Pregenerated sensors for VPS33B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030534Ensembl transcript IDs: ENSMUST00000032749.12, ENSMUST00000135053.8, ENSMUST00000150585.8, ENSMUST00000205864.2
Found 165 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTCCCCAGGAGCCTGCTCTGTTAGAAGCCCGGCTCTCCGCAGGTTaGAGAAGGTTAGCAGGTGCTCGGGGCCATAGCTCTGCAGATACT | + |
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Preference number: 1 (lower is better) Translates to: CPQEPALLEARLSAG*RRLAGARGHSSADT Trigger: AGTATCTGCAGAGCTATGGCCCCGAGCACCTGCTAACCTTCTCCAACCTGCGGAGAGCCGGGCTTCTAACAGAGCAGGCTCCTGGGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR TCA 90 bp | CAGCCTTGTCCGTCACCAGCTTGCTCACTTTACTCTCTACTGCTGTaGGGGTGTCCCCAGGAGCCTGCTCTGTTAGAAGCCCGGCTCTCC | + |
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Preference number: 1 (lower is better) Translates to: QPCPSPACSLYSLLL*GCPQEPALLEARLS Trigger: GGAGAGCCGGGCTTCTAACAGAGCAGGCTCCTGGGGACACCCTCACAGCAGTAGAGAGTAAAGTGAGCAAGCTGGTGACGGACAAGGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR GCA 90 bp | TGGAGACTCAGAAGGCGGTGCTCCTGCTTCAGTCCCTTGAGCTCTTaGGACACGAAGTTCTTCATCTGCTTTATGTCCATGCCTCTCCGG | + |
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Preference number: 1 (lower is better) Translates to: WRLRRRCSCFSPLSS*DTKFFICFMSMPLR Trigger: CCGGAGAGGCATGGACATAAAGCAGATGAAGAACTTCGTGTCGCAAGAGCTCAAGGGACTGAAGCAGGAGCACCGCCTTCTGAGTCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR GCA 90 bp | TCCTGCTTCAGTCCCTTGAGCTCTTGCGACACGAAGTTCTTCATCTaGTTTATGTCCATGCCTCTCCGGCGGTCATATTGGGCCTGCAAG | + |
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Preference number: 1 (lower is better) Translates to: SCFSPLSSCDTKFFI*FMSMPLRRSYWACK Trigger: CTTGCAGGCCCAATATGACCGCCGGAGAGGCATGGACATAAAGCAGATGAAGAACTTCGTGTCGCAAGAGCTCAAGGGACTGAAGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR TCA 90 bp | CCCCAATATGGAGACTCAGAAGGCGGTGCTCCTGCTTCAGTCCCTTaGGCTCTTGCGACACGAAGTTCTTCATCTGCTTTATGTCCATGC | + |
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Preference number: 1 (lower is better) Translates to: PQYGDSEGGAPASVP*ALATRSSSSALCPC Trigger: GCATGGACATAAAGCAGATGAAGAACTTCGTGTCGCAAGAGCTCAAGGGACTGAAGCAGGAGCACCGCCTTCTGAGTCTCCATATTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR GCA 90 bp | AAGTTCCGGGCCTTCTGGCTCAAGAAGCCAAAGACATTGGAGAAGTaGTCATTGCGGATCTCACTGAACACCTTGTCCTCAGCGTTGAGT | + |
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Preference number: 1 (lower is better) Translates to: KFRAFWLKKPKTLEK*SLRISLNTLSSALS Trigger: ACTCAACGCTGAGGACAAGGTGTTCAGTGAGATCCGCAATGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR GCA 90 bp | ATTGATTCACAAGCCCCAATATGGAGACTCAGAAGGCGGTGCTCCTaGTTCAGTCCCTTGAGCTCTTGCGACACGAAGTTCTTCATCTGC | + |
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Preference number: 1 (lower is better) Translates to: IDSQAPIWRLRRRCS*FSPLSSCDTKFFIC Trigger: GCAGATGAAGAACTTCGTGTCGCAAGAGCTCAAGGGACTGAAGCAGGAGCACCGCCTTCTGAGTCTCCATATTGGGGCTTGTGAATCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR GCA 90 bp | TTCATGATTGATTCACAAGCCCCAATATGGAGACTCAGAAGGCGGTaGTCCTGCTTCAGTCCCTTGAGCTCTTGCGACACGAAGTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: FMIDSQAPIWRLRRR*SCFSPLSSCDTKFF Trigger: GAAGAACTTCGTGTCGCAAGAGCTCAAGGGACTGAAGCAGGAGCACCGCCTTCTGAGTCTCCATATTGGGGCTTGTGAATCAATCATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR GCA 90 bp | CCCTCCAGCAGCGCATGCTCGGTCTTGATTAGCTCCTGGAAGTCCTaGTTGGTTTTCTTCTTCATGATTGATTCACAAGCCCCAATATGG | + |
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Preference number: 1 (lower is better) Translates to: PSSSACSVLISSWKS*LVFFFMIDSQAPIW Trigger: CCATATTGGGGCTTGTGAATCAATCATGAAGAAGAAAACCAAGCAGGACTTCCAGGAGCTAATCAAGACCGAGCATGCGCTGCTGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR CCA 90 bp | GATCCAACGCTGATCACCTTCCAGGAAGTAATCCCTGAAAAATTCTaGCAGTTCCATGCTCAGCAGATCGACATCAAGAGGCAGCAGAGA | + |
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Preference number: 1 (lower is better) Translates to: DPTLITFQEVIPEKF*QFHAQQIDIKRQQR Trigger: TCTCTGCTGCCTCTTGATGTCGATCTGCTGAGCATGGAACTGCCAGAATTTTTCAGGGATTACTTCCTGGAAGGTGATCAGCGTTGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR CCA 90 bp | ATGTTGAAGCCCTCCAGCAGCGCATGCTCGGTCTTGATTAGCTCCTaGAAGTCCTGCTTGGTTTTCTTCTTCATGATTGATTCACAAGCC | + |
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Preference number: 1 (lower is better) Translates to: MLKPSSSACSVLISS*KSCLVFFFMIDSQA Trigger: GGCTTGTGAATCAATCATGAAGAAGAAAACCAAGCAGGACTTCCAGGAGCTAATCAAGACCGAGCATGCGCTGCTGGAGGGCTTCAACAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR CCA 90 bp | CACCAGCATCTCACTGGGATCCACAATCAGGAAATACTTCAGCACTaGCCAGGAAAACATCAGGATTTCACCTCACTCATGGCTTCCATG | + |
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Preference number: 1 (lower is better) Translates to: HQHLTGIHNQEILQH*PGKHQDFTSLMASM Trigger: CATGGAAGCCATGAGTGAGGTGAAATCCTGATGTTTTCCTGGCCAGTGCTGAAGTATTTCCTGATTGTGGATCCCAGTGAGATGCTGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR GCA 90 bp | CCGTACCACTTCATCAAGGCCCTGCCAACTCCGCCGGTCCAGCACCTGCTCAATGTGTCCCCAGGAGCCTaGTCTGTTAGAAGCCCGGCT | + |
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Preference number: 2 (lower is better) Translates to: PYHFIKALPTPPVQHLLNVSPGA*SVRSPA Trigger: AGCCGGGCTTCTAACAGAGCAGGCTCCTGGGGACAC...ATTGAGCAGGTGCTGGACCGGCGGAGTTGGCAGGGCCTTGATGAAGTGGTACGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCTTGGCCAGAGAACTGAAGGCGTCAGTGATTTTCCCTGCAGCCTTGTCCCTCCGGCGGTCATATTaGGCCTGCAAGTTCCGGGCC | + |
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Preference number: 2 (lower is better) Translates to: LLLARELKASVIFPAALSLRRSY*ACKFRA Trigger: GGCCCGGAACTTGCAGGCCCAATATGACCGCCGGAG...GGACAAGGCTGCAGGGAAAATCACTGACGCCTTCAGTTCTCTGGCCAAGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR TCA 90 bp | ATGTCCATGCCTCTCCGGCGGTCATATTGGGCCTGCAAGTTCCGGGCCTTCTGGAGAAGGTGTAAGGCCTaGGCCACAGTGTTGATCCAA | + |
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Preference number: 2 (lower is better) Translates to: MSMPLRRSYWACKFRAFWRRCKA*ATVLIQ Trigger: TTGGATCAACACTGTGGCTCAGGCCTTACACCTTCT...CCAGAAGGCCCGGAACTTGCAGGCCCAATATGACCGCCGGAGAGGCATGGACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCTTGGCCAGAGAACTGAAGGCGTCAGTGATTTTCCCTGCAGCCTTGTCCCGGTCATATTGGGCCTaGAAGTTCCGGGCCTTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LLLARELKASVIFPAALSRSYWA*KFRAFW Trigger: CCAGAAGGCCCGGAACTTGCAGGCCCAATATGACCG...GGACAAGGCTGCAGGGAAAATCACTGACGCCTTCAGTTCTCTGGCCAAGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR CCA 90 bp | CCGTACCACTTCATCAAGGCCCTGCCAACTCCGCCGGTCCAGCACCTGCTCAATAAGTTCCGGGCCTTCTaGCTCAAGAAGCCAAAGACA | + |
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Preference number: 2 (lower is better) Translates to: PYHFIKALPTPPVQHLLNKFRAF*LKKPKT Trigger: TGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTT...ATTGAGCAGGTGCTGGACCGGCGGAGTTGGCAGGGCCTTGATGAAGTGGTACGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAGGAAAACATCAGGATTTCACCTCACTCATGGCTTCCATGAGGCGAGCACTGTGTCCCCAGGAGCCTaGTCTGTTAGAAGCCCGGCT | + |
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Preference number: 2 (lower is better) Translates to: ARKTSGFHLTHGFHEASTVSPGA*SVRSPA Trigger: AGCCGGGCTTCTAACAGAGCAGGCTCCTGGGGACAC...AGTGCTCGCCTCATGGAAGCCATGAGTGAGGTGAAATCCTGATGTTTTCCTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCTTGGCCAGAGAACTGAAGGCGTCAGTGATTTTCCCTGCAGCCTTGTCCTGGACAAAAGGCACATaGGGCGTAGGCTCTCTATGG | + |
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Preference number: 2 (lower is better) Translates to: LLLARELKASVIFPAALSWTKGT*GVGSLW Trigger: CCATAGAGAGCCTACGCCTCATGTGCCTTTTGTCCA...GGACAAGGCTGCAGGGAAAATCACTGACGCCTTCAGTTCTCTGGCCAAGAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCACTGGCCAGGAAAACATCAGGATTTCACCTCACTCATGGCTTCCATGAGGTACTCTCTACTGCTGTaGGGGTGTCCCCAGGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: QHWPGKHQDFTSLMASMRYSLLL*GCPQEP Trigger: AGGCTCCTGGGGACACCCTCACAGCAGTAGAGAGTA...CCTCATGGAAGCCATGAGTGAGGTGAAATCCTGATGTTTTCCTGGCCAGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR CCA 90 bp | ATGTCCATGCCTCTCCGGCGGTCATATTGGGCCTGCAAGTTCCGGGCCTTCTGGGCAAGAGGAGTATCCTaGAGGATAGGACATGAATTC | + |
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Preference number: 2 (lower is better) Translates to: MSMPLRRSYWACKFRAFWARGVS*RIGHEF Trigger: GAATTCATGTCCTATCCTCCAGGATACTCCTCTTGC...CCAGAAGGCCCGGAACTTGCAGGCCCAATATGACCGCCGGAGAGGCATGGACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR CAA 90 bp | TGGGCCTGCAAGTTCCGGGCCTTCTGGCTCAAGAAGCCAAAGACATaGGAGAAGTGCTCATTGCGGATCTCACTGAACACCTTGTCCTCA | + |
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Preference number: 2 (lower is better) Translates to: WACKFRAFWLKKPKT*EKCSLRISLNTLSS Trigger: TGAGGACAAGGTGTTCAGTGAGATCCGCAATGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTTGCAGGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR CAA 90 bp | ATGGAGACTCAGAAGGCGGTGCTCCTGCTTCAGTCCCTTGAGCTCTaGCGACACGAAGTTCTTCATCTGCTTTATGTCCATGCCTCTCCG | + |
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Preference number: 2 (lower is better) Translates to: METQKAVLLLQSLEL*RHEVLHLLYVHASP Trigger: CGGAGAGGCATGGACATAAAGCAGATGAAGAACTTCGTGTCGCAAGAGCTCAAGGGACTGAAGCAGGAGCACCGCCTTCTGAGTCTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR CAA 90 bp | GCCCCAATATGGAGACTCAGAAGGCGGTGCTCCTGCTTCAGTCCCTaGAGCTCTTGCGACACGAAGTTCTTCATCTGCTTTATGTCCATG | + |
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Preference number: 2 (lower is better) Translates to: APIWRLRRRCSCFSP*SSCDTKFFICFMSM Trigger: CATGGACATAAAGCAGATGAAGAACTTCGTGTCGCAAGAGCTCAAGGGACTGAAGCAGGAGCACCGCCTTCTGAGTCTCCATATTGGGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCTTGGCCAGAGAACTGAAGGCGTCAGTGATTTTCCCTGCAGCCTTGTCCTCTTGTCAGAGGATGTaGCTTCTGGGCCAAAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: LLLARELKASVIFPAALSSCQRM*LLGQSQ Trigger: TTGACTTTGGCCCAGAAGTCACATCCTCTGACAAGA...GGACAAGGCTGCAGGGAAAATCACTGACGCCTTCAGTTCTCTGGCCAAGAGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR CCA 90 bp | ACGTGGGATCAAATTCAGCTTTTTGCTGATGGCACGAAAATTGCTCCTCTTGGCGGCGTAGGCTCTCTATaGGCGACACCTGCCGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: TWDQIQLFADGTKIAPLGGVGSL*ATPAGL Trigger: TAGACCGGCAGGTGTCGCCCATAGAGAGCCTACGCC...GCCAAGAGGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGATCCCACGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR CCA 90 bp | AAACATCAGGATTTCACCTCACTCATGGCTTCCATGAGGCGAGCACTGTTTGTAGGCGTAGGCTCTCTATaGGCGACACCTGCCGGTCTA | + |
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Preference number: 2 (lower is better) Translates to: KHQDFTSLMASMRRALFVGVGSL*ATPAGL Trigger: TAGACCGGCAGGTGTCGCCCATAGAGAGCCTACGCC...TACAAACAGTGCTCGCCTCATGGAAGCCATGAGTGAGGTGAAATCCTGATGTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR CAA 90 bp | TCACTGAACACCTTGTCCTCAGCGTTGAGTAGCACCTTCAGGCTCTaGTCAGAGGATGTGACTTCTGGGCCAAAGTCAACACTTCCACAC | + |
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Preference number: 2 (lower is better) Translates to: SLNTLSSALSSTFRL*SEDVTSGPKSTLPH Trigger: GTGTGGAAGTGTTGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGCCTGAAGGTGCTACTCAACGCTGAGGACAAGGTGTTCAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR CAA 90 bp | ACACTTGATTCGGAAGGTGTCATCTACCAAGCCCTCGTAAACCACTaGGGAGCAAAGTGCTGTCACAAAGTCCACATCTCTGTCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: TLDSEGVIYQALVNH*GAKCCHKVHISVQE Trigger: CTCCTGGACAGAGATGTGGACTTTGTGACAGCACTTTGCTCCCAAGTGGTTTACGAGGGCTTGGTAGATGACACCTTCCGAATCAAGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR TCA 90 bp | CTGATGGCACGAAAATTGCTCCTCTTGGCCAGAGAACTGAAGGCGTCAGTGATTAGAAGGTGTAAGGCCTaGGCCACAGTGTTGATCCAA | + |
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Preference number: 2 (lower is better) Translates to: LMARKLLLLARELKASVIRRCKA*ATVLIQ Trigger: TTGGATCAACACTGTGGCTCAGGCCTTACACCTTCT...AATCACTGACGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR TCA 90 bp | AATACTTCAGCACTGGCCAGGAAAACATCAGGATTTCACCTCACTCATGGCTTCCCTTGTCCTCAGCGTTaGGTAGCACCTTCAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: NTSALARKTSGFHLTHGFPCPQR*VAPSGS Trigger: AGAGCCTGAAGGTGCTACTCAACGCTGAGGACAAGG...GAAGCCATGAGTGAGGTGAAATCCTGATGTTTTCCTGGCCAGTGCTGAAGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR GCA 90 bp | CAGCACTGGCCAGGAAAACATCAGGATTTCACCTCACTCATGGCTTCCATGAGGAGTCCCTTGAGCTCTTaGGACACGAAGTTCTTCATC | + |
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Preference number: 2 (lower is better) Translates to: QHWPGKHQDFTSLMASMRSPLSS*DTKFFI Trigger: GATGAAGAACTTCGTGTCGCAAGAGCTCAAGGGACT...CCTCATGGAAGCCATGAGTGAGGTGAAATCCTGATGTTTTCCTGGCCAGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR GCA 90 bp | GCCAGGAAAACATCAGGATTTCACCTCACTCATGGCTTCCATGAGGCGAGCACTTGTCCGTCACCAGCTTaGTCACTTTACTCTCTACTG | + |
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Preference number: 2 (lower is better) Translates to: ARKTSGFHLTHGFHEASTCPSPA*SLYSLL Trigger: CAGTAGAGAGTAAAGTGAGCAAGCTGGTGACGGACA...AGTGCTCGCCTCATGGAAGCCATGAGTGAGGTGAAATCCTGATGTTTTCCTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR CCA 90 bp | AATATGGAGACTCAGAAGGCGGTGCTCCTGCTTCAGTCCCTTGAGCTCTTGCGAGATGTGTCCAATCTCTaGTTTCCGACCTTTGGTTTC | + |
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Preference number: 2 (lower is better) Translates to: NMETQKAVLLLQSLELLRDVSNL*FPTFGF Trigger: GAAACCAAAGGTCGGAAACCAGAGATTGGACACATC...TCGCAAGAGCTCAAGGGACTGAAGCAGGAGCACCGCCTTCTGAGTCTCCATATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGGAAATACTTCAGCACTGGCCAGGAAAACATCAGGATTTCACCTCACTCATCGGCTCTCCGCAGGTTaGAGAAGGTTAGCAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: SGNTSALARKTSGFHLTHRLSAG*RRLAGA Trigger: AGCACCTGCTAACCTTCTCCAACCTGCGGAGAGCCG...ATGAGTGAGGTGAAATCCTGATGTTTTCCTGGCCAGTGCTGAAGTATTTCCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR TCA 90 bp | TCAGGAAATACTTCAGCACTGGCCAGGAAAACATCAGGATTTCACCTCACTCATCCTTGTCCTCAGCGTTaGGTAGCACCTTCAGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SGNTSALARKTSGFHLTHPCPQR*VAPSGS Trigger: AGAGCCTGAAGGTGCTACTCAACGCTGAGGACAAGG...ATGAGTGAGGTGAAATCCTGATGTTTTCCTGGCCAGTGCTGAAGTATTTCCTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR CAA 90 bp | TCCAGCAGCGCATGCTCGGTCTTGATTAGCTCCTGGAAGTCCTGCTaGGTTTTCTTCTTCATGATTGATTCACAAGCCCCAATATGGAGA | + |
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Preference number: 2 (lower is better) Translates to: SSSACSVLISSWKSC*VFFFMIDSQAPIWR Trigger: TCTCCATATTGGGGCTTGTGAATCAATCATGAAGAAGAAAACCAAGCAGGACTTCCAGGAGCTAATCAAGACCGAGCATGCGCTGCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR TCA 90 bp | CTGATGGCACGAAAATTGCTCCTCTTGGCCAGAGAACTGAAGGCGTCAGTGATTCCAGGAAGTAATCCCTaGAAAATTCTGGCAGTTCCA | + |
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Preference number: 2 (lower is better) Translates to: LMARKLLLLARELKASVIPGSNP*KILAVP Trigger: TGGAACTGCCAGAATTTTTCAGGGATTACTTCCTGG...AATCACTGACGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR TCA 90 bp | ATAATCCTTGGGTATCAAACCATTCTCAGTGATGGACAAAAGGCACATGAGGCGGCCCATAGAGAGTACTaGGAAGGTGTAAGGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: IILGYQTILSDGQKAHEAAHREY*EGVRPE Trigger: CTCAGGCCTTACACCTTCTCAGTACTCTCTATGGGC...CGCCTCATGTGCCTTTTGTCCATCACTGAGAATGGTTTGATACCCAAGGATTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR TCA 90 bp | GAAATACTTCAGCACTGGCCAGGAAAACATCAGGATTTCACCTCACTCATGGCTCCTCCACAGGTCATATaGCATCTTTGCACATCTGCC | + |
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Preference number: 2 (lower is better) Translates to: EILQHWPGKHQDFTSLMAPPQVI*HLCTSA Trigger: GGCAGATGTGCAAAGATGTCATATGACCTGTGGAGG...AGCCATGAGTGAGGTGAAATCCTGATGTTTTCCTGGCCAGTGCTGAAGTATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR GCA 90 bp | AGCACCTTCAGGCTCTTGTCAGAGGATGTGACTTCTGGGCCAAAGTCAACACTTATTCTGGCAGTTCCATaGTCAGCAGATCGACATCAA | + |
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Preference number: 2 (lower is better) Translates to: STFRLLSEDVTSGPKSTLILAVP*SADRHQ Trigger: TTGATGTCGATCTGCTGAGCATGGAACTGCCAGAAT...AAGTGTTGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGCCTGAAGGTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTCTTGTCAGAGGATGTGACTTCTGGGCCAAAGTCAACACTTCCACACTTATTCTGGCAGTTCCATaGTCAGCAGATCGACATCAA | + |
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Preference number: 2 (lower is better) Translates to: QALVRGCDFWAKVNTSTLILAVP*SADRHQ Trigger: TTGATGTCGATCTGCTGAGCATGGAACTGCCAGAAT...AAGTGTGGAAGTGTTGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGCCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTTCCATGAGGCGAGCACTGTTTGTAACAGCAGTTGTCAGAAAAATAAATCTAGAAGGCGGTGCTCCTaGTTCAGTCCCTTGAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GFHEASTVCNSSCQKNKSRRRCS*FSPLSS Trigger: AGAGCTCAAGGGACTGAAGCAGGAGCACCGCCTTCT...AGATTTATTTTTCTGACAACTGCTGTTACAAACAGTGCTCGCCTCATGGAAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| 3UTR-3UTR TCA 90 bp | TCTGGGCCAAAGTCAACACTTCCACACTTGATTCGGAAGGTGTCATCTACCAAGCTGGAGGATAGGACATaGATTCTCTCCCCCAAAATT | + |
|
Preference number: 2 (lower is better) Translates to: SGPKSTLPHLIRKVSSTKLEDRT*ILSPKI Trigger: AATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAG...CTTGGTAGATGACACCTTCCGAATCAAGTGTGGAAGTGTTGACTTTGGCCCAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAGTCCACATCTCTGTCCAGGAGAAAGATGTGTCCAATCTCTGGTTTCCGACCCCAGGAAGTAATCCCTaGAAAATTCTGGCAGTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: KVHISVQEKDVSNLWFPTPGSNP*KILAVP Trigger: TGGAACTGCCAGAATTTTTCAGGGATTACTTCCTGG...GGTCGGAAACCAGAGATTGGACACATCTTTCTCCTGGACAGAGATGTGGACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTCATGATTGATTCACAAGCCCCAATATGGAGACTCAGAAGGCGGTGCTCCATCCCTGAAAAATTCTaGCAGTTCCATGCTCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: FFMIDSQAPIWRLRRRCSIPEKF*QFHAQQ Trigger: CTGCTGAGCATGGAACTGCCAGAATTTTTCAGGGAT...GGAGCACCGCCTTCTGAGTCTCCATATTGGGGCTTGTGAATCAATCATGAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR CCA 90 bp | AATACTTCAGCACTGGCCAGGAAAACATCAGGATTTCACCTCACTCATGGCTTCCTGGTTTCCGACCTTTaGTTTCACTGTCTTCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: NTSALARKTSGFHLTHGFLVSDL*FHCLLP Trigger: AGGAAGAAGACAGTGAAACCAAAGGTCGGAAACCAG...GAAGCCATGAGTGAGGTGAAATCCTGATGTTTTCCTGGCCAGTGCTGAAGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCTTCCATGAGGCGAGCACTGTTTGTAACAGCAGTTGTCAGAAAAATAAATCTGGGACCGATAATCCTTaGGTATCAAACCATTCTCAG | + |
|
Preference number: 2 (lower is better) Translates to: GFHEASTVCNSSCQKNKSGTDNP*VSNHSQ Trigger: CTGAGAATGGTTTGATACCCAAGGATTATCGGTCCC...AGATTTATTTTTCTGACAACTGCTGTTACAAACAGTGCTCGCCTCATGGAAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAACATCAGGATTTCACCTCACTCATGGCTTCCATGAGGCGAGCACTGTTTGTTTTCTTCTTCATGATTaGTTCACAAGCCCCAATATG | + |
|
Preference number: 2 (lower is better) Translates to: KTSGFHLTHGFHEASTVCFLLHD*FTSPNM Trigger: CATATTGGGGCTTGTGAATCAATCATGAAGAAGAAA...ACAAACAGTGCTCGCCTCATGGAAGCCATGAGTGAGGTGAAATCCTGATGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR GCA 90 bp | GGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAAGCACCATCTCACATaGATAAAACTTCTGAGGGCT | + |
|
Preference number: 2 (lower is better) Translates to: GHEFSPPKLVPKFPALSIKHHLT*IKLLRA Trigger: AGCCCTCAGAAGTTTTATGCATGTGAGATGGTGCTT...AATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000135053.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGTTTTCTTCTTCATGATTGATTCACAAGCCCCAATATGGAGACTCAGAAGGATCCCTGAAAAATTCTaGCAGTTCCATGCTCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: LVFFFMIDSQAPIWRLRRIPEKF*QFHAQQ Trigger: CTGCTGAGCATGGAACTGCCAGAATTTTTCAGGGAT...CCTTCTGAGTCTCCATATTGGGGCTTGTGAATCAATCATGAAGAAGAAAACCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR CCA 72 bp | GAGCCTGCTCTGTTAGAAGCCCGGCTCTCCGCAGGTTaGAGAAGGTTAGCAGGTGCTCGGGGCCATAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: EPALLEARLSAG*RRLAGARGHSS Trigger: AGAGCTATGGCCCCGAGCACCTGCTAACCTTCTCCAACCTGCGGAGAGCCGGGCTTCTAACAGAGCAGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR GCA 72 bp | TTTATGTCCATGCCTCTCCGGCGGTCATATTGGGCCTaGAAGTTCCGGGCCTTCTGGCTCAAGAAGCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: FMSMPLRRSYWA*KFRAFWLKKPK Trigger: CTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTTGCAGGCCCAATATGACCGCCGGAGAGGCATGGACATAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR GCA 72 bp | CAAGCCCCAATATGGAGACTCAGAAGGCGGTGCTCCTaGTTCAGTCCCTTGAGCTCTTGCGACACGAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: QAPIWRLRRRCS*FSPLSSCDTKF Trigger: GAACTTCGTGTCGCAAGAGCTCAAGGGACTGAAGCAGGAGCACCGCCTTCTGAGTCTCCATATTGGGGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR GCA 72 bp | GATTCACAAGCCCCAATATGGAGACTCAGAAGGCGGTaGTCCTGCTTCAGTCCCTTGAGCTCTTGCGACACG | + |
|
Preference number: 3 (lower is better) Translates to: DSQAPIWRLRRR*SCFSPLSSCDT Trigger: CGTGTCGCAAGAGCTCAAGGGACTGAAGCAGGAGCACCGCCTTCTGAGTCTCCATATTGGGGCTTGTGAATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR TCA 72 bp | GGAGACTCAGAAGGCGGTGCTCCTGCTTCAGTCCCTTaGGCTCTTGCGACACGAAGTTCTTCATCTGCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: GDSEGGAPASVP*ALATRSSSSAL Trigger: TAAAGCAGATGAAGAACTTCGTGTCGCAAGAGCTCAAGGGACTGAAGCAGGAGCACCGCCTTCTGAGTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR GCA 72 bp | CTTGCGACACGAAGTTCTTCATCTGCTTTATGTCCATaGCTCTCCGGCGGTCATATTGGGCCTGCAAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: LATRSSSSALCP*LSGGHIGPASS Trigger: GGAACTTGCAGGCCCAATATGACCGCCGGAGAGGCATGGACATAAAGCAGATGAAGAACTTCGTGTCGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGCCTTGTCCGTCACCAGCTTGCTCACTTTACTCTCTACTGCTGTGAGGGTGTCTGGTTTCCGACCTTaGGTTTCACTGTCTTCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: AALSVTSLLTLLSTAVRVSGFRP*VSLSSS Trigger: GGAAGAAGACAGTGAAACCAAAGGTCGGAAACCAGA...CACCCTCACAGCAGTAGAGAGTAAAGTGAGCAAGCTGGTGACGGACAAGGCTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGAAATACTTCAGCACTGGCCAGGAAAACATCAGGATTTCACCTCACTCATTCTCCGGCGGTCATATaGGGCCTGCAAGTTCCGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SGNTSALARKTSGFHLTHSPAVI*GLQVPG Trigger: GCCCGGAACTTGCAGGCCCAATATGACCGCCGGAGA...ATGAGTGAGGTGAAATCCTGATGTTTTCCTGGCCAGTGCTGAAGTATTTCCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCACTGGCCAGGAAAACATCAGGATTTCACCTCACTCATGGCTTCCATGAGGCTGATGGCACGAAAATaGCTCCTCTTGGCCAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QHWPGKHQDFTSLMASMRLMARK*LLLARE Trigger: TTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAG...CCTCATGGAAGCCATGAGTGAGGTGAAATCCTGATGTTTTCCTGGCCAGTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR GCA 72 bp | AGAAGGCGGTGCTCCTGCTTCAGTCCCTTGAGCTCTTaGGACACGAAGTTCTTCATCTGCTTTATGTCCATG | + |
|
Preference number: 3 (lower is better) Translates to: RRRCSCFSPLSS*DTKFFICFMSM Trigger: CATGGACATAAAGCAGATGAAGAACTTCGTGTCGCAAGAGCTCAAGGGACTGAAGCAGGAGCACCGCCTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCACTGGCCAGGAAAACATCAGGATTTCACCTCACTCATGGCTTCCATGAGGAAGAAGCCAAAGACATaGGAGAAGTGCTCATTGCGG | + |
|
Preference number: 3 (lower is better) Translates to: QHWPGKHQDFTSLMASMRKKPKT*EKCSLR Trigger: CCGCAATGAGCACTTCTCCAATGTCTTTGGCTTCTT...CCTCATGGAAGCCATGAGTGAGGTGAAATCCTGATGTTTTCCTGGCCAGTGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR GCA 72 bp | GCCTTCTGGCTCAAGAAGCCAAAGACATTGGAGAAGTaGTCATTGCGGATCTCACTGAACACCTTGTCCTCA | + |
|
Preference number: 3 (lower is better) Translates to: AFWLKKPKTLEK*SLRISLNTLSS Trigger: TGAGGACAAGGTGTTCAGTGAGATCCGCAATGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCAGAAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR CAA 90 bp | GCATGCTCGGTCTTGATTAGCTCCTGGAAGTCCTGCTTGGTTTTCTTCTTCATGTTGGAGAAGTGCTCATaGCGGATCTCACTGAACACC | + |
|
Preference number: 3 (lower is better) Translates to: ACSVLISSWKSCLVFFFMLEKCS*RISLNT Trigger: GGTGTTCAGTGAGATCCGCAATGAGCACTTCTCCAA...CATGAAGAAGAAAACCAAGCAGGACTTCCAGGAGCTAATCAAGACCGAGCATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACTCATGGCTTCCATGAGGCGAGCACTGTTTGTAACAGCAGTTGTCAGAAAACGAAAATTGCTCCTCTaGGCCAGAGAACTGAAGGCG | + |
|
Preference number: 3 (lower is better) Translates to: SLMASMRRALFVTAVVRKRKLLL*ARELKA Trigger: CGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCG...TTTTCTGACAACTGCTGTTACAAACAGTGCTCGCCTCATGGAAGCCATGAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGTGGGATCAAATTCAGCTTTTTGCTGATGGCACGAAAATTGCTCCTCTTGGCAGCACCTTCAGGCTCTaGTCAGAGGATGTGACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TWDQIQLFADGTKIAPLGSTFRL*SEDVTS Trigger: AGAAGTCACATCCTCTGACAAGAGCCTGAAGGTGCT...GCCAAGAGGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGATCCCACGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR CAA 90 bp | AATACTTCAGCACTGGCCAGGAAAACATCAGGATTTCACCTCACTCATGGCTTCTTGGAGAAGTGCTCATaGCGGATCTCACTGAACACC | + |
|
Preference number: 3 (lower is better) Translates to: NTSALARKTSGFHLTHGFLEKCS*RISLNT Trigger: GGTGTTCAGTGAGATCCGCAATGAGCACTTCTCCAA...GAAGCCATGAGTGAGGTGAAATCCTGATGTTTTCCTGGCCAGTGCTGAAGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTTCCATGAGGCGAGCACTGTTTGTAACAGCAGTTGTCAGAAAAATAAATCTATTTTCCCTGCAGCCTaGTCCGTCACCAGCTTGCTC | + |
|
Preference number: 3 (lower is better) Translates to: GFHEASTVCNSSCQKNKSIFPAA*SVTSLL Trigger: GAGCAAGCTGGTGACGGACAAGGCTGCAGGGAAAAT...AGATTTATTTTTCTGACAACTGCTGTTACAAACAGTGCTCGCCTCATGGAAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR CAA 90 bp | TCACTCATGGCTTCCATGAGGCGAGCACTGTTTGTAACAGCAGTTGTCAGAAAACTGATGGCACGAAAATaGCTCCTCTTGGCCAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SLMASMRRALFVTAVVRKLMARK*LLLARE Trigger: TTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAG...TTTTCTGACAACTGCTGTTACAAACAGTGCTCGCCTCATGGAAGCCATGAGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGTGGGATCAAATTCAGCTTTTTGCTGATGGCACGAAAATTGCTCCTCTTGGCTTGTCCGTCACCAGCTaGCTCACTTTACTCTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: TWDQIQLFADGTKIAPLGLSVTS*LTLLST Trigger: AGTAGAGAGTAAAGTGAGCAAGCTGGTGACGGACAA...GCCAAGAGGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGATCCCACGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR GCA 72 bp | AGCGCATGCTCGGTCTTGATTAGCTCCTGGAAGTCCTaGTTGGTTTTCTTCTTCATGATTGATTCACAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: SACSVLISSWKS*LVFFFMIDSQA Trigger: GGCTTGTGAATCAATCATGAAGAAGAAAACCAAGCAGGACTTCCAGGAGCTAATCAAGACCGAGCATGCGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR CCA 72 bp | CTGATCACCTTCCAGGAAGTAATCCCTGAAAAATTCTaGCAGTTCCATGCTCAGCAGATCGACATCAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LITFQEVIPEKF*QFHAQQIDIKR Trigger: CCTCTTGATGTCGATCTGCTGAGCATGGAACTGCCAGAATTTTTCAGGGATTACTTCCTGGAAGGTGATCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR CCA 72 bp | CTCACTGGGATCCACAATCAGGAAATACTTCAGCACTaGCCAGGAAAACATCAGGATTTCACCTCACTCATG | + |
|
Preference number: 3 (lower is better) Translates to: LTGIHNQEILQH*PGKHQDFTSLM Trigger: CATGAGTGAGGTGAAATCCTGATGTTTTCCTGGCCAGTGCTGAAGTATTTCCTGATTGTGGATCCCAGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTTTTCTTCTTCATGATTGATTCACAAGCCCCAATATGGAGACTCAGAAGGAGCACCTTCAGGCTCTaGTCAGAGGATGTGACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LVFFFMIDSQAPIWRLRRSTFRL*SEDVTS Trigger: AGAAGTCACATCCTCTGACAAGAGCCTGAAGGTGCT...CCTTCTGAGTCTCCATATTGGGGCTTGTGAATCAATCATGAAGAAGAAAACCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGGAAATACTTCAGCACTGGCCAGGAAAACATCAGGATTTCACCTCACTCATTCCTGGAAGTCCTGCTaGGTTTTCTTCTTCATGATT | + |
|
Preference number: 3 (lower is better) Translates to: SGNTSALARKTSGFHLTHSWKSC*VFFFMI Trigger: AATCATGAAGAAGAAAACCAAGCAGGACTTCCAGGA...ATGAGTGAGGTGAAATCCTGATGTTTTCCTGGCCAGTGCTGAAGTATTTCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR TCA 72 bp | TTTATAAGCAAGAGGAGTATCCTGGAGGATAGGACATaGATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCC | + |
|
Preference number: 3 (lower is better) Translates to: FISKRSILEDRT*ILSPKISSKVP Trigger: GGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATACTCCTCTTGCTTATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032749.12 ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| CDS-3UTR GCA 90 bp | ACTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCAGTTTCTGAGTCCAAGGCCCGCCGGTCCAGCACCTaGTCAATGATTCGGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TLIPALRRQRQAVSESKARRSST*SMIRQL Trigger: GAGCTGCCGAATCATTGAGCAGGTGCTGGACCGGCG...GGCCTTGGACTCAGAAACTGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000205864.2 |
||
| CDS-3UTR TCA 90 bp | ATATGGAGACTCAGAAGGCGGTGCTCCTGCTTCAGTCCCTTGAGCTCTTGCGACGTTCTAGCAGATAGATaGGCTGGTCCCGAGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IWRLRRRCSCFSPLSSCDVLADR*AGPEPA Trigger: GGCTGGCTCGGGACCAGCTCATCTATCTGCTAGAAC...GTCGCAAGAGCTCAAGGGACTGAAGCAGGAGCACCGCCTTCTGAGTCTCCATAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| CDS-3UTR TCA 90 bp | ACTTTAATCCCAGCACTCAGGAGGCAGAGGCAGGCAGTTTCTGAGTCCAAGGCCCCAGCACCTGCTCAATaGTTCGGCAGCTCAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TLIPALRRQRQAVSESKAPAPAQ*FGSSEA Trigger: TGCCTCTGAGCTGCCGAATCATTGAGCAGGTGCTGG...GGCCTTGGACTCAGAAACTGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000205864.2 |
||
| 3UTR CAA 72 bp | CGGATGTTGAAGCCCTCCAGCAGCGCATGCTCGGTCTaGATTAGCTCCTGGAAGTCCTGCTTGGTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RMLKPSSSACSV*ISSWKSCLVFF Trigger: GAAGAAAACCAAGCAGGACTTCCAGGAGCTAATCAAGACCGAGCATGCGCTGCTGGAGGGCTTCAACATCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR CAA 72 bp | TGGAGACTCAGAAGGCGGTGCTCCTGCTTCAGTCCCTaGAGCTCTTGCGACACGAAGTTCTTCATCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: WRLRRRCSCFSP*SSCDTKFFICF Trigger: AAAGCAGATGAAGAACTTCGTGTCGCAAGAGCTCAAGGGACTGAAGCAGGAGCACCGCCTTCTGAGTCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGTCACAAAGTCCACATCTCTGTCCAGGAGAAAGATGTGTCCAATCTCTGTTCTAGCAGATAGATaGGCTGGTCCCGAGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAVTKSTSLSRRKMCPISVLADR*AGPEPA Trigger: GGCTGGCTCGGGACCAGCTCATCTATCTGCTAGAAC...AGAGATTGGACACATCTTTCTCCTGGACAGAGATGTGGACTTTGTGACAGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAAGTGTAGCTGGGTGTCCCCAGGAGCCTaGTCTGTTAGAAGCCCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPPKLVPKFPALSIKCSWVSPGA*SVRSPA Trigger: AGCCGGGCTTCTAACAGAGCAGGCTCCTGGGGACAC...CCAGCTACACTTAATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR CCA 90 bp | GGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTCTCCGGCGGTCATATTaGGCCTGCAAGTTCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GHEFSPPKLVPKFPALSILRRSY*ACKFRA Trigger: GGCCCGGAACTTGCAGGCCCAATATGACCGCCGGAG...AATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| 3UTR CAA 72 bp | ACCTTGTCCTCAGCGTTGAGTAGCACCTTCAGGCTCTaGTCAGAGGATGTGACTTCTGGGCCAAAGTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TLSSALSSTFRL*SEDVTSGPKST Trigger: TGTTGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGCCTGAAGGTGCTACTCAACGCTGAGGACAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR CAA 72 bp | TCATTGCGGATCTCACTGAACACCTTGTCCTCAGCGTaGAGTAGCACCTTCAGGCTCTTGTCAGAGGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SLRISLNTLSSA*SSTFRLLSEDV Trigger: CACATCCTCTGACAAGAGCCTGAAGGTGCTACTCAACGCTGAGGACAAGGTGTTCAGTGAGATCCGCAATGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR CAA 72 bp | CAGAAGGCGGTGCTCCTGCTTCAGTCCCTTGAGCTCTaGCGACACGAAGTTCTTCATCTGCTTTATGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QKAVLLLQSLEL*RHEVLHLLYVH Trigger: ATGGACATAAAGCAGATGAAGAACTTCGTGTCGCAAGAGCTCAAGGGACTGAAGCAGGAGCACCGCCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| CDS-3UTR TCA 90 bp | AGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGGTTCTAGCAGATAGATaGGCTGGTCCCGAGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RIGHEFSPPKLVPKFPALVLADR*AGPEPA Trigger: GGCTGGCTCGGGACCAGCTCATCTATCTGCTAGAAC...CAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032749.12 ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| CDS-3UTR GCA 90 bp | CTCCTCTTGGCCAGAGAACTGAAGGCGTCAGTGATTTTCCCTGCAGCCTTGTCCAAGCACCATCTCACATaGATAAAACTTCTGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLARELKASVIFPAALSKHHLT*IKLLRA Trigger: AGCCCTCAGAAGTTTTATGCATGTGAGATGGTGCTT...GGACAAGGCTGCAGGGAAAATCACTGACGCCTTCAGTTCTCTGGCCAAGAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150585.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAAGTGTAGCTGGCGGTCATATTGGGCCTaGAAGTTCCGGGCCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPPKLVPKFPALSIKCSWRSYWA*KFRAFW Trigger: CCAGAAGGCCCGGAACTTGCAGGCCCAATATGACCG...CCAGCTACACTTAATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR GCA 90 bp | GGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTCGCCGGTCCAGCACCTaGTCAATGATTCGGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHEFSPPKLVPKFPALSIRRSST*SMIRQL Trigger: GAGCTGCCGAATCATTGAGCAGGTGCTGGACCGGCG...AATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR CCA 90 bp | GTATCCTGGAGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCGGCGTAGGCTCTCTATaGGCGACACCTGCCGGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VSWRIGHEFSPPKLVPKFGVGSL*ATPAGL Trigger: TAGACCGGCAGGTGTCGCCCATAGAGAGCCTACGCC...GAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR CCA 90 bp | TCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAAGTGTAGCTGGCGGCTCTCCGCAGGTTaGAGAAGGTTAGCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPPKLVPKFPALSIKCSWRLSAG*RRLAGA Trigger: AGCACCTGCTAACCTTCTCCAACCTGCGGAGAGCCG...CCAGCTACACTTAATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| 3UTR CAA 72 bp | TCGGAAGGTGTCATCTACCAAGCCCTCGTAAACCACTaGGGAGCAAAGTGCTGTCACAAAGTCCACATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SEGVIYQALVNH*GAKCCHKVHIS Trigger: AGAGATGTGGACTTTGTGACAGCACTTTGCTCCCAAGTGGTTTACGAGGGCTTGGTAGATGACACCTTCCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| 3UTR CAA 72 bp | TGGCTCAAGAAGCCAAAGACATTGGAGAAGTGCTCATaGCGGATCTCACTGAACACCTTGTCCTCAGCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: WLKKPKTLEKCS*RISLNTLSSAL Trigger: CAACGCTGAGGACAAGGTGTTCAGTGAGATCCGCAATGAGCACTTCTCCAATGTCTTTGGCTTCTTGAGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| CDS-3UTR TCA 90 bp | AGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGCCTTGTCCTCAGCGTTaGGTAGCACCTTCAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RIGHEFSPPKLVPKFPALPCPQR*VAPSGS Trigger: AGAGCCTGAAGGTGCTACTCAACGCTGAGGACAAGG...CAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR TCA 90 bp | GTATCCTGGAGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCTACTCTCTACTGCTGTaGGGGTGTCCCCAGGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VSWRIGHEFSPPKLVPKFYSLLL*GCPQEP Trigger: AGGCTCCTGGGGACACCCTCACAGCAGTAGAGAGTA...GAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR TCA 90 bp | GTATCCTGGAGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCACCTGCTCAATaGTTCGGCAGCTCAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSWRIGHEFSPPKLVPKFPAPAQ*FGSSEA Trigger: TGCCTCTGAGCTGCCGAATCATTGAGCAGGTGCTGG...GAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| 3UTR CAA 72 bp | GGGATCAAATTCAGCTTTTTGCTGATGGCACGAAAATaGCTCCTCTTGGCCAGAGAACTGAAGGCGTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GIKFSFLLMARK*LLLARELKASV Trigger: CACTGACGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGATCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGTCACAAAGTCCACATCTCTGTCCAGGAGAAAGATGTGTCCAATCTCTCCAGCTTGTCAGCATTaGCAAGACTGGCAATGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAVTKSTSLSRRKMCPISPACQH*QDWQCS Trigger: GCTACATTGCCAGTCTTGTCAATGCTGACAAGCTGG...AGAGATTGGACACATCTTTCTCCTGGACAGAGATGTGGACTTTGTGACAGCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150585.8 |
||
| CDS-3UTR TCA 90 bp | AGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGGCCCATAGAGAGTACTaGGAAGGTGTAAGGCCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RIGHEFSPPKLVPKFPALAHREY*EGVRPE Trigger: CTCAGGCCTTACACCTTCTCAGTACTCTCTATGGGC...CAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR TCA 90 bp | GGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTGCGCATGCTCGGTCTTaGTTAGCTCCTGGAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GHEFSPPKLVPKFPALSIAHARS*LAPGSP Trigger: AGGACTTCCAGGAGCTAATCAAGACCGAGCATGCGC...AATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR GCA 90 bp | GCCAGGAAAACATCAGGATTTCACCTCACTCATGGCTTCCATGAGGCGAGCACTAGGGCTCATGAGATCTaGCTCAATGAACAAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: ARKTSGFHLTHGFHEASTRAHEI*LNEQIL Trigger: AAGGATTTGTTCATTGAGGCAGATCTCATGAGCCCT...AGTGCTCGCCTCATGGAAGCCATGAGTGAGGTGAAATCCTGATGTTTTCCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| CDS-3UTR GCA 90 bp | GTATCCTGGAGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCAGAAGGCGGTGCTCCTaGTTCAGTCCCTTGAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSWRIGHEFSPPKLVPKFRRRCS*FSPLSS Trigger: AGAGCTCAAGGGACTGAAGCAGGAGCACCGCCTTCT...GAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR GCA 90 bp | GTATCCTGGAGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCAGACTCAGAAGGCGGTaGTCCTGCTTCAGTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSWRIGHEFSPPKLVPKFRLRRR*SCFSPL Trigger: CAAGGGACTGAAGCAGGAGCACCGCCTTCTGAGTCT...GAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR TCA 90 bp | AGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGCCTCCACAGGTCATATaGCATCTTTGCACATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RIGHEFSPPKLVPKFPALPPQVI*HLCTSA Trigger: GGCAGATGTGCAAAGATGTCATATGACCTGTGGAGG...CAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR TCA 90 bp | GGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTTGGACAAAAGGCACATaGGGCGTAGGCTCTCTATGG | + |
|
Preference number: 4 (lower is better) Translates to: GHEFSPPKLVPKFPALSIWTKGT*GVGSLW Trigger: CCATAGAGAGCCTACGCCTCATGTGCCTTTTGTCCA...AATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR GCA 90 bp | GTATCCTGGAGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCACTTTACTCTCTACTaGTGTGAGGGTGTCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VSWRIGHEFSPPKLVPKFHFTLY*CEGVPR Trigger: CCTGGGGACACCCTCACAGCAGTAGAGAGTAAAGTG...GAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR GCA 90 bp | GGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTGTCAGTGATTTTCCCTaGAGCCTTGTCCGTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHEFSPPKLVPKFPALSIVSDFP*SLVRHQ Trigger: CTGGTGACGGACAAGGCTGCAGGGAAAATCACTGAC...AATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR CCA 90 bp | AGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAAGTTCCGGGCCTTCTaGCTCAAGAAGCCAAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: RIGHEFSPPKLVPKFPALKFRAF*LKKPKT Trigger: TGTCTTTGGCTTCTTGAGCCAGAAGGCCCGGAACTT...CAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| 3UTR CAA 72 bp | GCATGCTCGGTCTTGATTAGCTCCTGGAAGTCCTGCTaGGTTTTCTTCTTCATGATTGATTCACAAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ACSVLISSWKSC*VFFFMIDSQAP Trigger: TGGGGCTTGTGAATCAATCATGAAGAAGAAAACCAAGCAGGACTTCCAGGAGCTAATCAAGACCGAGCATGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| CDS-3UTR TCA 90 bp | GTATCCTGGAGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTTGTCAGCATTaGCAAGACTGGCAATGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSWRIGHEFSPPKLVPKFPACQH*QDWQCS Trigger: GCTACATTGCCAGTCTTGTCAATGCTGACAAGCTGG...GAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032749.12 ENSMUST00000150585.8 |
||
| CDS-3UTR TCA 90 bp | GGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAGAAGGTGTAAGGCCTaGGCCACAGTGTTGATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: GHEFSPPKLVPKFPALSIRRCKA*ATVLIQ Trigger: TTGGATCAACACTGTGGCTCAGGCCTTACACCTTCT...AATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR TCA 90 bp | AGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGTCTTGTCAGAGGATGTaGCTTCTGGGCCAAAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RIGHEFSPPKLVPKFPALSCQRM*LLGQSQ Trigger: TTGACTTTGGCCCAGAAGTCACATCCTCTGACAAGA...CAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR GCA 90 bp | TTGTCAGAGGATGTGACTTCTGGGCCAAAGTCAACACTTCCACACTTGATTCGGAGGGCTCATGAGATCTaGCTCAATGAACAAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSEDVTSGPKSTLPHLIRRAHEI*LNEQIL Trigger: AAGGATTTGTTCATTGAGGCAGATCTCATGAGCCCT...CCGAATCAAGTGTGGAAGTGTTGACTTTGGCCCAGAAGTCACATCCTCTGACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| CDS-3UTR GCA 90 bp | CTGATGGCACGAAAATTGCTCCTCTTGGCCAGAGAACTGAAGGCGTCAGTGATTTTGTCCACTTCATGTTaGTTCAGGATAGAGACGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LMARKLLLLARELKASVILSTSC*FRIETL Trigger: TAACGTCTCTATCCTGAAGCAACATGAAGTGGACAA...AATCACTGACGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000150585.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAAGTGTAGCTGGTGTCCGTCACCAGCTTaGTCACTTTACTCTCTACTG | + |
|
Preference number: 4 (lower is better) Translates to: SPPKLVPKFPALSIKCSWCPSPA*SLYSLL Trigger: CAGTAGAGAGTAAAGTGAGCAAGCTGGTGACGGACA...CCAGCTACACTTAATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR TCA 90 bp | TCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAAGTGTAGCTGGCCAGGAAGTAATCCCTaGAAAATTCTGGCAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPPKLVPKFPALSIKCSWPGSNP*KILAVP Trigger: TGGAACTGCCAGAATTTTTCAGGGATTACTTCCTGG...CCAGCTACACTTAATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR TCA 90 bp | TCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAAGTGTAGCTGGCAACACTTCCACACTTaGTTCGGAAGGTGTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: SPPKLVPKFPALSIKCSWQHFHT*FGRCHL Trigger: TAGATGACACCTTCCGAATCAAGTGTGGAAGTGTTG...CCAGCTACACTTAATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR GCA 90 bp | AGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGATTCTGGCAGTTCCATaGTCAGCAGATCGACATCAA | + |
|
Preference number: 4 (lower is better) Translates to: RIGHEFSPPKLVPKFPALILAVP*SADRHQ Trigger: TTGATGTCGATCTGCTGAGCATGGAACTGCCAGAAT...CAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR GCA 90 bp | GGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAGTCCCTTGAGCTCTTaGGACACGAAGTTCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GHEFSPPKLVPKFPALSISPLSS*DTKFFI Trigger: GATGAAGAACTTCGTGTCGCAAGAGCTCAAGGGACT...AATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR CCA 90 bp | TCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAAGTGTAGCTGGGATGTGTCCAATCTCTaGTTTCCGACCTTTGGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPPKLVPKFPALSIKCSWDVSNL*FPTFGF Trigger: GAAACCAAAGGTCGGAAACCAGAGATTGGACACATC...CCAGCTACACTTAATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR CCA 90 bp | TCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAAGTGTAGCTGGGGGACCGATAATCCTTaGGTATCAAACCATTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPPKLVPKFPALSIKCSWGTDNP*VSNHSQ Trigger: CTGAGAATGGTTTGATACCCAAGGATTATCGGTCCC...CCAGCTACACTTAATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR GCA 90 bp | AGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGGGCTCATGAGATCTaGCTCAATGAACAAATCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RIGHEFSPPKLVPKFPALRAHEI*LNEQIL Trigger: AAGGATTTGTTCATTGAGGCAGATCTCATGAGCCCT...CAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032749.12 ENSMUST00000135053.8 ENSMUST00000150585.8 |
||
| CDS-3UTR GCA 90 bp | AGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAAGCACCATCTCACATaGATAAAACTTCTGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RIGHEFSPPKLVPKFPALKHHLT*IKLLRA Trigger: AGCCCTCAGAAGTTTTATGCATGTGAGATGGTGCTT...CAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032749.12 ENSMUST00000150585.8 |
||
| CDS-3UTR GCA 90 bp | GGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAAGACATTGGAGAAGTaGTCATTGCGGATCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: GHEFSPPKLVPKFPALSIKTLEK*SLRISL Trigger: CAGTGAGATCCGCAATGAGCACTTCTCCAATGTCTT...AATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR GCA 90 bp | GTATCCTGGAGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCAGCTCCTGGAAGTCCTaGTTGGTTTTCTTCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: VSWRIGHEFSPPKLVPKFSSWKS*LVFFFM Trigger: CATGAAGAAGAAAACCAAGCAGGACTTCCAGGAGCT...GAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR CCA 90 bp | GGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTATCCCTGAAAAATTCTaGCAGTTCCATGCTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GHEFSPPKLVPKFPALSIIPEKF*QFHAQQ Trigger: CTGCTGAGCATGGAACTGCCAGAATTTTTCAGGGAT...AATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR CCA 90 bp | GGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTCTGGTTTCCGACCTTTaGTTTCACTGTCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GHEFSPPKLVPKFPALSILVSDL*FHCLLP Trigger: AGGAAGAAGACAGTGAAACCAAAGGTCGGAAACCAG...AATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR CCA 90 bp | GGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTGTCTTGATTAGCTCCTaGAAGTCCTGCTTGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GHEFSPPKLVPKFPALSIVLISS*KSCLVF Trigger: GAAAACCAAGCAGGACTTCCAGGAGCTAATCAAGAC...AATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR TCA 90 bp | GTATCCTGGAGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCAATTCAGCTTTTTGCTaGTGGCACGAAAATTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSWRIGHEFSPPKLVPKFNSAFC*WHENCS Trigger: GGAGCAATTTTCGTGCCATCAGCAAAAAGCTGAATT...GAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR GCA 90 bp | GGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTTTGTCCACTTCATGTTaGTTCAGGATAGAGACGTTA | + |
|
Preference number: 4 (lower is better) Translates to: GHEFSPPKLVPKFPALSILSTSC*FRIETL Trigger: TAACGTCTCTATCCTGAAGCAACATGAAGTGGACAA...AATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032749.12 ENSMUST00000150585.8 |
||
| CDS-3UTR TCA 90 bp | GTATCCTGGAGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCTTTCTTCTTCATGATTaGTTCACAAGCCCCAATATG | + |
|
Preference number: 4 (lower is better) Translates to: VSWRIGHEFSPPKLVPKFFLLHD*FTSPNM Trigger: CATATTGGGGCTTGTGAATCAATCATGAAGAAGAAA...GAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
||
| CDS-3UTR CAA 90 bp | ATATGGAGACTCAGAAGGCGGTGCTCCTGCTTCAGTCCCTTGAGCTCTTGCGACGCGCTGAGGGCAGGTTaGTTCTCCACCTTGTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: IWRLRRRCSCFSPLSSCDALRAG*FSTLYS Trigger: GCTGTACAAGGTGGAGAACAAACCTGCCCTCAGCGC...GTCGCAAGAGCTCAAGGGACTGAAGCAGGAGCACCGCCTTCTGAGTCTCCATAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150585.8 |
||
| CDS-3UTR CAA 90 bp | CGGATCTCACTGAACACCTTGTCCTCAGCGTTGAGTAGCACCTTCAGGCTCTTGTCCCGAGCCAGCCTCTaGAGCATAGAGAAGTCGGGA | + |
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Preference number: 5 (lower is better) Translates to: RISLNTLSSALSSTFRLLSRASL*SIEKSG Trigger: TCCCGACTTCTCTATGCTCAAGAGGCTGGCTCGGGA...CAAGAGCCTGAAGGTGCTACTCAACGCTGAGGACAAGGTGTTCAGTGAGATCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| CDS-3UTR CAA 90 bp | GGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTTCTCCGGCGGTCATATaGGGCCTGCAAGTTCCGGGC | + |
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Preference number: 5 (lower is better) Translates to: GHEFSPPKLVPKFPALSISPAVI*GLQVPG Trigger: GCCCGGAACTTGCAGGCCCAATATGACCGCCGGAGA...AATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
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| CDS-3UTR CAA 90 bp | GTATCCTGGAGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCGGCTCTCCGCAGGTaGGAGAAGGTTAGCAGGTGC | + |
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Preference number: 5 (lower is better) Translates to: VSWRIGHEFSPPKLVPKFPALRR*EKVSRC Trigger: GCACCTGCTAACCTTCTCCAACCTGCGGAGAGCCGG...GAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
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| CDS-3UTR CAA 90 bp | AGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGTCCCGAGCCAGCCTCTaGAGCATAGAGAAGTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RIGHEFSPPKLVPKFPALSRASL*SIEKSG Trigger: TCCCGACTTCTCTATGCTCAAGAGGCTGGCTCGGGA...CAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032749.12 ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| CDS-3UTR CAA 90 bp | GTATCCTGGAGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCTCCCGAGCCAGCCTCTaGAGCATAGAGAAGTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VSWRIGHEFSPPKLVPKFSRASL*SIEKSG Trigger: TCCCGACTTCTCTATGCTCAAGAGGCTGGCTCGGGA...GAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032749.12 ENSMUST00000135053.8 ENSMUST00000150585.8 |
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| CDS-3UTR CAA 90 bp | CAGGCTCTTGTCAGAGGATGTGACTTCTGGGCCAAAGTCAACACTTCCACACTTGGTTTGTTCTCCACCTaGTACAGCTTGTCCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QALVRGCDFWAKVNTSTLGLFST*YSLSTS Trigger: TGAAGTGGACAAGCTGTACAAGGTGGAGAACAAACC...AAGTGTGGAAGTGTTGACTTTGGCCCAGAAGTCACATCCTCTGACAAGAGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000150585.8 |
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| CDS-3UTR CAA 90 bp | GGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTGCGCTGAGGGCAGGTTaGTTCTCCACCTTGTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GHEFSPPKLVPKFPALSIALRAG*FSTLYS Trigger: GCTGTACAAGGTGGAGAACAAACCTGCCCTCAGCGC...AATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032749.12 ENSMUST00000150585.8 |
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| CDS-3UTR CAA 90 bp | AGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGGACCAAGAAGCACAGTaGTTCATTGGCGCTGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: RIGHEFSPPKLVPKFPALDQEAQ*FIGAEG Trigger: GCCCTCAGCGCCAATGAACAACTGTGCTTCTTGGTC...CAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032749.12 ENSMUST00000150585.8 |
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| CDS-3UTR CAA 90 bp | TCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAAGTGTAGCTGGGCCCTCGTAAACCACTaGGGAGCAAAGTGCTGTCAC | + |
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Preference number: 5 (lower is better) Translates to: SPPKLVPKFPALSIKCSWALVNH*GAKCCH Trigger: GTGACAGCACTTTGCTCCCAAGTGGTTTACGAGGGC...CCAGCTACACTTAATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
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| CDS-3UTR CAA 90 bp | TCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAAGTGTAGCTGGAGCGCATGCTCGGTCTaGATTAGCTCCTGGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPPKLVPKFPALSIKCSWSACSV*ISSWKS Trigger: GGACTTCCAGGAGCTAATCAAGACCGAGCATGCGCT...CCAGCTACACTTAATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
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| CDS-3UTR CAA 90 bp | AGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGATTTTCCCTGCAGCCTaGTCCGTCACCAGCTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RIGHEFSPPKLVPKFPALIFPAA*SVTSLL Trigger: GAGCAAGCTGGTGACGGACAAGGCTGCAGGGAAAAT...CAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
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| CDS-3UTR CAA 90 bp | AATACTTCAGCACTGGCCAGGAAAACATCAGGATTTCACCTCACTCATGGCTTCATTCTGCCAGCCAGCTaGTCAGCATTGACAAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: NTSALARKTSGFHLTHGFILPAS*SALTRL Trigger: CAGTCTTGTCAATGCTGACAAGCTGGCTGGCAGAAT...GAAGCCATGAGTGAGGTGAAATCCTGATGTTTTCCTGGCCAGTGCTGAAGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000150585.8 |
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| CDS-3UTR CAA 90 bp | GTATCCTGGAGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCACCTTGTCCTCAGCGTaGAGTAGCACCTTCAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VSWRIGHEFSPPKLVPKFTLSSA*SSTFRL Trigger: GAGCCTGAAGGTGCTACTCAACGCTGAGGACAAGGT...GAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
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| CDS-3UTR CAA 90 bp | TCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAAGTGTAGCTGGCGAAAATTGCTCCTCTaGGCCAGAGAACTGAAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SPPKLVPKFPALSIKCSWRKLLL*ARELKA Trigger: CGCCTTCAGTTCTCTGGCCAAGAGGAGCAATTTTCG...CCAGCTACACTTAATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
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| CDS-3UTR CAA 90 bp | TCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAAGTGTAGCTGGTTGGAGAAGTGCTCATaGCGGATCTCACTGAACACC | + |
|
Preference number: 5 (lower is better) Translates to: SPPKLVPKFPALSIKCSWLEKCS*RISLNT Trigger: GGTGTTCAGTGAGATCCGCAATGAGCACTTCTCCAA...CCAGCTACACTTAATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
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| CDS-3UTR CAA 90 bp | AGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGCAGTCCCTTGAGCTCTaGCGACACGAAGTTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RIGHEFSPPKLVPKFPALQSLEL*RHEVLH Trigger: ATGAAGAACTTCGTGTCGCAAGAGCTCAAGGGACTG...CAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
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| CDS-3UTR CAA 90 bp | TCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAAGTGTAGCTGGGGTTTGTTCTCCACCTaGTACAGCTTGTCCACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPPKLVPKFPALSIKCSWGLFST*YSLSTS Trigger: TGAAGTGGACAAGCTGTACAAGGTGGAGAACAAACC...CCAGCTACACTTAATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000032749.12 ENSMUST00000150585.8 |
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| CDS-3UTR CAA 90 bp | GTATCCTGGAGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCATTCTGCCAGCCAGCTaGTCAGCATTGACAAGACTG | + |
|
Preference number: 5 (lower is better) Translates to: VSWRIGHEFSPPKLVPKFILPAS*SALTRL Trigger: CAGTCTTGTCAATGCTGACAAGCTGGCTGGCAGAAT...GAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032749.12 ENSMUST00000150585.8 |
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| CDS-3UTR CAA 90 bp | GTATCCTGGAGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCAGCACCTTCAGGCTCTaGTCAGAGGATGTGACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VSWRIGHEFSPPKLVPKFSTFRL*SEDVTS Trigger: AGAAGTCACATCCTCTGACAAGAGCCTGAAGGTGCT...GAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
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| CDS-3UTR CAA 90 bp | AGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAAGAAGCCAAAGACATaGGAGAAGTGCTCATTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RIGHEFSPPKLVPKFPALKKPKT*EKCSLR Trigger: CCGCAATGAGCACTTCTCCAATGTCTTTGGCTTCTT...CAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
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| CDS-3UTR CAA 90 bp | TCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTAAGTGTAGCTGGTTGTCCGTCACCAGCTaGCTCACTTTACTCTCTACT | + |
|
Preference number: 5 (lower is better) Translates to: SPPKLVPKFPALSIKCSWLSVTS*LTLLST Trigger: AGTAGAGAGTAAAGTGAGCAAGCTGGTGACGGACAA...CCAGCTACACTTAATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
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| CDS-3UTR CAA 90 bp | GGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTCTGATGGCACGAAAATaGCTCCTCTTGGCCAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GHEFSPPKLVPKFPALSILMARK*LLLARE Trigger: TTCTCTGGCCAAGAGGAGCAATTTTCGTGCCATCAG...AATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
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| CDS-3UTR CAA 90 bp | GTATCCTGGAGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCTCTGGTTTCCGACCTTaGGTTTCACTGTCTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: VSWRIGHEFSPPKLVPKFSGFRP*VSLSSS Trigger: GGAAGAAGACAGTGAAACCAAAGGTCGGAAACCAGA...GAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
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| CDS-3UTR CAA 90 bp | AGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGTCAACACTTCCACACTaGATTCGGAAGGTGTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RIGHEFSPPKLVPKFPALSTLPH*IRKVSS Trigger: AGATGACACCTTCCGAATCAAGTGTGGAAGTGTTGA...CAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
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| CDS-3UTR CAA 90 bp | GTATCCTGGAGGATAGGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCTCCTGGAAGTCCTGCTaGGTTTTCTTCTTCATGATT | + |
|
Preference number: 5 (lower is better) Translates to: VSWRIGHEFSPPKLVPKFSWKSC*VFFFMI Trigger: AATCATGAAGAAGAAAACCAAGCAGGACTTCCAGGA...GAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCCTATCCTCCAGGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
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| CDS-3UTR CAA 90 bp | GGACATGAATTCTCTCCCCCAAAATTAGTTCCAAAGTTCCCAGCTCTGAGTATTATCAAATTCAGCTTTTaGCTGATGGCACGAAAATTG | + |
|
Preference number: 5 (lower is better) Translates to: GHEFSPPKLVPKFPALSIIKFSF*LMARKL Trigger: CAATTTTCGTGCCATCAGCAAAAAGCTGAATTTGAT...AATACTCAGAGCTGGGAACTTTGGAACTAATTTTGGGGGAGAGAATTCATGTCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000032749.12 |
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| CDS CAA 90 bp | GGTCTGACCAAGAAGCACAGTTGTTCATTGGCGCTGAGGGCAGGTTaGTTCTCCACCTTGTACAGCTTGTCCACTTCATGTTGCTTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GLTKKHSCSLALRAG*FSTLYSLSTSCCFR Trigger: CCTGAAGCAACATGAAGTGGACAAGCTGTACAAGGTGGAGAACAAACCTGCCCTCAGCGCCAATGAACAACTGTGCTTCTTGGTCAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032749.12 ENSMUST00000150585.8 |
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| CDS CAA 72 bp | GCGCTGAGGGCAGGTTTGTTCTCCACCTTGTACAGCTaGTCCACTTCATGTTGCTTCAGGATAGAGACGTTA | + |
|
Preference number: 6 (lower is better) Translates to: ALRAGLFSTLYS*STSCCFRIETL Trigger: TAACGTCTCTATCCTGAAGCAACATGAAGTGGACAAGCTGTACAAGGTGGAGAACAAACCTGCCCTCAGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032749.12 ENSMUST00000150585.8 |
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| CDS CAA 72 bp | TGTTCATTGGCGCTGAGGGCAGGTTTGTTCTCCACCTaGTACAGCTTGTCCACTTCATGTTGCTTCAGGATA | + |
|
Preference number: 6 (lower is better) Translates to: CSLALRAGLFST*YSLSTSCCFRI Trigger: TATCCTGAAGCAACATGAAGTGGACAAGCTGTACAAGGTGGAGAACAAACCTGCCCTCAGCGCCAATGAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032749.12 ENSMUST00000150585.8 |
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| CDS CAA 72 bp | AAGAAGCACAGTTGTTCATTGGCGCTGAGGGCAGGTTaGTTCTCCACCTTGTACAGCTTGTCCACTTCATGT | + |
|
Preference number: 6 (lower is better) Translates to: KKHSCSLALRAG*FSTLYSLSTSC Trigger: ACATGAAGTGGACAAGCTGTACAAGGTGGAGAACAAACCTGCCCTCAGCGCCAATGAACAACTGTGCTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032749.12 ENSMUST00000150585.8 |
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| CDS CAA 90 bp | AAGCACAGTTGTTCATTGGCGCTGAGGGCAGGTTTGTTCTCCACCTaGTACAGCTTGTCCACTTCATGTTGCTTCAGGATAGAGACGTTA | + |
|
Preference number: 6 (lower is better) Translates to: KHSCSLALRAGLFST*YSLSTSCCFRIETL Trigger: TAACGTCTCTATCCTGAAGCAACATGAAGTGGACAAGCTGTACAAGGTGGAGAACAAACCTGCCCTCAGCGCCAATGAACAACTGTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032749.12 ENSMUST00000150585.8 |
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