Pregenerated sensors for VPS33A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029434Ensembl transcript IDs: ENSMUST00000031388.13, ENSMUST00000197467.2
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCAACGTGGTCCCCCACTTGGTGCTCTTAGCTCCTTCAGATGCTaGGATGATCAGGAGGCCATGCCTGCTCTGCTTCCGGCCGTGCTC | + |
|
Preference number: 1 (lower is better) Translates to: HQRGPPLGALSSFRC*DDQEAMPALLPAVL Trigger: GAGCACGGCCGGAAGCAGAGCAGGCATGGCCTCCTGATCATCTCAGCATCTGAAGGAGCTAAGAGCACCAAGTGGGGGACCACGTTGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR TCA 90 bp | GGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTaGGTCCAGGAGTTACCAACATGCACGCTCAGAAGTGCCTTTGGA | + |
|
Preference number: 1 (lower is better) Translates to: GHGGKQKSRQERLPW*VQELPTCTLRSAFG Trigger: TCCAAAGGCACTTCTGAGCGTGCATGTTGGTAACTCCTGGACTCACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR GCA 90 bp | ACATGCACGCTCAGAAGTGCCTTTGGAAGGTTAGCTGGAAGAGGCTaGCTGGCGCTCAGCTCACTCTTGATCAGTCCCTTCTGGGCAGAG | + |
|
Preference number: 1 (lower is better) Translates to: TCTLRSAFGRLAGRG*LALSSLLISPFWAE Trigger: CTCTGCCCAGAAGGGACTGATCAAGAGTGAGCTGAGCGCCAGGCAGCCTCTTCCAGCTAACCTTCCAAAGGCACTTCTGAGCGTGCATGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CCA 90 bp | GGAGCAGGAAGGAACATGCGCCCACTGCTTCCGTCCTCCTGTTCCTaGCCTTACATCCTTTGGCAACACGTTCACAGAGGCAGCTCATTG | + |
|
Preference number: 1 (lower is better) Translates to: GAGRNMRPLLPSSCS*PYILWQHVHRGSSL Trigger: CAATGAGCTGCCTCTGTGAACGTGTTGCCAAAGGATGTAAGGCCAGGAACAGGAGGACGGAAGCAGTGGGCGCATGTTCCTTCCTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CCA 90 bp | CGCCCTGATAATCACAACCCACCTCTAGTGCAAGCAGAGCTCGAGTaGAACAGAGCTCACATGGAGGCCTTCCTGGTTCTCCACACATGT | + |
|
Preference number: 1 (lower is better) Translates to: RPDNHNPPLVQAELE*NRAHMEAFLVLHTC Trigger: ACATGTGTGGAGAACCAGGAAGGCCTCCATGTGAGCTCTGTTCCACTCGAGCTCTGCTTGCACTAGAGGTGGGTTGTGATTATCAGGGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CCA 90 bp | CGGAGACAGAGCTTCATGATATTGAAAGAACAGAAGAACTGCCCATaGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACC | + |
|
Preference number: 1 (lower is better) Translates to: RRQSFMILKEQKNCP*RTWRKTEVPAGAPT Trigger: GGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCATGGGCAGTTCTTCTGTTCTTTCAATATCATGAAGCTCTGTCTCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CCA 90 bp | AGCTTCATGATATTGAAAGAACAGAAGAACTGCCCATGGAGGACATaGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTGAGT | + |
|
Preference number: 1 (lower is better) Translates to: SFMILKEQKNCPWRT*RKTEVPAGAPTLVS Trigger: ACTCACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCATGGGCAGTTCTTCTGTTCTTTCAATATCATGAAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR GCA 90 bp | TTACCACGGAGACAGAGCTTCATGATATTGAAAGAACAGAAGAACTaGCCATGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCG | + |
|
Preference number: 1 (lower is better) Translates to: LPRRQSFMILKEQKN*PWRTWRKTEVPAGA Trigger: CGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCATGGGCAGTTCTTCTGTTCTTTCAATATCATGAAGCTCTGTCTCCGTGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR GCA 90 bp | TGGAGACACAAATGTGCTTTGCAGGAAAGTGCACACACTGGACAATaGTGGCTTCCAATTCAACAGAAAACCACAGTCCTGGGCATGGGA | + |
|
Preference number: 1 (lower is better) Translates to: WRHKCALQESAHTGQ*WLPIQQKTTVLGMG Trigger: TCCCATGCCCAGGACTGTGGTTTTCTGTTGAATTGGAAGCCAGCATTGTCCAGTGTGTGCACTTTCCTGCAAAGCACATTTGTGTCTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR GCA 90 bp | CGCCTTAAGAATAACTCGGTAGAGACTGGAGACACAAATGTGCTTTaGAGGAAAGTGCACACACTGGACAATGCTGGCTTCCAATTCAAC | + |
|
Preference number: 1 (lower is better) Translates to: RLKNNSVETGDTNVL*RKVHTLDNAGFQFN Trigger: GTTGAATTGGAAGCCAGCATTGTCCAGTGTGTGCACTTTCCTGCAAAGCACATTTGTGTCTCCAGTCTCTACCGAGTTATTCTTAAGGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR TCA 90 bp | GCAGCTTTGAGCACTAAGGGGACTTACATCACAGGGCATAATGTATaGTACCACCACTTTGTGTGTGAATACAGAGGAAGCAAGTGTGTG | + |
|
Preference number: 1 (lower is better) Translates to: AALSTKGTYITGHNV*YHHFVCEYRGSKCV Trigger: CACACACTTGCTTCCTCTGTATTCACACACAAAGTGGTGGTATCATACATTATGCCCTGTGATGTAAGTCCCCTTAGTGCTCAAAGCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR GCA 90 bp | TGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTGAGTGAGCAGGAAGGAACATaGGCCCACTGCTTCCGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: WRTWRKTEVPAGAPTLVSEQEGT*AHCFRP Trigger: AGGACGGAAGCAGTGGGCGCATGTTCCTTCCTGCTC...ACTCACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR GCA 90 bp | ACAGAAGAACTGCCCATGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCTTAGCTGGAAGAGGCTaGCTGGCGCTCAGCTCACTC | + |
|
Preference number: 2 (lower is better) Translates to: TEELPMEDMEENRSPGRSLAGRG*LALSSL Trigger: GAGTGAGCTGAGCGCCAGGCAGCCTCTTCCAGCTAA...GCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCATGGGCAGTTCTTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR CCA 90 bp | ACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTGAGTCCAGGATTGATCAGTCCCTTCTaGGCAGAGACCTGCACAGTC | + |
|
Preference number: 2 (lower is better) Translates to: TWRKTEVPAGAPTLVSPGLISPF*AETCTV Trigger: GACTGTGCAGGTCTCTGCCCAGAAGGGACTGATCAA...TCCTGGACTCACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CAA 90 bp | TTTGGAAGGTTAGCTGGAAGAGGCTGCCTGGCGCTCAGCTCACTCTaGATCAGTCCCTTCTGGGCAGAGACCTGCACAGTCATGGCTAAC | + |
|
Preference number: 2 (lower is better) Translates to: FGRLAGRGCLALSSL*ISPFWAETCTVMAN Trigger: GTTAGCCATGACTGTGCAGGTCTCTGCCCAGAAGGGACTGATCAAGAGTGAGCTGAGCGCCAGGCAGCCTCTTCCAGCTAACCTTCCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR CCA 90 bp | TCCGGCCGTGCTCCACTCCCTGAGCACTGGTGCTGCTTGTCTCTTGTGACTGACCAGAAGAACTGCCCATaGAGGACATGGAGGAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: SGRAPLPEHWCCLSLVTDQKNCP*RTWRKT Trigger: TGTTTTCCTCCATGTCCTCCATGGGCAGTTCTTCTG...GTCAGTCACAAGAGACAAGCAGCACCAGTGCTCAGGGAGTGGAGCACGGCCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR TCA 90 bp | ACAGAAGAACTGCCCATGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGGGAGAGCTTTGGCCTaGAACTCATTATGGAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: TEELPMEDMEENRSPGRSGRALA*NSLWSP Trigger: TGGGCTCCATAATGAGTTTCAGGCCAAAGCTCTCCC...GCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCATGGGCAGTTCTTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR GCA 90 bp | TCCGGCCGTGCTCCACTCCCTGAGCACTGGTGCTGCTTGTCTCTTGTGACTGACCTGGAGACACAAATGTaGTTTGCAGGAAAGTGCACA | + |
|
Preference number: 2 (lower is better) Translates to: SGRAPLPEHWCCLSLVTDLETQM*FAGKCT Trigger: TGTGCACTTTCCTGCAAAGCACATTTGTGTCTCCAG...GTCAGTCACAAGAGACAAGCAGCACCAGTGCTCAGGGAGTGGAGCACGGCCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR GCA 90 bp | AGCTCGAGTGGAACAGAGCTCACATGGAGGCCTTCCTGGTTCTCCACACATGTCCTCCCTGAGCACTGGTaGTGCTTGTCTCTTGTGACT | + |
|
Preference number: 2 (lower is better) Translates to: SSSGTELTWRPSWFSTHVLPEHW*CLSLVT Trigger: AGTCACAAGAGACAAGCAGCACCAGTGCTCAGGGAG...GACATGTGTGGAGAACCAGGAAGGCCTCCATGTGAGCTCTGTTCCACTCGAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CAA 90 bp | GGAGTCTTGAGTGATGACAGGAAAGCCATCAACGTGGTCCCCCACTaGGTGCTCTTAGCTCCTTCAGATGCTGAGATGATCAGGAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: GVLSDDRKAINVVPH*VLLAPSDAEMIRRP Trigger: TGGCCTCCTGATCATCTCAGCATCTGAAGGAGCTAAGAGCACCAAGTGGGGGACCACGTTGATGGCTTTCCTGTCATCACTCAAGACTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR CCA 90 bp | ACGCTCAGAAGTGCCTTTGGAAGGTTAGCTGGAAGAGGCTGCCTGGCGCTCAGCGATCTCCTTTATTTCTaGAAGGGAGAGCTTTGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: TLRSAFGRLAGRGCLALSDLLYF*KGELWP Trigger: AGGCCAAAGCTCTCCCTTCCAGAAATAAAGGAGATC...GCTGAGCGCCAGGCAGCCTCTTCCAGCTAACCTTCCAAAGGCACTTCTGAGCGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR CCA 90 bp | TGGCCTGAAACTCATTATGGAGCCCAGGTTGTCCTCAAGCTTGCAGCAATCCTCTGGCCTTACATCCTTTaGCAACACGTTCACAGAGGC | + |
|
Preference number: 2 (lower is better) Translates to: WPETHYGAQVVLKLAAILWPYIL*QHVHRG Trigger: GCCTCTGTGAACGTGTTGCCAAAGGATGTAAGGCCA...GAGGATTGCTGCAAGCTTGAGGACAACCTGGGCTCCATAATGAGTTTCAGGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CAA 90 bp | AGCTTTGGCCTGAAACTCATTATGGAGCCCAGGTTGTCCTCAAGCTaGCAGCAATCCTCCTGCCTCTGTCTCTTATGCCCAGTTCATCAT | + |
|
Preference number: 2 (lower is better) Translates to: SFGLKLIMEPRLSSS*QQSSCLCLLCPVHH Trigger: ATGATGAACTGGGCATAAGAGACAGAGGCAGGAGGATTGCTGCAAGCTTGAGGACAACCTGGGCTCCATAATGAGTTTCAGGCCAAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR TCA 90 bp | GGGGTAAACAAACCACCCTGTCTGAGAATAAGCCTTCCGTTCCCACAGCCTTTCCCACCACTTTGTGTGTaGATACAGAGGAAGCAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: GVNKPPCLRISLPFPQPFPPLCV*IQRKQV Trigger: CACTTGCTTCCTCTGTATTCACACACAAAGTGGTGG...GAAAGGCTGTGGGAACGGAAGGCTTATTCTCAGACAGGGTGGTTTGTTTACCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CAA 90 bp | GGAGGCCTTCCTGGTTCTCCACACATGTCCCGATTTAATCTTCCCTaGACCACGTCTCTCTTGGTCTCTATCAATCCATTAGAGTACCCA | + |
|
Preference number: 2 (lower is better) Translates to: GGLPGSPHMSRFNLP*TTSLLVSINPLEYP Trigger: TGGGTACTCTAATGGATTGATAGAGACCAAGAGAGACGTGGTCAAGGGAAGATTAAATCGGGACATGTGTGGAGAACCAGGAAGGCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTTGACCACGTCTCTCTTGGTCTCTATCAATCCATTAGAGTACCCAGTTCTTGCCCATGGAGGACATaGAGGAAAACAGAAGTCCCG | + |
|
Preference number: 2 (lower is better) Translates to: SLDHVSLGLYQSIRVPSSCPWRT*RKTEVP Trigger: CGGGACTTCTGTTTTCCTCCATGTCCTCCATGGGCA...AGAACTGGGTACTCTAATGGATTGATAGAGACCAAGAGAGACGTGGTCAAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CAA 90 bp | GAGAGCTGTGTGTGGCAGTTACCACGGAGACAGAGCTTCATGATATaGAAAGAACAGAAGAACTGCCCATGGAGGACATGGAGGAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: ESCVWQLPRRQSFMI*KEQKNCPWRTWRKT Trigger: TGTTTTCCTCCATGTCCTCCATGGGCAGTTCTTCTGTTCTTTCAATATCATGAAGCTCTGTCTCCGTGGTAACTGCCACACACAGCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR GCA 90 bp | TCACAGGGCATAATGTATGATACCACCACTTTGTGTGTGAATACAGAGGAAGCAGAGGACAAGGTGGATTaGAGCCCCTGGCAGCTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: SQGIMYDTTTLCVNTEEAEDKVD*SPWQLK Trigger: TTTCAGCTGCCAGGGGCTGCAATCCACCTTGTCCTC...TGCTTCCTCTGTATTCACACACAAAGTGGTGGTATCATACATTATGCCCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR GCA 90 bp | TCCCTTGACCACGTCTCTCTTGGTCTCTATCAATCCATTAGAGTACCCAGTTCTATTAACCATAGAAACTaGACCTGGGCAAGGACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SLDHVSLGLYQSIRVPSSINHRN*TWARTR Trigger: CCTGGTCCTTGCCCAGGTGCAGTTTCTATGGTTAAT...AGAACTGGGTACTCTAATGGATTGATAGAGACCAAGAGAGACGTGGTCAAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR CCA 90 bp | GGGGTAAACAAACCACCCTGTCTGAGAATAAGCCTTCCGTTCCCACAGCCTTTCGAGGAAGCAAGTGTGTaGTTTTTCAAAAAGGTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: GVNKPPCLRISLPFPQPFEEASV*FFKKVF Trigger: GAAGACCTTTTTGAAAAACCACACACTTGCTTCCTC...GAAAGGCTGTGGGAACGGAAGGCTTATTCTCAGACAGGGTGGTTTGTTTACCCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR GCA 90 bp | TCACAGGGCATAATGTATGATACCACCACTTTGTGTGTGAATACAGAGGAAGCAATGCACGCTCAGAAGTaGCTTTGGAAGGTTAGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: SQGIMYDTTTLCVNTEEAMHAQK*LWKVSW Trigger: CCAGCTAACCTTCCAAAGGCACTTCTGAGCGTGCAT...TGCTTCCTCTGTATTCACACACAAAGTGGTGGTATCATACATTATGCCCTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR CCA 90 bp | AAATACCCAACTCTGGTTACTTATAATGTGCAGTGTATTGCTCCTGATTCTACACTAGAGAGCTGTGTGTaGCAGTTACCACGGAGACAG | + |
|
Preference number: 2 (lower is better) Translates to: KYPTLVTYNVQCIAPDSTLESCV*QLPRRQ Trigger: CTGTCTCCGTGGTAACTGCCACACACAGCTCTCTAG...TGTAGAATCAGGAGCAATACACTGCACATTATAAGTAACCAGAGTTGGGTATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR CCA 90 bp | CCCATCAAATGGAATGAGATCCAAGCTGTATTCTTCTCGATGAATAAAGGATCCGGCACAAACAAAATATaGAAATCCCTGGTAGGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: PIKWNEIQAVFFSMNKGSGTNKI*KSLVGP Trigger: TGGCCCTACCAGGGATTTCCATATTTTGTTTGTGCC...GGATCCTTTATTCATCGAGAAGAATACAGCTTGGATCTCATTCCATTTGATGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197467.2 |
||
| 3UTR-3UTR CAA 90 bp | ACGCTCAGAAGTGCCTTTGGAAGGTTAGCTGGAAGAGGCTGCCTGGCGCTCAGCAGGTTGTCCTCAAGCTaGCAGCAATCCTCCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TLRSAFGRLAGRGCLALSRLSSS*QQSSCL Trigger: GAGGCAGGAGGATTGCTGCAAGCTTGAGGACAACCT...GCTGAGCGCCAGGCAGCCTCTTCCAGCTAACCTTCCAAAGGCACTTCTGAGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR TCA 72 bp | GGTCCCCCACTTGGTGCTCTTAGCTCCTTCAGATGCTaGGATGATCAGGAGGCCATGCCTGCTCTGCTTCCG | + |
|
Preference number: 3 (lower is better) Translates to: GPPLGALSSFRC*DDQEAMPALLP Trigger: CGGAAGCAGAGCAGGCATGGCCTCCTGATCATCTCAGCATCTGAAGGAGCTAAGAGCACCAAGTGGGGGACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR GCA 72 bp | GAGCATAGAGAGGAGCAGGAAGGAACATGCGCCCACTaGTTCCGTCCTCCTGTTCCTGGCCTTACATCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: EHREEQEGTCAH*FRPPVPGLTSF Trigger: AAAGGATGTAAGGCCAGGAACAGGAGGACGGAAGCAGTGGGCGCATGTTCCTTCCTGCTCCTCTCTATGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR GCA 72 bp | CTCAGAAGTGCCTTTGGAAGGTTAGCTGGAAGAGGCTaGCTGGCGCTCAGCTCACTCTTGATCAGTCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LRSAFGRLAGRG*LALSSLLISPF Trigger: GAAGGGACTGATCAAGAGTGAGCTGAGCGCCAGGCAGCCTCTTCCAGCTAACCTTCCAAAGGCACTTCTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CCA 72 bp | GAGACGTCTTTAATCAGGACGGGCAGTGCAGCAGAGTaGTCCTCAGACTCAGGACAAGTCCAGACATGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: ETSLIRTGSAAE*SSDSGQVQTWG Trigger: ACCCCATGTCTGGACTTGTCCTGAGTCTGAGGACCACTCTGCTGCACTGCCCGTCCTGATTAAAGACGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR CAA 90 bp | TGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTGAGTATCCCTTCATCCAGGTaGCTTGTCCCTTCTTTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: WRTWRKTEVPAGAPTLVSIPSSR*LVPSLG Trigger: TCCTAAAGAAGGGACAAGCAACCTGGATGAAGGGAT...ACTCACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CCA 72 bp | CTGCTTCCGTCCTCCTGTTCCTGGCCTTACATCCTTTaGCAACACGTTCACAGAGGCAGCTCATTGTGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LLPSSCSWPYIL*QHVHRGSSLCG Trigger: ACCACACAATGAGCTGCCTCTGTGAACGTGTTGCCAAAGGATGTAAGGCCAGGAACAGGAGGACGGAAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CCA 72 bp | AACATGCACGCTCAGAAGTGCCTTTGGAAGGTTAGCTaGAAGAGGCTGCCTGGCGCTCAGCTCACTCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: NMHAQKCLWKVS*KRLPGAQLTLD Trigger: ATCAAGAGTGAGCTGAGCGCCAGGCAGCCTCTTCCAGCTAACCTTCCAAAGGCACTTCTGAGCGTGCATGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAAGAACTGCCCATGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCATTATGGAGCCCAGGTaGTCCTCAAGCTTGCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: TEELPMEDMEENRSPGRSIMEPR*SSSLQQ Trigger: TTGCTGCAAGCTTGAGGACAACCTGGGCTCCATAAT...GCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCATGGGCAGTTCTTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR CAA 90 bp | TCCGGCCGTGCTCCACTCCCTGAGCACTGGTGCTGCTTGTCTCTTGTGACTGACATTCTGATTCTCTTTTaGAATTCGTCCCCTCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: SGRAPLPEHWCCLSLVTDILILF*NSSPQL Trigger: GAGCTGAGGGGACGAATTCAAAAAGAGAATCAGAAT...GTCAGTCACAAGAGACAAGCAGCACCAGTGCTCAGGGAGTGGAGCACGGCCGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR GCA 72 bp | AGCTCACTCTTGATCAGTCCCTTCTGGGCAGAGACCTaGACAGTCATGGCTAACGCAGAGAGCAGAAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: SSLLISPFWAET*TVMANAESRNV Trigger: GACATTTCTGCTCTCTGCGTTAGCCATGACTGTGCAGGTCTCTGCCCAGAAGGGACTGATCAAGAGTGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CCA 72 bp | ATATTGAAAGAACAGAAGAACTGCCCATGGAGGACATaGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACC | + |
|
Preference number: 3 (lower is better) Translates to: ILKEQKNCPWRT*RKTEVPAGAPT Trigger: GGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCATGGGCAGTTCTTCTGTTCTTTCAATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTTGACCACGTCTCTCTTGGTCTCTATCAATCCATTAGAGTACCCAGTTCTAGGGGGTGTGCAGAGTaGAGTACAGCTAGAGGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SLDHVSLGLYQSIRVPSSRGCAE*STARGL Trigger: TAGCCCTCTAGCTGTACTCAACTCTGCACACCCCCT...AGAACTGGGTACTCTAATGGATTGATAGAGACCAAGAGAGACGTGGTCAAGGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR GCA 72 bp | TCAAGCTTGCAGCAATCCTCCTGCCTCTGTCTCTTATaGCCAGTTCATCATCCCTTCATCCAGGTTGCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: SSLQQSSCLCLL*PVHHPFIQVAC Trigger: ACAAGCAACCTGGATGAAGGGATGATGAACTGGGCATAAGAGACAGAGGCAGGAGGATTGCTGCAAGCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CCA 72 bp | TGTGCTTTGCAGGAAAGTGCACACACTGGACAATGCTaGCTTCCAATTCAACAGAAAACCACAGTCCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: CALQESAHTGQC*LPIQQKTTVLG Trigger: GCCCAGGACTGTGGTTTTCTGTTGAATTGGAAGCCAGCATTGTCCAGTGTGTGCACTTTCCTGCAAAGCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CCA 72 bp | GAGTTGAGTACAGCTAGAGGGCTAGAGAGCTGTGTGTaGCAGTTACCACGGAGACAGAGCTTCATGATATTG | + |
|
Preference number: 3 (lower is better) Translates to: ELSTARGLESCV*QLPRRQSFMIL Trigger: CAATATCATGAAGCTCTGTCTCCGTGGTAACTGCCACACACAGCTCTCTAGCCCTCTAGCTGTACTCAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR TCA 72 bp | GGATCTCCTTTATTTCTGGAAGGGAGAGCTTTGGCCTaGAACTCATTATGGAGCCCAGGTTGTCCTCAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GSPLFLEGRALA*NSLWSPGCPQA Trigger: AGCTTGAGGACAACCTGGGCTCCATAATGAGTTTCAGGCCAAAGCTCTCCCTTCCAGAAATAAAGGAGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR GCA 72 bp | AACCACAGTCCTGGGCATGGGACATCTTCTAGAATATaGCACTGTGGATCAGTGGTCAGAATTCTGATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: NHSPGHGTSSRI*HCGSVVRILIL Trigger: GAGAATCAGAATTCTGACCACTGATCCACAGTGGCATATTCTAGAAGATGTCCCATGCCCAGGACTGTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR GCA 72 bp | AATAACTCGGTAGAGACTGGAGACACAAATGTGCTTTaGAGGAAAGTGCACACACTGGACAATGCTGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: NNSVETGDTNVL*RKVHTLDNAGF Trigger: GAAGCCAGCATTGTCCAGTGTGTGCACTTTCCTGCAAAGCACATTTGTGTCTCCAGTCTCTACCGAGTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR GCA 72 bp | CAGTCATGGCTAACGCAGAGAGCAGAAATGTCATTATaGCAAGAAGCCCCTTCGAACCTCTTAGTTGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: QSWLTQRAEMSL*QEAPSNLLVVQ Trigger: CTGAACAACTAAGAGGTTCGAAGGGGCTTCTTGGCATAATGACATTTCTGCTCTCTGCGTTAGCCATGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR GCA 72 bp | AAATGTGCTTTGCAGGAAAGTGCACACACTGGACAATaGTGGCTTCCAATTCAACAGAAAACCACAGTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: KCALQESAHTGQ*WLPIQQKTTVL Trigger: CAGGACTGTGGTTTTCTGTTGAATTGGAAGCCAGCATTGTCCAGTGTGTGCACTTTCCTGCAAAGCACATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR GCA 72 bp | AGACAGAGCTTCATGATATTGAAAGAACAGAAGAACTaGCCATGGAGGACATGGAGGAAAACAGAAGTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: RQSFMILKEQKN*PWRTWRKTEVP Trigger: CGGGACTTCTGTTTTCCTCCATGTCCTCCATGGGCAGTTCTTCTGTTCTTTCAATATCATGAAGCTCTGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR TCA 72 bp | AGCACTAAGGGGACTTACATCACAGGGCATAATGTATaGTACCACCACTTTGTGTGTGAATACAGAGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: STKGTYITGHNV*YHHFVCEYRGS Trigger: GCTTCCTCTGTATTCACACACAAAGTGGTGGTATCATACATTATGCCCTGTGATGTAAGTCCCCTTAGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR GCA 90 bp | CCCATGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTGGGGCCCTGGGAGAATaGGGAGAACCTCCTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: PMEDMEENRSPGRSAYPGGALGE*GEPPRC Trigger: GCATCGAGGAGGTTCTCCGCATTCTCCCAGGGCCCC...ACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR GCA 90 bp | ACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTGAGTCCAGGAGGCTGGCGTTTCTTCTaGAGCCCGGTGGGCAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: TWRKTEVPAGAPTLVSPGGWRFF*SPVGSG Trigger: GCCACTGCCCACCGGGCTGCAGAAGAAACGCCAGCC...TCCTGGACTCACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR GCA 90 bp | ACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTGAGTCCAGGAGGTCCTTCCCACCACTaGCGCCACCCTGCTTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TWRKTEVPAGAPTLVSPGGPSHH*RHPASW Trigger: CCAAGAAGCAGGGTGGCGGCAGTGGTGGGAAGGACC...TCCTGGACTCACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR GCA 90 bp | ACGCTCAGAAGTGCCTTTGGAAGGTTAGCTGGAAGAGGCTGCCTGGCGCTCAGCGATCCCCTGGCTGCCTaGATGTGGGGTAGCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TLRSAFGRLAGRGCLALSDPLAA*MWGSWD Trigger: GTCCCAGCTACCCCACATGCAGGCAGCCAGGGGATC...GCTGAGCGCCAGGCAGCCTCTTCCAGCTAACCTTCCAAAGGCACTTCTGAGCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | CCCATGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTCTGCGTGGTACAGGCTaGTCTGGTCGCCTTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PMEDMEENRSPGRSAYPGLRGTG*SGRLPG Trigger: ACCTGGAAGGCGACCAGACCAGCCTGTACCACGCAG...ACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR TCA 90 bp | CCCATGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTTCTTCGCCTTCTTGCTaGGCACAGAGCCCACAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: PMEDMEENRSPGRSAYPGSSPSC*AQSPQR Trigger: ACGCTGTGGGCTCTGTGCTCAGCAAGAAGGCGAAGA...ACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCATGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR TCA 90 bp | AGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTGAGTCCAGGAGTTACCGCTCCTCTGCGGAGTTaGGCTGAAGCTTCTTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RKTEVPAGAPTLVSPGVTAPLRS*AEASWP Trigger: AGGCCAAGAAGCTTCAGCTCAACTCCGCAGAGGAGC...GGTAACTCCTGGACTCACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR TCA 90 bp | GGCCTGAAACTCATTATGGAGCCCAGGTTGTCCTCAAGCTTGCAGCAATCCTCCCCCCTGTCTGAGCCTTaGGCAGGCCGGCCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLKLIMEPRLSSSLQQSSPLSEP*AGRPSP Trigger: TGGAGAAGGCCGGCCTGCTCAAGGCTCAGACAGGGG...GGAGGATTGCTGCAAGCTTGAGGACAACCTGGGCTCCATAATGAGTTTCAGGCC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR GCA 90 bp | ACGCTCAGAAGTGCCTTTGGAAGGTTAGCTGGAAGAGGCTGCCTGGCGCTCAGCCCACTGCCGCCACCCTaGTTCTTGGGTGCAAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: TLRSAFGRLAGRGCLALSPLPPP*FLGANF Trigger: GAAGTTTGCACCCAAGAAGCAGGGTGGCGGCAGTGG...GCTGAGCGCCAGGCAGCCTCTTCCAGCTAACCTTCCAAAGGCACTTCTGAGCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | CCCATGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTTCTTCTGCAGCCCGGTaGGCAGTGGCTGTCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PMEDMEENRSPGRSAYPGSSAAR*AVAVFL Trigger: AAGAAAGACAGCCACTGCCCACCGGGCTGCAGAAGA...ACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | GGGGTAAACAAACCACCCTGTCTGAGAATAAGCCTTCCGTTCCCACAGCCTTTCGATGCTCCGCCAGCCTaGCCGGGAAAGGAGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GVNKPPCLRISLPFPQPFDAPPA*PGKELS Trigger: GCTCAGCTCCTTTCCCGGCCAGGCTGGCGGAGCATC...GAAAGGCTGTGGGAACGGAAGGCTTATTCTCAGACAGGGTGGTTTGTTTACCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | AGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTGAGTCCAGGAGTTACCTTCAAAGTGGGGCCCTaGGAGAATGCGGAGAACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKTEVPAGAPTLVSPGVTFKVGP*ENAENL Trigger: GAGGTTCTCCGCATTCTCCCAGGGCCCCACTTTGAA...GGTAACTCCTGGACTCACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CAA 72 bp | TTAGCTGGAAGAGGCTGCCTGGCGCTCAGCTCACTCTaGATCAGTCCCTTCTGGGCAGAGACCTGCACAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LAGRGCLALSSL*ISPFWAETCTV Trigger: GACTGTGCAGGTCTCTGCCCAGAAGGGACTGATCAAGAGTGAGCTGAGCGCCAGGCAGCCTCTTCCAGCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR GCA 90 bp | CCCATGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTGTTCTTGACATCAGCTaGGGGCAGACGACTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PMEDMEENRSPGRSAYPGVLDIS*GQTTSF Trigger: AAAGGAAGTCGTCTGCCCGCAGCTGATGTCAAGAAC...ACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR GCA 90 bp | TGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTGAGTAGCTGGGACACAAACTaGTTGATCTCCCCGACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: WRTWRKTEVPAGAPTLVSSWDTN*LISPTV Trigger: GACAGTCGGGGAGATCAAGCAGTTTGTGTCCCAGCT...ACTCACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR GCA 90 bp | TTAATGTCTGTGCAGTCATGTGGTTGCCAGGGCTATCAGACCCATAGTCTTAGCGGAGAACCTCCTCGATaGTCCGCCAGCCTGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LMSVQSCGCQGYQTHSLSGEPPR*SASLAG Trigger: CCCGGCCAGGCTGGCGGAGCATCGAGGAGGTTCTCC...GCTAAGACTATGGGTCTGATAGCCCTGGCAACCACATGACTGCACAGACATTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGAAACTCATTATGGAGCCCAGGTTGTCCTCAAGCTTGCAGCAATCCTCAGCCCCTTGGCTGCGTaGTACAGGCTGGTCTGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: WPETHYGAQVVLKLAAILSPLAA*YRLVWS Trigger: CGACCAGACCAGCCTGTACCACGCAGCCAAGGGGCT...GAGGATTGCTGCAAGCTTGAGGACAACCTGGGCTCCATAATGAGTTTCAGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | TGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTGAGTGGGAACACTGAGTTCTaGCTTCCTGTGAACTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: WRTWRKTEVPAGAPTLVSGNTEF*LPVNSL Trigger: GAGGGAGTTCACAGGAAGCCAGAACTCAGTGTTCCC...ACTCACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | AGTGGAACAGAGCTCACATGGAGGCCTTCCTGGTTCTCCACACATGTCCCGATTGCTTCTTGGCCTCCGTaGGAAGGTCCTTCCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SGTELTWRPSWFSTHVPIASWPP*EGPSHH Trigger: GTGGTGGGAAGGACCTTCCCACGGAGGCCAAGAAGC...AATCGGGACATGTGTGGAGAACCAGGAAGGCCTCCATGTGAGCTCTGTTCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR GCA 90 bp | CCCATGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTCCGGACATGAACTCCTaGTCCACTGTCAACTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: PMEDMEENRSPGRSAYPGPDMNS*STVNLS Trigger: TGATAAGTTGACAGTGGAGCAGGAGTTCATGTCCGG...ACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | TTGCAGCAATCCTCCTGCCTCTGTCTCTTATGCCCAGTTCATCATCCCTTCATCGGGTCATCAGCCCCTTaGCTGCGTGGTACAGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LQQSSCLCLLCPVHHPFIGSSAP*LRGTGW Trigger: CCAGCCTGTACCACGCAGCCAAGGGGCTGATGACCC...GATGAAGGGATGATGAACTGGGCATAAGAGACAGAGGCAGGAGGATTGCTGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | ACAGAAGAACTGCCCATGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCCCTCCATCTTCCAGCTaGGACAAAAATCGCAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TEELPMEDMEENRSPGRSPPSSS*DKNRRA Trigger: CGCCCTGCGATTTTTGTCCCAGCTGGAAGATGGAGG...GCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCATGGGCAGTTCTTCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR TCA 90 bp | TCCTCCTGTTCCTGGCCTTACATCCTTTGGCAACACGTTCACAGAGGCAGCTCACCAGGTAGCACTCTTTaGAAGCGCCCTCTGACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSCSWPYILWQHVHRGSSPGSTL*KRPLTP Trigger: TGGAGTCAGAGGGCGCTTTCAAAGAGTGCTACCTGG...TGAGCTGCCTCTGTGAACGTGTTGCCAAAGGATGTAAGGCCAGGAACAGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR TCA 90 bp | TGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTGAGTACTCCCTCTTCATCCTaGCCATCATATTGGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: WRTWRKTEVPAGAPTLVSTPSSS*PSYWPL Trigger: AAGTGGCCAATATGATGGTCAGGATGAAGAGGGAGT...ACTCACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR TCA 90 bp | TCCCTTGACCACGTCTCTCTTGGTCTCTATCAATCCATTAGAGTACCCAGTTCTTTTCTGCCCCCTGTCTaGGCCTTGAGCAGGCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLDHVSLGLYQSIRVPSSFLPPV*ALSRPA Trigger: GGCCGGCCTGCTCAAGGCTCAGACAGGGGGCAGAAA...AGAACTGGGTACTCTAATGGATTGATAGAGACCAAGAGAGACGTGGTCAAGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR TCA 90 bp | GCCCAGTTCATCATCCCTTCATCCAGGTTGCTTGTCCCTTCTTTAGGATTAAGAGGCCGGGAAAGGAGCTaGGCCAGTCGCACGCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: AQFIIPSSRLLVPSLGLRGRERS*ASRTLS Trigger: ACTCAGCGTGCGACTGGCTCAGCTCCTTTCCCGGCC...TCTTAATCCTAAAGAAGGGACAAGCAACCTGGATGAAGGGATGATGAACTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR GCA 90 bp | TCCGGCCGTGCTCCACTCCCTGAGCACTGGTGCTGCTTGTCTCTTGTGACTGACGATGCTTTTGGGCAATaGAGTCCTCGATGTAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGRAPLPEHWCCLSLVTDDAFGQ*SPRCNC Trigger: ACAGTTACATCGAGGACTGCATTGCCCAAAAGCATC...GTCAGTCACAAGAGACAAGCAGCACCAGTGCTCAGGGAGTGGAGCACGGCCGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CAA 72 bp | ACTGCTTCCGTCCTCCTGTTCCTGGCCTTACATCCTTaGGCAACACGTTCACAGAGGCAGCTCATTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TASVLLFLALHP*ATRSQRQLIVW Trigger: CCACACAATGAGCTGCCTCTGTGAACGTGTTGCCAAAGGATGTAAGGCCAGGAACAGGAGGACGGAAGCAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR TCA 90 bp | TGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTGAGTAGAAAGGCTTTTCCATaGGAGCTTCTATCCAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WRTWRKTEVPAGAPTLVSRKAFP*ELLSSC Trigger: ACAGCTGGATAGAAGCTCTCATGGAAAAGCCTTTCT...ACTCACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | TTGCAGCAATCCTCCTGCCTCTGTCTCTTATGCCCAGTTCATCATCCCTTCATCCTGGCTGCCTGCATGTaGGGTAGCTGGGACACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQQSSCLCLLCPVHHPFILAACM*GSWDTN Trigger: GTTTGTGTCCCAGCTACCCCACATGCAGGCAGCCAG...GATGAAGGGATGATGAACTGGGCATAAGAGACAGAGGCAGGAGGATTGCTGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | GCCCAGTTCATCATCCCTTCATCCAGGTTGCTTGTCCCTTCTTTAGGATTAAGATGGCGAGCGATCCCCTaGCTGCCTGCATGTGGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AQFIIPSSRLLVPSLGLRWRAIP*LPACGV Trigger: TACCCCACATGCAGGCAGCCAGGGGATCGCTCGCCA...TCTTAATCCTAAAGAAGGGACAAGCAACCTGGATGAAGGGATGATGAACTGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CAA 72 bp | GAGAGCTTTGGCCTGAAACTCATTATGGAGCCCAGGTaGTCCTCAAGCTTGCAGCAATCCTCCTGCCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: ESFGLKLIMEPR*SSSLQQSSCLC Trigger: ACAGAGGCAGGAGGATTGCTGCAAGCTTGAGGACAACCTGGGCTCCATAATGAGTTTCAGGCCAAAGCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CAA 72 bp | CACCTGAGTATTTTCAGGGAAAGGGGGTGTGCAGAGTaGAGTACAGCTAGAGGGCTAGAGAGCTGTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLSIFRERGCAE*STARGLESCVW Trigger: CCACACACAGCTCTCTAGCCCTCTAGCTGTACTCAACTCTGCACACCCCCTTTCCCTGAAAATACTCAGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR GCA 90 bp | GGCCTTACATCCTTTGGCAACACGTTCACAGAGGCAGCTCATTGTGTGGTGACCACCCTGCTTCTTGGGTaGAAACTTCTCTGGAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: GLTSFGNTFTEAAHCVVTTLLLG*KLLWRQ Trigger: TTGCCTCCAGAGAAGTTTGCACCCAAGAAGCAGGGT...GGTCACCACACAATGAGCTGCCTCTGTGAACGTGTTGCCAAAGGATGTAAGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR TCA 90 bp | TGGCCTGAAACTCATTATGGAGCCCAGGTTGTCCTCAAGCTTGCAGCAATCCTCAAACACGGGGAACACTaGGTTCTGGCTTCCTGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WPETHYGAQVVLKLAAILKHGEH*VLASCE Trigger: TTCACAGGAAGCCAGAACTCAGTGTTCCCCGTGTTT...GAGGATTGCTGCAAGCTTGAGGACAACCTGGGCTCCATAATGAGTTTCAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR GCA 90 bp | GCGCCCTCTGACTCCATGGATAAGAGGTCCCCATCAAATGGAATGAGATCCAAGGTTCTTGACATCAGCTaGGGGCAGACGACTTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: APSDSMDKRSPSNGMRSKVLDIS*GQTTSF Trigger: AAAGGAAGTCGTCTGCCCGCAGCTGATGTCAAGAAC...CTTGGATCTCATTCCATTTGATGGGGACCTCTTATCCATGGAGTCAGAGGGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197467.2 |
||
| CDS-3UTR GCA 90 bp | GCCCAGTTCATCATCCCTTCATCCAGGTTGCTTGTCCCTTCTTTAGGATTAAGAGTTCCATACAGCGCCTaGAGGGTCATCAGCCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AQFIIPSSRLLVPSLGLRVPYSA*RVISPL Trigger: CAAGGGGCTGATGACCCTGCAGGCGCTGTATGGAAC...TCTTAATCCTAAAGAAGGGACAAGCAACCTGGATGAAGGGATGATGAACTGGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | TTAATGTCTGTGCAGTCATGTGGTTGCCAGGGCTATCAGACCCATAGTCTTAGCTCTGCAATTGAGGTGTaGTTGGCGAGCGATCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LMSVQSCGCQGYQTHSLSSAIEV*LASDPL Trigger: CAGGGGATCGCTCGCCAACCACACCTCAATTGCAGA...GCTAAGACTATGGGTCTGATAGCCCTGGCAACCACATGACTGCACAGACATTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CAA 72 bp | CTGAAACTCATTATGGAGCCCAGGTTGTCCTCAAGCTaGCAGCAATCCTCCTGCCTCTGTCTCTTATGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LKLIMEPRLSSS*QQSSCLCLLCP Trigger: TGGGCATAAGAGACAGAGGCAGGAGGATTGCTGCAAGCTTGAGGACAACCTGGGCTCCATAATGAGTTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CAA 72 bp | AGTGATGACAGGAAAGCCATCAACGTGGTCCCCCACTaGGTGCTCTTAGCTCCTTCAGATGCTGAGATGATC | + |
|
Preference number: 4 (lower is better) Translates to: SDDRKAINVVPH*VLLAPSDAEMI Trigger: GATCATCTCAGCATCTGAAGGAGCTAAGAGCACCAAGTGGGGGACCACGTTGATGGCTTTCCTGTCATCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | TCCCTTGACCACGTCTCTCTTGGTCTCTATCAATCCATTAGAGTACCCAGTTCTCGCCACCCTGCTTCTTaGGTGCAAACTTCTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLDHVSLGLYQSIRVPSSRHPAS*VQTSLE Trigger: CTCCAGAGAAGTTTGCACCCAAGAAGCAGGGTGGCG...AGAACTGGGTACTCTAATGGATTGATAGAGACCAAGAGAGACGTGGTCAAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGAAACTCATTATGGAGCCCAGGTTGTCCTCAAGCTTGCAGCAATCCTCCAGCACCTTGATGAGTaGATGCTTTTGGGCAATGCA | + |
|
Preference number: 4 (lower is better) Translates to: WPETHYGAQVVLKLAAILQHLDE*MLLGNA Trigger: TGCATTGCCCAAAAGCATCCACTCATCAAGGTGCTG...GAGGATTGCTGCAAGCTTGAGGACAACCTGGGCTCCATAATGAGTTTCAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | GGCCTTACATCCTTTGGCAACACGTTCACAGAGGCAGCTCATTGTGTGGTGACCTGTTTTCCGGATTGTTaGGTAATTGTTTCTGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: GLTSFGNTFTEAAHCVVTCFPDC*VIVSAP Trigger: GGGGGCAGAAACAATTACCCAACAATCCGGAAAACA...GGTCACCACACAATGAGCTGCCTCTGTGAACGTGTTGCCAAAGGATGTAAGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR TCA 90 bp | TCCTCCTGTTCCTGGCCTTACATCCTTTGGCAACACGTTCACAGAGGCAGCTCACCCCATCAAATGGAATaGGATCCAAGCTGTATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSCSWPYILWQHVHRGSSPHQME*DPSCIL Trigger: AAGAATACAGCTTGGATCTCATTCCATTTGATGGGG...TGAGCTGCCTCTGTGAACGTGTTGCCAAAGGATGTAAGGCCAGGAACAGGAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR TCA 90 bp | GGGGTAAACAAACCACCCTGTCTGAGAATAAGCCTTCCGTTCCCACAGCCTTTCCCTCGATGTAACTGTTaGCCTTATCAGTGTCTATCC | + |
|
Preference number: 4 (lower is better) Translates to: GVNKPPCLRISLPFPQPFPRCNC*PYQCLS Trigger: GGATAGACACTGATAAGGTCAACAGTTACATCGAGG...GAAAGGCTGTGGGAACGGAAGGCTTATTCTCAGACAGGGTGGTTTGTTTACCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR GCA 90 bp | TTGCAGCAATCCTCCTGCCTCTGTCTCTTATGCCCAGTTCATCATCCCTTCATCTCAGGAGATCCACATTaGGATCAAGCAGCAAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LQQSSCLCLLCPVHHPFISGDPH*DQAARG Trigger: ACCTCTTGCTGCTTGATCGCAATGTGGATCTCCTGA...GATGAAGGGATGATGAACTGGGCATAAGAGACAGAGGCAGGAGGATTGCTGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | TGGCCTGAAACTCATTATGGAGCCCAGGTTGTCCTCAAGCTTGCAGCAATCCTCGGCACAAACAAAATATaGAAATCCCTGGTAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: WPETHYGAQVVLKLAAILGTNKI*KSLVGP Trigger: TGGCCCTACCAGGGATTTCCATATTTTGTTTGTGCC...GAGGATTGCTGCAAGCTTGAGGACAACCTGGGCTCCATAATGAGTTTCAGGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | TTAATGTCTGTGCAGTCATGTGGTTGCCAGGGCTATCAGACCCATAGTCTTAGCTGCATGTGGGGTAGCTaGGACACAAACTGCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LMSVQSCGCQGYQTHSLSCMWGS*DTNCLI Trigger: GATCAAGCAGTTTGTGTCCCAGCTACCCCACATGCA...GCTAAGACTATGGGTCTGATAGCCCTGGCAACCACATGACTGCACAGACATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | TTAATGTCTGTGCAGTCATGTGGTTGCCAGGGCTATCAGACCCATAGTCTTAGCGACTCTGTTTTCTCCTaGCTGGCGTTTCTTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LMSVQSCGCQGYQTHSLSDSVFS*LAFLLQ Trigger: CTGCAGAAGAAACGCCAGCCAGGAGAAAACAGAGTC...GCTAAGACTATGGGTCTGATAGCCCTGGCAACCACATGACTGCACAGACATTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR TCA 90 bp | TCCCTTGACCACGTCTCTCTTGGTCTCTATCAATCCATTAGAGTACCCAGTTCTTGGGGTTTTGTTCATTaGCATCGTCCATCCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLDHVSLGLYQSIRVPSSWGFVH*HRPSRG Trigger: GCCTCTGGATGGACGATGTCAATGAACAAAACCCCA...AGAACTGGGTACTCTAATGGATTGATAGAGACCAAGAGAGACGTGGTCAAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | TTGCAGCAATCCTCCTGCCTCTGTCTCTTATGCCCAGTTCATCATCCCTTCATCGGGTGCAAACTTCTCTaGAGGCAACTTCACATAACT | + |
|
Preference number: 4 (lower is better) Translates to: LQQSSCLCLLCPVHHPFIGCKLL*RQLHIT Trigger: AGTTATGTGAAGTTGCCTCCAGAGAAGTTTGCACCC...GATGAAGGGATGATGAACTGGGCATAAGAGACAGAGGCAGGAGGATTGCTGCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | TCACAGGGCATAATGTATGATACCACCACTTTGTGTGTGAATACAGAGGAAGCACAGCCCGGTGGGCAGTaGCTGTCTTTCTTCAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQGIMYDTTTLCVNTEEAQPGGQ*LSFFKV Trigger: CACTTTGAAGAAAGACAGCCACTGCCCACCGGGCTG...TGCTTCCTCTGTATTCACACACAAAGTGGTGGTATCATACATTATGCCCTGTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | TCACAGGGCATAATGTATGATACCACCACTTTGTGTGTGAATACAGAGGAAGCACTGTTTTCTCCTGGCTaGCGTTTCTTCTGCAGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: SQGIMYDTTTLCVNTEEALFSPG*RFFCSP Trigger: CGGGCTGCAGAAGAAACGCCAGCCAGGAGAAAACAG...TGCTTCCTCTGTATTCACACACAAAGTGGTGGTATCATACATTATGCCCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CAA 72 bp | CCTGGTTCTCCACACATGTCCCGATTTAATCTTCCCTaGACCACGTCTCTCTTGGTCTCTATCAATCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: PGSPHMSRFNLP*TTSLLVSINPL Trigger: TAATGGATTGATAGAGACCAAGAGAGACGTGGTCAAGGGAAGATTAAATCGGGACATGTGTGGAGAACCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | TCACAGGGCATAATGTATGATACCACCACTTTGTGTGTGAATACAGAGGAAGCAATGAGTGGATGCTTTTaGGCAATGCAGTCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: SQGIMYDTTTLCVNTEEAMSGCF*AMQSSM Trigger: CATCGAGGACTGCATTGCCCAAAAGCATCCACTCAT...TGCTTCCTCTGTATTCACACACAAAGTGGTGGTATCATACATTATGCCCTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CAA 72 bp | CTTACATCACAGGGCATAATGTATGATACCACCACTTaGTGTGTGAATACAGAGGAAGCAAGTGTGTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LTSQGIMYDTTT*CVNTEEASVWF Trigger: AAACCACACACTTGCTTCCTCTGTATTCACACACAAAGTGGTGGTATCATACATTATGCCCTGTGATGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CCA 90 bp | AAATACCCAACTCTGGTTACTTATAATGTGCAGTGTATTGCTCCTGATTCTACACCTTTCCCAAAGATCTaGGGGATAGTTCCATACAGC | + |
|
Preference number: 4 (lower is better) Translates to: KYPTLVTYNVQCIAPDSTPFPKI*GIVPYS Trigger: GCTGTATGGAACTATCCCCCAGATCTTTGGGAAAGG...TGTAGAATCAGGAGCAATACACTGCACATTATAAGTAACCAGAGTTGGGTATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| 3UTR CAA 72 bp | AATACCCAACTCTGGTTACTTATAATGTGCAGTGTATaGCTCCTGATTCTACATGAGAAAAACAAGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NTQLWLLIMCSV*LLILHEKNKKK Trigger: TTTCTTCTTGTTTTTCTCATGTAGAATCAGGAGCAATACACTGCACATTATAAGTAACCAGAGTTGGGTATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CCA 90 bp | GGGCCCTGGGAGAATGCGGAGAACCTCCTCGATGCTCCGCCAGCCTaGCCGGGAAAGGAGCTGAGCCAGTCGCACGCTGAGTGGAGCATA | + |
|
Preference number: 5 (lower is better) Translates to: GPWENAENLLDAPPA*PGKELSQSHAEWSI Trigger: TATGCTCCACTCAGCGTGCGACTGGCTCAGCTCCTTTCCCGGCCAGGCTGGCGGAGCATCGAGGAGGTTCTCCGCATTCTCCCAGGGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CCA 90 bp | CTGCAGCCCGGTGGGCAGTGGCTGTCTTTCTTCAAAGTGGGGCCCTaGGAGAATGCGGAGAACCTCCTCGATGCTCCGCCAGCCTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LQPGGQWLSFFKVGP*ENAENLLDAPPAWP Trigger: CGGCCAGGCTGGCGGAGCATCGAGGAGGTTCTCCGCATTCTCCCAGGGCCCCACTTTGAAGAAAGACAGCCACTGCCCACCGGGCTGCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS GCA 90 bp | TTTCTTCAAAGTGGGGCCCTGGGAGAATGCGGAGAACCTCCTCGATaGTCCGCCAGCCTGGCCGGGAAAGGAGCTGAGCCAGTCGCACGC | + |
|
Preference number: 5 (lower is better) Translates to: FLQSGALGECGEPPR*SASLAGKGAEPVAR Trigger: GCGTGCGACTGGCTCAGCTCCTTTCCCGGCCAGGCTGGCGGAGCATCGAGGAGGTTCTCCGCATTCTCCCAGGGCCCCACTTTGAAGAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS GCA 90 bp | CGGTGGGCAGTGGCTGTCTTTCTTCAAAGTGGGGCCCTGGGAGAATaGGGAGAACCTCCTCGATGCTCCGCCAGCCTGGCCGGGAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RWAVAVFLQSGALGE*GEPPRCSASLAGKG Trigger: TCCTTTCCCGGCCAGGCTGGCGGAGCATCGAGGAGGTTCTCCGCATTCTCCCAGGGCCCCACTTTGAAGAAAGACAGCCACTGCCCACCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS TCA 90 bp | TGCTCCGCCAGCCTGGCCGGGAAAGGAGCTGAGCCAGTCGCACGCTaGGTGGAGCATAACCGCTGTACACATAGGATATGTCTGTGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: CSASLAGKGAEPVAR*VEHNRCTHRICLWG Trigger: ACCCCACAGACATATCCTATGTGTACAGCGGTTATGCTCCACTCAGCGTGCGACTGGCTCAGCTCCTTTCCCGGCCAGGCTGGCGGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS GCA 90 bp | GGGGATAGTTCCATACAGCGCCTGCAGGGTCATCAGCCCCTTGGCTaGGTGGTACAGGCTGGTCTGGTCGCCTTCCAGGTAGCACTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GDSSIQRLQGHQPLG*VVQAGLVAFQVALF Trigger: AAAGAGTGCTACCTGGAAGGCGACCAGACCAGCCTGTACCACGCAGCCAAGGGGCTGATGACCCTGCAGGCGCTGTATGGAACTATCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CAA 90 bp | GCTCCGGCGAGGCACAAACAAAATATGGAAATCCCTGGTAGGGCCACGCCTGTCTTGCTCCCAGCGCACTaGTCCAGGAACTCGCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: APARHKQNMEIPGRATPVLLPAH*SRNSRS Trigger: GCTGCGCGAGTTCCTGGACAAGTGCGCTGGGAGCAA...GACAGGCGTGGCCCTACCAGGGATTTCCATATTTTGTTTGTGCCTCGCCGGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197467.2 |
||
| CDS-3UTR CAA 90 bp | AAGGATCCCAAAACCCCCAGGTCCTTCAGCCGCTGCTCACACAGTAGGCTCCGGTCCCACACTATTGCCTaGCTCCCAGCGCACTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KDPKTPRSFSRCSHSRLRSHTIA*LPAHLS Trigger: GGACAAGTGCGCTGGGAGCAAGGCAATAGTGTGGGA...CCGGAGCCTACTGTGTGAGCAGCGGCTGAAGGACCTGGGGGTTTTGGGATCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000197467.2 |
||
| CDS GCA 90 bp | CACTCTCCTTTCCCAAAGATCTGGGGGATAGTTCCATACAGCGCCTaGAGGGTCATCAGCCCCTTGGCTGCGTGGTACAGGCTGGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HSPFPKIWGIVPYSA*RVISPLAAWYRLVW Trigger: CCAGACCAGCCTGTACCACGCAGCCAAGGGGCTGATGACCCTGCAGGCGCTGTATGGAACTATCCCCCAGATCTTTGGGAAAGGAGAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CCA 90 bp | CCGCCAGCCTGGCCGGGAAAGGAGCTGAGCCAGTCGCACGCTGAGTaGAGCATAACCGCTGTACACATAGGATATGTCTGTGGGGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: PPAWPGKELSQSHAE*SITAVHIGYVCGVL Trigger: CAAAACCCCACAGACATATCCTATGTGTACAGCGGTTATGCTCCACTCAGCGTGCGACTGGCTCAGCTCCTTTCCCGGCCAGGCTGGCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CAA 90 bp | AGCTCGAGTGGAACAGAGCTCACATGGAGGCCTTCCTGGTTCTCCACACATGTCAGGGTCATCAGCCCCTaGGCTGCGTGGTACAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSGTELTWRPSWFSTHVRVISP*AAWYRL Trigger: CAGCCTGTACCACGCAGCCAAGGGGCTGATGACCCT...GACATGTGTGGAGAACCAGGAAGGCCTCCATGTGAGCTCTGTTCCACTCGAGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CAA 90 bp | TCCGGCCGTGCTCCACTCCCTGAGCACTGGTGCTGCTTGTCTCTTGTGACTGACATCCTGACCATCATATaGGCCACTTGCCGAGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: SGRAPLPEHWCCLSLVTDILTII*ATCRAH Trigger: GTGTGCTCGGCAAGTGGCCAATATGATGGTCAGGAT...GTCAGTCACAAGAGACAAGCAGCACCAGTGCTCAGGGAGTGGAGCACGGCCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS GCA 90 bp | CACAGCGTTGAAGTTCTTGTCTCGGATCTCGGCGTAGAGCTCCTCTaGGGAGTTGAGCTGAAGCTTCTTGGCCTCCGTGGGAAGGTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: HSVEVLVSDLGVELL*GVELKLLGLRGKVL Trigger: AAGGACCTTCCCACGGAGGCCAAGAAGCTTCAGCTCAACTCCGCAGAGGAGCTCTACGCCGAGATCCGAGACAAGAACTTCAACGCTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CAA 90 bp | ACAGAAGAACTGCCCATGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCTCCCACACTATTGCCTaGCTCCCAGCGCACTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TEELPMEDMEENRSPGRSSHTIA*LPAHLS Trigger: GGACAAGTGCGCTGGGAGCAAGGCAATAGTGTGGGA...GCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCATGGGCAGTTCTTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CAA 90 bp | TGGAGGACATGGAGGAAAACAGAAGTCCCGGCAGGAGCGCCTACCCTGGTGAGTATGATCTTCGCCTTCTaGCTGAGCACAGAGCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: WRTWRKTEVPAGAPTLVSMIFAF*LSTEPT Trigger: TGTGGGCTCTGTGCTCAGCAAGAAGGCGAAGATCAT...ACTCACCAGGGTAGGCGCTCCTGCCGGGACTTCTGTTTTCCTCCATGTCCTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CAA 90 bp | AGTGGAACAGAGCTCACATGGAGGCCTTCCTGGTTCTCCACACATGTCCCGATTGCAATTGAGGTGTGGTaGGCGAGCGATCCCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SGTELTWRPSWFSTHVPIAIEVW*ASDPLA Trigger: AGCCAGGGGATCGCTCGCCAACCACACCTCAATTGC...AATCGGGACATGTGTGGAGAACCAGGAAGGCCTCCATGTGAGCTCTGTTCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS GCA 90 bp | TCAGTCCAAATGGTCCTGTTAAGTACTCATCCCACACTATTGCCTTaGTCCCAGCGCACTTGTCCAGGAACTCGCGCAGCTCCCGACGCA | + |
|
Preference number: 5 (lower is better) Translates to: SVQMVLLSTHPTLLP*SQRTCPGTRAAPDA Trigger: TGCGTCGGGAGCTGCGCGAGTTCCTGGACAAGTGCGCTGGGAGCAAGGCAATAGTGTGGGATGAGTACTTAACAGGACCATTTGGACTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031388.13 ENSMUST00000197467.2 |
||
| CDS GCA 90 bp | CGTGGGAAGGTCCTTCCCACCACTGCCGCCACCCTGCTTCTTGGGTaGAAACTTCTCTGGAGGCAACTTCACATAACTGTTCTGAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGKVLPTTAATLLLG*KLLWRQLHITVLNA Trigger: GGCATTCAGAACAGTTATGTGAAGTTGCCTCCAGAGAAGTTTGCACCCAAGAAGCAGGGTGGCGGCAGTGGTGGGAAGGACCTTCCCACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CCA 90 bp | AGCCGCTGCTCACACAGTAGGCTCCGGCGAGGCACAAACAAAATATaGAAATCCCTGGTAGGGCCACGCCTGTCCTCACTGAGTACATTC | + |
|
Preference number: 5 (lower is better) Translates to: SRCSHSRLRRGTNKI*KSLVGPRLSSLSTF Trigger: GAATGTACTCAGTGAGGACAGGCGTGGCCCTACCAGGGATTTCCATATTTTGTTTGTGCCTCGCCGGAGCCTACTGTGTGAGCAGCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CAA 90 bp | TCCGGCCGTGCTCCACTCCCTGAGCACTGGTGCTGCTTGTCTCTTGTGACTGACGTGTTTTCCGGATTGTaGGGTAATTGTTTCTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGRAPLPEHWCCLSLVTDVFSGL*GNCFCP Trigger: GGGGCAGAAACAATTACCCAACAATCCGGAAAACAC...GTCAGTCACAAGAGACAAGCAGCACCAGTGCTCAGGGAGTGGAGCACGGCCGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CCA 90 bp | ATCATATTGGCCACTTGCCGAGCACACTCTCCTTTCCCAAAGATCTaGGGGATAGTTCCATACAGCGCCTGCAGGGTCATCAGCCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IILATCRAHSPFPKI*GIVPYSACRVISPL Trigger: CAAGGGGCTGATGACCCTGCAGGCGCTGTATGGAACTATCCCCCAGATCTTTGGGAAAGGAGAGTGTGCTCGGCAAGTGGCCAATATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CCA 90 bp | TCTTCAGAAGTGGTGACGTCTTTGATTAACTCTGCAATTGAGGTGTaGTTGGCGAGCGATCCCCTGGCTGCCTGCATGTGGGGTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSEVVTSLINSAIEV*LASDPLAACMWGSW Trigger: CCAGCTACCCCACATGCAGGCAGCCAGGGGATCGCTCGCCAACCACACCTCAATTGCAGAGTTAATCAAAGACGTCACCACTTCTGAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CCA 90 bp | AGTTTAGTGGTCGCAATGACATACTCGGTGCCTCCATCTTCCAGCTaGGACAAAAATCGCAGGGCGGCTATTTCCGCAAAGGTGACGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SLVVAMTYSVPPSSS*DKNRRAAISAKVTP Trigger: GGGCGTCACCTTTGCGGAAATAGCCGCCCTGCGATTTTTGTCCCAGCTGGAAGATGGAGGCACCGAGTATGTCATTGCGACCACTAAACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CAA 90 bp | GGGGTAAACAAACCACCCTGTCTGAGAATAAGCCTTCCGTTCCCACAGCCTTTCTCCAGCACCTTCTGCTaGAGCCCGCTGTTGCACACA | + |
|
Preference number: 5 (lower is better) Translates to: GVNKPPCLRISLPFPQPFSSTFC*SPLLHT Trigger: TGTGTGCAACAGCGGGCTCAAGCAGAAGGTGCTGGA...GAAAGGCTGTGGGAACGGAAGGCTTATTCTCAGACAGGGTGGTTTGTTTACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CAA 90 bp | GGCCTTACATCCTTTGGCAACACGTTCACAGAGGCAGCTCATTGTGTGGTGACCCCGGCCTTCTCCAGGTaGTTCAAGGTCAGTATGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GLTSFGNTFTEAAHCVVTPAFSR*FKVSMC Trigger: GCACATACTGACCTTGAACAACCTGGAGAAGGCCGG...GGTCACCACACAATGAGCTGCCTCTGTGAACGTGTTGCCAAAGGATGTAAGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CAA 90 bp | TCCCTTGACCACGTCTCTCTTGGTCTCTATCAATCCATTAGAGTACCCAGTTCTTTGCTCCCAGCGCACTaGTCCAGGAACTCGCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLDHVSLGLYQSIRVPSSLLPAH*SRNSRS Trigger: GCTGCGCGAGTTCCTGGACAAGTGCGCTGGGAGCAA...AGAACTGGGTACTCTAATGGATTGATAGAGACCAAGAGAGACGTGGTCAAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS TCA 90 bp | TTTTCCGGATTGTTGGGTAATTGTTTCTGCCCCCTGTCTGAGCCTTaGGCAGGCCGGCCTTCTCCAGGTTGTTCAAGGTCAGTATGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FSGLLGNCFCPLSEP*AGRPSPGCSRSVCA Trigger: AGCACATACTGACCTTGAACAACCTGGAGAAGGCCGGCCTGCTCAAGGCTCAGACAGGGGGCAGAAACAATTACCCAACAATCCGGAAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CCA 90 bp | CTTCCCACCACTGCCGCCACCCTGCTTCTTGGGTGCAAACTTCTCTaGAGGCAACTTCACATAACTGTTCTGAATGCCGTAAATCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: LPTTAATLLLGCKLL*RQLHITVLNAVNLI Trigger: GATGAGATTTACGGCATTCAGAACAGTTATGTGAAGTTGCCTCCAGAGAAGTTTGCACCCAAGAAGCAGGGTGGCGGCAGTGGTGGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CCA 90 bp | CGATCAAGCAGCAAGAGGTTATCAAACACGGGGAACACTGAGTTCTaGCTTCCTGTGAACTCCCTCTTCATCCTGACCATCATATTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSSSKRLSNTGNTEF*LPVNSLFILTIILA Trigger: GGCCAATATGATGGTCAGGATGAAGAGGGAGTTCACAGGAAGCCAGAACTCAGTGTTCCCCGTGTTTGATAACCTCTTGCTGCTTGATCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS-3UTR CAA 90 bp | TTGCAGCAATCCTCCTGCCTCTGTCTCTTATGCCCAGTTCATCATCCCTTCATCTGGGACACAAACTGCTaGATCTCCCCGACTGTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: LQQSSCLCLLCPVHHPFIWDTNC*ISPTVL Trigger: TAAGACAGTCGGGGAGATCAAGCAGTTTGTGTCCCA...GATGAAGGGATGATGAACTGGGCATAAGAGACAGAGGCAGGAGGATTGCTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS TCA 90 bp | CACATTGCGATCAAGCAGCAAGAGGTTATCAAACACGGGGAACACTaGGTTCTGGCTTCCTGTGAACTCCCTCTTCATCCTGACCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: HIAIKQQEVIKHGEH*VLASCELPLHPDHH Trigger: ATGATGGTCAGGATGAAGAGGGAGTTCACAGGAAGCCAGAACTCAGTGTTCCCCGTGTTTGATAACCTCTTGCTGCTTGATCGCAATGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS GCA 72 bp | AGTGGGGCCCTGGGAGAATGCGGAGAACCTCCTCGATaGTCCGCCAGCCTGGCCGGGAAAGGAGCTGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SGALGECGEPPR*SASLAGKGAEP Trigger: TGGCTCAGCTCCTTTCCCGGCCAGGCTGGCGGAGCATCGAGGAGGTTCTCCGCATTCTCCCAGGGCCCCACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CAA 90 bp | CCTGTTAAGTACTCATCCCACACTATTGCCTTGCTCCCAGCGCACTaGTCCAGGAACTCGCGCAGCTCCCGACGCACCGCCTCGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PVKYSSHTIALLPAH*SRNSRSSRRTASRS Trigger: GCTGCGCGAGGCGGTGCGTCGGGAGCTGCGCGAGTTCCTGGACAAGTGCGCTGGGAGCAAGGCAATAGTGTGGGATGAGTACTTAACAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031388.13 ENSMUST00000197467.2 |
||
| CDS CCA 72 bp | GTGTGGTTGGCGAGCGATCCCCTGGCTGCCTGCATGTaGGGTAGCTGGGACACAAACTGCTTGATCTCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: VWLASDPLAACM*GSWDTNCLISP Trigger: CGGGGAGATCAAGCAGTTTGTGTCCCAGCTACCCCACATGCAGGCAGCCAGGGGATCGCTCGCCAACCACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CAA 72 bp | TACTCATCCCACACTATTGCCTTGCTCCCAGCGCACTaGTCCAGGAACTCGCGCAGCTCCCGACGCACCGCC | + |
|
Preference number: 6 (lower is better) Translates to: YSSHTIALLPAH*SRNSRSSRRTA Trigger: GGCGGTGCGTCGGGAGCTGCGCGAGTTCCTGGACAAGTGCGCTGGGAGCAAGGCAATAGTGTGGGATGAGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031388.13 ENSMUST00000197467.2 |
||
| CDS CCA 72 bp | GGTGGGCAGTGGCTGTCTTTCTTCAAAGTGGGGCCCTaGGAGAATGCGGAGAACCTCCTCGATGCTCCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: GGQWLSFFKVGP*ENAENLLDAPP Trigger: TGGCGGAGCATCGAGGAGGTTCTCCGCATTCTCCCAGGGCCCCACTTTGAAGAAAGACAGCCACTGCCCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CAA 72 bp | ATAGTTCCATACAGCGCCTGCAGGGTCATCAGCCCCTaGGCTGCGTGGTACAGGCTGGTCTGGTCGCCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IVPYSACRVISP*AAWYRLVWSPS Trigger: GGAAGGCGACCAGACCAGCCTGTACCACGCAGCCAAGGGGCTGATGACCCTGCAGGCGCTGTATGGAACTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS TCA 72 bp | TGTCTCGGATCTCGGCGTAGAGCTCCTCTGCGGAGTTaGGCTGAAGCTTCTTGGCCTCCGTGGGAAGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CLGSRRRAPLRS*AEASWPPWEGP Trigger: AGGACCTTCCCACGGAGGCCAAGAAGCTTCAGCTCAACTCCGCAGAGGAGCTCTACGCCGAGATCCGAGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS GCA 72 bp | TCCGTGGGAAGGTCCTTCCCACCACTGCCGCCACCCTaGTTCTTGGGTGCAAACTTCTCTGGAGGCAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SVGRSFPPLPPP*FLGANFSGGNF Trigger: GAAGTTGCCTCCAGAGAAGTTTGCACCCAAGAAGCAGGGTGGCGGCAGTGGTGGGAAGGACCTTCCCACGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS GCA 72 bp | TTCCCAAAGATCTGGGGGATAGTTCCATACAGCGCCTaGAGGGTCATCAGCCCCTTGGCTGCGTGGTACAGG | + |
|
Preference number: 6 (lower is better) Translates to: FPKIWGIVPYSA*RVISPLAAWYR Trigger: CCTGTACCACGCAGCCAAGGGGCTGATGACCCTGCAGGCGCTGTATGGAACTATCCCCCAGATCTTTGGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS GCA 72 bp | GAAGTTCTTGTCTCGGATCTCGGCGTAGAGCTCCTCTaGGGAGTTGAGCTGAAGCTTCTTGGCCTCCGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: EVLVSDLGVELL*GVELKLLGLRG Trigger: CCCACGGAGGCCAAGAAGCTTCAGCTCAACTCCGCAGAGGAGCTCTACGCCGAGATCCGAGACAAGAACTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS GCA 72 bp | CTGGCTGCCTGCATGTGGGGTAGCTGGGACACAAACTaGTTGATCTCCCCGACTGTCTTAGCGTTGTGTCGC | + |
|
Preference number: 6 (lower is better) Translates to: LAACMWGSWDTN*LISPTVLALCR Trigger: GCGACACAACGCTAAGACAGTCGGGGAGATCAAGCAGTTTGTGTCCCAGCTACCCCACATGCAGGCAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CCA 72 bp | ACTCTGCAATTGAGGTGTGGTTGGCGAGCGATCCCCTaGCTGCCTGCATGTGGGGTAGCTGGGACACAAACT | + |
|
Preference number: 6 (lower is better) Translates to: TLQLRCGWRAIP*LPACGVAGTQT Trigger: AGTTTGTGTCCCAGCTACCCCACATGCAGGCAGCCAGGGGATCGCTCGCCAACCACACCTCAATTGCAGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS TCA 72 bp | AGCCTGGCCGGGAAAGGAGCTGAGCCAGTCGCACGCTaGGTGGAGCATAACCGCTGTACACATAGGATATGT | + |
|
Preference number: 6 (lower is better) Translates to: SLAGKGAEPVAR*VEHNRCTHRIC Trigger: ACATATCCTATGTGTACAGCGGTTATGCTCCACTCAGCGTGCGACTGGCTCAGCTCCTTTCCCGGCCAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CCA 72 bp | GCCACTTGCCGAGCACACTCTCCTTTCCCAAAGATCTaGGGGATAGTTCCATACAGCGCCTGCAGGGTCATC | + |
|
Preference number: 6 (lower is better) Translates to: ATCRAHSPFPKI*GIVPYSACRVI Trigger: GATGACCCTGCAGGCGCTGTATGGAACTATCCCCCAGATCTTTGGGAAAGGAGAGTGTGCTCGGCAAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CAA 72 bp | GTGAGCTGGGAGGCGAGTGGCGTCAGGAGATCCACATaGCGATCAAGCAGCAAGAGGTTATCAAACACGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VSWEASGVRRST*RSSSKRLSNTG Trigger: CCCCGTGTTTGATAACCTCTTGCTGCTTGATCGCAATGTGGATCTCCTGACGCCACTCGCCTCCCAGCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CAA 90 bp | ATCAGTCCAAATGGTCCTGTTAAGTACTCATCCCACACTATTGCCTaGCTCCCAGCGCACTTGTCCAGGAACTCGCGCAGCTCCCGACGC | + |
|
Preference number: 6 (lower is better) Translates to: ISPNGPVKYSSHTIA*LPAHLSRNSRSSRR Trigger: GCGTCGGGAGCTGCGCGAGTTCCTGGACAAGTGCGCTGGGAGCAAGGCAATAGTGTGGGATGAGTACTTAACAGGACCATTTGGACTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031388.13 ENSMUST00000197467.2 |
||
| CDS CAA 90 bp | GTGCGATCAGTCCAAATGGTCCTGTTAAGTACTCATCCCACACTATaGCCTTGCTCCCAGCGCACTTGTCCAGGAACTCGCGCAGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VRSVQMVLLSTHPTL*PCSQRTCPGTRAAP Trigger: GGGAGCTGCGCGAGTTCCTGGACAAGTGCGCTGGGAGCAAGGCAATAGTGTGGGATGAGTACTTAACAGGACCATTTGGACTGATCGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031388.13 ENSMUST00000197467.2 |
||
| CDS CAA 90 bp | GCGTTGTGTCGCTCCTCGAACGCTGCAGAGATGATCTTCGCCTTCTaGCTGAGCACAGAGCCCACAGCGTTGAAGTTCTTGTCTCGGATC | + |
|
Preference number: 6 (lower is better) Translates to: ALCRSSNAAEMIFAF*LSTEPTALKFLSRI Trigger: GATCCGAGACAAGAACTTCAACGCTGTGGGCTCTGTGCTCAGCAAGAAGGCGAAGATCATCTCTGCAGCGTTCGAGGAGCGACACAACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS GCA 72 bp | CCCGACTGTCTTAGCGTTGTGTCGCTCCTCGAACGCTaGAGAGATGATCTTCGCCTTCTTGCTGAGCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: PDCLSVVSLLER*RDDLRLLAEHR Trigger: TCTGTGCTCAGCAAGAAGGCGAAGATCATCTCTGCAGCGTTCGAGGAGCGACACAACGCTAAGACAGTCGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CCA 72 bp | AGCACCTTCTGCTTGAGCCCGCTGTTGCACACAGACTaGAGGCAAACCAGTCTCAGCACCTTGATGAGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: STFCLSPLLHTD*RQTSLSTLMSG Trigger: TCCACTCATCAAGGTGCTGAGACTGGTTTGCCTCCAGTCTGTGTGCAACAGCGGGCTCAAGCAGAAGGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CCA 72 bp | TGGCCGGGAAAGGAGCTGAGCCAGTCGCACGCTGAGTaGAGCATAACCGCTGTACACATAGGATATGTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: WPGKELSQSHAE*SITAVHIGYVC Trigger: ACAGACATATCCTATGTGTACAGCGGTTATGCTCCACTCAGCGTGCGACTGGCTCAGCTCCTTTCCCGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS TCA 72 bp | TTGTTGGGTAATTGTTTCTGCCCCCTGTCTGAGCCTTaGGCAGGCCGGCCTTCTCCAGGTTGTTCAAGGTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLGNCFCPLSEP*AGRPSPGCSRS Trigger: TGACCTTGAACAACCTGGAGAAGGCCGGCCTGCTCAAGGCTCAGACAGGGGGCAGAAACAATTACCCAACAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS GCA 72 bp | ATGGTCCTGTTAAGTACTCATCCCACACTATTGCCTTaGTCCCAGCGCACTTGTCCAGGAACTCGCGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: MVLLSTHPTLLP*SQRTCPGTRAA Trigger: AGCTGCGCGAGTTCCTGGACAAGTGCGCTGGGAGCAAGGCAATAGTGTGGGATGAGTACTTAACAGGACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031388.13 ENSMUST00000197467.2 |
||
| CDS GCA 72 bp | AGTGTGACTCTGTTTTCTCCTGGCTGGCGTTTCTTCTaGAGCCCGGTGGGCAGTGGCTGTCTTTCTTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SVTLFSPGWRFF*SPVGSGCLSSK Trigger: CTTTGAAGAAAGACAGCCACTGCCCACCGGGCTGCAGAAGAAACGCCAGCCAGGAGAAAACAGAGTCACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CCA 72 bp | GTCGCAATGACATACTCGGTGCCTCCATCTTCCAGCTaGGACAAAAATCGCAGGGCGGCTATTTCCGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: VAMTYSVPPSSS*DKNRRAAISAK Trigger: CTTTGCGGAAATAGCCGCCCTGCGATTTTTGTCCCAGCTGGAAGATGGAGGCACCGAGTATGTCATTGCGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CAA 72 bp | AATGGTCCTGTTAAGTACTCATCCCACACTATTGCCTaGCTCCCAGCGCACTTGTCCAGGAACTCGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: NGPVKYSSHTIA*LPAHLSRNSRS Trigger: GCTGCGCGAGTTCCTGGACAAGTGCGCTGGGAGCAAGGCAATAGTGTGGGATGAGTACTTAACAGGACCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031388.13 ENSMUST00000197467.2 |
||
| CDS CAA 72 bp | GTCCAAATGGTCCTGTTAAGTACTCATCCCACACTATaGCCTTGCTCCCAGCGCACTTGTCCAGGAACTCGC | + |
|
Preference number: 6 (lower is better) Translates to: VQMVLLSTHPTL*PCSQRTCPGTR Trigger: GCGAGTTCCTGGACAAGTGCGCTGGGAGCAAGGCAATAGTGTGGGATGAGTACTTAACAGGACCATTTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031388.13 ENSMUST00000197467.2 |
||
| CDS CAA 72 bp | GACACAAACTGCTTGATCTCCCCGACTGTCTTAGCGTaGTGTCGCTCCTCGAACGCTGCAGAGATGATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: DTNCLISPTVLA*CRSSNAAEMIF Trigger: GAAGATCATCTCTGCAGCGTTCGAGGAGCGACACAACGCTAAGACAGTCGGGGAGATCAAGCAGTTTGTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CCA 72 bp | AGACTGGAGGCAAACCAGTCTCAGCACCTTGATGAGTaGATGCTTTTGGGCAATGCAGTCCTCGATGTAACT | + |
|
Preference number: 6 (lower is better) Translates to: RLEANQSQHLDE*MLLGNAVLDVT Trigger: AGTTACATCGAGGACTGCATTGCCCAAAAGCATCCACTCATCAAGGTGCTGAGACTGGTTTGCCTCCAGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS TCA 72 bp | ATCAAGCAGCAAGAGGTTATCAAACACGGGGAACACTaGGTTCTGGCTTCCTGTGAACTCCCTCTTCATCCT | + |
|
Preference number: 6 (lower is better) Translates to: IKQQEVIKHGEH*VLASCELPLHP Trigger: AGGATGAAGAGGGAGTTCACAGGAAGCCAGAACTCAGTGTTCCCCGTGTTTGATAACCTCTTGCTGCTTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||
| CDS CAA 72 bp | GCAAACCAGTCTCAGCACCTTGATGAGTGGATGCTTTaGGGCAATGCAGTCCTCGATGTAACTGTTGACCTT | + |
|
Preference number: 6 (lower is better) Translates to: ANQSQHLDEWML*GNAVLDVTVDL Trigger: AAGGTCAACAGTTACATCGAGGACTGCATTGCCCAAAAGCATCCACTCATCAAGGTGCTGAGACTGGTTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031388.13 |
||