Pregenerated sensors for VPS29 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029462Ensembl transcript IDs: ENSMUST00000111729.10, ENSMUST00000117868.8, ENSMUST00000118765.8, ENSMUST00000118830.8, ENSMUST00000145821.2, ENSMUST00000154686.2, ENSMUST00000155671.8
Found 124 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCGAAGTCTCCTCTCACGATGTGGACGTCGCCAGCCAGAGTCTTaGGATAGTCGTAGCTCTCCTTGGTGCAGAGGTTGCCGGTGCAGA | + |
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Preference number: 1 (lower is better) Translates to: HRSLLSRCGRRQPES*DSRSSPWCRGCRCR Trigger: TCTGCACCGGCAACCTCTGCACCAAGGAGAGCTACGACTATCTCAAGACTCTGGCTGGCGACGTCCACATCGTGAGAGGAGACTTCGATG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154686.2 |
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| 3UTR GCA 90 bp | TCATGCCCGAGTGAAGAAACACAGGAGGAGGATCTGCTGAATAAGTaGATGCAGTCCATGTCCATCCAAGAACAAGGCCCAGCTCACGCC | + |
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Preference number: 1 (lower is better) Translates to: SCPSEETQEEDLLNK*MQSMSIQEQGPAHA Trigger: GGCGTGAGCTGGGCCTTGTTCTTGGATGGACATGGACTGCATGCACTTATTCAGCAGATCCTCCTCCTGTGTTTCTTCACTCGGGCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR TCA 90 bp | TCCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGAGATCTaGTGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGCACTCA | + |
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Preference number: 1 (lower is better) Translates to: SPATTWWLTTIRNEI*CPLLVCLKTATVHS Trigger: TGAGTGCACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCTCATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR CCA 90 bp | GCACTGCTGGCATTGAACACAAAGAGATCTGCCTGCCTCTACCTCTaGAACACTGGGGTTGAATCTGTGCACCACCACACCAGCTCTTAT | + |
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Preference number: 1 (lower is better) Translates to: ALLALNTKRSACLYL*NTGVESVHHHTSSY Trigger: ATAAGAGCTGGTGTGGTGGTGCACAGATTCAACCCCAGTGTTCCAGAGGTAGAGGCAGGCAGATCTCTTTGTGTTCAATGCCAGCAGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
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| 3UTR CCA 90 bp | AGGGCTAAGCTAGCCATGTCTCCCCACGGAATAACTTGGTGTCCGTaGATCAGACCGATCTTGAACTGGCCCACAGTCACAACCTTTTGT | + |
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Preference number: 1 (lower is better) Translates to: RAKLAMSPHGITWCP*IRPILNWPTVTTFC Trigger: ACAAAAGGTTGTGACTGTGGGCCAGTTCAAGATCGGTCTGATCCACGGACACCAAGTTATTCCGTGGGGAGACATGGCTAGCTTAGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111729.10 ENSMUST00000154686.2 |
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| 3UTR CCA 90 bp | CCTGGAACTTATGGGGCTGGAGTTATAGACAGTATAGCTGCCATGTaGATGCTGGGAATTGAACCCCATCCTGGGAAAGCAGGCAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: PGTYGAGVIDSIAAM*MLGIEPHPGKAGSA Trigger: AGCACTGCCTGCTTTCCCAGGATGGGGTTCAATTCCCAGCATCCACATGGCAGCTATACTGTCTATAACTCCAGCCCCATAAGTTCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR TCA 90 bp | CTAGTCCTCCACACCAAGCTCAGCCATCAGCTAACATCCACATGCTaGGTGCACAGGGAAGAGTGGACCATGTATGGGATAGTACTAGTA | + |
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Preference number: 1 (lower is better) Translates to: LVLHTKLSHQLTSTC*VHREEWTMYGIVLV Trigger: TACTAGTACTATCCCATACATGGTCCACTCTTCCCTGTGCACTCAGCATGTGGATGTTAGCTGATGGCTGAGCTTGGTGTGGAGGACTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR GCA 90 bp | TTGTGTGTGTGTCCTGAGATAAGAATGTCCACATCAAACTGCCTCTaGAGCAGGGCTAAGCTAGCCATGTCTCCCCACGGAATAACTTGG | + |
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Preference number: 1 (lower is better) Translates to: LCVCPEIRMSTSNCL*SRAKLAMSPHGITW Trigger: CCAAGTTATTCCGTGGGGAGACATGGCTAGCTTAGCCCTGCTGCAGAGGCAGTTTGATGTGGACATTCTTATCTCAGGACACACACACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111729.10 ENSMUST00000154686.2 |
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| 3UTR CCA 90 bp | GCTATTTACAAGGACAACTTCCTAACGTGGCCCTGCACTGTTGGGTaGGCTGCTTCTTATAGAAACCATACACTGCAAACTAAATATATT | + |
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Preference number: 1 (lower is better) Translates to: AIYKDNFLTWPCTVG*AASYRNHTLQTKYI Trigger: AATATATTTAGTTTGCAGTGTATGGTTTCTATAAGAAGCAGCCCACCCAACAGTGCAGGGCCACGTTAGGAAGTTGTCCTTGTAAATAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111729.10 ENSMUST00000118765.8 ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| 3UTR CCA 90 bp | AATAATGTTTGTTTCCAAGGCATTATAGGCCCCAGTGGCAGAACCTaGGTTAATGTAGAATTTATTTTCATGCTCAAATGCTTCAAATTT | + |
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Preference number: 1 (lower is better) Translates to: NNVCFQGIIGPSGRT*VNVEFIFMLKCFKF Trigger: AAATTTGAAGCATTTGAGCATGAAAATAAATTCTACATTAACCCAGGTTCTGCCACTGGGGCCTATAATGCCTTGGAAACAAACATTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111729.10 |
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| 3UTR-3UTR TCA 90 bp | AAGTGCATGCAGTCCATGTCCATCCAAGAACAAGGCCCAGCTCACGCCAGCCTGGTGGATGCTGGGAATTaGACCCCATCCTGGGAAAGC | + |
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Preference number: 2 (lower is better) Translates to: KCMQSMSIQEQGPAHASLVDAGN*TPSWES Trigger: GCTTTCCCAGGATGGGGTTCAATTCCCAGCATCCAC...CAGGCTGGCGTGAGCTGGGCCTTGTTCTTGGATGGACATGGACTGCATGCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR-3UTR GCA 90 bp | AAGTGCATGCAGTCCATGTCCATCCAAGAACAAGGCCCAGCTCACGCCAGCCTGAGATCCACCTGCCTCTaGCTCTTGAGTGCTGAGATT | + |
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Preference number: 2 (lower is better) Translates to: KCMQSMSIQEQGPAHASLRSTCL*LLSAEI Trigger: AATCTCAGCACTCAAGAGGCAGAGGCAGGTGGATCT...CAGGCTGGCGTGAGCTGGGCCTTGTTCTTGGATGGACATGGACTGCATGCACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR-3UTR GCA 90 bp | CCATGTGGATGCTGGGAATTGAACCCCATCCTGGGAAAGCAGGCAGTGCTCTTAGTTAAGAGCACTGGCTaGTCTTCCAGAGGCCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: PCGCWELNPILGKQAVLLVKSTG*SSRGPE Trigger: CTCAGGGCCTCTGGAAGAGCAGCCAGTGCTCTTAAC...TAAGAGCACTGCCTGCTTTCCCAGGATGGGGTTCAATTCCCAGCATCCACATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR-3UTR TCA 90 bp | ATCCCAACACTCAAGAGGCAGAAGTTTGTCTGTGTAGCCCTGTGTGTCCAGGAACCTGCCTCTGCCTCTTaGGTGCTGAGATTTCAAGTC | + |
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Preference number: 2 (lower is better) Translates to: IPTLKRQKFVCVALCVQEPASAS*VLRFQV Trigger: GACTTGAAATCTCAGCACTCAAGAGGCAGAGGCAGG...TTCCTGGACACACAGGGCTACACAGACAAACTTCTGCCTCTTGAGTGTTGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR-3UTR GCA 90 bp | ATCCCAACACTCAAGAGGCAGAAGTTTGTCTGTGTAGCCCTGTGTGTCCAGGAACTTAAGAGATCCACCTaGCTCTGCCTCTTGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: IPTLKRQKFVCVALCVQELKRST*LCLLSA Trigger: AGCACTCAAGAGGCAGAGGCAGGTGGATCTCTTAAG...TTCCTGGACACACAGGGCTACACAGACAAACTTCTGCCTCTTGAGTGTTGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCATGTCTCCCCACGGAATAACTTGGTGTCCGTGGATCAGACCGATCTTGAAAGACCGATCTTGAACTaGCCCACAGTCACAACCTTT | + |
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Preference number: 2 (lower is better) Translates to: SHVSPRNNLVSVDQTDLERPILN*PTVTTF Trigger: AAAGGTTGTGACTGTGGGCCAGTTCAAGATCGGTCT...TTCAAGATCGGTCTGATCCACGGACACCAAGTTATTCCGTGGGGAGACATGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111729.10 ENSMUST00000154686.2 |
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| 3UTR CAA 90 bp | TCCGTGGATCAGACCGATCTTGAACTGGCCCACAGTCACAACCTTTaGTTCTGGGTAATTCAGATTCTCATCGAAGTCTCCTCTCACGAT | + |
|
Preference number: 2 (lower is better) Translates to: SVDQTDLELAHSHNL*FWVIQILIEVSSHD Trigger: ATCGTGAGAGGAGACTTCGATGAGAATCTGAATTACCCAGAACAAAAGGTTGTGACTGTGGGCCAGTTCAAGATCGGTCTGATCCACGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154686.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGGTGGAGACCAGCCTGGCTTTACGACTTTTTATACTCAATTCGTTCTACTTCCCCACGGAATAACTTaGTGTCCGTGGATCAGACCG | + |
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Preference number: 2 (lower is better) Translates to: SGGDQPGFTTFYTQFVLLPHGIT*CPWIRP Trigger: CGGTCTGATCCACGGACACCAAGTTATTCCGTGGGG...AAGTAGAACGAATTGAGTATAAAAAGTCGTAAAGCCAGGCTGGTCTCCACCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111729.10 |
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| 3UTR-3UTR CCA 90 bp | TTGTGTGTGTGTCCTGAGATAAGAATGTCCACATCAAACTGCCTCTGCAGCAGGATAACTTGGTGTCCGTaGATCAGACCGATCTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: LCVCPEIRMSTSNCLCSRITWCP*IRPILN Trigger: GTTCAAGATCGGTCTGATCCACGGACACCAAGTTAT...CCTGCTGCAGAGGCAGTTTGATGTGGACATTCTTATCTCAGGACACACACACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111729.10 ENSMUST00000154686.2 |
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| 3UTR-3UTR GCA 90 bp | CCATGTGGATGCTGGGAATTGAACCCCATCCTGGGAAAGCAGGCAGTGCTCTTAACACAGAATAGTATTTaGAGATCTCACCTTCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: PCGCWELNPILGKQAVLLTQNSI*RSHLQK Trigger: CTTTTGAAGGTGAGATCTGCAAATACTATTCTGTGT...TAAGAGCACTGCCTGCTTTCCCAGGATGGGGTTCAATTCCCAGCATCCACATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR-3UTR CCA 90 bp | ATAGGCCCCAGTGGCAGAACCTGGGTTAATGTAGAATTTATTTTCATGCTCAAAATAACTTGGTGTCCGTaGATCAGACCGATCTTGAAC | + |
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Preference number: 2 (lower is better) Translates to: IGPSGRTWVNVEFIFMLKITWCP*IRPILN Trigger: GTTCAAGATCGGTCTGATCCACGGACACCAAGTTAT...TTTGAGCATGAAAATAAATTCTACATTAACCCAGGTTCTGCCACTGGGGCCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000111729.10 ENSMUST00000154686.2 |
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| 3UTR TCA 72 bp | CTCCTCTCACGATGTGGACGTCGCCAGCCAGAGTCTTaGGATAGTCGTAGCTCTCCTTGGTGCAGAGGTTGC | + |
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Preference number: 3 (lower is better) Translates to: LLSRCGRRQPES*DSRSSPWCRGC Trigger: GCAACCTCTGCACCAAGGAGAGCTACGACTATCTCAAGACTCTGGCTGGCGACGTCCACATCGTGAGAGGAG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154686.2 |
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| 3UTR GCA 72 bp | GATAGTCGTAGCTCTCCTTGGTGCAGAGGTTGCCGGTaGAGAGGATGTGCTGGATTTTTCCTGGCACCAGGA | + |
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Preference number: 3 (lower is better) Translates to: DSRSSPWCRGCR*RGCAGFFLAPG Trigger: TCCTGGTGCCAGGAAAAATCCAGCACATCCTCTGCACCGGCAACCTCTGCACCAAGGAGAGCTACGACTATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154686.2 |
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| 3UTR GCA 72 bp | GTAGACCAGGCTGGCTTTGAACTCAATAGATCCACCTaGCACTGCCTCCCGACAGGGATTAAAGGCGTGCAC | + |
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Preference number: 3 (lower is better) Translates to: VDQAGFELNRST*HCLPTGIKGVH Trigger: GTGCACGCCTTTAATCCCTGTCGGGAGGCAGTGGCAGGTGGATCTATTGAGTTCAAAGCCAGCCTGGTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR CCA 72 bp | AGGGCTAAGCTAGCCATGTCTCCCCACGGAATAACTTaGTGTCCGTGGATCAGACCGATCTTGAACTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: RAKLAMSPHGIT*CPWIRPILNWP Trigger: GGGCCAGTTCAAGATCGGTCTGATCCACGGACACCAAGTTATTCCGTGGGGAGACATGGCTAGCTTAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111729.10 ENSMUST00000154686.2 |
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| 3UTR CCA 72 bp | CTAGCCATGTCTCCCCACGGAATAACTTGGTGTCCGTaGATCAGACCGATCTTGAACTGGCCCACAGTCACA | + |
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Preference number: 3 (lower is better) Translates to: LAMSPHGITWCP*IRPILNWPTVT Trigger: TGTGACTGTGGGCCAGTTCAAGATCGGTCTGATCCACGGACACCAAGTTATTCCGTGGGGAGACATGGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111729.10 ENSMUST00000154686.2 |
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| 3UTR-3UTR CAA 90 bp | CACGGAATAACTTGGTGTCCGTGGATCAGACCGATCTTGAACTGGCCCACAGTCTGGATCAGACCGATCTaGAACTGGCCCACAGTCACA | + |
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Preference number: 3 (lower is better) Translates to: HGITWCPWIRPILNWPTVWIRPI*NWPTVT Trigger: TGTGACTGTGGGCCAGTTCAAGATCGGTCTGATCCA...GACTGTGGGCCAGTTCAAGATCGGTCTGATCCACGGACACCAAGTTATTCCGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111729.10 ENSMUST00000154686.2 |
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| 3UTR TCA 72 bp | ATCCTGGGAAAGCAGGCAGTGCTCTTAAACTGCCACTaGGGCATCTCTCCAGCCCCGAGTCTGGCAAATATA | + |
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Preference number: 3 (lower is better) Translates to: ILGKQAVLLNCH*GISPAPSLANI Trigger: TATATTTGCCAGACTCGGGGCTGGAGAGATGCCTCAGTGGCAGTTTAAGAGCACTGCCTGCTTTCCCAGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR GCA 72 bp | TGTCCTGAGATAAGAATGTCCACATCAAACTGCCTCTaGAGCAGGGCTAAGCTAGCCATGTCTCCCCACGGA | + |
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Preference number: 3 (lower is better) Translates to: CPEIRMSTSNCL*SRAKLAMSPHG Trigger: TCCGTGGGGAGACATGGCTAGCTTAGCCCTGCTGCAGAGGCAGTTTGATGTGGACATTCTTATCTCAGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111729.10 ENSMUST00000154686.2 |
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| 3UTR CCA 72 bp | GCATTGAACACAAAGAGATCTGCCTGCCTCTACCTCTaGAACACTGGGGTTGAATCTGTGCACCACCACACC | + |
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Preference number: 3 (lower is better) Translates to: ALNTKRSACLYL*NTGVESVHHHT Trigger: GGTGTGGTGGTGCACAGATTCAACCCCAGTGTTCCAGAGGTAGAGGCAGGCAGATCTCTTTGTGTTCAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
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| 3UTR-3UTR CAA 90 bp | TTAAGAATCATTGCTGAGGGCTGGAGAGATGACTCAGCCGTTAAGAGCACTGGCGTCTCCTGTGTAGCTTaGGCTGGCCTAGCATTGGCA | + |
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Preference number: 3 (lower is better) Translates to: LRIIAEGWRDDSAVKSTGVSCVA*AGLALA Trigger: TGCCAATGCTAGGCCAGCCAAAGCTACACAGGAGAC...GCCAGTGCTCTTAACGGCTGAGTCATCTCTCCAGCCCTCAGCAATGATTCTTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR-3UTR CAA 90 bp | AATAACTTGGTGTCCGTGGATCAGACCGATCTTGAACTGGCCCACAGTCACAACTGGATCAGACCGATCTaGAACTGGCCCACAGTCACA | + |
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Preference number: 3 (lower is better) Translates to: NNLVSVDQTDLELAHSHNWIRPI*NWPTVT Trigger: TGTGACTGTGGGCCAGTTCAAGATCGGTCTGATCCA...GTTGTGACTGTGGGCCAGTTCAAGATCGGTCTGATCCACGGACACCAAGTTATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111729.10 ENSMUST00000154686.2 |
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| 3UTR-3UTR CAA 90 bp | TTTAATCCCAACACTCAAGAGGCAGAAGTTTGTCTGTGTAGCCCTGTGTGTCCACGTGGCCCTGCACTGTaGGGTGGGCTGCTTCTTATA | + |
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Preference number: 3 (lower is better) Translates to: FNPNTQEAEVCLCSPVCPRGPAL*GGLLLI Trigger: TATAAGAAGCAGCCCACCCAACAGTGCAGGGCCACG...TGGACACACAGGGCTACACAGACAAACTTCTGCCTCTTGAGTGTTGGGATTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR TCA 72 bp | CACACCAAGCTCAGCCATCAGCTAACATCCACATGCTaGGTGCACAGGGAAGAGTGGACCATGTATGGGATA | + |
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Preference number: 3 (lower is better) Translates to: HTKLSHQLTSTC*VHREEWTMYGI Trigger: TATCCCATACATGGTCCACTCTTCCCTGTGCACTCAGCATGTGGATGTTAGCTGATGGCTGAGCTTGGTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR GCA 72 bp | GTAGCACTGCTGGCATTGAACACAAAGAGATCTGCCTaGCTCTACCTCTGGAACACTGGGGTTGAATCTGTG | + |
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Preference number: 3 (lower is better) Translates to: VALLALNTKRSA*LYLWNTGVESV Trigger: CACAGATTCAACCCCAGTGTTCCAGAGGTAGAGGCAGGCAGATCTCTTTGTGTTCAATGCCAGCAGTGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
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| 3UTR TCA 72 bp | GAGATCTGCCTGCCTCTACCTCTGGAACACTGGGGTTaGATCTGTGCACCACCACACCAGCTCTTATTTAAA | + |
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Preference number: 3 (lower is better) Translates to: EICLPLPLEHWG*ICAPPHQLLFK Trigger: TTTAAATAAGAGCTGGTGTGGTGGTGCACAGATTCAACCCCAGTGTTCCAGAGGTAGAGGCAGGCAGATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
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| 3UTR CCA 72 bp | TATGGGGCTGGAGTTATAGACAGTATAGCTGCCATGTaGATGCTGGGAATTGAACCCCATCCTGGGAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: YGAGVIDSIAAM*MLGIEPHPGKA Trigger: TGCTTTCCCAGGATGGGGTTCAATTCCCAGCATCCACATGGCAGCTATACTGTCTATAACTCCAGCCCCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR GCA 72 bp | GAGGCTATTTACAAGGACAACTTCCTAACGTGGCCCTaGACTGTTGGGTGGGCTGCTTCTTATAGAAACCAT | + |
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Preference number: 3 (lower is better) Translates to: EAIYKDNFLTWP*TVGWAASYRNH Trigger: ATGGTTTCTATAAGAAGCAGCCCACCCAACAGTGCAGGGCCACGTTAGGAAGTTGTCCTTGTAAATAGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111729.10 ENSMUST00000118765.8 ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| 3UTR GCA 72 bp | TACACCCCAAAGGAGTCTCAGACACAGGATCATAACTaGTCTAACACATCTGCAGTTGTGTGCCCTTCACTC | + |
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Preference number: 3 (lower is better) Translates to: YTPKESQTQDHN*SNTSAVVCPSL Trigger: GAGTGAAGGGCACACAACTGCAGATGTGTTAGAGCAGTTATGATCCTGTGTCTGAGACTCCTTTGGGGTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR-3UTR CAA 90 bp | TTTAATCCCAACACTCAAGAGGCAGAAGTTTGTCTGTGTAGCCCTGTGTGTCCAACCTGCCTCTGCCTCTaGAGTGCTGAGATTTCAAGT | + |
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Preference number: 3 (lower is better) Translates to: FNPNTQEAEVCLCSPVCPTCLCL*SAEISS Trigger: ACTTGAAATCTCAGCACTCAAGAGGCAGAGGCAGGT...TGGACACACAGGGCTACACAGACAAACTTCTGCCTCTTGAGTGTTGGGATTAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR-3UTR CAA 90 bp | CCATGTGGATGCTGGGAATTGAACCCCATCCTGGGAAAGCAGGCAGTGCTCTTACATCGGCAGTTGCATTaGGCTTCTCATTTTTATGTT | + |
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Preference number: 3 (lower is better) Translates to: PCGCWELNPILGKQAVLLHRQLH*ASHFYV Trigger: AACATAAAAATGAGAAGCCAAATGCAACTGCCGATG...TAAGAGCACTGCCTGCTTTCCCAGGATGGGGTTCAATTCCCAGCATCCACATGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR CCA 72 bp | GATCTTGAACTGGCCCACAGTCACAACCTTTTGTTCTaGGTAATTCAGATTCTCATCGAAGTCTCCTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: DLELAHSHNLLF*VIQILIEVSSH Trigger: GTGAGAGGAGACTTCGATGAGAATCTGAATTACCCAGAACAAAAGGTTGTGACTGTGGGCCAGTTCAAGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154686.2 |
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| 3UTR TCA 72 bp | TCCGTAATGAGATCTGATGCCCTCTTCTGGTGTGTCTaGAGACAGCTACAGTGCACTCACATACATGAAATA | + |
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Preference number: 3 (lower is better) Translates to: SVMRSDALFWCV*RQLQCTHIHEI Trigger: TATTTCATGTATGTGAGTGCACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCAGATCTCATTACGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| 3UTR TCA 72 bp | TTCATGCTCAAATGCTTCAAATTTGTGTGTGTGTCCTaGGATAAGAATGTCCACATCAAACTGCCTCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: FMLKCFKFVCVS*DKNVHIKLPLQ Trigger: CTGCAGAGGCAGTTTGATGTGGACATTCTTATCTCAGGACACACACACAAATTTGAAGCATTTGAGCATGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111729.10 ENSMUST00000154686.2 |
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| 3UTR-3UTR CAA 90 bp | AGTGGTGGAGACCAGCCTGGCTTTACGACTTTTTATACTCAATTCGTTCTACTTCACAGTCACAACCTTTaGTTCTGGGTAATTCAGATT | + |
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Preference number: 3 (lower is better) Translates to: SGGDQPGFTTFYTQFVLLHSHNL*FWVIQI Trigger: AATCTGAATTACCCAGAACAAAAGGTTGTGACTGTG...AAGTAGAACGAATTGAGTATAAAAAGTCGTAAAGCCAGGCTGGTCTCCACCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111729.10 |
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| 3UTR-3UTR CAA 90 bp | GGCATTATAGGCCCCAGTGGCAGAACCTGGGTTAATGTAGAATTTATTTTCATGTCAAATGCTTCAAATTaGTGTGTGTGTCCTGAGATA | + |
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Preference number: 3 (lower is better) Translates to: GIIGPSGRTWVNVEFIFMSNASN*CVCPEI Trigger: TATCTCAGGACACACACACAAATTTGAAGCATTTGA...CATGAAAATAAATTCTACATTAACCCAGGTTCTGCCACTGGGGCCTATAATGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000111729.10 ENSMUST00000154686.2 |
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| 3UTR GCA 72 bp | AAATTATCTTTATTTTATGTGCATTGGTGCTTTGCCTaGATGTCTGTCTGTGTAAAGGTCCTGGAACTTATG | + |
|
Preference number: 3 (lower is better) Translates to: KLSLFYVHWCFA*MSVCVKVLELM Trigger: CATAAGTTCCAGGACCTTTACACAGACAGACATGCAGGCAAAGCACCAATGCACATAAAATAAAGATAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
||
| CDS-3UTR TCA 90 bp | CTGCCTGCCTCTACCTCTGGAACACTGGGGTTGAATCTGTGCACCACCACACCACGCCAGCCAGAGTCTTaGGATAGTCGTAGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LPASTSGTLGLNLCTTTPRQPES*DSRSSP Trigger: AGGAGAGCTACGACTATCTCAAGACTCTGGCTGGCG...TGGTGTGGTGGTGCACAGATTCAACCCCAGTGTTCCAGAGGTAGAGGCAGGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
||
| CDS-3UTR TCA 90 bp | GGCCCTGAGTTCAATCCCCAGCAACCACATGGTGGCTCACAACCATCCGTAATGCGCCAGCCAGAGTCTTaGGATAGTCGTAGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GPEFNPQQPHGGSQPSVMRQPES*DSRSSP Trigger: AGGAGAGCTACGACTATCTCAAGACTCTGGCTGGCG...CATTACGGATGGTTGTGAGCCACCATGTGGTTGCTGGGGATTGAACTCAGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
||
| CDS-3UTR GCA 90 bp | AGATCTGCCTGCCTCTACCTCTGGAACACTGGGGTTGAATCTGTGCACCACCACCCGGTGCAGAGGATGTaGTGGATTTTTCCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RSACLYLWNTGVESVHHHPVQRM*WIFPGT Trigger: GGTGCCAGGAAAAATCCAGCACATCCTCTGCACCGG...GTGGTGGTGCACAGATTCAACCCCAGTGTTCCAGAGGTAGAGGCAGGCAGATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGTCTTGAGATAGTCGTAGCTCTCCTTGGTGCAGAGGTTGCCGGTGCAGAGAGGCTGTTGCACCGGTaGGGAATGTGCAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSLEIVVALLGAEVAGAERLLHR*GMCRSP Trigger: AGGAGATCTGCACATTCCGCACCGGTGCAACAGCCT...CTCTGCACCGGCAACCTCTGCACCAAGGAGAGCTACGACTATCTCAAGACTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154686.2 |
||
| CDS-3UTR CCA 90 bp | GATCTGCCTGCCTCTACCTCTGGAACACTGGGGTTGAATCTGTGCACCACCACACCCCACGGAATAACTTaGTGTCCGTGGATCAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: DLPASTSGTLGLNLCTTTPHGIT*CPWIRP Trigger: CGGTCTGATCCACGGACACCAAGTTATTCCGTGGGG...TGTGGTGGTGCACAGATTCAACCCCAGTGTTCCAGAGGTAGAGGCAGGCAGATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGAATTGAACCCCATCCTGGGAAAGCAGGCAGTGCTCTTAAACTGCCACTGAGGCTGTTGCACCGGTaGGGAATGTGCAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGIEPHPGKAGSALKLPLRLLHR*GMCRSP Trigger: AGGAGATCTGCACATTCCGCACCGGTGCAACAGCCT...CAGTGGCAGTTTAAGAGCACTGCCTGCTTTCCCAGGATGGGGTTCAATTCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCCTGCCTCTACCTCTGGAACACTGGGGTTGAATCTGTGCACCACCACACCATGTCCACATCAAACTaGCTCTGCAGCAGGGCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: SACLYLWNTGVESVHHHTMSTSN*LCSRAK Trigger: CTTAGCCCTGCTGCAGAGGCAGTTTGATGTGGACAT...GGTGTGGTGGTGCACAGATTCAACCCCAGTGTTCCAGAGGTAGAGGCAGGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
||
| CDS-3UTR CCA 90 bp | AGATCTGCCTGCCTCTACCTCTGGAACACTGGGGTTGAATCTGTGCACCACCACGTGCAGAGGATGTGCTaGATTTTTCCTGGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSACLYLWNTGVESVHHHVQRMC*IFPGTR Trigger: CCTGGTGCCAGGAAAAATCCAGCACATCCTCTGCAC...GTGGTGGTGCACAGATTCAACCCCAGTGTTCCAGAGGTAGAGGCAGGCAGATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
||
| CDS-3UTR GCA 90 bp | CCATGTGGATGCTGGGAATTGAACCCCATCCTGGGAAAGCAGGCAGTGCTCTTAACATCAAACTGCCTCTaGAGCAGGGCTAAGCTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PCGCWELNPILGKQAVLLTSNCL*SRAKLA Trigger: GGCTAGCTTAGCCCTGCTGCAGAGGCAGTTTGATGT...TAAGAGCACTGCCTGCTTTCCCAGGATGGGGTTCAATTCCCAGCATCCACATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
||
| CDS-3UTR CCA 90 bp | ATTGAACCCCATCCTGGGAAAGCAGGCAGTGCTCTTAAACTGCCACTGAGGCATCCCCACGGAATAACTTaGTGTCCGTGGATCAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: IEPHPGKAGSALKLPLRHPHGIT*CPWIRP Trigger: CGGTCTGATCCACGGACACCAAGTTATTCCGTGGGG...ATGCCTCAGTGGCAGTTTAAGAGCACTGCCTGCTTTCCCAGGATGGGGTTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
||
| CDS-3UTR TCA 90 bp | AATAACTTGGTGTCCGTGGATCAGACCGATCTTGAACTGGCCCACAGTCACAACCGCCAGCCAGAGTCTTaGGATAGTCGTAGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NNLVSVDQTDLELAHSHNRQPES*DSRSSP Trigger: AGGAGAGCTACGACTATCTCAAGACTCTGGCTGGCG...GTTGTGACTGTGGGCCAGTTCAAGATCGGTCTGATCCACGGACACCAAGTTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111729.10 |
||
| CDS-3UTR CCA 90 bp | ACAGGATCTCACTATGTAGCACTGCTGGCATTGAACACAAAGAGATCTGCCTGCTCTCCTCTCACGATGTaGACGTCGCCAGCCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TGSHYVALLALNTKRSACSPLTM*TSPARV Trigger: GACTCTGGCTGGCGACGTCCACATCGTGAGAGGAGA...GCAGGCAGATCTCTTTGTGTTCAATGCCAGCAGTGCTACATAGTGAGATCCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGATCTCACTATGTAGCACTGCTGGCATTGAACACAAAGAGATCTGCCTGCAGGCTGTTGCACCGGTaGGGAATGTGCAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TGSHYVALLALNTKRSACRLLHR*GMCRSP Trigger: AGGAGATCTGCACATTCCGCACCGGTGCAACAGCCT...GCAGGCAGATCTCTTTGTGTTCAATGCCAGCAGTGCTACATAGTGAGATCCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
||
| CDS-3UTR GCA 90 bp | GCATTGAACACAAAGAGATCTGCCTGCCTCTACCTCTGGAACACTGGGGTTGAAACATCAAACTGCCTCTaGAGCAGGGCTAAGCTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALNTKRSACLYLWNTGVETSNCL*SRAKLA Trigger: GGCTAGCTTAGCCCTGCTGCAGAGGCAGTTTGATGT...TTCAACCCCAGTGTTCCAGAGGTAGAGGCAGGCAGATCTCTTTGTGTTCAATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
||
| CDS-3UTR CCA 90 bp | GAGATAAGAATGTCCACATCAAACTGCCTCTGCAGCAGGGCTAAGCTAGCCATGGTGCAGAGGATGTGCTaGATTTTTCCTGGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EIRMSTSNCLCSRAKLAMVQRMC*IFPGTR Trigger: CCTGGTGCCAGGAAAAATCCAGCACATCCTCTGCAC...CATGGCTAGCTTAGCCCTGCTGCAGAGGCAGTTTGATGTGGACATTCTTATCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111729.10 |
||
| CDS-3UTR CCA 90 bp | TTTAATCCCAACACTCAAGAGGCAGAAGTTTGTCTGTGTAGCCCTGTGTGTCCATCTCCTCTCACGATGTaGACGTCGCCAGCCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FNPNTQEAEVCLCSPVCPSPLTM*TSPARV Trigger: GACTCTGGCTGGCGACGTCCACATCGTGAGAGGAGA...TGGACACACAGGGCTACACAGACAAACTTCTGCCTCTTGAGTGTTGGGATTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
||
| 3UTR CAA 72 bp | CACGGAATAACTTGGTGTCCGTGGATCAGACCGATCTaGAACTGGCCCACAGTCACAACCTTTTGTTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HGITWCPWIRPI*NWPTVTTFCSG Trigger: CCCAGAACAAAAGGTTGTGACTGTGGGCCAGTTCAAGATCGGTCTGATCCACGGACACCAAGTTATTCCGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111729.10 ENSMUST00000154686.2 |
||
| CDS-3UTR TCA 90 bp | GATCTGCCTGCCTCTACCTCTGGAACACTGGGGTTGAATCTGTGCACCACCACATTTGTGTGTGTGTCCTaGGATAAGAATGTCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: DLPASTSGTLGLNLCTTTFVCVS*DKNVHI Trigger: GATGTGGACATTCTTATCTCAGGACACACACACAAA...TGTGGTGGTGCACAGATTCAACCCCAGTGTTCCAGAGGTAGAGGCAGGCAGATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
||
| CDS-3UTR GCA 90 bp | ACAGGATCTCACTATGTAGCACTGCTGGCATTGAACACAAAGAGATCTGCCTGCTGCAGAGGTTGCCGGTaGAGAGGATGTGCTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: TGSHYVALLALNTKRSACCRGCR*RGCAGF Trigger: AAATCCAGCACATCCTCTGCACCGGCAACCTCTGCA...GCAGGCAGATCTCTTTGTGTTCAATGCCAGCAGTGCTACATAGTGAGATCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
||
| CDS-3UTR CCA 90 bp | CCATGTGGATGCTGGGAATTGAACCCCATCCTGGGAAAGCAGGCAGTGCTCTTAATAACTTGGTGTCCGTaGATCAGACCGATCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PCGCWELNPILGKQAVLLITWCP*IRPILN Trigger: GTTCAAGATCGGTCTGATCCACGGACACCAAGTTAT...TAAGAGCACTGCCTGCTTTCCCAGGATGGGGTTCAATTCCCAGCATCCACATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCACTGTTGGGTGGGCTGCTTCTTATAGAAACCATACACTGCAAACTAAATCCGGTGCAGAGGATGTaGTGGATTTTTCCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: PALLGGLLLIETIHCKLNPVQRM*WIFPGT Trigger: GGTGCCAGGAAAAATCCAGCACATCCTCTGCACCGG...ATTTAGTTTGCAGTGTATGGTTTCTATAAGAAGCAGCCCACCCAACAGTGCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000111729.10 ENSMUST00000118765.8 ENSMUST00000118830.8 ENSMUST00000155671.8 |
||
| CDS-3UTR CCA 90 bp | AGATCTGCCTGCCTCTACCTCTGGAACACTGGGGTTGAATCTGTGCACCACCACCCCAGTGGCAGAACCTaGGTTAATGTAGAATTTATT | + |
|
Preference number: 4 (lower is better) Translates to: RSACLYLWNTGVESVHHHPSGRT*VNVEFI Trigger: AATAAATTCTACATTAACCCAGGTTCTGCCACTGGG...GTGGTGGTGCACAGATTCAACCCCAGTGTTCCAGAGGTAGAGGCAGGCAGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
||
| 3UTR CAA 72 bp | AGACACAGGATCATAACTGCTCTAACACATCTGCAGTaGTGTGCCCTTCACTCTAGCACATCGGCAGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: RHRIITALTHLQ*CALHSSTSAVA Trigger: TGCAACTGCCGATGTGCTAGAGTGAAGGGCACACAACTGCAGATGTGTTAGAGCAGTTATGATCCTGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
||
| CDS-3UTR TCA 90 bp | TGGTGGAGACCAGCCTGGCTTTACGACTTTTTATACTCAATTCGTTCTACTTTGCGCCAGCCAGAGTCTTaGGATAGTCGTAGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WWRPAWLYDFLYSIRSTLRQPES*DSRSSP Trigger: AGGAGAGCTACGACTATCTCAAGACTCTGGCTGGCG...CAAAGTAGAACGAATTGAGTATAAAAAGTCGTAAAGCCAGGCTGGTCTCCACCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111729.10 ENSMUST00000118765.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAGACCAGCCTGGCTTTACGACTTTTTATACTCAATTCGTTCTACTTTGACAGGCTGTTGCACCGGTaGGGAATGTGCAGATCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VETSLALRLFILNSFYFDRLLHR*GMCRSP Trigger: TGGAGATCTGCACATTCCGCACCGGTGCAACAGCCT...GTCAAAGTAGAACGAATTGAGTATAAAAAGTCGTAAAGCCAGGCTGGTCTCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111729.10 |
||
| CDS-3UTR GCA 90 bp | GATCTTGAACTGGCCCACAGTCACAACCTTTTGTTCTGGGTAATTCAGATTCTCTGCAGAGGTTGCCGGTaGAGAGGATGTGCTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: DLELAHSHNLLFWVIQILCRGCR*RGCAGF Trigger: AAATCCAGCACATCCTCTGCACCGGCAACCTCTGCA...GAGAATCTGAATTACCCAGAACAAAAGGTTGTGACTGTGGGCCAGTTCAAGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111729.10 |
||
| CDS-3UTR GCA 90 bp | CCTGCACTGTTGGGTGGGCTGCTTCTTATAGAAACCATACACTGCAAACTAAATTGCAGAGGTTGCCGGTaGAGAGGATGTGCTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: PALLGGLLLIETIHCKLNCRGCR*RGCAGF Trigger: AAATCCAGCACATCCTCTGCACCGGCAACCTCTGCA...ATTTAGTTTGCAGTGTATGGTTTCTATAAGAAGCAGCCCACCCAACAGTGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000111729.10 ENSMUST00000118765.8 ENSMUST00000118830.8 ENSMUST00000155671.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCACTGTTGGGTGGGCTGCTTCTTATAGAAACCATACACTGCAAACTAAATACATCAAACTGCCTCTaGAGCAGGGCTAAGCTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PALLGGLLLIETIHCKLNTSNCL*SRAKLA Trigger: GGCTAGCTTAGCCCTGCTGCAGAGGCAGTTTGATGT...ATTTAGTTTGCAGTGTATGGTTTCTATAAGAAGCAGCCCACCCAACAGTGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118830.8 ENSMUST00000155671.8 |
||
| CDS-3UTR CCA 90 bp | GTGGAGACCAGCCTGGCTTTACGACTTTTTATACTCAATTCGTTCTACTTTGACGTGCAGAGGATGTGCTaGATTTTTCCTGGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VETSLALRLFILNSFYFDVQRMC*IFPGTR Trigger: CCTGGTGCCAGGAAAAATCCAGCACATCCTCTGCAC...GTCAAAGTAGAACGAATTGAGTATAAAAAGTCGTAAAGCCAGGCTGGTCTCCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111729.10 ENSMUST00000118765.8 |
||
| CDS-3UTR CCA 90 bp | ATCTCACTATGTAGCACTGCTGGCATTGAACACAAAGAGATCTGCCTGCCTCTAAGACCGATCTTGAACTaGCCCACAGTCACAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ISLCSTAGIEHKEICLPLRPILN*PTVTTF Trigger: AAAGGTTGTGACTGTGGGCCAGTTCAAGATCGGTCT...TAGAGGCAGGCAGATCTCTTTGTGTTCAATGCCAGCAGTGCTACATAGTGAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
||
| 3UTR CAA 72 bp | CAGACCGATCTTGAACTGGCCCACAGTCACAACCTTTaGTTCTGGGTAATTCAGATTCTCATCGAAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTDLELAHSHNL*FWVIQILIEVS Trigger: GGAGACTTCGATGAGAATCTGAATTACCCAGAACAAAAGGTTGTGACTGTGGGCCAGTTCAAGATCGGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111729.10 ENSMUST00000154686.2 |
||
| CDS-3UTR TCA 90 bp | TACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGTCCCGCCAGCCAGAGTCTTaGGATAGTCGTAGCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YTQSLDSFSSCASFVMKSRQPES*DSRSSP Trigger: AGGAGAGCTACGACTATCTCAAGACTCTGGCTGGCG...GGACTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118765.8 ENSMUST00000118830.8 ENSMUST00000155671.8 |
||
| CDS-3UTR CCA 90 bp | CTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGTCCAAATACCAACTATCTCCTCTCACGATGTaGACGTCGCCAGCCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LDSFSSCASFVMKSKYQLSPLTM*TSPARV Trigger: GACTCTGGCTGGCGACGTCCACATCGTGAGAGGAGA...TAGTTGGTATTTGGACTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118765.8 ENSMUST00000118830.8 ENSMUST00000155671.8 |
||
| CDS-3UTR CCA 90 bp | CCTGCACTGTTGGGTGGGCTGCTTCTTATAGAAACCATACACTGCAAACTAAATAGACCGATCTTGAACTaGCCCACAGTCACAACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PALLGGLLLIETIHCKLNRPILN*PTVTTF Trigger: AAAGGTTGTGACTGTGGGCCAGTTCAAGATCGGTCT...ATTTAGTTTGCAGTGTATGGTTTCTATAAGAAGCAGCCCACCCAACAGTGCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118830.8 ENSMUST00000155671.8 |
||
| CDS-3UTR CCA 90 bp | ATCTCACTATGTAGCACTGCTGGCATTGAACACAAAGAGATCTGCCTGCCTCTAATAACTTGGTGTCCGTaGATCAGACCGATCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ISLCSTAGIEHKEICLPLITWCP*IRPILN Trigger: GTTCAAGATCGGTCTGATCCACGGACACCAAGTTAT...TAGAGGCAGGCAGATCTCTTTGTGTTCAATGCCAGCAGTGCTACATAGTGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
||
| CDS-3UTR GCA 90 bp | CTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGTCCAAATACCAACTACCGGTGCAGAGGATGTaGTGGATTTTTCCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: LDSFSSCASFVMKSKYQLPVQRM*WIFPGT Trigger: GGTGCCAGGAAAAATCCAGCACATCCTCTGCACCGG...TAGTTGGTATTTGGACTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118765.8 ENSMUST00000118830.8 ENSMUST00000155671.8 |
||
| CDS-3UTR GCA 90 bp | ACATACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGAGGCTGTTGCACCGGTaGGGAATGTGCAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TYTQSLDSFSSCASFVMKRLLHR*GMCRSP Trigger: AGGAGATCTGCACATTCCGCACCGGTGCAACAGCCT...CTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118765.8 ENSMUST00000118830.8 ENSMUST00000155671.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAGAAAACATACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTAGGCTGTTGCACCGGTaGGGAATGTGCAGATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EEKTYTQSLDSFSSCASFRLLHR*GMCRSP Trigger: AGGAGATCTGCACATTCCGCACCGGTGCAACAGCCT...AAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTATGTTTTCTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118765.8 ENSMUST00000118830.8 ENSMUST00000155671.8 |
||
| CDS-3UTR CCA 90 bp | TACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGTCCGTGCAGAGGATGTGCTaGATTTTTCCTGGCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: YTQSLDSFSSCASFVMKSVQRMC*IFPGTR Trigger: CCTGGTGCCAGGAAAAATCCAGCACATCCTCTGCAC...GGACTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118765.8 ENSMUST00000118830.8 ENSMUST00000155671.8 |
||
| CDS-3UTR CCA 90 bp | AAAACATACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGTCTCCTCTCACGATGTaGACGTCGCCAGCCAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KTYTQSLDSFSSCASFVMSPLTM*TSPARV Trigger: GACTCTGGCTGGCGACGTCCACATCGTGAGAGGAGA...CATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTATGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000118765.8 ENSMUST00000118830.8 ENSMUST00000155671.8 |
||
| CDS-3UTR CCA 90 bp | ACATACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGCCCCACGGAATAACTTaGTGTCCGTGGATCAGACCG | + |
|
Preference number: 4 (lower is better) Translates to: TYTQSLDSFSSCASFVMKPHGIT*CPWIRP Trigger: CGGTCTGATCCACGGACACCAAGTTATTCCGTGGGG...CTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118830.8 ENSMUST00000155671.8 |
||
| CDS-3UTR TCA 90 bp | GGCATAGTGATATACACCTTTAATCCTAGTGCTTGGGAGGCAAAGACAGACACATTTGTGTGTGTGTCCTaGGATAAGAATGTCCACATC | + |
|
Preference number: 4 (lower is better) Translates to: GIVIYTFNPSAWEAKTDTFVCVS*DKNVHI Trigger: GATGTGGACATTCTTATCTCAGGACACACACACAAA...TGTGTCTGTCTTTGCCTCCCAAGCACTAGGATTAAAGGTGTATATCACTATGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
||
| CDS-3UTR GCA 90 bp | AAAACATACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGCCGGTGCAGAGGATGTaGTGGATTTTTCCTGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: KTYTQSLDSFSSCASFVMPVQRM*WIFPGT Trigger: GGTGCCAGGAAAAATCCAGCACATCCTCTGCACCGG...CATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTATGTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000118765.8 ENSMUST00000118830.8 ENSMUST00000155671.8 |
||
| CDS-3UTR GCA 90 bp | GAAGAGAAAACATACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTTGCAGAGGTTGCCGGTaGAGAGGATGTGCTGGATTT | + |
|
Preference number: 4 (lower is better) Translates to: EEKTYTQSLDSFSSCASFCRGCR*RGCAGF Trigger: AAATCCAGCACATCCTCTGCACCGGCAACCTCTGCA...AAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTATGTTTTCTCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118765.8 ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS-3UTR CCA 90 bp | CAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGTCCAAATACGTGCAGAGGATGTGCTaGATTTTTCCTGGCACCAGG | + |
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Preference number: 4 (lower is better) Translates to: QSLDSFSSCASFVMKSKYVQRMC*IFPGTR Trigger: CCTGGTGCCAGGAAAAATCCAGCACATCCTCTGCAC...GTATTTGGACTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118765.8 ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS-3UTR GCA 90 bp | ACATACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGATGTCCACATCAAACTaGCTCTGCAGCAGGGCTAAG | + |
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Preference number: 4 (lower is better) Translates to: TYTQSLDSFSSCASFVMKMSTSN*LCSRAK Trigger: CTTAGCCCTGCTGCAGAGGCAGTTTGATGTGGACAT...CTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS-3UTR GCA 90 bp | CAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGTCCAAATACATGTCCACATCAAACTaGCTCTGCAGCAGGGCTAAG | + |
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Preference number: 4 (lower is better) Translates to: QSLDSFSSCASFVMKSKYMSTSN*LCSRAK Trigger: CTTAGCCCTGCTGCAGAGGCAGTTTGATGTGGACAT...GTATTTGGACTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS-3UTR CCA 90 bp | CAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGTCCAAATACAGACCGATCTTGAACTaGCCCACAGTCACAACCTTT | + |
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Preference number: 4 (lower is better) Translates to: QSLDSFSSCASFVMKSKYRPILN*PTVTTF Trigger: AAAGGTTGTGACTGTGGGCCAGTTCAAGATCGGTCT...GTATTTGGACTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS-3UTR TCA 90 bp | TACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGTCCTTTGTGTGTGTGTCCTaGGATAAGAATGTCCACATC | + |
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Preference number: 4 (lower is better) Translates to: YTQSLDSFSSCASFVMKSFVCVS*DKNVHI Trigger: GATGTGGACATTCTTATCTCAGGACACACACACAAA...GGACTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS-3UTR CCA 90 bp | GAGAAAACATACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATAACTTGGTGTCCGTaGATCAGACCGATCTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: EKTYTQSLDSFSSCASFVITWCP*IRPILN Trigger: GTTCAAGATCGGTCTGATCCACGGACACCAAGTTAT...TACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTATGTTTTCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS-3UTR CCA 90 bp | GAAGAGAAAACATACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTCCCAGTGGCAGAACCTaGGTTAATGTAGAATTTATT | + |
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Preference number: 4 (lower is better) Translates to: EEKTYTQSLDSFSSCASFPSGRT*VNVEFI Trigger: AATAAATTCTACATTAACCCAGGTTCTGCCACTGGG...AAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTATGTTTTCTCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS-3UTR CCA 90 bp | CTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGTCCAAATACCAACTACCCAGTGGCAGAACCTaGGTTAATGTAGAATTTATT | + |
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Preference number: 4 (lower is better) Translates to: LDSFSSCASFVMKSKYQLPSGRT*VNVEFI Trigger: AATAAATTCTACATTAACCCAGGTTCTGCCACTGGG...TAGTTGGTATTTGGACTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS-3UTR CCA 90 bp | ACATACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGCATCAGCACAAACGATaGAATAATGTTTCTCATCGA | + |
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Preference number: 4 (lower is better) Translates to: TYTQSLDSFSSCASFVMKHQHKR*NNVSHR Trigger: TCGATGAGAAACATTATTCCATCGTTTGTGCTGATG...CTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118765.8 |
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| CDS-3UTR CCA 90 bp | CAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGTCCAAATACCATCAGCACAAACGATaGAATAATGTTTGTTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: QSLDSFSSCASFVMKSKYHQHKR*NNVCFQ Trigger: TTGGAAACAAACATTATTCCATCGTTTGTGCTGATG...GTATTTGGACTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS-3UTR CCA 90 bp | AAAACATACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGCATCAGCACAAACGATaGAATAATGTTTGTTTCCAA | + |
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Preference number: 4 (lower is better) Translates to: KTYTQSLDSFSSCASFVMHQHKR*NNVCFQ Trigger: TTGGAAACAAACATTATTCCATCGTTTGTGCTGATG...CATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTATGTTTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS-3UTR CAA 90 bp | AAGCTAGCCATGTCTCCCCACGGAATAACTTGGTGTCCGTGGATCAGACCGATCTCCTTGGTGCAGAGGTaGCCGGTGCAGAGGATGTGC | + |
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Preference number: 5 (lower is better) Translates to: KLAMSPHGITWCPWIRPISLVQR*PVQRMC Trigger: GCACATCCTCTGCACCGGCAACCTCTGCACCAAGGA...GATCGGTCTGATCCACGGACACCAAGTTATTCCGTGGGGAGACATGGCTAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111729.10 |
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| CDS-3UTR CAA 90 bp | GCATTGAACACAAAGAGATCTGCCTGCCTCTACCTCTGGAACACTGGGGTTGAATCCTTGGTGCAGAGGTaGCCGGTGCAGAGGATGTGC | + |
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Preference number: 5 (lower is better) Translates to: ALNTKRSACLYLWNTGVESLVQR*PVQRMC Trigger: GCACATCCTCTGCACCGGCAACCTCTGCACCAAGGA...TTCAACCCCAGTGTTCCAGAGGTAGAGGCAGGCAGATCTCTTTGTGTTCAATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
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| CDS-3UTR CAA 90 bp | TTAAGAATCATTGCTGAGGGCTGGAGAGATGACTCAGCCGTTAAGAGCACTGGCTCCTTGGTGCAGAGGTaGCCGGTGCAGAGGATGTGC | + |
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Preference number: 5 (lower is better) Translates to: LRIIAEGWRDDSAVKSTGSLVQR*PVQRMC Trigger: GCACATCCTCTGCACCGGCAACCTCTGCACCAAGGA...GCCAGTGCTCTTAACGGCTGAGTCATCTCTCCAGCCCTCAGCAATGATTCTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| CDS-3UTR CAA 90 bp | AGAGATCTGCCTGCCTCTACCTCTGGAACACTGGGGTTGAATCTGTGCACCACCTGGATCAGACCGATCTaGAACTGGCCCACAGTCACA | + |
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Preference number: 5 (lower is better) Translates to: RDLPASTSGTLGLNLCTTWIRPI*NWPTVT Trigger: TGTGACTGTGGGCCAGTTCAAGATCGGTCTGATCCA...GGTGGTGCACAGATTCAACCCCAGTGTTCCAGAGGTAGAGGCAGGCAGATCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
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| CDS-3UTR CAA 90 bp | GCATTGAACACAAAGAGATCTGCCTGCCTCTACCTCTGGAACACTGGGGTTGAATCCCCACGGAATAACTaGGTGTCCGTGGATCAGACC | + |
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Preference number: 5 (lower is better) Translates to: ALNTKRSACLYLWNTGVESPRNN*VSVDQT Trigger: GGTCTGATCCACGGACACCAAGTTATTCCGTGGGGA...TTCAACCCCAGTGTTCCAGAGGTAGAGGCAGGCAGATCTCTTTGTGTTCAATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
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| CDS-3UTR CAA 90 bp | AGACACAGGATCATAACTGCTCTAACACATCTGCAGTTGTGTGCCCTTCACTCTTGGATCAGACCGATCTaGAACTGGCCCACAGTCACA | + |
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Preference number: 5 (lower is better) Translates to: RHRIITALTHLQLCALHSWIRPI*NWPTVT Trigger: TGTGACTGTGGGCCAGTTCAAGATCGGTCTGATCCA...AGAGTGAAGGGCACACAACTGCAGATGTGTTAGAGCAGTTATGATCCTGTGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| CDS-3UTR CAA 90 bp | AAGTGCATGCAGTCCATGTCCATCCAAGAACAAGGCCCAGCTCACGCCAGCCTGTCAAATGCTTCAAATTaGTGTGTGTGTCCTGAGATA | + |
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Preference number: 5 (lower is better) Translates to: KCMQSMSIQEQGPAHASLSNASN*CVCPEI Trigger: TATCTCAGGACACACACACAAATTTGAAGCATTTGA...CAGGCTGGCGTGAGCTGGGCCTTGTTCTTGGATGGACATGGACTGCATGCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| CDS-3UTR CAA 90 bp | GAAGAGAAAACATACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTTCCTTGGTGCAGAGGTaGCCGGTGCAGAGGATGTGC | + |
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Preference number: 5 (lower is better) Translates to: EEKTYTQSLDSFSSCASFSLVQR*PVQRMC Trigger: GCACATCCTCTGCACCGGCAACCTCTGCACCAAGGA...AAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTATGTTTTCTCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000118765.8 ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS-3UTR CAA 90 bp | ACATACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGTCCTTGGTGCAGAGGTaGCCGGTGCAGAGGATGTGC | + |
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Preference number: 5 (lower is better) Translates to: TYTQSLDSFSSCASFVMKSLVQR*PVQRMC Trigger: GCACATCCTCTGCACCGGCAACCTCTGCACCAAGGA...CTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000118765.8 ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS-3UTR CAA 90 bp | GCATTGAACACAAAGAGATCTGCCTGCCTCTACCTCTGGAACACTGGGGTTGAACACAGTCACAACCTTTaGTTCTGGGTAATTCAGATT | + |
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Preference number: 5 (lower is better) Translates to: ALNTKRSACLYLWNTGVEHSHNL*FWVIQI Trigger: AATCTGAATTACCCAGAACAAAAGGTTGTGACTGTG...TTCAACCCCAGTGTTCCAGAGGTAGAGGCAGGCAGATCTCTTTGTGTTCAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
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| CDS-3UTR CAA 90 bp | TTAAGAATCATTGCTGAGGGCTGGAGAGATGACTCAGCCGTTAAGAGCACTGGCCACAGTCACAACCTTTaGTTCTGGGTAATTCAGATT | + |
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Preference number: 5 (lower is better) Translates to: LRIIAEGWRDDSAVKSTGHSHNL*FWVIQI Trigger: AATCTGAATTACCCAGAACAAAAGGTTGTGACTGTG...GCCAGTGCTCTTAACGGCTGAGTCATCTCTCCAGCCCTCAGCAATGATTCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| CDS-3UTR CAA 90 bp | CTGGCATTGAACACAAAGAGATCTGCCTGCCTCTACCTCTGGAACACTGGGGTTTCAAATGCTTCAAATTaGTGTGTGTGTCCTGAGATA | + |
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Preference number: 5 (lower is better) Translates to: LALNTKRSACLYLWNTGVSNASN*CVCPEI Trigger: TATCTCAGGACACACACACAAATTTGAAGCATTTGA...AACCCCAGTGTTCCAGAGGTAGAGGCAGGCAGATCTCTTTGTGTTCAATGCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000117868.8 |
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| CDS-3UTR CAA 90 bp | CAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGTCCAAATACTCCCCACGGAATAACTaGGTGTCCGTGGATCAGACC | + |
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Preference number: 5 (lower is better) Translates to: QSLDSFSSCASFVMKSKYSPRNN*VSVDQT Trigger: GGTCTGATCCACGGACACCAAGTTATTCCGTGGGGA...GTATTTGGACTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS-3UTR CAA 90 bp | CTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGTCCAAATACCAACTATGGATCAGACCGATCTaGAACTGGCCCACAGTCACA | + |
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Preference number: 5 (lower is better) Translates to: LDSFSSCASFVMKSKYQLWIRPI*NWPTVT Trigger: TGTGACTGTGGGCCAGTTCAAGATCGGTCTGATCCA...TAGTTGGTATTTGGACTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS-3UTR CAA 90 bp | AACCAGGAAACTGGAAAATATTTACACAGAATAGTATTTGCAGATCTCACCTTCTCCCCACGGAATAACTaGGTGTCCGTGGATCAGACC | + |
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Preference number: 5 (lower is better) Translates to: NQETGKYLHRIVFADLTFSPRNN*VSVDQT Trigger: GGTCTGATCCACGGACACCAAGTTATTCCGTGGGGA...GAAGGTGAGATCTGCAAATACTATTCTGTGTAAATATTTTCCAGTTTCCTGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| CDS-3UTR CAA 90 bp | TTTAATCCCAACACTCAAGAGGCAGAAGTTTGTCTGTGTAGCCCTGTGTGTCCATCAATTCGTTCTACTTaGACGTCATCTCCAATTAGT | + |
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Preference number: 5 (lower is better) Translates to: FNPNTQEAEVCLCSPVCPSIRST*TSSPIS Trigger: ACTAATTGGAGATGACGTCAAAGTAGAACGAATTGA...TGGACACACAGGGCTACACAGACAAACTTCTGCCTCTTGAGTGTTGGGATTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000155671.8 |
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| CDS-3UTR CAA 90 bp | GAGAAAACATACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTACACAGTCACAACCTTTaGTTCTGGGTAATTCAGATT | + |
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Preference number: 5 (lower is better) Translates to: EKTYTQSLDSFSSCASFVHSHNL*FWVIQI Trigger: AATCTGAATTACCCAGAACAAAAGGTTGTGACTGTG...TACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTATGTTTTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS-3UTR CAA 90 bp | ACATACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGAAGTCAAATGCTTCAAATTaGTGTGTGTGTCCTGAGATA | + |
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Preference number: 5 (lower is better) Translates to: TYTQSLDSFSSCASFVMKSNASN*CVCPEI Trigger: TATCTCAGGACACACACACAAATTTGAAGCATTTGA...CTTCATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS-3UTR CAA 90 bp | AAAACATACACACAAAGTCTGGATTCTTTCTCTTCATGCGCTAGTTTTGTAATGTCAATTCGTTCTACTTaGACGTCATCTCCAATTAGT | + |
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Preference number: 5 (lower is better) Translates to: KTYTQSLDSFSSCASFVMSIRST*TSSPIS Trigger: ACTAATTGGAGATGACGTCAAAGTAGAACGAATTGA...CATTACAAAACTAGCGCATGAAGAGAAAGAATCCAGACTTTGTGTGTATGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118830.8 ENSMUST00000155671.8 |
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| CDS GCA 72 bp | AACTTGGCCGGCAGGCTGTTGCACCGGTGCGGAATGTaGAGATCTCCTAGTACCAACACCAACCGGGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: NLAGRLLHRCGM*RSPSTNTNRVA Trigger: TGCTACCCGGTTGGTGTTGGTACTAGGAGATCTGCACATTCCGCACCGGTGCAACAGCCTGCCGGCCAAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145821.2 |
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| CDS GCA 72 bp | AACTTGGCCGGCAGGCTGTTGCACCGGTGCGGAATGTaGAGATCTCCTAGTACCAACACCAATCTGTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: NLAGRLLHRCGM*RSPSTNTNLCP Trigger: TGGGCACAGATTGGTGTTGGTACTAGGAGATCTGCACATTCCGCACCGGTGCAACAGCCTGCCGGCCAAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118830.8 |
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| CDS CCA 72 bp | CACAGTAGAAGCCTGGATGTCCATCAGCACAAACGATaGAATAATGTTTCTCATCGAAGTCTCCTCTCACGA | + |
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Preference number: 6 (lower is better) Translates to: HSRSLDVHQHKR*NNVSHRSLLSR Trigger: TCGTGAGAGGAGACTTCGATGAGAAACATTATTCCATCGTTTGTGCTGATGGACATCCAGGCTTCTACTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118765.8 |
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