...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATAGCATCCTTCAGAGACTaGTTGAGCTCCTCTATGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICIASFRD*LSSSMR Trigger: CCGCATAGAGGAGCTCAACCAGTCTCTGAAGGATGC...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTAGTGGTTTCCCTTCATaGCTTTCCTTGTTTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICSGFPS*LSLFPL Trigger: CAATGGAAACAAGGAAAGTCATGAAGGGAAACCACT...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATACACACATCGAGGAGATaGGCTCATAGACCAGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICIHTSRR*AHRPAF Trigger: GAAAGCTGGTCTATGAGCGCATCTCCTCGATGTGTG...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCAGTCGTGCATTGTCTTaGAAATGTGCAAAAGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPISRALS*KCAKGH Trigger: ATGCCCTTTTGCACATTTGCAAGACAATGCACGACT...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTTTTCCTTGTTTCCATTaGCAACCGGTTCACACTATG | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICFPCFH*QPVHTM Trigger: CATAGTGTGAACCGGTTGGCAATGGAAACAAGGAAA...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATATGTCTCTGTGCCAGGTaGCATAGGTTGACAGAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICICLCAR*HRLTES Trigger: ACTCTCTGTCAACCTATGGCACCTGGCACAGAGACA...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | AGATTGGCCCCAAATGTATATACAACAGTAACCCTGCTCTTTGTTGTTGTTGTTTTGGTTGGCTCCTGCTaGTGCTTGATAAAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLAPNVYTTVTLLFVVVVLVGSC*CLIKAS Trigger: GGAAGCCTTTATCAAGCACCAGCAGGAGCCAACCAA...AACAACAACAACAAAGAGCAGGGTTACTGTTGTATATACATTTGGGGCCAATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATATTGGTTGGCTCCTGCTaGTGCTTGATAAAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICILVGSC*CLIKAS Trigger: GGAAGCCTTTATCAAGCACCAGCAGGAGCCAACCAA...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 |
||
| CDS-3UTR CCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCTCTCAGCCAGGAACTTaGAGTCTCCCCCGTACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQISQPGT*SLPRTS Trigger: GCTTGTACGGGGGAGACTCCAAGTTCCTGGCTGAGA...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCCTCAGCCCTGAAAGCTaGCATCACGGAGTTCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQILSPES*HHGVQQ Trigger: CTGTTGAACTCCGTGATGTCAGCTTTCAGGGCTGAG...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCCCAGGTGCCATAGGTTaGCAGAGAGTTGGTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQIPGAIG*QRVGSA Trigger: AGCTGAACCAACTCTCTGTCAACCTATGGCACCTGG...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCGTTTGCTTCGCTTCTTaGTGTAATCCAGAGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIVCFAS*CNPEFS Trigger: TGAAAACTCTGGATTACATCAAGAAGCGAAGCAAAC...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCCCTTCAGAGACTGGTTaGGCTCCTCTATGCGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQIPSETG*APLCGS Trigger: TGAACCGCATAGAGGAGCTCAACCAGTCTCTGAAGG...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTACACTTCAGGATGGATaGTTCCACATAAAATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICTLQDG*FHIKSW Trigger: CCAAGATTTTATGTGGAAGCATCCATCCTGAAGTGT...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCTTCCTGTTCCGGGAATaGCAGGGAAAGACAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQIFLFRE*QGKTAI Trigger: GATGGCTGTCTTTCCCTGGCATTCCCGGAACAGGAA...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCGAGGACAAACTTGCTTaGGTAGAACTGAATAACACT | + |
|
Preference number: 4 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIEDKLA*VELNNT Trigger: AGTGTTATTCAGTTCTACCCAAGCAAGTTTGTCCTC...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| 3UTR CAA 72 bp | AAACAGTTTGGTGAAATAAAGGCCATTTGGGAGTATTaGAACAGCACCATAGTGCATTCTGGGTTCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KQFGEIKAIWEY*NSTIVHSGFWH Trigger: ATGCCAGAACCCAGAATGCACTATGGTGCTGTTCAAATACTCCCAAATGGCCTTTATTTCACCAAACTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR TCA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTACCTCTGCCTTTTTCTaGTCCCATAAACAGATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: PFCCQNSQVEGKSLKPICTSAFF*SHKQIN Trigger: ATTAATCTGTTTATGGGATCAGAAAAAGGCAGAGGT...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATAAGAACTGAGAAATCGTaGAAGTGGGCGATGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICIRTEKS*KWAMTF Trigger: GAAAGTCATCGCCCACTTCCACGATTTCTCAGTTCT...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCTTGGTTGGCTCCTGCTaGTGCTTGATAAAGGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQILVGSC*CLIKAS Trigger: GGAAGCCTTTATCAAGCACCAGCAGGAGCCAACCAA...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 |
||
| CDS-3UTR TCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCGACTTTCTGAATGATTaGCTGGAGCTGGGGGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQIDFLND*LELGVR Trigger: TCTTACCCCCAGCTCCAGTCAATCATTCAGAAAGTC...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | AGATTGGCCCCAAATGTATATACAACAGTAACCCTGCTCTTTGTTGTTGTTGTTTTTCCTTGTTTCCATTaGCAACCGGTTCACACTATG | + |
|
Preference number: 4 (lower is better) Translates to: RLAPNVYTTVTLLFVVVVFPCFH*QPVHTM Trigger: CATAGTGTGAACCGGTTGGCAATGGAAACAAGGAAA...AACAACAACAACAAAGAGCAGGGTTACTGTTGTATATACATTTGGGGCCAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR TCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCTGGACAGTGTCCCCATaGATCTGTTTAAATGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQIWTVSP*ICLNVS Trigger: GCTGACATTTAAACAGATTCATGGGGACACTGTCCA...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCGCTTCATTGAGAATCTaGAGTCGATCGTTCTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQIASLRI*SRSFSG Trigger: TCCTGAGAACGATCGACTTCAGATTCTCAATGAAGC...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGTGAAATAAAGGCCATTTGGGAGTATTTGAACAGCACCATAGTGCATTCTGTTTGCTTCGCTTCTTaGTGTAATCCAGAGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FGEIKAIWEYLNSTIVHSVCFAS*CNPEFS Trigger: TGAAAACTCTGGATTACATCAAGAAGCGAAGCAAAC...AGAATGCACTATGGTGCTGTTCAAATACTCCCAAATGGCCTTTATTTCACCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR TCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATAGTTTGCTTCGCTTCTTaGTGTAATCCAGAGTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICIVCFAS*CNPEFS Trigger: TGAAAACTCTGGATTACATCAAGAAGCGAAGCAAAC...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATAACACTTCAGGATGGATaGTTCCACATAAAATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICITLQDG*FHIKSW Trigger: CCAAGATTTTATGTGGAAGCATCCATCCTGAAGTGT...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATATTCCACATAAAATCTTaGAATGAGTTCCCGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICIFHIKS*NEFPDG Trigger: TCCATCCGGGAACTCATTCCAAGATTTTATGTGGAA...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TTTGGTGAAATAAAGGCCATTTGGGAGTATTTGAACAGCACCATAGTGCATTCTTTCCACATAAAATCTTaGAATGAGTTCCCGGATGGA | + |
|
Preference number: 4 (lower is better) Translates to: FGEIKAIWEYLNSTIVHSFHIKS*NEFPDG Trigger: TCCATCCGGGAACTCATTCCAAGATTTTATGTGGAA...AGAATGCACTATGGTGCTGTTCAAATACTCCCAAATGGCCTTTATTTCACCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCCGCACACTCTCTTTCTaGAACATGTCCAGAAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQIRTLSF*NMSRNG Trigger: ACCATTTCTGGACATGTTCCAGAAAGAGAGTGTGCG...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATAGAGGACAAACTTGCTTaGGTAGAACTGAATAACACT | + |
|
Preference number: 4 (lower is better) Translates to: FCCQNSQVEGKSLKPICIEDKLA*VELNNT Trigger: AGTGTTATTCAGTTCTACCCAAGCAAGTTTGTCCTC...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCAGTGGTTTCCCTTCATaGCTTTCCTTGTTTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQISGFPS*LSLFPL Trigger: CAATGGAAACAAGGAAAGTCATGAAGGGAAACCACT...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS-3UTR TCA 90 bp | AGATTGGCCCCAAATGTATATACAACAGTAACCCTGCTCTTTGTTGTTGTTGTTACCTCTGCCTTTTTCTaGTCCCATAAACAGATTAAT | + |
|
Preference number: 4 (lower is better) Translates to: RLAPNVYTTVTLLFVVVVTSAFF*SHKQIN Trigger: ATTAATCTGTTTATGGGATCAGAAAAAGGCAGAGGT...AACAACAACAACAAAGAGCAGGGTTACTGTTGTATATACATTTGGGGCCAATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCAGGTTGACAGAGAGTTaGTTCAGCTTGTTGTTACGA | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQIRLTES*FSLLLR Trigger: TCGTAACAACAAGCTGAACCAACTCTCTGTCAACCT...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR GCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCACACTTCAGGATGGATaGTTCCACATAAAATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQITLQDG*FHIKSW Trigger: CCAAGATTTTATGTGGAAGCATCCATCCTGAAGTGT...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CCA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCGAGGACAAACTTGCTTaGGTAGAACTGAATAACACT | + |
|
Preference number: 4 (lower is better) Translates to: KITKTSKFQEELMAAKQIEDKLA*VELNNT Trigger: AGTGTTATTCAGTTCTACCCAAGCAAGTTTGTCCTC...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS GCA 90 bp | TGGCTGCCGGGTCCGAGGTGGCTGCAAACATGGAGAGCGGGTCGGTaGCATCGAGGACGCTGCTCAGAGGATCGATCACGGAGCTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WLPGPRWLQTWRAGR*HRGRCSEDRSRSWK Trigger: CTTCCAGCTCCGTGATCGATCCTCTGAGCAGCGTCCTCGATGGCACCGACCCGCTCTCCATGTTTGCAGCCACCTCGGACCCGGCAGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 ENSMUST00000175922.8 |
||
| CDS GCA 90 bp | GGAGCTGTCTGTGACTGTTCCTGTGGCTGCCGGGTCCGAGGTGGCTaGAAACATGGAGAGCGGGTCGGTGCCATCGAGGACGCTGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: GAVCDCSCGCRVRGG*KHGERVGAIEDAAQ Trigger: CTGAGCAGCGTCCTCGATGGCACCGACCCGCTCTCCATGTTTGCAGCCACCTCGGACCCGGCAGCCACAGGAACAGTCACAGACAGCTCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 ENSMUST00000175922.8 |
||
| CDS GCA 90 bp | TCAGCGGGTGGTAGTCGCCGCACTCCAGAGGCACTGTCTCCAACCTaGAAGACGCCAGCTCCGCCTTGTAGTTCCTGTTCCGGGAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: SAGGSRRTPEALSPT*KTPAPPCSSCSGNA Trigger: GGCATTCCCGGAACAGGAACTACAAGGCGGAGCTGGCGTCTTGCAGGTTGGAGACAGTGCCTCTGGAGTGCGGCGACTACCACCCGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS TCA 90 bp | GGTAGGCCCGGGCGTACACGGACACGAGTGGGTCTCCGATCCCTCTaGTCATGCAGGTTAGTCGGGGCAGGCACTCTGAAATCCCCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: GRPGRTRTRVGLRSL*SCRLVGAGTLKSPF Trigger: AAACGGGGATTTCAGAGTGCCTGCCCCGACTAACCTGCATGATCAGAGGGATCGGAGACCCACTCGTGTCCGTGTACGCCCGGGCCTACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS CCA 90 bp | AAGCCTCTGGAGCGTGGTAGGAGACACACTGGAAGATCCAGCCCATaGCAGGCGAGTACAGAGGGAGATAGGACAGCAGCTCCACACCCT | + |
|
Preference number: 5 (lower is better) Translates to: KPLERGRRHTGRSSP*QASTEGDRTAAPHP Trigger: AGGGTGTGGAGCTGCTGTCCTATCTCCCTCTGTACTCGCCTGCCATGGGCTGGATCTTCCAGTGTGTCTCCTACCACGCTCCAGAGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS CCA 90 bp | GAAGGGCTCCGACGGCCGCAGCTTCCCATCGATGCTTATCGTCTTTaGGACTTCGGGAACGAGGCCGATGGCGGCTTTGAAGAAAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: EGLRRPQLPIDAYRL*DFGNEADGGFEESI Trigger: GATGCTTTCTTCAAAGCCGCCATCGGCCTCGTTCCCGAAGTCCCAAAGACGATAAGCATCGATGGGAAGCTGCGGCCGTCGGAGCCCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS CCA 90 bp | AGAAGGAGAGGCCCAGCAGGCTCTGTCGCTTCAGAGCCTCGTCTTTaGCCAGGGTTTTCAGGTGCTCCAGGATCTGAGCCATCACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RRRGPAGSVASEPRL*PGFSGAPGSEPSQP Trigger: AGGCTGTGATGGCTCAGATCCTGGAGCACCTGAAAACCCTGGCCAAAGACGAGGCTCTGAAGCGACAGAGCCTGCTGGGCCTCTCCTTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTAGGATGACAGGGTCCTaGGTTGGCTCCTGCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSQADLPGCGTGTPERQVRMTGS*VGSCWC Trigger: GCACCAGCAGGAGCCAACCAAGGACCCTGTCATCCT...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGAGGATGACAGGGTCCTaGGTTGGCTCCTGCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: MAAKQIFQDVALGLPKGKRMTGS*VGSCWC Trigger: GCACCAGCAGGAGCCAACCAAGGACCCTGTCATCCT...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 |
||
| CDS TCA 90 bp | GGTTCAGCTTGTTGTTACGAAGGTCCCCGTGGGCTAGGATGCTATTaGAGAAGGAGAGGCCCAGCAGGCTCTGTCGCTTCAGAGCCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: GSACCYEGPRGLGCY*RRRGPAGSVASEPR Trigger: ACGAGGCTCTGAAGCGACAGAGCCTGCTGGGCCTCTCCTTCTTCAATAGCATCCTAGCCCACGGGGACCTTCGTAACAACAAGCTGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS CCA 90 bp | TGTCTCCTTGGCTGTGTCGTTCACGTTCTCTGGGGAGAAATGATCTaGCAAGGCACTGCGGCTGTCCACACACATCGAGGAGATGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: CLLGCVVHVLWGEMI*QGTAAVHTHRGDAL Trigger: GAGCGCATCTCCTCGATGTGTGTGGACAGCCGCAGTGCCTTGCCAGATCATTTCTCCCCAGAGAACGTGAACGACACAGCCAAGGAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGGCTTCCATGATGCACTaGCAAACCTCCACCCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: MAAKQIFQDVALGLPKGKASMMH*QTSTRT Trigger: TGTGCGGGTGGAGGTTTGCAAGTGCATCATGGAAGC...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTCATCTGAGGATGACAGGGTCCTaGGTTGGCTCCTGCTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CVCQASIPLTEPYPSPHLRMTGS*VGSCWC Trigger: GCACCAGCAGGAGCCAACCAAGGACCCTGTCATCCT...CAGATGAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CAA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTAGGCCGATGGCGGCTTaGAAGAAAGCATCAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSQADLPGCGTGTPERQVRPMAA*KKASAW Trigger: CCAAGCTGATGCTTTCTTCAAAGCCGCCATCGGCCT...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGAGGCCGATGGCGGCTTaGAAGAAAGCATCAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: MAAKQIFQDVALGLPKGKRPMAA*KKASAW Trigger: CCAAGCTGATGCTTTCTTCAAAGCCGCCATCGGCCT...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTTTCTCAGCCAGGAACTaGGAGTCTCCCCCGTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: GSQADLPGCGTGTPERQVFSARN*ESPPYK Trigger: CTTGTACGGGGGAGACTCCAAGTTCCTGGCTGAGAA...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTTTCAGAGCCTCGTCTTaGGCCAGGGTTTTCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSQADLPGCGTGTPERQVFRASS*ARVFRC Trigger: GCACCTGAAAACCCTGGCCAAAGACGAGGCTCTGAA...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTTGGGCTAGGATGCTATaGAAGAAGGAGAGGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSQADLPGCGTGTPERQVWARML*KKERPS Trigger: GCTGGGCCTCTCCTTCTTCAATAGCATCCTAGCCCA...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGGCCAGGTGCCATAGGTaGACAGAGAGTTGGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: MAAKQIFQDVALGLPKGKARCHR*TESWFS Trigger: GCTGAACCAACTCTCTGTCAACCTATGGCACCTGGC...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS TCA 90 bp | AGGCATGTCTCCTTGGCTGTGTCGTTCACGTTCTCTGGGGAGAAATaGTCTGGCAAGGCACTGCGGCTGTCCACACACATCGAGGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: RHVSLAVSFTFSGEK*SGKALRLSTHIEEM Trigger: CATCTCCTCGATGTGTGTGGACAGCCGCAGTGCCTTGCCAGATCATTTCTCCCCAGAGAACGTGAACGACACAGCCAAGGAGACATGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS TCA 90 bp | TTCAGAGCCTCGTCTTTGGCCAGGGTTTTCAGGTGCTCCAGGATCTaGGCCATCACAGCCTCACACAGCTTGCTGTTCTCAGCCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FRASSLARVFRCSRI*AITASHSLLFSARN Trigger: GTTCCTGGCTGAGAACAGCAAGCTGTGTGAGGCTGTGATGGCTCAGATCCTGGAGCACCTGAAAACCCTGGCCAAAGACGAGGCTCTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS TCA 90 bp | GGAGGTAGAAGACGTGCTTCCTTTCCGGCTCACTTTCTTTGTCTTTaGCTCCGTGACAGTGATGGGCTTCAGCGGGTGGTAGTCGCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: GGRRRASFPAHFLCL*LRDSDGLQRVVVAA Trigger: TGCGGCGACTACCACCCGCTGAAGCCCATCACTGTCACGGAGTCAAAGACAAAGAAAGTGAGCCGGAAAGGAAGCACGTCTTCTACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 ENSMUST00000175922.8 |
||
| CDS TCA 90 bp | CCTTCACCTTCTGGTCCGAGGCCCAGGCATCCTTCAGAGACTGGTTaGGCTCCTCTATGCGGTTCACATAATCCTGCTGGGTCAGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PSPSGPRPRHPSETG*APLCGSHNPAGSGS Trigger: TGAACCTGACCCAGCAGGATTATGTGAACCGCATAGAGGAGCTCAACCAGTCTCTGAAGGATGCCTGGGCCTCGGACCAGAAGGTGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 ENSMUST00000175922.8 |
||
| CDS GCA 90 bp | CTGTGTCGTTCACGTTCTCTGGGGAGAAATGATCTGGCAAGGCACTaGGGCTGTCCACACACATCGAGGAGATGCGCTCATAGACCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LCRSRSLGRNDLARH*GCPHTSRRCAHRPA Trigger: AGCTGGTCTATGAGCGCATCTCCTCGATGTGTGTGGACAGCCGCAGTGCCTTGCCAGATCATTTCTCCCCAGAGAACGTGAACGACACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS CCA 90 bp | GCACAGCCGTGTCTCTGTGCCAGGTGCCATAGGTTGACAGAGAGTTaGTTCAGCTTGTTGTTACGAAGGTCCCCGTGGGCTAGGATGCTA | + |
|
Preference number: 5 (lower is better) Translates to: AQPCLCARCHRLTES*FSLLLRRSPWARML Trigger: TAGCATCCTAGCCCACGGGGACCTTCGTAACAACAAGCTGAACCAACTCTCTGTCAACCTATGGCACCTGGCACAGAGACACGGCTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGGCTTCCATGATGCACTaGCAAACCTCCACCCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: VNGSQADLPGCGTGTPERASMMH*QTSTRT Trigger: TGTGCGGGTGGAGGTTTGCAAGTGCATCATGGAAGC...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGGAAGAAAGCATCAGCTaGGGAGAGGCACTGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VNGSQADLPGCGTGTPEREESIS*GEALVG Trigger: GCCAACCAGTGCCTCTCCCAAGCTGATGCTTTCTTC...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGGCCAGGTGCCATAGGTaGACAGAGAGTTGGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VNGSQADLPGCGTGTPERARCHR*TESWFS Trigger: GCTGAACCAACTCTCTGTCAACCTATGGCACCTGGC...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTTCCTTCAGAGACTGGTaGAGCTCCTCTATGCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSQADLPGCGTGTPERQVSFRDW*SSSMRF Trigger: GAACCGCATAGAGGAGCTCAACCAGTCTCTGAAGGA...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTCCTTCAGAGACTGGTaGAGCTCCTCTATGCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: MAAKQIFQDVALGLPKGKSFRDW*SSSMRF Trigger: GAACCGCATAGAGGAGCTCAACCAGTCTCTGAAGGA...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS GCA 90 bp | TTTTCAGGTGCTCCAGGATCTGAGCCATCACAGCCTCACACAGCTTaGTGTTCTCAGCCAGGAACTTGGAGTCTCCCCCGTACAAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FSGAPGSEPSQPHTA*CSQPGTWSLPRTSC Trigger: ACAGCTTGTACGGGGGAGACTCCAAGTTCCTGGCTGAGAACAGCAAGCTGTGTGAGGCTGTGATGGCTCAGATCCTGGAGCACCTGAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGTCCGGAGTCATGTGCTaGATGACGTCAGCCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: VNGSQADLPGCGTGTPERSGVMC*MTSART Trigger: TGTTCTGGCTGACGTCATCAAGCACATGACTCCGGA...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTCATCTGGCTTCCATGATGCACTaGCAAACCTCCACCCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: CVCQASIPLTEPYPSPHLASMMH*QTSTRT Trigger: TGTGCGGGTGGAGGTTTGCAAGTGCATCATGGAAGC...CAGATGAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CAA 90 bp | TGTGTCTGCCAGGCAAGCATTCCACTGACTGAGCCATATCCTTCGCCTCATCTGGAAGAAAGCATCAGCTaGGGAGAGGCACTGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CVCQASIPLTEPYPSPHLEESIS*GEALVG Trigger: GCCAACCAGTGCCTCTCCCAAGCTGATGCTTTCTTC...CAGATGAGGCGAAGGATATGGCTCAGTCAGTGGAATGCTTGCCTGGCAGACACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS CCA 90 bp | AGGTTGACAGAGAGTTGGTTCAGCTTGTTGTTACGAAGGTCCCCGTaGGCTAGGATGCTATTGAAGAAGGAGAGGCCCAGCAGGCTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLTESWFSLLLRRSP*ARMLLKKERPSRLC Trigger: ACAGAGCCTGCTGGGCCTCTCCTTCTTCAATAGCATCCTAGCCCACGGGGACCTTCGTAACAACAAGCTGAACCAACTCTCTGTCAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGGAGTCGTGCATTGTCTaGCAAATGTGCAAAAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: MAAKQIFQDVALGLPKGKESCIV*QMCKRA Trigger: TGCCCTTTTGCACATTTGCAAGACAATGCACGACTC...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTAGAACAGGTTCCAGGTaGCAAAACATAGACCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GSQADLPGCGTGTPERQVRTGSR*QNIDLD Trigger: GTCCAGGTCTATGTTTTGCAACCTGGAACCTGTTCT...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGAGAACAGGTTCCAGGTaGCAAAACATAGACCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: MAAKQIFQDVALGLPKGKRTGSR*QNIDLD Trigger: GTCCAGGTCTATGTTTTGCAACCTGGAACCTGTTCT...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | ACTCACTCTGTAGACCAACCTGACCTTGAACTCAGAAATCCACCTGCCTCTGCCTTCTCAGCCAGGAACTaGGAGTCTCCCCCGTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: THSVDQPDLELRNPPASAFSARN*ESPPYK Trigger: CTTGTACGGGGGAGACTCCAAGTTCCTGGCTGAGAA...GGCAGAGGCAGGTGGATTTCTGAGTTCAAGGTCAGGTTGGTCTACAGAGTGAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS GCA 90 bp | TCAAGAGTGAGAGCGTTCACGGAGTCGTGCATTGTCTTGCAAATGTaGAAAAGGGCATTGAGGATGACAGGGTCCTTGGTTGGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRVRAFTESCIVLQM*KRALRMTGSLVGSC Trigger: GCAGGAGCCAACCAAGGACCCTGTCATCCTCAATGCCCTTTTGCACATTTGCAAGACAATGCACGACTCCGTGAACGCTCTCACTCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000149749.3 |
||
| CDS CCA 90 bp | GAGCCATCACAGCCTCACACAGCTTGCTGTTCTCAGCCAGGAACTTaGAGTCTCCCCCGTACAAGCTGTCATTGGAGTCAACTTTGTCTA | + |
|
Preference number: 5 (lower is better) Translates to: EPSQPHTACCSQPGT*SLPRTSCHWSQLCL Trigger: TAGACAAAGTTGACTCCAATGACAGCTTGTACGGGGGAGACTCCAAGTTCCTGGCTGAGAACAGCAAGCTGTGTGAGGCTGTGATGGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTTCTGAAATCCCCGTTTaGGAGAGGAACTTGTTACAC | + |
|
Preference number: 5 (lower is better) Translates to: GSQADLPGCGTGTPERQVSEIPV*ERNLLH Trigger: GTGTAACAAGTTCCTCTCCAAAACGGGGATTTCAGA...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGGAGTCGTGCATTGTCTaGCAAATGTGCAAAAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VNGSQADLPGCGTGTPERESCIV*QMCKRA Trigger: TGCCCTTTTGCACATTTGCAAGACAATGCACGACTC...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 |
||
| CDS-3UTR CAA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGAGAACAGGTTCCAGGTaGCAAAACATAGACCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VNGSQADLPGCGTGTPERRTGSR*QNIDLD Trigger: GTCCAGGTCTATGTTTTGCAACCTGGAACCTGTTCT...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTAAGGTAGAGAAGAAATaGCACAGGAATTCCAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSQADLPGCGTGTPERQVKVEKK*HRNSSR Trigger: CCTACTGGAATTCCTGTGCAATTTCTTCTCTACCTT...AACTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | ATTCCTGCCTTGCCACAGGCCCATGAAGTGGAAACTTCAGGGTTCTTTGGAAAGTCCTTCAGAGACTGGTaGAGCTCCTCTATGCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: IPALPQAHEVETSGFFGKSFRDW*SSSMRF Trigger: GAACCGCATAGAGGAGCTCAACCAGTCTCTGAAGGA...CTTTCCAAAGAACCCTGAAGTTTCCACTTCATGGGCCTGTGGCAAGGCAGGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175922.8 |
||
| CDS TCA 90 bp | AGGCCCGGACAAACGCAGCTGTCTTTCTGGAGTGGTTTCCCTTCATaGCTTTCCTTGTTTCCATTGCCAACCGGTTCACACTATGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: RPGQTQLSFWSGFPS*LSLFPLPTGSHYGS Trigger: TGATCCATAGTGTGAACCGGTTGGCAATGGAAACAAGGAAAGTCATGAAGGGAAACCACTCCAGAAAGACAGCTGCGTTTGTCCGGGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGATTTTTATAAATCCATaGATCAAGTGGGCCAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: MAAKQIFQDVALGLPKGKIFINP*IKWASV Trigger: GACGCTGGCCCACTTGATCAATGGATTTATAAAAAT...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | GCCAACAGCTGGAAACAGCTGATTTTCATAGCCCAGGTTGACCTTAAACTCATGAGGCCGATGGCGGCTTaGAAGAAAGCATCAGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ANSWKQLIFIAQVDLKLMRPMAA*KKASAW Trigger: CCAAGCTGATGCTTTCTTCAAAGCCGCCATCGGCCT...CATGAGTTTAAGGTCAACCTGGGCTATGAAAATCAGCTGTTTCCAGCTGTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CAA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGAAGGTAGAGAAGAAATaGCACAGGAATTCCAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VNGSQADLPGCGTGTPERKVEKK*HRNSSR Trigger: CCTACTGGAATTCCTGTGCAATTTCTTCTCTACCTT...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | GCCAACAGCTGGAAACAGCTGATTTTCATAGCCCAGGTTGACCTTAAACTCATGACAGCCTCACACAGCTaGCTGTTCTCAGCCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ANSWKQLIFIAQVDLKLMTASHS*LFSARN Trigger: GTTCCTGGCTGAGAACAGCAAGCTGTGTGAGGCTGT...CATGAGTTTAAGGTCAACCTGGGCTATGAAAATCAGCTGTTTCCAGCTGTTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CAA 90 bp | GTTTTTGAGACTGGGGCTCATATATCCCAGACCAGCTTCAAACATGTAACTGGGTTCAGAGCCTCGTCTTaGGCCAGGGTTTTCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VFETGAHISQTSFKHVTGFRASS*ARVFRC Trigger: GCACCTGAAAACCCTGGCCAAAGACGAGGCTCTGAA...CCCAGTTACATGTTTGAAGCTGGTCTGGGATATATGAGCCCCAGTCTCAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CAA 90 bp | ATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGCAAGTTCAACAGCAAAGCATaGTTCCCTAGTTTCTTACAT | + |
|
Preference number: 5 (lower is better) Translates to: MAAKQIFQDVALGLPKGKFNSKA*FPSFLH Trigger: ATGTAAGAAACTAGGGAACAATGCTTTGCTGTTGAA...CTTGCCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTGCTTCCATGATGCACTaGCAAACCTCCACCCGCACA | + |
|
Preference number: 5 (lower is better) Translates to: PFCCQNSQVEGKSLKPICASMMH*QTSTRT Trigger: TGTGCGGGTGGAGGTTTGCAAGTGCATCATGGAAGC...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | GTTAATGGCAGCCAAGCAGATCTTCCAGGATGTGGCACTGGGACTCCCGAAAGGATTTTTATAAATCCATaGATCAAGTGGGCCAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: VNGSQADLPGCGTGTPERIFINP*IKWASV Trigger: GACGCTGGCCCACTTGATCAATGGATTTATAAAAAT...CCTTTCGGGAGTCCCAGTGCCACATCCTGGAAGATCTGCTTGGCTGCCATTAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCGAAGAAAGCATCAGCTaGGGAGAGGCACTGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIEESIS*GEALVG Trigger: GCCAACCAGTGCCTCTCCCAAGCTGATGCTTTCTTC...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTGAAGAAAGCATCAGCTaGGGAGAGGCACTGGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PFCCQNSQVEGKSLKPICEESIS*GEALVG Trigger: GCCAACCAGTGCCTCTCCCAAGCTGATGCTTTCTTC...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTTTCTCAGCCAGGAACTaGGAGTCTCCCCCGTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: PFCCQNSQVEGKSLKPICFSARN*ESPPYK Trigger: CTTGTACGGGGGAGACTCCAAGTTCCTGGCTGAGAA...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTTCTCAGCCAGGAACTaGGAGTCTCCCCCGTACAAG | + |
|
Preference number: 5 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIFSARN*ESPPYK Trigger: CTTGTACGGGGGAGACTCCAAGTTCCTGGCTGAGAA...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCACAGCCTCACACAGCTaGCTGTTCTCAGCCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FPFCCQNSQVEGKSLKPITASHS*LFSARN Trigger: GTTCCTGGCTGAGAACAGCAAGCTGTGTGAGGCTGT...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTACAGCCTCACACAGCTaGCTGTTCTCAGCCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PFCCQNSQVEGKSLKPICTASHS*LFSARN Trigger: GTTCCTGGCTGAGAACAGCAAGCTGTGTGAGGCTGT...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS TCA 90 bp | TTTTGTCATCACTACTGTCCTCCCAGGTGTAGTCCTGGATCACGTTaGGAAGTTCTCGAACCAGAAATAGGACTCCGTGCTCTGGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: FCHHYCPPRCSPGSR*EVLEPEIGLRALDD Trigger: ATCATCCAGAGCACGGAGTCCTATTTCTGGTTCGAGAACTTCTCAACGTGATCCAGGACTACACCTGGGAGGACAGTAGTGATGACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS TCA 90 bp | AGGCCCGGACAAACGCAGCTGTCTTTCTGGAGTGGTTTCCCTTCATaGCTTTCCTTGTTTCCATTGCCAACCGGTTCACACTCATTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RPGQTQLSFWSGFPS*LSLFPLPTGSHSFL Trigger: TAAAAATGAGTGTGAACCGGTTGGCAATGGAAACAAGGAAAGTCATGAAGGGAAACCACTCCAGAAAGACAGCTGCGTTTGTCCGGGCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149749.3 |
||
| CDS-3UTR CAA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTTTCAGGCATGTCTCCTaGGCTGTGTCGTTCACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: PFCCQNSQVEGKSLKPICFRHVS*AVSFTF Trigger: GAACGTGAACGACACAGCCAAGGAGACATGCCTGAA...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTTCAGGCATGTCTCCTaGGCTGTGTCGTTCACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIFRHVS*AVSFTF Trigger: GAACGTGAACGACACAGCCAAGGAGACATGCCTGAA...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTCCGGAGTCATGTGCTaGATGACGTCAGCCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: FPFCCQNSQVEGKSLKPISGVMC*MTSART Trigger: TGTTCTGGCTGACGTCATCAAGCACATGACTCCGGA...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTTCCGGAGTCATGTGCTaGATGACGTCAGCCAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: PFCCQNSQVEGKSLKPICSGVMC*MTSART Trigger: TGTTCTGGCTGACGTCATCAAGCACATGACTCCGGA...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTCCTTCAGAGACTGGTaGAGCTCCTCTATGCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: FPFCCQNSQVEGKSLKPISFRDW*SSSMRF Trigger: GAACCGCATAGAGGAGCTCAACCAGTCTCTGAAGGA...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | TTTGTTTTTGAGACTGGGGCTCATATATCCCAGACCAGCTTCAAACATGTAACTGCCAGGTGCCATAGGTaGACAGAGAGTTGGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FVFETGAHISQTSFKHVTARCHR*TESWFS Trigger: GCTGAACCAACTCTCTGTCAACCTATGGCACCTGGC...AGTTACATGTTTGAAGCTGGTCTGGGATATATGAGCCCCAGTCTCAAAAACAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS CCA 90 bp | GCTTCCATGATGCACTTGCAAACCTCCACCCGCACACTCTCTTTCTaGAACATGTCCAGAAATGGTAGAAACTTTTCCACTGAGAAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: ASMMHLQTSTRTLSF*NMSRNGRNFSTEKR Trigger: TCTTTTCTCAGTGGAAAAGTTTCTACCATTTCTGGACATGTTCCAGAAAGAGAGTGTGCGGGTGGAGGTTTGCAAGTGCATCATGGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 ENSMUST00000149749.3 |
||
| CDS CCA 90 bp | AAATCACGGCCAAAGGACACCATTTTTATAAATCCATTGATCAAGTaGGCCAGCGTCCTTTTCTCATCCTCAAGAGTGAGAGCGTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: KSRPKDTIFINPLIK*ASVLFSSSRVRAFT Trigger: CGTGAACGCTCTCACTCTTGAGGATGAGAAAAGGACGCTGGCCCACTTGATCAATGGATTTATAAAAATGGTGTCCTTTGGCCGTGATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 |
||
| CDS CCA 90 bp | ATTGCCAACCGGTTCACACTCATTTTTATAAATCCATTGATCAAGTaGGCCAGCGTCCTTTTCTCATCCTCAAGAGTGAGAGCGTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: IANRFTLIFINPLIK*ASVLFSSSRVRAFT Trigger: CGTGAACGCTCTCACTCTTGAGGATGAGAAAAGGACGCTGGCCCACTTGATCAATGGATTTATAAAAATGAGTGTGAACCGGTTGGCAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149749.3 |
||
| CDS-3UTR CAA 90 bp | AGGCGTGCACCGCCACCACCTGGCTGTAACTCTGCTCTTAAACTAGTAAAGACATTCAACAGCAAAGCATaGTTCCCTAGTTTCTTACAT | + |
|
Preference number: 5 (lower is better) Translates to: RRAPPPPGCNSALKLVKTFNSKA*FPSFLH Trigger: ATGTAAGAAACTAGGGAACAATGCTTTGCTGTTGAA...TGTCTTTACTAGTTTAAGAGCAGAGTTACAGCCAGGTGGTGGCGGTGCACGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CAA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCGAGTCGTGCATTGTCTaGCAAATGTGCAAAAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FPFCCQNSQVEGKSLKPIESCIV*QMCKRA Trigger: TGCCCTTTTGCACATTTGCAAGACAATGCACGACTC...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTAGAACAGGTTCCAGGTaGCAAAACATAGACCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PFCCQNSQVEGKSLKPICRTGSR*QNIDLD Trigger: GTCCAGGTCTATGTTTTGCAACCTGGAACCTGTTCT...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATAACAGCCTCACACAGCTaGCTGTTCTCAGCCAGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: FCCQNSQVEGKSLKPICITASHS*LFSARN Trigger: GTTCCTGGCTGAGAACAGCAAGCTGTGTGAGGCTGT...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | TTTGGTGAAATAAAGGCCATTTGGGAGTATTTGAACAGCACCATAGTGCATTCTTGGGCTAGGATGCTATaGAAGAAGGAGAGGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FGEIKAIWEYLNSTIVHSWARML*KKERPS Trigger: GCTGGGCCTCTCCTTCTTCAATAGCATCCTAGCCCA...AGAATGCACTATGGTGCTGTTCAAATACTCCCAAATGGCCTTTATTTCACCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CAA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATATGGGCTAGGATGCTATaGAAGAAGGAGAGGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FCCQNSQVEGKSLKPICIWARML*KKERPS Trigger: GCTGGGCCTCTCCTTCTTCAATAGCATCCTAGCCCA...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATAGCCAGGTGCCATAGGTaGACAGAGAGTTGGTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: FCCQNSQVEGKSLKPICIARCHR*TESWFS Trigger: GCTGAACCAACTCTCTGTCAACCTATGGCACCTGGC...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTCGGATGGAAGCGATCTaGAAAAACCAATTCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PFCCQNSQVEGKSLKPICRMEAI*KNQFRH Trigger: ATGCCTGAATTGGTTTTTCAAGATCGCTTCCATCCG...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | TCAGCCAACAGCTGGAAACAGCTGATTTTCATAGCCCAGGTTGACCTTAAACTCGTTTTGGAGAGGAACTaGTTACACTTCAGGATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SANSWKQLIFIAQVDLKLVLERN*LHFRMD Trigger: ATCCATCCTGAAGTGTAACAAGTTCCTCTCCAAAAC...GAGTTTAAGGTCAACCTGGGCTATGAAAATCAGCTGTTTCCAGCTGTTGGCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CAA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTCTGAAATCCCCGTTTaGGAGAGGAACTTGTTACAC | + |
|
Preference number: 5 (lower is better) Translates to: FPFCCQNSQVEGKSLKPISEIPV*ERNLLH Trigger: GTGTAACAAGTTCCTCTCCAAAACGGGGATTTCAGA...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCCTTTCCTTGTTTCCATaGCCAACCGGTTCACACTAT | + |
|
Preference number: 5 (lower is better) Translates to: FPFCCQNSQVEGKSLKPILSLFP*PTGSHY Trigger: ATAGTGTGAACCGGTTGGCAATGGAAACAAGGAAAG...GATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS TCA 90 bp | GGACTCTTCAGTTTAGTGATGACTTTCCAAGCTTCATTGAGAATCTaGAGTCGATCGTTCTCAGGAGGATCAGCCAAAGCCAAGTTTAAC | + |
|
Preference number: 5 (lower is better) Translates to: GLFSLVMTFQASLRI*SRSFSGGSAKAKFN Trigger: GTTAAACTTGGCTTTGGCTGATCCTCCTGAGAACGATCGACTTCAGATTCTCAATGAAGCTTGGAAAGTCATCACTAAACTGAAGAGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS CCA 90 bp | AAATCACGGCCAAAGGACACCATTTTTATAAATCCATTGATCAAGTaGGCCAGCGTCCTTTTCTCATCCTCAAGAGTGAGAGCGTTGATA | + |
|
Preference number: 5 (lower is better) Translates to: KSRPKDTIFINPLIK*ASVLFSSSRVRALI Trigger: TATCAACGCTCTCACTCTTGAGGATGAGAAAAGGACGCTGGCCCACTTGATCAATGGATTTATAAAAATGGTGTCCTTTGGCCGTGATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTGTTTTGGAGAGGAACTaGTTACACTTCAGGATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: PFCCQNSQVEGKSLKPICVLERN*LHFRMD Trigger: ATCCATCCTGAAGTGTAACAAGTTCCTCTCCAAAAC...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | GAAATAAAGGCCATTTGGGAGTATTTGAACAGCACCATAGTGCATTCTGGGTTCTCTGAAATCCCCGTTTaGGAGAGGAACTTGTTACAC | + |
|
Preference number: 5 (lower is better) Translates to: EIKAIWEYLNSTIVHSGFSEIPV*ERNLLH Trigger: GTGTAACAAGTTCCTCTCCAAAACGGGGATTTCAGA...GAACCCAGAATGCACTATGGTGCTGTTCAAATACTCCCAAATGGCCTTTATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CAA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTAAGGTAGAGAAGAAATaGCACAGGAATTCCAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: PFCCQNSQVEGKSLKPICKVEKK*HRNSSR Trigger: CCTACTGGAATTCCTGTGCAATTTCTTCTCTACCTT...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCTTCAGAGCCTCGTCTTaGGCCAGGGTTTTCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: KITKTSKFQEELMAAKQIFRASS*ARVFRC Trigger: GCACCTGAAAACCCTGGCCAAAGACGAGGCTCTGAA...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCTGGGCTAGGATGCTATaGAAGAAGGAGAGGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: KITKTSKFQEELMAAKQIWARML*KKERPS Trigger: GCTGGGCCTCTCCTTCTTCAATAGCATCCTAGCCCA...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCTTCAGGCATGTCTCCTaGGCTGTGTCGTTCACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: KITKTSKFQEELMAAKQIFRHVS*AVSFTF Trigger: GAACGTGAACGACACAGCCAAGGAGACATGCCTGAA...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATACGGATGGAAGCGATCTaGAAAAACCAATTCAGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: FCCQNSQVEGKSLKPICIRMEAI*KNQFRH Trigger: ATGCCTGAATTGGTTTTTCAAGATCGCTTCCATCCG...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTTTCAACAGCAAAGCATaGTTCCCTAGTTTCTTACAT | + |
|
Preference number: 5 (lower is better) Translates to: PFCCQNSQVEGKSLKPICFNSKA*FPSFLH Trigger: ATGTAAGAAACTAGGGAACAATGCTTTGCTGTTGAA...ACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAAGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | TTCTGCTGTCAGAATAGCCAAGTAGAAGGCAAGAGCTTAAAACCAATCTGTATACTTTCCTTGTTTCCATaGCCAACCGGTTCACACTAT | + |
|
Preference number: 5 (lower is better) Translates to: FCCQNSQVEGKSLKPICILSLFP*PTGSHY Trigger: ATAGTGTGAACCGGTTGGCAATGGAAACAAGGAAAG...TATACAGATTGGTTTTAAGCTCTTGCCTTCTACTTGGCTATTCTGACAGCAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
||
| CDS GCA 90 bp | TGTCTTTCTGGAGTGGTTTCCCTTCATGACTTTCCTTGTTTCCATTaGCAACCGGTTCACACTCATTTTTATAAATCCATTGATCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: CLSGVVSLHDFPCFH*QPVHTHFYKSIDQV Trigger: CACTTGATCAATGGATTTATAAAAATGAGTGTGAACCGGTTGGCAATGGAAACAAGGAAAGTCATGAAGGGAAACCACTCCAGAAAGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149749.3 |
||
| CDS-3UTR CAA 90 bp | TTTGGTGAAATAAAGGCCATTTGGGAGTATTTGAACAGCACCATAGTGCATTCTAAGGTAGAGAAGAAATaGCACAGGAATTCCAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: FGEIKAIWEYLNSTIVHSKVEKK*HRNSSR Trigger: CCTACTGGAATTCCTGTGCAATTTCTTCTCTACCTT...AGAATGCACTATGGTGCTGTTCAAATACTCCCAAATGGCCTTTATTTCACCAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000059390.13 |
||
| CDS-3UTR CAA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCTCTGAAATCCCCGTTTaGGAGAGGAACTTGTTACAC | + |
|
Preference number: 5 (lower is better) Translates to: KITKTSKFQEELMAAKQISEIPV*ERNLLH Trigger: GTGTAACAAGTTCCTCTCCAAAACGGGGATTTCAGA...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCGTTTTGGAGAGGAACTaGTTACACTTCAGGATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: KITKTSKFQEELMAAKQIVLERN*LHFRMD Trigger: ATCCATCCTGAAGTGTAACAAGTTCCTCTCCAAAAC...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCATTTTTATAAATCCATaGATCAAGTGGGCCAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: KITKTSKFQEELMAAKQIIFINP*IKWASV Trigger: GACGCTGGCCCACTTGATCAATGGATTTATAAAAAT...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS-3UTR CAA 90 bp | AAAATAACAAAAACTTCTAAATTCCAGGAAGAGTTAATGGCAGCCAAGCAGATCTTCAACAGCAAAGCATaGTTCCCTAGTTTCTTACAT | + |
|
Preference number: 5 (lower is better) Translates to: KITKTSKFQEELMAAKQIFNSKA*FPSFLH Trigger: ATGTAAGAAACTAGGGAACAATGCTTTGCTGTTGAA...GATCTGCTTGGCTGCCATTAACTCTTCCTGGAATTTAGAAGTTTTTGTTATTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS CCA 72 bp | TTCCTGTGGCTGCCGGGTCCGAGGTGGCTGCAAACATaGAGAGCGGGTCGGTGCCATCGAGGACGCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: FLWLPGPRWLQT*RAGRCHRGRCS Trigger: TGAGCAGCGTCCTCGATGGCACCGACCCGCTCTCCATGTTTGCAGCCACCTCGGACCCGGCAGCCACAGGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 ENSMUST00000175922.8 |
||
| CDS GCA 72 bp | GGTCCGAGGTGGCTGCAAACATGGAGAGCGGGTCGGTaGCATCGAGGACGCTGCTCAGAGGATCGATCACGG | + |
|
Preference number: 6 (lower is better) Translates to: GPRWLQTWRAGR*HRGRCSEDRSR Trigger: CCGTGATCGATCCTCTGAGCAGCGTCCTCGATGGCACCGACCCGCTCTCCATGTTTGCAGCCACCTCGGACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 ENSMUST00000175922.8 |
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| CDS GCA 72 bp | TGTGACTGTTCCTGTGGCTGCCGGGTCCGAGGTGGCTaGAAACATGGAGAGCGGGTCGGTGCCATCGAGGAC | + |
|
Preference number: 6 (lower is better) Translates to: CDCSCGCRVRGG*KHGERVGAIED Trigger: GTCCTCGATGGCACCGACCCGCTCTCCATGTTTGCAGCCACCTCGGACCCGGCAGCCACAGGAACAGTCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 ENSMUST00000175922.8 |
||
| CDS GCA 72 bp | CAAACATGGAGAGCGGGTCGGTGCCATCGAGGACGCTaGTCAGAGGATCGATCACGGAGCTGGAAGAGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: QTWRAGRCHRGR*SEDRSRSWKRR Trigger: CCTCCTCTTCCAGCTCCGTGATCGATCCTCTGAGCAGCGTCCTCGATGGCACCGACCCGCTCTCCATGTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 ENSMUST00000175922.8 |
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| CDS CCA 72 bp | GGCCCAGCAGGCTCTGTCGCTTCAGAGCCTCGTCTTTaGCCAGGGTTTTCAGGTGCTCCAGGATCTGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GPAGSVASEPRL*PGFSGAPGSEP Trigger: TGGCTCAGATCCTGGAGCACCTGAAAACCCTGGCCAAAGACGAGGCTCTGAAGCGACAGAGCCTGCTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS TCA 72 bp | GGGCGTACACGGACACGAGTGGGTCTCCGATCCCTCTaGTCATGCAGGTTAGTCGGGGCAGGCACTCTGAAA | + |
|
Preference number: 6 (lower is better) Translates to: GRTRTRVGLRSL*SCRLVGAGTLK Trigger: TTTCAGAGTGCCTGCCCCGACTAACCTGCATGATCAGAGGGATCGGAGACCCACTCGTGTCCGTGTACGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS CCA 72 bp | CGACGGCCGCAGCTTCCCATCGATGCTTATCGTCTTTaGGACTTCGGGAACGAGGCCGATGGCGGCTTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: RRPQLPIDAYRL*DFGNEADGGFE Trigger: TTCAAAGCCGCCATCGGCCTCGTTCCCGAAGTCCCAAAGACGATAAGCATCGATGGGAAGCTGCGGCCGTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS GCA 72 bp | GCAAGGCACTGCGGCTGTCCACACACATCGAGGAGATaGGCTCATAGACCAGCTTTCCATGTCCTGCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: ARHCGCPHTSRR*AHRPAFHVLPA Trigger: TGCTGGCAGGACATGGAAAGCTGGTCTATGAGCGCATCTCCTCGATGTGTGTGGACAGCCGCAGTGCCTTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033280.14 |
||
| CDS GCA 72 bp | GCTCCAGGATCTGAGCCATCACAGCCTCACACAGCTTaGTGTTCTCAGCCAGGAACTTGGAGTCTCCCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: APGSEPSQPHTA*CSQPGTWSLPR Trigger: ACGGGGGAGACTCCAAGTTCCTGGCTGAGAACAGCAAGCTGTGTGAGGCTGTGATGGCTCAGATCCTGGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS CCA 72 bp | GAGCGTGGTAGGAGACACACTGGAAGATCCAGCCCATaGCAGGCGAGTACAGAGGGAGATAGGACAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ERGRRHTGRSSP*QASTEGDRTAA Trigger: AGCTGCTGTCCTATCTCCCTCTGTACTCGCCTGCCATGGGCTGGATCTTCCAGTGTGTCTCCTACCACGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
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| CDS CAA 90 bp | TGGTTCAGCTTGTTGTTACGAAGGTCCCCGTGGGCTAGGATGCTATaGAAGAAGGAGAGGCCCAGCAGGCTCTGTCGCTTCAGAGCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: WFSLLLRRSPWARML*KKERPSRLCRFRAS Trigger: CGAGGCTCTGAAGCGACAGAGCCTGCTGGGCCTCTCCTTCTTCAATAGCATCCTAGCCCACGGGGACCTTCGTAACAACAAGCTGAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS TCA 72 bp | TCTTTGGGACTTCGGGAACGAGGCCGATGGCGGCTTTaGAGAAAGCATCAGCTTGGGAGAGGCACTGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: SLGLRERGRWRL*RKHQLGRGTGW Trigger: CCAACCAGTGCCTCTCCCAAGCTGATGCTTTCTTCAAAGCCGCCATCGGCCTCGTTCCCGAAGTCCCAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS CCA 72 bp | CAGGCATGTCTCCTTGGCTGTGTCGTTCACGTTCTCTaGGGAGAAATGATCTGGCAAGGCACTGCGGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: QACLLGCVVHVL*GEMIWQGTAAV Trigger: GACAGCCGCAGTGCCTTGCCAGATCATTTCTCCCCAGAGAACGTGAACGACACAGCCAAGGAGACATGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS CAA 72 bp | GTCTTTGGGACTTCGGGAACGAGGCCGATGGCGGCTTaGAAGAAAGCATCAGCTTGGGAGAGGCACTGGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VFGTSGTRPMAA*KKASAWERHWL Trigger: CAACCAGTGCCTCTCCCAAGCTGATGCTTTCTTCAAAGCCGCCATCGGCCTCGTTCCCGAAGTCCCAAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS TCA 72 bp | TCCTTGGCTGTGTCGTTCACGTTCTCTGGGGAGAAATaGTCTGGCAAGGCACTGCGGCTGTCCACACACATC | + |
|
Preference number: 6 (lower is better) Translates to: SLAVSFTFSGEK*SGKALRLSTHI Trigger: GATGTGTGTGGACAGCCGCAGTGCCTTGCCAGATCATTTCTCCCCAGAGAACGTGAACGACACAGCCAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS TCA 72 bp | TGTTGTTACGAAGGTCCCCGTGGGCTAGGATGCTATTaGAGAAGGAGAGGCCCAGCAGGCTCTGTCGCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CCYEGPRGLGCY*RRRGPAGSVAS Trigger: TGAAGCGACAGAGCCTGCTGGGCCTCTCCTTCTTCAATAGCATCCTAGCCCACGGGGACCTTCGTAACAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS CAA 72 bp | AGCAGGAAGTCAAAGAAGTTCTTATTGAGGCTCTCCTaGAGGTGCGGGGCCACTTCGATCCCCACCCGACAC | + |
|
Preference number: 6 (lower is better) Translates to: SRKSKKFLLRLS*RCGATSIPTRH Trigger: GTGTCGGGTGGGGATCGAAGTGGCCCCGCACCTCAAGGAGAGCCTCAATAAGAACTTCTTTGACTTCCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
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| CDS CAA 72 bp | GTAGTTGTGTACCGGGCAAGGATTTCCACACGTTTGTaGGCCCAGGGCTCGAAATCAGGTCCCACGAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: VVVYRARISTRL*AQGSKSGPTKE Trigger: CTCCTTCGTGGGACCTGATTTCGAGCCCTGGGCCAACAAACGTGTGGAAATCCTTGCCCGGTACACAACTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 ENSMUST00000175922.8 |
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| CDS TCA 72 bp | TCGTCTTTGGCCAGGGTTTTCAGGTGCTCCAGGATCTaGGCCATCACAGCCTCACACAGCTTGCTGTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSLARVFRCSRI*AITASHSLLFS Trigger: TGAGAACAGCAAGCTGTGTGAGGCTGTGATGGCTCAGATCCTGGAGCACCTGAAAACCCTGGCCAAAGACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS GCA 72 bp | GCAAGGCACTGCGGCTGTCCACACACATCGAGGAGATaGGCTCATAGACCAGCTTTCCAAACGTATCAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: ARHCGCPHTSRR*AHRPAFQTYQG Trigger: TCCTTGATACGTTTGGAAAGCTGGTCTATGAGCGCATCTCCTCGATGTGTGTGGACAGCCGCAGTGCCTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS CCA 72 bp | CAGCCTCACACAGCTTGCTGTTCTCAGCCAGGAACTTaGAGTCTCCCCCGTACAAGCTGTCATTGGAGTCAA | + |
|
Preference number: 6 (lower is better) Translates to: QPHTACCSQPGT*SLPRTSCHWSQ Trigger: TTGACTCCAATGACAGCTTGTACGGGGGAGACTCCAAGTTCCTGGCTGAGAACAGCAAGCTGTGTGAGGCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS CCA 72 bp | TGTCTCTGTGCCAGGTGCCATAGGTTGACAGAGAGTTaGTTCAGCTTGTTGTTACGAAGGTCCCCGTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CLCARCHRLTES*FSLLLRRSPWA Trigger: AGCCCACGGGGACCTTCGTAACAACAAGCTGAACCAACTCTCTGTCAACCTATGGCACCTGGCACAGAGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS CAA 72 bp | AGGAGATGCTTGGGGAAGCCGGACTCGTCACACTCTTaGATCATGCCGATGAAGTCCATAGACCTGGTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: RRCLGKPDSSHS*IMPMKSIDLVA Trigger: TGCCACCAGGTCTATGGACTTCATCGGCATGATCAAAGAGTGTGACGAGTCCGGCTTCCCCAAGCATCTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS CAA 72 bp | ACAGCCTCACACAGCTTGCTGTTCTCAGCCAGGAACTaGGAGTCTCCCCCGTACAAGCTGTCATTGGAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: TASHSLLFSARN*ESPPYKLSLES Trigger: TGACTCCAATGACAGCTTGTACGGGGGAGACTCCAAGTTCCTGGCTGAGAACAGCAAGCTGTGTGAGGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS CAA 72 bp | GCCAGGTGCCATAGGTTGACAGAGAGTTGGTTCAGCTaGTTGTTACGAAGGTCCCCGTGGGCTAGGATGCTA | + |
|
Preference number: 6 (lower is better) Translates to: ARCHRLTESWFS*LLRRSPWARML Trigger: TAGCATCCTAGCCCACGGGGACCTTCGTAACAACAAGCTGAACCAACTCTCTGTCAACCTATGGCACCTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS CAA 72 bp | TCTGTAGTTGTGTACCGGGCAAGGATTTCCACACGTTaGTTGGCCCAGGGCTCGAAATCAGGTCCCACGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SVVVYRARISTR*LAQGSKSGPTK Trigger: CTTCGTGGGACCTGATTTCGAGCCCTGGGCCAACAAACGTGTGGAAATCCTTGCCCGGTACACAACTACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 ENSMUST00000175922.8 |
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| CDS CAA 90 bp | AGCTTCTCTGTAGTTGTGTACCGGGCAAGGATTTCCACACGTTTGTaGGCCCAGGGCTCGAAATCAGGTCCCACGAAGGAGTTCTCATCC | + |
|
Preference number: 6 (lower is better) Translates to: SFSVVVYRARISTRL*AQGSKSGPTKEFSS Trigger: GGATGAGAACTCCTTCGTGGGACCTGATTTCGAGCCCTGGGCCAACAAACGTGTGGAAATCCTTGCCCGGTACACAACTACAGAGAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 ENSMUST00000175922.8 |
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| CDS CAA 90 bp | GACAGCTTCTCTGTAGTTGTGTACCGGGCAAGGATTTCCACACGTTaGTTGGCCCAGGGCTCGAAATCAGGTCCCACGAAGGAGTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: DSFSVVVYRARISTR*LAQGSKSGPTKEFS Trigger: TGAGAACTCCTTCGTGGGACCTGATTTCGAGCCCTGGGCCAACAAACGTGTGGAAATCCTTGCCCGGTACACAACTACAGAGAAGCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 ENSMUST00000175922.8 |
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| CDS TCA 72 bp | CTGCACAGCCGTGTCTCTGTGCCAGGTGCCATAGGTTaGCAGAGAGTTGGTTCAGCTTGTTGTTACGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: LHSRVSVPGAIG*QRVGSACCYEG Trigger: ACCTTCGTAACAACAAGCTGAACCAACTCTCTGTCAACCTATGGCACCTGGCACAGAGACACGGCTGTGCAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS TCA 72 bp | AGACGTGCTTCCTTTCCGGCTCACTTTCTTTGTCTTTaGCTCCGTGACAGTGATGGGCTTCAGCGGGTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RRASFPAHFLCL*LRDSDGLQRVV Trigger: TACCACCCGCTGAAGCCCATCACTGTCACGGAGTCAAAGACAAAGAAAGTGAGCCGGAAAGGAAGCACGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 ENSMUST00000175922.8 |
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| CDS CAA 72 bp | TCTGCACAGCCGTGTCTCTGTGCCAGGTGCCATAGGTaGACAGAGAGTTGGTTCAGCTTGTTGTTACGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SAQPCLCARCHR*TESWFSLLLRR Trigger: CCTTCGTAACAACAAGCTGAACCAACTCTCTGTCAACCTATGGCACCTGGCACAGAGACACGGCTGTGCAGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS CAA 90 bp | GCGTTCACGGAGTCGTGCATTGTCTTGCAAATGTGCAAAAGGGCATaGAGGATGACAGGGTCCTTGGTTGGCTCCTGCTGGTGCTTGATA | + |
|
Preference number: 6 (lower is better) Translates to: AFTESCIVLQMCKRA*RMTGSLVGSCWCLI Trigger: TATCAAGCACCAGCAGGAGCCAACCAAGGACCCTGTCATCCTCAATGCCCTTTTGCACATTTGCAAGACAATGCACGACTCCGTGAACGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000149749.3 |
||
| CDS CAA 90 bp | CTCTGTGCCAGGTGCCATAGGTTGACAGAGAGTTGGTTCAGCTTGTaGTTACGAAGGTCCCCGTGGGCTAGGATGCTATTGAAGAAGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LCARCHRLTESWFSL*LRRSPWARMLLKKE Trigger: CTCCTTCTTCAATAGCATCCTAGCCCACGGGGACCTTCGTAACAACAAGCTGAACCAACTCTCTGTCAACCTATGGCACCTGGCACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS CAA 90 bp | GAACGAAAAAGGAGATGCTTGGGGAAGCCGGACTCGTCACACTCTTaGATCATGCCGATGAAGTCCATAGACCTGGTGGCAACGAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: ERKRRCLGKPDSSHS*IMPMKSIDLVATNS Trigger: TGAGTTCGTTGCCACCAGGTCTATGGACTTCATCGGCATGATCAAAGAGTGTGACGAGTCCGGCTTCCCCAAGCATCTCCTTTTTCGTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
||
| CDS CAA 90 bp | TTGGTTGGCTCCTGCTGGTGCTTGATAAAGGCTTCCATGATGCACTaGCAAACCTCCACCCGCACACTCTCTTTCTGGAACATGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LVGSCWCLIKASMMH*QTSTRTLSFWNMSR Trigger: TCTGGACATGTTCCAGAAAGAGAGTGTGCGGGTGGAGGTTTGCAAGTGCATCATGGAAGCCTTTATCAAGCACCAGCAGGAGCCAACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000149749.3 |
||
| CDS CAA 90 bp | TGTCTCTGTGCCAGGTGCCATAGGTTGACAGAGAGTTGGTTCAGCTaGTTGTTACGAAGGTCCCCGTGGGCTAGGATGCTATTGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: CLCARCHRLTESWFS*LLRRSPWARMLLKK Trigger: CTTCTTCAATAGCATCCTAGCCCACGGGGACCTTCGTAACAACAAGCTGAACCAACTCTCTGTCAACCTATGGCACCTGGCACAGAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS TCA 72 bp | CATAGACCTGGTGGCAACGAACTCAGCCCTGAAAGCTaGCATCACGGAGTTCAACAGCAAAGCATTGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: HRPGGNELSPES*HHGVQQQSIVP Trigger: GGGAACAATGCTTTGCTGTTGAACTCCGTGATGTCAGCTTTCAGGGCTGAGTTCGTTGCCACCAGGTCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS TCA 72 bp | TCAAGTGGGCCAGCGTCCTTTTCTCATCCTCAAGAGTaGGAGCGTTCACGGAGTCGTGCATTGTCTTGCAAA | + |
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Preference number: 6 (lower is better) Translates to: SSGPASFSHPQE*ERSRSRALSCK Trigger: TTTGCAAGACAATGCACGACTCCGTGAACGCTCTCACTCTTGAGGATGAGAAAAGGACGCTGGCCCACTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000149749.3 |
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| CDS TCA 72 bp | CACTACTGTCCTCCCAGGTGTAGTCCTGGATCACGTTaGGAAGTTCTCGAACCAGAAATAGGACTCCGTGCT | + |
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Preference number: 6 (lower is better) Translates to: HYCPPRCSPGSR*EVLEPEIGLRA Trigger: AGCACGGAGTCCTATTTCTGGTTCGAGAACTTCTCAACGTGATCCAGGACTACACCTGGGAGGACAGTAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS CAA 72 bp | CAGGTTAGTCGGGGCAGGCACTCTGAAATCCCCGTTTaGGAGAGGAACTTGTTACACTTCAGGATGGATGCT | + |
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Preference number: 6 (lower is better) Translates to: QVSRGRHSEIPV*ERNLLHFRMDA Trigger: AGCATCCATCCTGAAGTGTAACAAGTTCCTCTCCAAAACGGGGATTTCAGAGTGCCTGCCCCGACTAACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS CAA 72 bp | TCCTGCTGGTGCTTGATAAAGGCTTCCATGATGCACTaGCAAACCTCCACCCGCACACTCTCTTTCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: SCWCLIKASMMH*QTSTRTLSFWN Trigger: GTTCCAGAAAGAGAGTGTGCGGGTGGAGGTTTGCAAGTGCATCATGGAAGCCTTTATCAAGCACCAGCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000149749.3 |
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| CDS TCA 72 bp | GAAATCGTGGAAGTGGGCGATGACTTTCTGAATGATTaGCTGGAGCTGGGGGTAAGAGTCCTCAAATGCTCG | + |
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Preference number: 6 (lower is better) Translates to: EIVEVGDDFLND*LELGVRVLKCS Trigger: CGAGCATTTGAGGACTCTTACCCCCAGCTCCAGTCAATCATTCAGAAAGTCATCGCCCACTTCCACGATTTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 ENSMUST00000149749.3 |
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| CDS CAA 72 bp | TCAAGAGTGAGAGCGTTCACGGAGTCGTGCATTGTCTaGCAAATGTGCAAAAGGGCATTGAGGATGACAGGG | + |
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Preference number: 6 (lower is better) Translates to: SRVRAFTESCIV*QMCKRALRMTG Trigger: CCCTGTCATCCTCAATGCCCTTTTGCACATTTGCAAGACAATGCACGACTCCGTGAACGCTCTCACTCTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000149749.3 |
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| CDS CAA 72 bp | AGAGTGAGAGCGTTGATAAAGGCTTCCATGATGCACTaGCAAACCTCCACCCGCACACTCTCTTTCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: RVRALIKASMMH*QTSTRTLSFWN Trigger: GTTCCAGAAAGAGAGTGTGCGGGTGGAGGTTTGCAAGTGCATCATGGAAGCCTTTATCAACGCTCTCACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106553.8 |
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| CDS CAA 90 bp | ATTGTCTTGCAAATGTGCAAAAGGGCATTGAGGATGACAGGGTCCTaGGTTGGCTCCTGCTGGTGCTTGATAAAGGCTTCCATGATGCAC | + |
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Preference number: 6 (lower is better) Translates to: IVLQMCKRALRMTGS*VGSCWCLIKASMMH Trigger: GTGCATCATGGAAGCCTTTATCAAGCACCAGCAGGAGCCAACCAAGGACCCTGTCATCCTCAATGCCCTTTTGCACATTTGCAAGACAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000149749.3 |
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| CDS CAA 90 bp | TTCTCATCCTCAAGAGTGAGAGCGTTCACGGAGTCGTGCATTGTCTaGCAAATGTGCAAAAGGGCATTGAGGATGACAGGGTCCTTGGTT | + |
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Preference number: 6 (lower is better) Translates to: FSSSRVRAFTESCIV*QMCKRALRMTGSLV Trigger: AACCAAGGACCCTGTCATCCTCAATGCCCTTTTGCACATTTGCAAGACAATGCACGACTCCGTGAACGCTCTCACTCTTGAGGATGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000149749.3 |
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| CDS CAA 90 bp | TCATCCTCAAGAGTGAGAGCGTTGATAAAGGCTTCCATGATGCACTaGCAAACCTCCACCCGCACACTCTCTTTCTGGAACATGTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: SSSRVRALIKASMMH*QTSTRTLSFWNMSR Trigger: TCTGGACATGTTCCAGAAAGAGAGTGTGCGGGTGGAGGTTTGCAAGTGCATCATGGAAGCCTTTATCAACGCTCTCACTCTTGAGGATGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106553.8 |
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| CDS TCA 72 bp | CAAACGCAGCTGTCTTTCTGGAGTGGTTTCCCTTCATaGCTTTCCTTGTTTCCATTGCCAACCGGTTCACAC | + |
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Preference number: 6 (lower is better) Translates to: QTQLSFWSGFPS*LSLFPLPTGSH Trigger: GTGTGAACCGGTTGGCAATGGAAACAAGGAAAGTCATGAAGGGAAACCACTCCAGAAAGACAGCTGCGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 ENSMUST00000149749.3 |
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| CDS GCA 72 bp | TTCTCATCCTCAAGAGTGAGAGCGTTCACGGAGTCGTaGATTGTCTTGCAAATGTGCAAAAGGGCATTGAGG | + |
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Preference number: 6 (lower is better) Translates to: FSSSRVRAFTES*IVLQMCKRALR Trigger: CCTCAATGCCCTTTTGCACATTTGCAAGACAATGCACGACTCCGTGAACGCTCTCACTCTTGAGGATGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000149749.3 |
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| CDS CCA 72 bp | CCAGGAACTTGGAGTCTCCCCCGTACAAGCTGTCATTaGAGTCAACTTTGTCTATGTGGTAAAGATAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: PGTWSLPRTSCH*SQLCLCGKDRC Trigger: ACACCTATCTTTACCACATAGACAAAGTTGACTCCAATGACAGCTTGTACGGGGGAGACTCCAAGTTCCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 |
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| CDS CAA 72 bp | TGTTTAAATGTCAGCAGGAAGTCAAAGAAGTTCTTATaGAGGCTCTCCTTGAGGTGCGGGGCCACTTCGATC | + |
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Preference number: 6 (lower is better) Translates to: CLNVSRKSKKFL*RLSLRCGATSI Trigger: GATCGAAGTGGCCCCGCACCTCAAGGAGAGCCTCAATAAGAACTTCTTTGACTTCCTGCTGACATTTAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106553.8 |
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| CDS CCA 72 bp | ATGCACTTGCAAACCTCCACCCGCACACTCTCTTTCTaGAACATGTCCAGAAATGGTAGAAACTTTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: MHLQTSTRTLSF*NMSRNGRNFST Trigger: AGTGGAAAAGTTTCTACCATTTCTGGACATGTTCCAGAAAGAGAGTGTGCGGGTGGAGGTTTGCAAGTGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000033280.14 ENSMUST00000059390.13 ENSMUST00000106552.8 ENSMUST00000106553.8 ENSMUST00000149749.3 |
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