Pregenerated sensors for VPS26B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031988Ensembl transcript IDs: ENSMUST00000034470.11
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACAGCCAGTTGAACCTCACACCATCCTCCCCCTCCCGCAGTGGCTaGTATTCGGCAGATGGGGGTTCTGTGGTGGAAGCCCAGCAACTT | + |
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Preference number: 1 (lower is better) Translates to: NSQLNLTPSSPSRSG*YSADGGSVVEAQQL Trigger: AAGTTGCTGGGCTTCCACCACAGAACCCCCATCTGCCGAATACCAGCCACTGCGGGAGGGGGAGGATGGTGTGAGGTTCAACTGGCTGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR GCA 90 bp | GAGATTAGCTTCCAGAATGTTTCCTCTCCTTATCCCTACCTAGGCTaGAGCATCCCGGGGAGACTGCTGCCCAACCCAAGCCCCTTAGGT | + |
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Preference number: 1 (lower is better) Translates to: EISFQNVSSPYPYLG*SIPGRLLPNPSPLG Trigger: ACCTAAGGGGCTTGGGTTGGGCAGCAGTCTCCCCGGGATGCTGCAGCCTAGGTAGGGATAAGGAGAGGAAACATTCTGGAAGCTAATCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR TCA 90 bp | CATATGCTAGGGCCCAGCCTTGATAGCCAAGGACAGCTGGATGGGTaGACCTGTTCCCATGGGGATTGTATGTCACACCTAAACCTGGGG | + |
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Preference number: 1 (lower is better) Translates to: HMLGPSLDSQGQLDG*TCSHGDCMSHLNLG Trigger: CCCCAGGTTTAGGTGTGACATACAATCCCCATGGGAACAGGTTCACCCATCCAGCTGTCCTTGGCTATCAAGGCTGGGCCCTAGCATATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR GCA 90 bp | AGGGAGTATAAGACACGACTACCCAGAGCCCTGGTGGCAGGTAAATaGCAGGGACACACTCAGCTTCTGTATCAGGAAGCCCAGAGAACC | + |
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Preference number: 1 (lower is better) Translates to: REYKTRLPRALVAGK*QGHTQLLYQEAQRT Trigger: GGTTCTCTGGGCTTCCTGATACAGAAGCTGAGTGTGTCCCTGGCATTTACCTGCCACCAGGGCTCTGGGTAGTCGTGTCTTATACTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR TCA 90 bp | CCCTACAACAACCCAGACACTGGGTTGCCAAGAGGAGTCATGTGGTaGAGGCAGACGGTTGCCTTGCCTGATGTTTCTTTTTCCCCCTCA | + |
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Preference number: 1 (lower is better) Translates to: PYNNPDTGLPRGVMW*RQTVALPDVSFSPS Trigger: TGAGGGGGAAAAAGAAACATCAGGCAAGGCAACCGTCTGCCTTCACCACATGACTCCTCTTGGCAACCCAGTGTCTGGGTTGTTGTAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR CCA 90 bp | AGAACAGTCACAGGGAGTATAAGACACGACTACCCAGAGCCCTGGTaGCAGGTAAATGCCAGGGACACACTCAGCTTCTGTATCAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: RTVTGSIRHDYPEPW*QVNARDTLSFCIRK Trigger: CTTCCTGATACAGAAGCTGAGTGTGTCCCTGGCATTTACCTGCCACCAGGGCTCTGGGTAGTCGTGTCTTATACTCCCTGTGACTGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR CCA 90 bp | GTAGCAGAGCCCTGTGCAGAGGTCCTTCCTCCCCTAATTTGTAGATaGTGGGATGAAAGGGTTTGGGTGGGAGTAAGGACAAAACTTATA | + |
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Preference number: 1 (lower is better) Translates to: VAEPCAEVLPPLICR*WDERVWVGVRTKLI Trigger: TATAAGTTTTGTCCTTACTCCCACCCAAACCCTTTCATCCCACCATCTACAAATTAGGGGAGGAAGGACCTCTGCACAGGGCTCTGCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR CCA 90 bp | TGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAAAGGAGAACGGGGGACAGGGAAGCCCAGAGAACCTaGAGCCAAGGATGTGTGCTC | + |
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Preference number: 2 (lower is better) Translates to: WEPSHTFTVGRERRTGDREAQRT*SQGCVL Trigger: GAGCACACATCCTTGGCTCCAGGTTCTCTGGGCTTC...CCTGTCCCCCGTTCTCCTTTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR GCA 90 bp | TGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAAAGGAGAACGGGGGACAGGCTGGTGGCAGGTAAATaGCAGGGACACACTCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: WEPSHTFTVGRERRTGDRLVAGK*QGHTQL Trigger: AAGCTGAGTGTGTCCCTGGCATTTACCTGCCACCAG...CCTGTCCCCCGTTCTCCTTTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR CCA 90 bp | TATCTCAGAACAGTCACAGGGAGTATAAGACACGACTACCCAGAGCCCTGGTGGCTGGTATTCGGCAGATaGGGGTTCTGTGGTGGAAGC | + |
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Preference number: 2 (lower is better) Translates to: YLRTVTGSIRHDYPEPWWLVFGR*GFCGGS Trigger: GCTTCCACCACAGAACCCCCATCTGCCGAATACCAG...CCACCAGGGCTCTGGGTAGTCGTGTCTTATACTCCCTGTGACTGTTCTGAGATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR CCA 90 bp | AACCTTAAAGGATGGGGATGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAACTCCCCCTCCCGCAGTaGCTGGTATTCGGCAGATGG | + |
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Preference number: 2 (lower is better) Translates to: NLKGWGWEPSHTFTVGRELPLPQ*LVFGRW Trigger: CCATCTGCCGAATACCAGCCACTGCGGGAGGGGGAG...TTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCATCCCCATCCTTTAAGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGACAAGGAGTAGGACAAACTGCTTTAGGAGGCAAGTGGAGCCCAGCCTCGGAGCCAAGGATGTGTaGTCTCAACTCTGCTTTAAG | + |
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Preference number: 2 (lower is better) Translates to: QKTRSRTNCFRRQVEPSLGAKDV*SQLCFK Trigger: CTTAAAGCAGAGTTGAGAGCACACATCCTTGGCTCC...GAGGCTGGGCTCCACTTGCCTCCTAAAGCAGTTTGTCCTACTCCTTGTCTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR TCA 90 bp | TCTCAGACAGGGGAGGACAGCCAACAGGAGATGGTAATTCTAGTCATTTCCAGAGGCTTGAGACAGCCTTaGCACAGAGCTCATTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: SQTGEDSQQEMVILVISRGLRQP*HRAHSQ Trigger: TTGGGAATGAGCTCTGTGTCAAGGCTGTCTCAAGCC...TCTGGAAATGACTAGAATTACCATCTCCTGTTGGCTGTCCTCCCCTGTCTGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR TCA 90 bp | AACCTTAAAGGATGGGGATGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAAAGAGGAGTCATGTGGTaGAGGCAGACGGTTGCCTTG | + |
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Preference number: 2 (lower is better) Translates to: NLKGWGWEPSHTFTVGRERGVMW*RQTVAL Trigger: CAAGGCAACCGTCTGCCTTCACCACATGACTCCTCT...TTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCATCCCCATCCTTTAAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR GCA 90 bp | CAGAAGACAAGGAGTAGGACAAACTGCTTTAGGAGGCAAGTGGAGCCCAGCCTCATCAGGGCTTCTCTGTaGCTGTTTCTCACAAGTAAG | + |
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Preference number: 2 (lower is better) Translates to: QKTRSRTNCFRRQVEPSLIRASL*LFLTSK Trigger: CTTACTTGTGAGAAACAGGCACAGAGAAGCCCTGAT...GAGGCTGGGCTCCACTTGCCTCCTAAAGCAGTTTGTCCTACTCCTTGTCTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR CCA 90 bp | CCCTTCTGTCACTATCTCAGAACAGTCACAGGGAGTATAAGACACGACTACCCAATGGGGGTTCTGTGGTaGAAGCCCAGCAACTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: PFCHYLRTVTGSIRHDYPMGVLW*KPSNFL Trigger: CAAGAAGTTGCTGGGCTTCCACCACAGAACCCCCAT...TGGGTAGTCGTGTCTTATACTCCCTGTGACTGTTCTGAGATAGTGACAGAAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR TCA 90 bp | TGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAAAGGAGAACGGGGGACAGGGTAGCTTCCTGTTCTTaGGTGTTCTTCCAAGTTAGA | + |
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Preference number: 2 (lower is better) Translates to: WEPSHTFTVGRERRTGDRVASCS*VFFQVR Trigger: TCTAACTTGGAAGAACACTCAAGAACAGGAAGCTAC...CCTGTCCCCCGTTCTCCTTTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR CCA 90 bp | TGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAAAGGAGAACGGGGGACAGGACCTGGGGTTGTGCATaGAGAAAACTTTACTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: WEPSHTFTVGRERRTGDRTWGCA*RKLYFP Trigger: AGGAAAGTAAAGTTTTCTCCATGCACAACCCCAGGT...CCTGTCCCCCGTTCTCCTTTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR CAA 90 bp | TCCAAGAGTCTTTCATCCAACGGCCCGCCCTGTCAAAGCCAGAGATaGCAAGAGTCCCATTTTCTACATGAACTGAAAGATGACACAGGA | + |
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Preference number: 2 (lower is better) Translates to: SKSLSSNGPPCQSQR*QESHFLHELKDDTG Trigger: TCCTGTGTCATCTTTCAGTTCATGTAGAAAATGGGACTCTTGCAATCTCTGGCTTTGACAGGGCGGGCCGTTGGATGAAAGACTCTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR CAA 90 bp | GCAGAGAAAGGAGAACGGGGGACAGGCAGAGAAAACATACTTGGCTaGTGCACAGCTCCTGAGAGAAACAGCATATTCTACCTTCTAGTT | + |
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Preference number: 2 (lower is better) Translates to: AEKGERGTGRENILG*CTAPERNSIFYLLV Trigger: AACTAGAAGGTAGAATATGCTGTTTCTCTCAGGAGCTGTGCACAAGCCAAGTATGTTTTCTCTGCCTGTCCCCCGTTCTCCTTTCTCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR TCA 90 bp | GGAGAAAACTTTACTTTCCTTAGCTCTGCTACCCCCAGTCATTCCAAGAGTCTTGACGGTTGCCTTGCCTaGTGTTTCTTTTTCCCCCTC | + |
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Preference number: 2 (lower is better) Translates to: GENFTFLSSATPSHSKSLDGCLA*CFFFPL Trigger: GAGGGGGAAAAAGAAACATCAGGCAAGGCAACCGTC...AAGACTCTTGGAATGACTGGGGGTAGCAGAGCTAAGGAAAGTAAAGTTTTCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR TCA 90 bp | AACCTTAAAGGATGGGGATGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAATCTAGTCTCATATCCTaGAAAGGGCAAGAGCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: NLKGWGWEPSHTFTVGRESSLIS*KGQEPR Trigger: TCTGGGCTCTTGCCCTTTTCAGGATATGAGACTAGA...TTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCATCCCCATCCTTTAAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR GCA 90 bp | GGAGAAAACTTTACTTTCCTTAGCTCTGCTACCCCCAGTCATTCCAAGAGTCTTCCTTCCTTAAGCTTCTaGTCCTGTATAGTTCTTGAC | + |
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Preference number: 2 (lower is better) Translates to: GENFTFLSSATPSHSKSLPSLSF*SCIVLD Trigger: GTCAAGAACTATACAGGAGCAGAAGCTTAAGGAAGG...AAGACTCTTGGAATGACTGGGGGTAGCAGAGCTAAGGAAAGTAAAGTTTTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR CCA 90 bp | GGAGAAAACTTTACTTTCCTTAGCTCTGCTACCCCCAGTCATTCCAAGAGTCTTCTAATTTGTAGATGGTaGGATGAAAGGGTTTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: GENFTFLSSATPSHSKSLLICRW*DERVWV Trigger: CACCCAAACCCTTTCATCCCACCATCTACAAATTAG...AAGACTCTTGGAATGACTGGGGGTAGCAGAGCTAAGGAAAGTAAAGTTTTCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR TCA 90 bp | GGAGAAAACTTTACTTTCCTTAGCTCTGCTACCCCCAGTCATTCCAAGAGTCTTCTCCTGTATAGTTCTTaGCAAGCTAGAGAAGATGAA | + |
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Preference number: 2 (lower is better) Translates to: GENFTFLSSATPSHSKSLLLYSS*QAREDE Trigger: TTCATCTTCTCTAGCTTGTCAAGAACTATACAGGAG...AAGACTCTTGGAATGACTGGGGGTAGCAGAGCTAAGGAAAGTAAAGTTTTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR CCA 72 bp | TTGAACCTCACACCATCCTCCCCCTCCCGCAGTGGCTaGTATTCGGCAGATGGGGGTTCTGTGGTGGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: LNLTPSSPSRSG*YSADGGSVVEA Trigger: GGCTTCCACCACAGAACCCCCATCTGCCGAATACCAGCCACTGCGGGAGGGGGAGGATGGTGTGAGGTTCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR GCA 72 bp | AAGACACGACTACCCAGAGCCCTGGTGGCAGGTAAATaGCAGGGACACACTCAGCTTCTGTATCAGGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: KTRLPRALVAGK*QGHTQLLYQEA Trigger: GGCTTCCTGATACAGAAGCTGAGTGTGTCCCTGGCATTTACCTGCCACCAGGGCTCTGGGTAGTCGTGTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR CCA 72 bp | GTCACAGGGAGTATAAGACACGACTACCCAGAGCCCTaGTGGCAGGTAAATGCCAGGGACACACTCAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: VTGSIRHDYPEP*WQVNARDTLSF Trigger: GAAGCTGAGTGTGTCCCTGGCATTTACCTGCCACCAGGGCTCTGGGTAGTCGTGTCTTATACTCCCTGTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR TCA 72 bp | TCAGGAGACCTAGTTCAGCCCCTTGCCATCCATGTGTaGCACCGAATCAGGGCTTCTCTGTGCCTGTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: SGDLVQPLAIHV*HRIRASLCLFL Trigger: GAGAAACAGGCACAGAGAAGCCCTGATTCGGTGTCACACATGGATGGCAAGGGGCTGAACTAGGTCTCCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR CCA 72 bp | ACAGGGAGTATAAGACACGACTACCCAGAGCCCTGGTaGCAGGTAAATGCCAGGGACACACTCAGCTTCTGT | + |
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Preference number: 3 (lower is better) Translates to: TGSIRHDYPEPW*QVNARDTLSFC Trigger: ACAGAAGCTGAGTGTGTCCCTGGCATTTACCTGCCACCAGGGCTCTGGGTAGTCGTGTCTTATACTCCCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR TCA 72 bp | CATGATTTGTTTCCAAGGTTGCAAGTAACAGCCAGTTaGACCTCACACCATCCTCCCCCTCCCGCAGTGGCT | + |
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Preference number: 3 (lower is better) Translates to: HDLFPRLQVTAS*TSHHPPPPAVA Trigger: AGCCACTGCGGGAGGGGGAGGATGGTGTGAGGTTCAACTGGCTGTTACTTGCAACCTTGGAAACAAATCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR CCA 72 bp | CCCTGTGCAGAGGTCCTTCCTCCCCTAATTTGTAGATaGTGGGATGAAAGGGTTTGGGTGGGAGTAAGGACA | + |
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Preference number: 3 (lower is better) Translates to: PCAEVLPPLICR*WDERVWVGVRT Trigger: TGTCCTTACTCCCACCCAAACCCTTTCATCCCACCATCTACAAATTAGGGGAGGAAGGACCTCTGCACAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR TCA 72 bp | AGGAGTCATGTGGTGAAGGCAGACGGTTGCCTTGCCTaGTGTTTCTTTTTCCCCCTCAGGAGACCTAGTTCA | + |
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Preference number: 3 (lower is better) Translates to: RSHVVKADGCLA*CFFFPLRRPSS Trigger: TGAACTAGGTCTCCTGAGGGGGAAAAAGAAACATCAGGCAAGGCAACCGTCTGCCTTCACCACATGACTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR TCA 72 bp | AACCCAGACACTGGGTTGCCAAGAGGAGTCATGTGGTaGAGGCAGACGGTTGCCTTGCCTGATGTTTCTTTT | + |
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Preference number: 3 (lower is better) Translates to: NPDTGLPRGVMW*RQTVALPDVSF Trigger: AAAAGAAACATCAGGCAAGGCAACCGTCTGCCTTCACCACATGACTCCTCTTGGCAACCCAGTGTCTGGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR CAA 90 bp | CCCTTCTGTCACTATCTCAGAACAGTCACAGGGAGTATAAGACACGACTACCCAGCAAGTAACAGCCAGTaGAACCTCACACCATCCTCC | + |
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Preference number: 3 (lower is better) Translates to: PFCHYLRTVTGSIRHDYPASNSQ*NLTPSS Trigger: GGAGGATGGTGTGAGGTTCAACTGGCTGTTACTTGC...TGGGTAGTCGTGTCTTATACTCCCTGTGACTGTTCTGAGATAGTGACAGAAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR CAA 90 bp | AACCTTAAAGGATGGGGATGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAAAACCCAGACACTGGGTaGCCAAGAGGAGTCATGTGG | + |
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Preference number: 3 (lower is better) Translates to: NLKGWGWEPSHTFTVGRENPDTG*PRGVMW Trigger: CCACATGACTCCTCTTGGCAACCCAGTGTCTGGGTT...TTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCATCCCCATCCTTTAAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR TCA 72 bp | GCCAAGGATGTGTGCTCTCAACTCTGCTTTAAGGCTTaGGACAGCCTTGACACAGAGCTCATTCCCAAGGAA | + |
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Preference number: 3 (lower is better) Translates to: AKDVCSQLCFKA*DSLDTELIPKE Trigger: TTCCTTGGGAATGAGCTCTGTGTCAAGGCTGTCTCAAGCCTTAAAGCAGAGTTGAGAGCACACATCCTTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR TCA 72 bp | TTAAAAGGAGGCACGGCAGAGTCTAGTCTCATATCCTaGAAAGGGCAAGAGCCCAGAACCCAACTCCCTCAT | + |
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Preference number: 3 (lower is better) Translates to: LKGGTAESSLIS*KGQEPRTQLPH Trigger: ATGAGGGAGTTGGGTTCTGGGCTCTTGCCCTTTTCAGGATATGAGACTAGACTCTGCCGTGCCTCCTTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR GCA 72 bp | ACAGACCAGCGAACACTACTTGTTGAACATCAGGTCTaGTTGATCTTTCTCAGACAGGGGAGGACAGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: TDQRTLLVEHQV*LIFLRQGRTAN Trigger: GTTGGCTGTCCTCCCCTGTCTGAGAAAGATCAAGCAGACCTGATGTTCAACAAGTAGTGTTCGCTGGTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR CAA 90 bp | AACCTTAAAGGATGGGGATGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAAAGGCTTGAGACAGCCTaGACACAGAGCTCATTCCCA | + |
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Preference number: 3 (lower is better) Translates to: NLKGWGWEPSHTFTVGRERLETA*TQSSFP Trigger: TGGGAATGAGCTCTGTGTCAAGGCTGTCTCAAGCCT...TTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCATCCCCATCCTTTAAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR GCA 72 bp | GAACGGGGGACAGGCAGAGAAAACATACTTGGCTTGTaGACAGCTCCTGAGAGAAACAGCATATTCTACCTT | + |
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Preference number: 3 (lower is better) Translates to: ERGTGRENILGL*TAPERNSIFYL Trigger: AAGGTAGAATATGCTGTTTCTCTCAGGAGCTGTGCACAAGCCAAGTATGTTTTCTCTGCCTGTCCCCCGTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR CCA 72 bp | TGTGCAGAGGTCCTTCCTCCCCTAATTTGTAGATGGTaGGATGAAAGGGTTTGGGTGGGAGTAAGGACAAAA | + |
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Preference number: 3 (lower is better) Translates to: CAEVLPPLICRW*DERVWVGVRTK Trigger: TTTTGTCCTTACTCCCACCCAAACCCTTTCATCCCACCATCTACAAATTAGGGGAGGAAGGACCTCTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR CAA 90 bp | AACCTTAAAGGATGGGGATGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAACAACCCCTTTTCTACTaGCAGGCCAAGCATAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: NLKGWGWEPSHTFTVGREQPLFY*QAKHRA Trigger: TGCTCTATGCTTGGCCTGCAAGTAGAAAAGGGGTTG...TTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCATCCCCATCCTTTAAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR CAA 90 bp | AACCTTAAAGGATGGGGATGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAAGAACATCAGGTCTGCTaGATCTTTCTCAGACAGGGG | + |
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Preference number: 3 (lower is better) Translates to: NLKGWGWEPSHTFTVGREEHQVC*IFLRQG Trigger: CCCCTGTCTGAGAAAGATCAAGCAGACCTGATGTTC...TTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCATCCCCATCCTTTAAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR CAA 90 bp | AACCTTAAAGGATGGGGATGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAAGCAGAGAAAACATACTaGGCTTGTGCACAGCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: NLKGWGWEPSHTFTVGREAEKTY*ACAQLL Trigger: CAGGAGCTGTGCACAAGCCAAGTATGTTTTCTCTGC...TTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCATCCCCATCCTTTAAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR CAA 90 bp | AACCTTAAAGGATGGGGATGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAATGTCAAAGCCAGAGATaGCAAGAGTCCCATTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: NLKGWGWEPSHTFTVGRECQSQR*QESHFL Trigger: TAGAAAATGGGACTCTTGCAATCTCTGGCTTTGACA...TTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCATCCCCATCCTTTAAGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| 3UTR-3UTR CAA 90 bp | TCTCAGACAGGGGAGGACAGCCAACAGGAGATGGTAATTCTAGTCATTTCCAGAAAAACTTATACATGCTaGAAACAAAGCCCAGTTCCA | + |
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Preference number: 3 (lower is better) Translates to: SQTGEDSQQEMVILVISRKTYTC*KQSPVP Trigger: TGGAACTGGGCTTTGTTTCAAGCATGTATAAGTTTT...TCTGGAAATGACTAGAATTACCATCTCCTGTTGGCTGTCCTCCCCTGTCTGAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS-3UTR TCA 90 bp | CACACCATCCTCCCCCTCCCGCAGTGGCTGGTATTCGGCAGATGGGGGTTCTGTCTGCCAGGAAGAGCCTaGTGGGGATGGACTCACCTC | + |
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Preference number: 4 (lower is better) Translates to: HTILPLPQWLVFGRWGFCLPGRA*WGWTHL Trigger: GAGGTGAGTCCATCCCCATCAGGCTCTTCCTGGCAG...ACAGAACCCCCATCTGCCGAATACCAGCCACTGCGGGAGGGGGAGGATGGTGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS-3UTR CCA 90 bp | CTACCTAGGCTGCAGCATCCCGGGGAGACTGCTGCCCAACCCAAGCCCCTTAGGTCGAAGGCCTGCGATTaGGTGATCTCTCCTGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LPRLQHPGETAAQPKPLRSKACD*VISPGR Trigger: TCGGCCAGGAGAGATCACCCAATCGCAGGCCTTCGA...CCTAAGGGGCTTGGGTTGGGCAGCAGTCTCCCCGGGATGCTGCAGCCTAGGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR GCA 90 bp | CACACCATCCTCCCCCTCCCGCAGTGGCTGGTATTCGGCAGATGGGGGTTCTGTCCGTCCTCAGTCTTGTaGTCCGCTCGCTTCCTACTC | + |
|
Preference number: 4 (lower is better) Translates to: HTILPLPQWLVFGRWGFCPSSVL*SARFLL Trigger: GAGTAGGAAGCGAGCGGAGCACAAGACTGAGGACGG...ACAGAACCCCCATCTGCCGAATACCAGCCACTGCGGGAGGGGGAGGATGGTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR GCA 90 bp | CTACCTAGGCTGCAGCATCCCGGGGAGACTGCTGCCCAACCCAAGCCCCTTAGGTGTGAGCTCATACCCTaGCAGGAAGAGCCTGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPRLQHPGETAAQPKPLRCELIP*QEEPDG Trigger: CCCATCAGGCTCTTCCTGGCAGGGTATGAGCTCACA...CCTAAGGGGCTTGGGTTGGGCAGCAGTCTCCCCGGGATGCTGCAGCCTAGGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR TCA 90 bp | CTACCTAGGCTGCAGCATCCCGGGGAGACTGCTGCCCAACCCAAGCCCCTTAGGTTCCATCTTGATGGATaGGTTCAGCTCGGGGTATGT | + |
|
Preference number: 4 (lower is better) Translates to: LPRLQHPGETAAQPKPLRFHLDG*VQLGVC Trigger: ACATACCCCGAGCTGAACTCATCCATCAAGATGGAA...CCTAAGGGGCTTGGGTTGGGCAGCAGTCTCCCCGGGATGCTGCAGCCTAGGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR GCA 90 bp | CACACCATCCTCCCCCTCCCGCAGTGGCTGGTATTCGGCAGATGGGGGTTCTGTTCAAAGTCGAAGGCCTaGGATTGGGTGATCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HTILPLPQWLVFGRWGFCSKSKA*DWVISP Trigger: AGGAGAGATCACCCAATCGCAGGCCTTCGACTTTGA...ACAGAACCCCCATCTGCCGAATACCAGCCACTGCGGGAGGGGGAGGATGGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR CCA 90 bp | CACACCATCCTCCCCCTCCCGCAGTGGCTGGTATTCGGCAGATGGGGGTTCTGTTCGATCTTGATGCCCTaGTGCTCTAGTCGCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: HTILPLPQWLVFGRWGFCSILMP*CSSRLL Trigger: CAACAAGCGACTAGAGCACCAGGGCATCAAGATCGA...ACAGAACCCCCATCTGCCGAATACCAGCCACTGCGGGAGGGGGAGGATGGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR TCA 90 bp | TCTCAGACAGGGGAGGACAGCCAACAGGAGATGGTAATTCTAGTCATTTCCAGAGCCCTCGAAGCGCTGTaGGGCAATGGCTGCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SQTGEDSQQEMVILVISRALEAL*GNGCLV Trigger: CACCAGGCAGCCATTGCCTCACAGCGCTTCGAGGGC...TCTGGAAATGACTAGAATTACCATCTCCTGTTGGCTGTCCTCCCCTGTCTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR GCA 90 bp | ACCTGTTCCCATGGGGATTGTATGTCACACCTAAACCTGGGGTTGTGCATGGAGTCCACCTCCACGCTCTaGCCGAAGCCGAAGAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TCSHGDCMSHLNLGLCMESTSTL*PKPKKL Trigger: GAGCTTCTTCGGCTTCGGGCAGAGCGTGGAGGTGGA...CTCCATGCACAACCCCAGGTTTAGGTGTGACATACAATCCCCATGGGAACAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR CCA 90 bp | TATCTCAGAACAGTCACAGGGAGTATAAGACACGACTACCCAGAGCCCTGGTGGAGCGCTGTGAGGCAATaGCTGCCTGGTGGGACATGC | + |
|
Preference number: 4 (lower is better) Translates to: YLRTVTGSIRHDYPEPWWSAVRQ*LPGGTC Trigger: GCATGTCCCACCAGGCAGCCATTGCCTCACAGCGCT...CCACCAGGGCTCTGGGTAGTCGTGTCTTATACTCCCTGTGACTGTTCTGAGATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR TCA 90 bp | TATCTCAGAACAGTCACAGGGAGTATAAGACACGACTACCCAGAGCCCTGGTGGCCACTTCCTGCTGCTTaGAGTAGCGCCGTTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: YLRTVTGSIRHDYPEPWWPLPAA*SSAVPP Trigger: AGGAGGAACGGCGCTACTTCAAGCAGCAGGAAGTGG...CCACCAGGGCTCTGGGTAGTCGTGTCTTATACTCCCTGTGACTGTTCTGAGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR GCA 90 bp | TGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAAAGGAGAACGGGGGACAGGCTGCCTGGTGGGACATaGTCTTCCGTACGATGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: WEPSHTFTVGRERRTGDRLPGGT*SSVRCH Trigger: GTGACATCGTACGGAAGAGCATGTCCCACCAGGCAG...CCTGTCCCCCGTTCTCCTTTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR CCA 90 bp | ACCTGTTCCCATGGGGATTGTATGTCACACCTAAACCTGGGGTTGTGCATGGAGGAGGCAATGGCTGCCTaGTGGGACATGCTCTTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: TCSHGDCMSHLNLGLCMEEAMAA*WDMLFR Trigger: ACGGAAGAGCATGTCCCACCAGGCAGCCATTGCCTC...CTCCATGCACAACCCCAGGTTTAGGTGTGACATACAATCCCCATGGGAACAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| 3UTR CAA 72 bp | GGTTGCCAAGAGGAGTCATGTGGTGAAGGCAGACGGTaGCCTTGCCTGATGTTTCTTTTTCCCCCTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCQEESCGEGRR*PCLMFLFPPQE Trigger: CTCCTGAGGGGGAAAAAGAAACATCAGGCAAGGCAACCGTCTGCCTTCACCACATGACTCCTCTTGGCAACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR TCA 90 bp | CACACCATCCTCCCCCTCCCGCAGTGGCTGGTATTCGGCAGATGGGGGTTCTGTTATGTGCTAAGTGTGTaGACTACAATGTCCATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HTILPLPQWLVFGRWGFCYVLSV*TTMSIS Trigger: AGAGATGGACATTGTAGTTCACACACTTAGCACATA...ACAGAACCCCCATCTGCCGAATACCAGCCACTGCGGGAGGGGGAGGATGGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR GCA 90 bp | CACACCATCCTCCCCCTCCCGCAGTGGCTGGTATTCGGCAGATGGGGGTTCTGTTACTCAAATTCAATGTaGAGGCAATCCTCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: HTILPLPQWLVFGRWGFCYSNSM*RQSSMP Trigger: TGGCATTGAGGATTGCCTGCACATTGAATTTGAGTA...ACAGAACCCCCATCTGCCGAATACCAGCCACTGCGGGAGGGGGAGGATGGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR GCA 90 bp | AACCTTAAAGGATGGGGATGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAACACCCAGGGAGGTTGTaGCCTCGAAGCGCTGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLKGWGWEPSHTFTVGREHPGRL*PRSAVR Trigger: CCTCACAGCGCTTCGAGGGCACAACCTCCCTGGGTG...TTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCATCCCCATCCTTTAAGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR CCA 90 bp | CCCTTCTGTCACTATCTCAGAACAGTCACAGGGAGTATAAGACACGACTACCCAGGACTCACCTCGGACTaGTGCCCCGTCCATGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: PFCHYLRTVTGSIRHDYPGLTSD*CPVHDL Trigger: GAGATCATGGACGGGGCACCAGTCCGAGGTGAGTCC...TGGGTAGTCGTGTCTTATACTCCCTGTGACTGTTCTGAGATAGTGACAGAAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| 3UTR CAA 72 bp | AGGACAGCTGGATGGGTGAACCTGTTCCCATGGGGATaGTATGTCACACCTAAACCTGGGGTTGTGCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTAGWVNLFPWG*YVTPKPGVVHG Trigger: TCCATGCACAACCCCAGGTTTAGGTGTGACATACAATCCCCATGGGAACAGGTTCACCCATCCAGCTGTCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR TCA 90 bp | TGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAAAGGAGAACGGGGGACAGGGCTTTTCCACATGGGTaGACTCAAAGTCGAAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WEPSHTFTVGRERRTGDRAFPHG*TQSRRP Trigger: AGGCCTTCGACTTTGAGTTCACCCATGTGGAAAAGC...CCTGTCCCCCGTTCTCCTTTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR CCA 90 bp | ACCTGTTCCCATGGGGATTGTATGTCACACCTAAACCTGGGGTTGTGCATGGAGATTGTGTCGTTCTCGTaGTACACGTTGGGACCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TCSHGDCMSHLNLGLCMEIVSFS*YTLGPV Trigger: CACGGGTCCCAACGTGTACCACGAGAACGACACAAT...CTCCATGCACAACCCCAGGTTTAGGTGTGACATACAATCCCCATGGGAACAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR CCA 90 bp | AACCTTAAAGGATGGGGATGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAATTGGGTGATCTCTCCTaGCCGAGCCAGGTCCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NLKGWGWEPSHTFTVGRELGDLS*PSQVLH Trigger: GTGAAGGACCTGGCTCGGCCAGGAGAGATCACCCAA...TTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCATCCCCATCCTTTAAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR CCA 90 bp | TCTCAGACAGGGGAGGACAGCCAACAGGAGATGGTAATTCTAGTCATTTCCAGATTGTTGTCAGACAGTTaGCCAGGGGTCCGCACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQTGEDSQQEMVILVISRLLSDS*PGVRTS Trigger: TGAGGTGCGGACCCCTGGCCAACTGTCTGACAACAA...TCTGGAAATGACTAGAATTACCATCTCCTGTTGGCTGTCCTCCCCTGTCTGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR TCA 90 bp | TATCTCAGAACAGTCACAGGGAGTATAAGACACGACTACCCAGAGCCCTGGTGGCTATCAGCACCAAGTTaGGGTAATAGCGCACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YLRTVTGSIRHDYPEPWWLSAPS*GNSAQR Trigger: TCTCTGTGCGCTATTACCTCAACTTGGTGCTGATAG...CCACCAGGGCTCTGGGTAGTCGTGTCTTATACTCCCTGTGACTGTTCTGAGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR GCA 90 bp | AACCTTAAAGGATGGGGATGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAACTCACCTCGGACTGGTaGCCCGTCCATGATCTCATA | + |
|
Preference number: 4 (lower is better) Translates to: NLKGWGWEPSHTFTVGRELTSDW*PVHDLI Trigger: TATGAGATCATGGACGGGGCACCAGTCCGAGGTGAG...TTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCATCCCCATCCTTTAAGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR CCA 90 bp | GGAGAAAACTTTACTTTCCTTAGCTCTGCTACCCCCAGTCATTCCAAGAGTCTTGCAATGGCTGCCTGGTaGGACATGCTCTTCCGTACG | + |
|
Preference number: 4 (lower is better) Translates to: GENFTFLSSATPSHSKSLAMAAW*DMLFRT Trigger: CGTACGGAAGAGCATGTCCCACCAGGCAGCCATTGC...AAGACTCTTGGAATGACTGGGGGTAGCAGAGCTAAGGAAAGTAAAGTTTTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| 3UTR CAA 72 bp | GGAGAACGGGGGACAGGCAGAGAAAACATACTTGGCTaGTGCACAGCTCCTGAGAGAAACAGCATATTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GERGTGRENILG*CTAPERNSIFY Trigger: GTAGAATATGCTGTTTCTCTCAGGAGCTGTGCACAAGCCAAGTATGTTTTCTCTGCCTGTCCCCCGTTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR TCA 90 bp | AACCTTAAAGGATGGGGATGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAACTGGTGCCCCGTCCATaGTCTCATACTTCGCTATTG | + |
|
Preference number: 4 (lower is better) Translates to: NLKGWGWEPSHTFTVGRELVPRP*SHTSLL Trigger: CAATAGCGAAGTATGAGATCATGGACGGGGCACCAG...TTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCATCCCCATCCTTTAAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR GCA 90 bp | AACCTTAAAGGATGGGGATGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAAATCTTGATGCCCTGGTaGTCTAGTCGCTTGTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLKGWGWEPSHTFTVGREILMPW*SSRLLG Trigger: CCCCAACAAGCGACTAGAGCACCAGGGCATCAAGAT...TTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCATCCCCATCCTTTAAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR TCA 90 bp | GGAGAAAACTTTACTTTCCTTAGCTCTGCTACCCCCAGTCATTCCAAGAGTCTTTGCCAACTTCCATCTTaGTGGATGAGTTCAGCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GENFTFLSSATPSHSKSLCQLPS*WMSSAR Trigger: CCGAGCTGAACTCATCCATCAAGATGGAAGTTGGCA...AAGACTCTTGGAATGACTGGGGGTAGCAGAGCTAAGGAAAGTAAAGTTTTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| 3UTR CAA 72 bp | TGTGCTCTCAACTCTGCTTTAAGGCTTGAGACAGCCTaGACACAGAGCTCATTCCCAAGGAAGAGATTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CALNSALRLETA*TQSSFPRKRLA Trigger: AGCTAATCTCTTCCTTGGGAATGAGCTCTGTGTCAAGGCTGTCTCAAGCCTTAAAGCAGAGTTGAGAGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| 3UTR CAA 72 bp | CTTTCATCCAACGGCCCGCCCTGTCAAAGCCAGAGATaGCAAGAGTCCCATTTTCTACATGAACTGAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSSNGPPCQSQR*QESHFLHELKD Trigger: ATCTTTCAGTTCATGTAGAAAATGGGACTCTTGCAATCTCTGGCTTTGACAGGGCGGGCCGTTGGATGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR CCA 90 bp | AACCTTAAAGGATGGGGATGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAATACGGCTTTTCCACATaGGTGAACTCAAAGTCGAAG | + |
|
Preference number: 4 (lower is better) Translates to: NLKGWGWEPSHTFTVGREYGFST*VNSKSK Trigger: CTTCGACTTTGAGTTCACCCATGTGGAAAAGCCGTA...TTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCATCCCCATCCTTTAAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR GCA 90 bp | AACCTTAAAGGATGGGGATGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAAATGTCTATCTCCATGTaGTTGATCTTGATTCTCACC | + |
|
Preference number: 4 (lower is better) Translates to: NLKGWGWEPSHTFTVGREMSISM*LILILT Trigger: GGTGAGAATCAAGATCAAGCACATGGAGATAGACAT...TTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCATCCCCATCCTTTAAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS GCA 90 bp | TGTCAGACAGTTGGCCAGGGGTCCGCACCTCACCCAGGGAGGTTGTaGCCTCGAAGCGCTGTGAGGCAATGGCTGCCTGGTGGGACATGC | + |
|
Preference number: 5 (lower is better) Translates to: CQTVGQGSAPHPGRL*PRSAVRQWLPGGTC Trigger: GCATGTCCCACCAGGCAGCCATTGCCTCACAGCGCTTCGAGGGCACAACCTCCCTGGGTGAGGTGCGGACCCCTGGCCAACTGTCTGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS TCA 90 bp | AGGGGTCCGCACCTCACCCAGGGAGGTTGTGCCCTCGAAGCGCTGTaGGGCAATGGCTGCCTGGTGGGACATGCTCTTCCGTACGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: RGPHLTQGGCALEAL*GNGCLVGHALPYDV Trigger: GACATCGTACGGAAGAGCATGTCCCACCAGGCAGCCATTGCCTCACAGCGCTTCGAGGGCACAACCTCCCTGGGTGAGGTGCGGACCCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS CCA 90 bp | CCCAGGGAGGTTGTGCCCTCGAAGCGCTGTGAGGCAATGGCTGCCTaGTGGGACATGCTCTTCCGTACGATGTCACCCTTCCGCCACAAC | + |
|
Preference number: 5 (lower is better) Translates to: PREVVPSKRCEAMAA*WDMLFRTMSPFRHN Trigger: GTTGTGGCGGAAGGGTGACATCGTACGGAAGAGCATGTCCCACCAGGCAGCCATTGCCTCACAGCGCTTCGAGGGCACAACCTCCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS CCA 90 bp | GCACCTCACCCAGGGAGGTTGTGCCCTCGAAGCGCTGTGAGGCAATaGCTGCCTGGTGGGACATGCTCTTCCGTACGATGTCACCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: APHPGRLCPRSAVRQ*LPGGTCSSVRCHPS Trigger: GGAAGGGTGACATCGTACGGAAGAGCATGTCCCACCAGGCAGCCATTGCCTCACAGCGCTTCGAGGGCACAACCTCCCTGGGTGAGGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS CCA 90 bp | AGGGAGGTTGTGCCCTCGAAGCGCTGTGAGGCAATGGCTGCCTGGTaGGACATGCTCTTCCGTACGATGTCACCCTTCCGCCACAACACC | + |
|
Preference number: 5 (lower is better) Translates to: REVVPSKRCEAMAAW*DMLFRTMSPFRHNT Trigger: GGTGTTGTGGCGGAAGGGTGACATCGTACGGAAGAGCATGTCCCACCAGGCAGCCATTGCCTCACAGCGCTTCGAGGGCACAACCTCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS GCA 90 bp | TTGTGCCCTCGAAGCGCTGTGAGGCAATGGCTGCCTGGTGGGACATaGTCTTCCGTACGATGTCACCCTTCCGCCACAACACCACTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LCPRSAVRQWLPGGT*SSVRCHPSATTPLP Trigger: AGGAAGTGGTGTTGTGGCGGAAGGGTGACATCGTACGGAAGAGCATGTCCCACCAGGCAGCCATTGCCTCACAGCGCTTCGAGGGCACAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR CAA 90 bp | CACACCATCCTCCCCCTCCCGCAGTGGCTGGTATTCGGCAGATGGGGGTTCTGTTGGTGCTCTAGTCGCTaGTTGGGGTTCTTCAGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: HTILPLPQWLVFGRWGFCWCSSR*LGFFSD Trigger: ATCACTGAAGAACCCCAACAAGCGACTAGAGCACCA...ACAGAACCCCCATCTGCCGAATACCAGCCACTGCGGGAGGGGGAGGATGGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR CAA 90 bp | CACACCATCCTCCCCCTCCCGCAGTGGCTGGTATTCGGCAGATGGGGGTTCTGTCCAATGAACTCGATCTaGATGCCCTGGTGCTCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: HTILPLPQWLVFGRWGFCPMNSI*MPWCSS Trigger: ACTAGAGCACCAGGGCATCAAGATCGAGTTCATTGG...ACAGAACCCCCATCTGCCGAATACCAGCCACTGCGGGAGGGGGAGGATGGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR CAA 90 bp | ACCTGTTCCCATGGGGATTGTATGTCACACCTAAACCTGGGGTTGTGCATGGAGCCTCACCCAGGGAGGTaGTGCCCTCGAAGCGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: TCSHGDCMSHLNLGLCMEPHPGR*CPRSAV Trigger: CACAGCGCTTCGAGGGCACAACCTCCCTGGGTGAGG...CTCCATGCACAACCCCAGGTTTAGGTGTGACATACAATCCCCATGGGAACAGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR CAA 90 bp | GAGCCCTGGTGGCAGGTAAATGCCAGGGACACACTCAGCTTCTGTATCAGGAAGTTCCCGTCCTCAGTCTaGTGCTCCGCTCGCTTCCTA | + |
|
Preference number: 5 (lower is better) Translates to: EPWWQVNARDTLSFCIRKFPSSV*CSARFL Trigger: TAGGAAGCGAGCGGAGCACAAGACTGAGGACGGGAA...CTTCCTGATACAGAAGCTGAGTGTGTCCCTGGCATTTACCTGCCACCAGGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR CAA 90 bp | CTACCTAGGCTGCAGCATCCCGGGGAGACTGCTGCCCAACCCAAGCCCCTTAGGCCTGTTGTCTCTCGTTaGATGATGTCTATCTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LPRLQHPGETAAQPKPLRPVVSR*MMSISM Trigger: CATGGAGATAGACATCATCAAACGAGAGACAACAGG...CCTAAGGGGCTTGGGTTGGGCAGCAGTCTCCCCGGGATGCTGCAGCCTAGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS-3UTR CAA 90 bp | ACCTGTTCCCATGGGGATTGTATGTCACACCTAAACCTGGGGTTGTGCATGGAGGTTGTTGTCAGACAGTaGGCCAGGGGTCCGCACCTC | + |
|
Preference number: 5 (lower is better) Translates to: TCSHGDCMSHLNLGLCMEVVVRQ*ARGPHL Trigger: GAGGTGCGGACCCCTGGCCAACTGTCTGACAACAAC...CTCCATGCACAACCCCAGGTTTAGGTGTGACATACAATCCCCATGGGAACAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS GCA 90 bp | GAACTTCTTATTTATGTCACGCATGGTGGGTGTGAGCTCATACCCTaGCAGGAAGAGCCTGATGGGGATGGACTCACCTCGGACTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ELLIYVTHGGCELIP*QEEPDGDGLTSDWC Trigger: GCACCAGTCCGAGGTGAGTCCATCCCCATCAGGCTCTTCCTGGCAGGGTATGAGCTCACACCCACCATGCGTGACATAAATAAGAAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
||
| CDS CCA 90 bp | TACGGCTTTTCCACATGGGTGAACTCAAAGTCGAAGGCCTGCGATTaGGTGATCTCTCCTGGCCGAGCCAGGTCCTTCACCAAAGACACA | + |
|
Preference number: 5 (lower is better) Translates to: YGFSTWVNSKSKACD*VISPGRARSFTKDT Trigger: TGTGTCTTTGGTGAAGGACCTGGCTCGGCCAGGAGAGATCACCCAATCGCAGGCCTTCGACTTTGAGTTCACCCATGTGGAAAAGCCGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS-3UTR CAA 90 bp | CCCTTCTGTCACTATCTCAGAACAGTCACAGGGAGTATAAGACACGACTACCCAGTCGAAGGCCTGCGATaGGGTGATCTCTCCTGGCCG | + |
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Preference number: 5 (lower is better) Translates to: PFCHYLRTVTGSIRHDYPVEGLR*GDLSWP Trigger: CGGCCAGGAGAGATCACCCAATCGCAGGCCTTCGAC...TGGGTAGTCGTGTCTTATACTCCCTGTGACTGTTCTGAGATAGTGACAGAAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS GCA 90 bp | GATTCATACGGCTTTTCCACATGGGTGAACTCAAAGTCGAAGGCCTaGGATTGGGTGATCTCTCCTGGCCGAGCCAGGTCCTTCACCAAA | + |
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Preference number: 5 (lower is better) Translates to: DSYGFSTWVNSKSKA*DWVISPGRARSFTK Trigger: TTTGGTGAAGGACCTGGCTCGGCCAGGAGAGATCACCCAATCGCAGGCCTTCGACTTTGAGTTCACCCATGTGGAAAAGCCGTATGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CCA 90 bp | GGTGCCCCGTCCATGATCTCATACTTCGCTATTGTGTCGTTCTCGTaGTACACGTTGGGACCCGTGCCTGTTGTCTCTCGTTTGATGATG | + |
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Preference number: 5 (lower is better) Translates to: GAPSMISYFAIVSFS*YTLGPVPVVSRLMM Trigger: CATCATCAAACGAGAGACAACAGGCACGGGTCCCAACGTGTACCACGAGAACGACACAATAGCGAAGTATGAGATCATGGACGGGGCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS-3UTR CAA 90 bp | CAGAAGACAAGGAGTAGGACAAACTGCTTTAGGAGGCAAGTGGAGCCCAGCCTCTCTTTAACAACATCATaGAGGCGGCGGCTGATGGTG | + |
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Preference number: 5 (lower is better) Translates to: QKTRSRTNCFRRQVEPSLSLTTS*RRRLMV Trigger: CACCATCAGCCGCCGCCTCAATGATGTTGTTAAAGA...GAGGCTGGGCTCCACTTGCCTCCTAAAGCAGTTTGTCCTACTCCTTGTCTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS-3UTR CAA 90 bp | ACCTGTTCCCATGGGGATTGTATGTCACACCTAAACCTGGGGTTGTGCATGGAGATGCCAACTTCCATCTaGATGGATGAGTTCAGCTCG | + |
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Preference number: 5 (lower is better) Translates to: TCSHGDCMSHLNLGLCMEMPTSI*MDEFSS Trigger: CGAGCTGAACTCATCCATCAAGATGGAAGTTGGCAT...CTCCATGCACAACCCCAGGTTTAGGTGTGACATACAATCCCCATGGGAACAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS-3UTR CAA 90 bp | TGGGAACCTTCCCATACTTTCACAGTTGGCAGAGAAAGGAGAACGGGGGACAGGTCTATCTCCATGTGCTaGATCTTGATTCTCACCAGC | + |
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Preference number: 5 (lower is better) Translates to: WEPSHTFTVGRERRTGDRSISMC*ILILTS Trigger: GCTGGTGAGAATCAAGATCAAGCACATGGAGATAGA...CCTGTCCCCCGTTCTCCTTTCTCTGCCAACTGTGAAAGTATGGGAAGGTTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS TCA 90 bp | TCCATCTTGATGGATGAGTTCAGCTCGGGGTATGTGCTAAGTGTGTaGACTACAATGTCCATCTCTTTAACAACATCATTGAGGCGGCGG | + |
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Preference number: 5 (lower is better) Translates to: SILMDEFSSGYVLSV*TTMSISLTTSLRRR Trigger: CCGCCGCCTCAATGATGTTGTTAAAGAGATGGACATTGTAGTTCACACACTTAGCACATACCCCGAGCTGAACTCATCCATCAAGATGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS GCA 72 bp | GTTGGCCAGGGGTCCGCACCTCACCCAGGGAGGTTGTaGCCTCGAAGCGCTGTGAGGCAATGGCTGCCTGGT | + |
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Preference number: 6 (lower is better) Translates to: VGQGSAPHPGRL*PRSAVRQWLPG Trigger: ACCAGGCAGCCATTGCCTCACAGCGCTTCGAGGGCACAACCTCCCTGGGTGAGGTGCGGACCCCTGGCCAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CAA 72 bp | ACAGTTGGCCAGGGGTCCGCACCTCACCCAGGGAGGTaGTGCCCTCGAAGCGCTGTGAGGCAATGGCTGCCT | + |
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Preference number: 6 (lower is better) Translates to: TVGQGSAPHPGR*CPRSAVRQWLP Trigger: AGGCAGCCATTGCCTCACAGCGCTTCGAGGGCACAACCTCCCTGGGTGAGGTGCGGACCCCTGGCCAACTGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS TCA 72 bp | CACCTCACCCAGGGAGGTTGTGCCCTCGAAGCGCTGTaGGGCAATGGCTGCCTGGTGGGACATGCTCTTCCG | + |
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Preference number: 6 (lower is better) Translates to: HLTQGGCALEAL*GNGCLVGHALP Trigger: CGGAAGAGCATGTCCCACCAGGCAGCCATTGCCTCACAGCGCTTCGAGGGCACAACCTCCCTGGGTGAGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CAA 90 bp | TGTTGTCAGACAGTTGGCCAGGGGTCCGCACCTCACCCAGGGAGGTaGTGCCCTCGAAGCGCTGTGAGGCAATGGCTGCCTGGTGGGACA | + |
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Preference number: 6 (lower is better) Translates to: CCQTVGQGSAPHPGR*CPRSAVRQWLPGGT Trigger: TGTCCCACCAGGCAGCCATTGCCTCACAGCGCTTCGAGGGCACAACCTCCCTGGGTGAGGTGCGGACCCCTGGCCAACTGTCTGACAACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CCA 72 bp | GTGCCCTCGAAGCGCTGTGAGGCAATGGCTGCCTGGTaGGACATGCTCTTCCGTACGATGTCACCCTTCCGC | + |
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Preference number: 6 (lower is better) Translates to: VPSKRCEAMAAW*DMLFRTMSPFR Trigger: GCGGAAGGGTGACATCGTACGGAAGAGCATGTCCCACCAGGCAGCCATTGCCTCACAGCGCTTCGAGGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CCA 72 bp | CCAGGGAGGTTGTGCCCTCGAAGCGCTGTGAGGCAATaGCTGCCTGGTGGGACATGCTCTTCCGTACGATGT | + |
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Preference number: 6 (lower is better) Translates to: PGRLCPRSAVRQ*LPGGTCSSVRC Trigger: ACATCGTACGGAAGAGCATGTCCCACCAGGCAGCCATTGCCTCACAGCGCTTCGAGGGCACAACCTCCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS GCA 72 bp | CGAAGCGCTGTGAGGCAATGGCTGCCTGGTGGGACATaGTCTTCCGTACGATGTCACCCTTCCGCCACAACA | + |
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Preference number: 6 (lower is better) Translates to: RSAVRQWLPGGT*SSVRCHPSATT Trigger: TGTTGTGGCGGAAGGGTGACATCGTACGGAAGAGCATGTCCCACCAGGCAGCCATTGCCTCACAGCGCTTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CCA 72 bp | GTTGTGCCCTCGAAGCGCTGTGAGGCAATGGCTGCCTaGTGGGACATGCTCTTCCGTACGATGTCACCCTTC | + |
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Preference number: 6 (lower is better) Translates to: VVPSKRCEAMAA*WDMLFRTMSPF Trigger: GAAGGGTGACATCGTACGGAAGAGCATGTCCCACCAGGCAGCCATTGCCTCACAGCGCTTCGAGGGCACAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS GCA 72 bp | GGCTTTTCCACATGGGTGAACTCAAAGTCGAAGGCCTaGGATTGGGTGATCTCTCCTGGCCGAGCCAGGTCC | + |
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Preference number: 6 (lower is better) Translates to: GFSTWVNSKSKA*DWVISPGRARS Trigger: GGACCTGGCTCGGCCAGGAGAGATCACCCAATCGCAGGCCTTCGACTTTGAGTTCACCCATGTGGAAAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CCA 72 bp | TCCACATGGGTGAACTCAAAGTCGAAGGCCTGCGATTaGGTGATCTCTCCTGGCCGAGCCAGGTCCTTCACC | + |
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Preference number: 6 (lower is better) Translates to: STWVNSKSKACD*VISPGRARSFT Trigger: GGTGAAGGACCTGGCTCGGCCAGGAGAGATCACCCAATCGCAGGCCTTCGACTTTGAGTTCACCCATGTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CAA 72 bp | TTCCACATGGGTGAACTCAAAGTCGAAGGCCTGCGATaGGGTGATCTCTCCTGGCCGAGCCAGGTCCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: FHMGELKVEGLR*GDLSWPSQVLH Trigger: GTGAAGGACCTGGCTCGGCCAGGAGAGATCACCCAATCGCAGGCCTTCGACTTTGAGTTCACCCATGTGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS TCA 72 bp | TGGGGATGGACTCACCTCGGACTGGTGCCCCGTCCATaGTCTCATACTTCGCTATTGTGTCGTTCTCGTGGT | + |
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Preference number: 6 (lower is better) Translates to: WGWTHLGLVPRP*SHTSLLCRSRG Trigger: ACCACGAGAACGACACAATAGCGAAGTATGAGATCATGGACGGGGCACCAGTCCGAGGTGAGTCCATCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CAA 90 bp | ATACGGCTTTTCCACATGGGTGAACTCAAAGTCGAAGGCCTGCGATaGGGTGATCTCTCCTGGCCGAGCCAGGTCCTTCACCAAAGACAC | + |
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Preference number: 6 (lower is better) Translates to: IRLFHMGELKVEGLR*GDLSWPSQVLHQRH Trigger: GTGTCTTTGGTGAAGGACCTGGCTCGGCCAGGAGAGATCACCCAATCGCAGGCCTTCGACTTTGAGTTCACCCATGTGGAAAAGCCGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CAA 90 bp | TGCCCAATGAACTCGATCTTGATGCCCTGGTGCTCTAGTCGCTTGTaGGGGTTCTTCAGTGATAGGCTCACTTTCCCCGAGACGGTTTCC | + |
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Preference number: 6 (lower is better) Translates to: CPMNSILMPWCSSRL*GFFSDRLTFPETVS Trigger: GGAAACCGTCTCGGGGAAAGTGAGCCTATCACTGAAGAACCCCAACAAGCGACTAGAGCACCAGGGCATCAAGATCGAGTTCATTGGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CAA 72 bp | AACTCGATCTTGATGCCCTGGTGCTCTAGTCGCTTGTaGGGGTTCTTCAGTGATAGGCTCACTTTCCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: NSILMPWCSSRL*GFFSDRLTFPE Trigger: CTCGGGGAAAGTGAGCCTATCACTGAAGAACCCCAACAAGCGACTAGAGCACCAGGGCATCAAGATCGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CAA 90 bp | ATCTGCCCAATGAACTCGATCTTGATGCCCTGGTGCTCTAGTCGCTaGTTGGGGTTCTTCAGTGATAGGCTCACTTTCCCCGAGACGGTT | + |
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Preference number: 6 (lower is better) Translates to: ICPMNSILMPWCSSR*LGFFSDRLTFPETV Trigger: AACCGTCTCGGGGAAAGTGAGCCTATCACTGAAGAACCCCAACAAGCGACTAGAGCACCAGGGCATCAAGATCGAGTTCATTGGGCAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS GCA 72 bp | TCGATCTGCCCAATGAACTCGATCTTGATGCCCTGGTaGTCTAGTCGCTTGTTGGGGTTCTTCAGTGATAGG | + |
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Preference number: 6 (lower is better) Translates to: SICPMNSILMPW*SSRLLGFFSDR Trigger: CCTATCACTGAAGAACCCCAACAAGCGACTAGAGCACCAGGGCATCAAGATCGAGTTCATTGGGCAGATCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CCA 72 bp | TCCATGATCTCATACTTCGCTATTGTGTCGTTCTCGTaGTACACGTTGGGACCCGTGCCTGTTGTCTCTCGT | + |
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Preference number: 6 (lower is better) Translates to: SMISYFAIVSFS*YTLGPVPVVSR Trigger: ACGAGAGACAACAGGCACGGGTCCCAACGTGTACCACGAGAACGACACAATAGCGAAGTATGAGATCATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CAA 72 bp | ATGAACTCGATCTTGATGCCCTGGTGCTCTAGTCGCTaGTTGGGGTTCTTCAGTGATAGGCTCACTTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: MNSILMPWCSSR*LGFFSDRLTFP Trigger: GGGGAAAGTGAGCCTATCACTGAAGAACCCCAACAAGCGACTAGAGCACCAGGGCATCAAGATCGAGTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CAA 90 bp | TCGTTCTCGTGGTACACGTTGGGACCCGTGCCTGTTGTCTCTCGTTaGATGATGTCTATCTCCATGTGCTTGATCTTGATTCTCACCAGC | + |
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Preference number: 6 (lower is better) Translates to: SFSWYTLGPVPVVSR*MMSISMCLILILTS Trigger: GCTGGTGAGAATCAAGATCAAGCACATGGAGATAGACATCATCAAACGAGAGACAACAGGCACGGGTCCCAACGTGTACCACGAGAACGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CCA 72 bp | AGTTCGATCTGCCCAATGAACTCGATCTTGATGCCCTaGTGCTCTAGTCGCTTGTTGGGGTTCTTCAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: SSICPMNSILMP*CSSRLLGFFSD Trigger: ATCACTGAAGAACCCCAACAAGCGACTAGAGCACCAGGGCATCAAGATCGAGTTCATTGGGCAGATCGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CAA 90 bp | TCCATGATCTCATACTTCGCTATTGTGTCGTTCTCGTGGTACACGTaGGGACCCGTGCCTGTTGTCTCTCGTTTGATGATGTCTATCTCC | + |
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Preference number: 6 (lower is better) Translates to: SMISYFAIVSFSWYT*GPVPVVSRLMMSIS Trigger: GGAGATAGACATCATCAAACGAGAGACAACAGGCACGGGTCCCAACGTGTACCACGAGAACGACACAATAGCGAAGTATGAGATCATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CAA 72 bp | TCAATGTGCAGGCAATCCTCAATGCCAACTTCCATCTaGATGGATGAGTTCAGCTCGGGGTATGTGCTAAGT | + |
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Preference number: 6 (lower is better) Translates to: SMCRQSSMPTSI*MDEFSSGYVLS Trigger: ACTTAGCACATACCCCGAGCTGAACTCATCCATCAAGATGGAAGTTGGCATTGAGGATTGCCTGCACATTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CAA 72 bp | TGGTACACGTTGGGACCCGTGCCTGTTGTCTCTCGTTaGATGATGTCTATCTCCATGTGCTTGATCTTGATT | + |
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Preference number: 6 (lower is better) Translates to: WYTLGPVPVVSR*MMSISMCLILI Trigger: AATCAAGATCAAGCACATGGAGATAGACATCATCAAACGAGAGACAACAGGCACGGGTCCCAACGTGTACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS TCA 72 bp | AGTAGCGCCGTTCCTCCTCATCTATCAGCACCAAGTTaGGGTAATAGCGCACAGAGAACTTCTTATTTATGT | + |
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Preference number: 6 (lower is better) Translates to: SSAVPPHLSAPS*GNSAQRTSYLC Trigger: ACATAAATAAGAAGTTCTCTGTGCGCTATTACCTCAACTTGGTGCTGATAGATGAGGAGGAACGGCGCTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS GCA 72 bp | CCTGTTGTCTCTCGTTTGATGATGTCTATCTCCATGTaGTTGATCTTGATTCTCACCAGCAGGAAGTATATC | + |
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Preference number: 6 (lower is better) Translates to: PVVSRLMMSISM*LILILTSRKYI Trigger: GATATACTTCCTGCTGGTGAGAATCAAGATCAAGCACATGGAGATAGACATCATCAAACGAGAGACAACAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS TCA 72 bp | ATGGATGAGTTCAGCTCGGGGTATGTGCTAAGTGTGTaGACTACAATGTCCATCTCTTTAACAACATCATTG | + |
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Preference number: 6 (lower is better) Translates to: MDEFSSGYVLSV*TTMSISLTTSL Trigger: CAATGATGTTGTTAAAGAGATGGACATTGTAGTTCACACACTTAGCACATACCCCGAGCTGAACTCATCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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| CDS CAA 72 bp | GTTGTCTCTCGTTTGATGATGTCTATCTCCATGTGCTaGATCTTGATTCTCACCAGCAGGAAGTATATCTTC | + |
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Preference number: 6 (lower is better) Translates to: VVSRLMMSISMC*ILILTSRKYIF Trigger: GAAGATATACTTCCTGCTGGTGAGAATCAAGATCAAGCACATGGAGATAGACATCATCAAACGAGAGACAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034470.11 |
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