Pregenerated sensors for VPS26A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020078Ensembl transcript IDs: ENSMUST00000092473.5, ENSMUST00000105447.11, ENSMUST00000219574.2
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGTTGGGATGTCCGCACGCTGCGACTGTCGTCAGCCAGCTGAGCTaGTCTCTTGGCCCGGTTCTTGCACTTGCTGCTCTGCCCACCTGC | + |
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Preference number: 1 (lower is better) Translates to: ELGCPHAATVVSQLS*SLGPVLALAALPTC Trigger: GCAGGTGGGCAGAGCAGCAAGTGCAAGAACCGGGCCAAGAGAGCAGCTCAGCTGGCTGACGACAGTCGCAGCGTGCGGACATCCCAACTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR TCA 90 bp | ACGTGGAGTTGGGATGTCCGCACGCTGCGACTGTCGTCAGCCAGCTaGGCTGCTCTCTTGGCCCGGTTCTTGCACTTGCTGCTCTGCCCA | + |
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Preference number: 1 (lower is better) Translates to: TWSWDVRTLRLSSAS*AALLARFLHLLLCP Trigger: TGGGCAGAGCAGCAAGTGCAAGAACCGGGCCAAGAGAGCAGCTCAGCTGGCTGACGACAGTCGCAGCGTGCGGACATCCCAACTCCACGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR GCA 90 bp | CGTCAGCCAGCTGAGCTGCTCTCTTGGCCCGGTTCTTGCACTTGCTaGTCTGCCCACCTGCTTACATCTCAGGCTGCTCCGCAGAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: RQPAELLSWPGSCTC*SAHLLTSQAAPQRP Trigger: AGGCCTCTGCGGAGCAGCCTGAGATGTAAGCAGGTGGGCAGAGCAGCAAGTGCAAGAACCGGGCCAAGAGAGCAGCTCAGCTGGCTGACG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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| 3UTR GCA 90 bp | AGCTGCTCTCTTGGCCCGGTTCTTGCACTTGCTGCTCTGCCCACCTaGTTACATCTCAGGCTGCTCCGCAGAGGCCTGCGAGTCTGGAGA | + |
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Preference number: 1 (lower is better) Translates to: SCSLGPVLALAALPT*LHLRLLRRGLRVWR Trigger: TCTCCAGACTCGCAGGCCTCTGCGGAGCAGCCTGAGATGTAAGCAGGTGGGCAGAGCAGCAAGTGCAAGAACCGGGCCAAGAGAGCAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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| 3UTR GCA 90 bp | TGTCGTCAGCCAGCTGAGCTGCTCTCTTGGCCCGGTTCTTGCACTTaGTGCTCTGCCCACCTGCTTACATCTCAGGCTGCTCCGCAGAGG | + |
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Preference number: 1 (lower is better) Translates to: CRQPAELLSWPGSCT*CSAHLLTSQAAPQR Trigger: CCTCTGCGGAGCAGCCTGAGATGTAAGCAGGTGGGCAGAGCAGCAAGTGCAAGAACCGGGCCAAGAGAGCAGCTCAGCTGGCTGACGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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| 3UTR CCA 90 bp | ATGTCCGCACGCTGCGACTGTCGTCAGCCAGCTGAGCTGCTCTCTTaGCCCGGTTCTTGCACTTGCTGCTCTGCCCACCTGCTTACATCT | + |
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Preference number: 1 (lower is better) Translates to: MSARCDCRQPAELLS*PGSCTCCSAHLLTS Trigger: AGATGTAAGCAGGTGGGCAGAGCAGCAAGTGCAAGAACCGGGCCAAGAGAGCAGCTCAGCTGGCTGACGACAGTCGCAGCGTGCGGACAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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| 3UTR GCA 90 bp | AGGATAAGGAAGACTAGCAGACGTGGAGTTGGGATGTCCGCACGCTaGGACTGTCGTCAGCCAGCTGAGCTGCTCTCTTGGCCCGGTTCT | + |
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Preference number: 1 (lower is better) Translates to: RIRKTSRRGVGMSAR*DCRQPAELLSWPGS Trigger: AGAACCGGGCCAAGAGAGCAGCTCAGCTGGCTGACGACAGTCGCAGCGTGCGGACATCCCAACTCCACGTCTGCTAGTCTTCCTTATCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR CCA 90 bp | TGGCCGTCCTTAGAAACCCACATTGACAATAGCTGCTCCAGGACGTaGTATGTGAACCTTTGGCCAGGGCTGGTTGCTGGCCATTTTATC | + |
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Preference number: 1 (lower is better) Translates to: WPSLETHIDNSCSRT*YVNLWPGLVAGHFI Trigger: GATAAAATGGCCAGCAACCAGCCCTGGCCAAAGGTTCACATACCACGTCCTGGAGCAGCTATTGTCAATGTGGGTTTCTAAGGACGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR CCA 90 bp | GTAAAGTTAACTGACAAACCTGTACTGAGGTGTATCAAGGAACACTaGTACAGAAACCAACAAGCCCTGAGTGAGAGTGGCCCCCACACA | + |
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Preference number: 1 (lower is better) Translates to: VKLTDKPVLRCIKEH*YRNQQALSESGPHT Trigger: TGTGTGGGGGCCACTCTCACTCAGGGCTTGTTGGTTTCTGTACCAGTGTTCCTTGATACACCTCAGTACAGGTTTGTCAGTTAACTTTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR CCA 90 bp | GTCAATAAGGGGCAAGAGGGCCACGATGACAAACCATGTCATCCCTaGGGTGACAATCTTTCATATACCTCAGAGATCCCAAAGATTAAA | + |
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Preference number: 1 (lower is better) Translates to: VNKGQEGHDDKPCHP*GDNLSYTSEIPKIK Trigger: TTTAATCTTTGGGATCTCTGAGGTATATGAAAGATTGTCACCCCAGGGATGACATGGTTTGTCATCGTGGCCCTCTTGCCCCTTATTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR CCA 90 bp | AATATTCCAGTTAACAAGAAATTGTCCGGCTATGGACACTTCGGCTaGTTCTCCCAAGCTCTCTCATTCCTAGGTGACGATTTGCATACA | + |
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Preference number: 1 (lower is better) Translates to: NIPVNKKLSGYGHFG*FSQALSFLGDDLHT Trigger: TGTATGCAAATCGTCACCTAGGAATGAGAGAGCTTGGGAGAACCAGCCGAAGTGTCCATAGCCGGACAATTTCTTGTTAACTGGAATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCTTCCTCCTGCCCCATACGCCTCAGTTGTGTGTCTGTGCTCAGCTGACTGCGTCAGCCAGCTGAGCTaGTCTCTTGGCCCGGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: RLPPAPYASVVCLCSADCVSQLS*SLGPVL Trigger: AAGAACCGGGCCAAGAGAGCAGCTCAGCTGGCTGAC...GCAGTCAGCTGAGCACAGACACACAACTGAGGCGTATGGGGCAGGAGGAAGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCTTCCTCCTGCCCCATACGCCTCAGTTGTGTGTCTGTGCTCAGCTGACTGCGATTCAAACCGCTGGTaGAAGTTCGTCCTCTGTTTT | + |
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Preference number: 2 (lower is better) Translates to: RLPPAPYASVVCLCSADCDSNRW*KFVLCF Trigger: AAAACAGAGGACGAACTTTCACCAGCGGTTTGAATC...GCAGTCAGCTGAGCACAGACACACAACTGAGGCGTATGGGGCAGGAGGAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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| 3UTR-3UTR GCA 90 bp | TACGCCTCAGTTGTGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAAGTCAGCCAGCTGAGCTaGTCTCTTGGCCCGGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: YASVVCLCSADCSLLFREVSQLS*SLGPVL Trigger: AAGAACCGGGCCAAGAGAGCAGCTCAGCTGGCTGAC...TTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACACAACTGAGGCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR GCA 90 bp | TACGCCTCAGTTGTGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAAGCTGCTCTGCCCACCTaGTTACATCTCAGGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: YASVVCLCSADCSLLFREAALPT*LHLRLL Trigger: GAGCAGCCTGAGATGTAAGCAGGTGGGCAGAGCAGC...TTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACACAACTGAGGCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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| 3UTR-3UTR TCA 90 bp | AGGCTTCCTCCTGCCCCATACGCCTCAGTTGTGTGTCTGTGCTCAGCTGACTGCATTGGCACCGATGTATaGCTCATATGGCTTTTCAAC | + |
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Preference number: 2 (lower is better) Translates to: RLPPAPYASVVCLCSADCIGTDV*LIWLFN Trigger: GTTGAAAAGCCATATGAGTCATACATCGGTGCCAAT...GCAGTCAGCTGAGCACAGACACACAACTGAGGCGTATGGGGCAGGAGGAAGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAATGGTATGAATTTACCAACAAGCCCTGAGTaGGAGTGGCCCCCACACAGG | + |
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Preference number: 2 (lower is better) Translates to: CVCAQLTAAFFSENGMNLPTSPE*EWPPHR Trigger: CCTGTGTGGGGGCCACTCTCACTCAGGGCTTGTTGG...TAAATTCATACCATTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR TCA 90 bp | TACGCCTCAGTTGTGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAAGAACAGGCACTTACATaGAGGAGAACATGGCCGTCC | + |
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Preference number: 2 (lower is better) Translates to: YASVVCLCSADCSLLFREEQALT*RRTWPS Trigger: GGACGGCCATGTTCTCCTTCATGTAAGTGCCTGTTC...TTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACACAACTGAGGCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR CCA 90 bp | TACGCCTCAGTTGTGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAAGCCAGGGCTGGTTGCTaGCCATTTTATCAAAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: YASVVCLCSADCSLLFREARAGC*PFYQSA Trigger: GGCACTTTGATAAAATGGCCAGCAACCAGCCCTGGC...TTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACACAACTGAGGCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTTGGCCAGGGCTGGTTGCTGGCCATTTTATCAAAGTGCCATCATAGTAAAAGCAAGAGGGCCACGATaGCAAACCATGTCATCCCTG | + |
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Preference number: 2 (lower is better) Translates to: PLARAGCWPFYQSAIIVKARGPR*QTMSSL Trigger: CAGGGATGACATGGTTTGTCATCGTGGCCCTCTTGC...TTTTACTATGATGGCACTTTGATAAAATGGCCAGCAACCAGCCCTGGCCAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCAGGAGGCTGTGAATGGTAGACCCAGAAGTGCCTACCATGTAACACCAGGTAGGATGATCTCCTGCTaGTTGAAGTACCTTCGGTCC | + |
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Preference number: 2 (lower is better) Translates to: IQEAVNGRPRSAYHVTPGRMISC*LKYLRS Trigger: GGACCGAAGGTACTTCAAGCAGCAGGAGATCATCCT...ACCTGGTGTTACATGGTAGGCACTTCTGGGTCTACCATTCACAGCCTCCTGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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| 3UTR-3UTR GCA 90 bp | TACATGATGATACAGAAAGTCATAGCAAACGTGGTCAATAAGGGGCAAGAGGGCCCCGGTTCTTGCACTTaGTGCTCTGCCCACCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: YMMIQKVIANVVNKGQEGPGSCT*CSAHLL Trigger: AAGCAGGTGGGCAGAGCAGCAAGTGCAAGAACCGGG...GCCCTCTTGCCCCTTATTGACCACGTTTGCTATGACTTTCTGTATCATCATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCAATGTGTCAACTCCACACTGCAGAACCTACATGATGATACAGAAAGTCATGTCAGCCAGCTGAGCTaGTCTCTTGGCCCGGTTCTT | + |
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Preference number: 2 (lower is better) Translates to: CQCVNSTLQNLHDDTESHVSQLS*SLGPVL Trigger: AAGAACCGGGCCAAGAGAGCAGCTCAGCTGGCTGAC...ATGACTTTCTGTATCATCATGTAGGTTCTGCAGTGTGGAGTTGACACATTGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR GCA 90 bp | TACGCCTCAGTTGTGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAATTGGCCAGGGCTGGTTaGTGGCCATTTTATCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: YASVVCLCSADCSLLFRELARAG*WPFYQS Trigger: ACTTTGATAAAATGGCCAGCAACCAGCCCTGGCCAA...TTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACACAACTGAGGCGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCAATGTGTCAACTCCACACTGCAGAACCTACATGATGATACAGAAAGTCATGCAAGAGGGCCACGATaGCAAACCATGTCATCCCTG | + |
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Preference number: 2 (lower is better) Translates to: CQCVNSTLQNLHDDTESHARGPR*QTMSSL Trigger: CAGGGATGACATGGTTTGTCATCGTGGCCCTCTTGC...ATGACTTTCTGTATCATCATGTAGGTTCTGCAGTGTGGAGTTGACACATTGGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR CCA 90 bp | CCAATATTCCAGTTAACAAGAAATTGTCCGGCTATGGACACTTCGGCTGGTTCTGCCAGGGCTGGTTGCTaGCCATTTTATCAAAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: PIFQLTRNCPAMDTSAGSARAGC*PFYQSA Trigger: GGCACTTTGATAAAATGGCCAGCAACCAGCCCTGGC...AGAACCAGCCGAAGTGTCCATAGCCGGACAATTTCTTGTTAACTGGAATATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR CCA 90 bp | CCAATATTCCAGTTAACAAGAAATTGTCCGGCTATGGACACTTCGGCTGGTTCTTCACATCTCTCATCGTaGGGGTTGGGTCATACCCTG | + |
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Preference number: 2 (lower is better) Translates to: PIFQLTRNCPAMDTSAGSSHLSS*GLGHTL Trigger: CAGGGTATGACCCAACCCCCACGATGAGAGATGTGA...AGAACCAGCCGAAGTGTCCATAGCCGGACAATTTCTTGTTAACTGGAATATTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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| 3UTR-3UTR CCA 90 bp | TACATGATGATACAGAAAGTCATAGCAAACGTGGTCAATAAGGGGCAAGAGGGCTATGGACACTTCGGCTaGTTCTCCCAAGCTCTCTCA | + |
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Preference number: 2 (lower is better) Translates to: YMMIQKVIANVVNKGQEGYGHFG*FSQALS Trigger: TGAGAGAGCTTGGGAGAACCAGCCGAAGTGTCCATA...GCCCTCTTGCCCCTTATTGACCACGTTTGCTATGACTTTCTGTATCATCATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR TCA 90 bp | TACGCCTCAGTTGTGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAAATTACATCCTTTAAATaGTACCTCAGGCGGACATTG | + |
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Preference number: 2 (lower is better) Translates to: YASVVCLCSADCSLLFREITSFK*YLRRTL Trigger: CAATGTCCGCCTGAGGTATCATTTAAAGGATGTAAT...TTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACACAACTGAGGCGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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| 3UTR-3UTR GCA 90 bp | TACGCCTCAGTTGTGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAAGTAGGACATAAGGGCTaGTCAGGTTTTTCTCATTTT | + |
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Preference number: 2 (lower is better) Translates to: YASVVCLCSADCSLLFREVGHKG*SGFSHF Trigger: AAAATGAGAAAAACCTGAGCAGCCCTTATGTCCTAC...TTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACACAACTGAGGCGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR GCA 90 bp | TACATGATGATACAGAAAGTCATAGCAAACGTGGTCAATAAGGGGCAAGAGGGCCTGTGCTCAGCTGACTaGAGCCTTCTTTTCAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: YMMIQKVIANVVNKGQEGLCSAD*SLLFRE Trigger: TTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAG...GCCCTCTTGCCCCTTATTGACCACGTTTGCTATGACTTTCTGTATCATCATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR GCA 90 bp | CCTTTGGCCAGGGCTGGTTGCTGGCCATTTTATCAAAGTGCCATCATAGTAAAATCTCAGTTTCTCGGGTaGTTTTCTCCACAGGATGAT | + |
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Preference number: 2 (lower is better) Translates to: PLARAGCWPFYQSAIIVKSQFLG*FSPQDD Trigger: ATCATCCTGTGGAGAAAAGCACCCGAGAAACTGAGA...TTTTACTATGATGGCACTTTGATAAAATGGCCAGCAACCAGCCCTGGCCAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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| 3UTR-3UTR TCA 90 bp | TACATGATGATACAGAAAGTCATAGCAAACGTGGTCAATAAGGGGCAAGAGGGCCTGACAAACCTGTACTaGGGTGTATCAAGGAACACT | + |
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Preference number: 2 (lower is better) Translates to: YMMIQKVIANVVNKGQEGLTNLY*GVSRNT Trigger: AGTGTTCCTTGATACACCTCAGTACAGGTTTGTCAG...GCCCTCTTGCCCCTTATTGACCACGTTTGCTATGACTTTCTGTATCATCATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR GCA 90 bp | GGTAGACCCAGAAGTGCCTACCATGTAACACCAGGTTGGTTTCTGATCCACATGGTTTATGCTTCTGAGTaGTTATCAGTGTGCAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: GRPRSAYHVTPGWFLIHMVYASE*LSVCSK Trigger: TTTACTGCACACTGATAAGCACTCAGAAGCATAAAC...CATGTGGATCAGAAACCAACCTGGTGTTACATGGTAGGCACTTCTGGGTCTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCAATGTGTCAACTCCACACTGCAGAACCTACATGATGATACAGAAAGTCATCTGTGCTCAGCTGACTaGAGCCTTCTTTTCAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: CQCVNSTLQNLHDDTESHLCSAD*SLLFRE Trigger: TTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAG...ATGACTTTCTGTATCATCATGTAGGTTCTGCAGTGTGGAGTTGACACATTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAATGGTATGAATTTATTTCTGTCTCTGTTGTaGTGCTGGGTCCAATTCCTG | + |
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Preference number: 2 (lower is better) Translates to: CVCAQLTAAFFSENGMNLFLSLL*CWVQFL Trigger: CAGGAATTGGACCCAGCACCACAACAGAGACAGAAA...TAAATTCATACCATTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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| 3UTR-3UTR TCA 90 bp | CCAATATTCCAGTTAACAAGAAATTGTCCGGCTATGGACACTTCGGCTGGTTCTGGCATTTTGAAACTTTaGGACTCTGAACAGGCACTT | + |
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Preference number: 2 (lower is better) Translates to: PIFQLTRNCPAMDTSAGSGILKL*DSEQAL Trigger: AAGTGCCTGTTCAGAGTCTCAAAGTTTCAAAATGCC...AGAACCAGCCGAAGTGTCCATAGCCGGACAATTTCTTGTTAACTGGAATATTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR CCA 90 bp | CCTTTGGCCAGGGCTGGTTGCTGGCCATTTTATCAAAGTGCCATCATAGTAAAAAAACCATGTCATCCCTaGGGTGACAATCTTTCATAT | + |
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Preference number: 2 (lower is better) Translates to: PLARAGCWPFYQSAIIVKKPCHP*GDNLSY Trigger: ATATGAAAGATTGTCACCCCAGGGATGACATGGTTT...TTTTACTATGATGGCACTTTGATAAAATGGCCAGCAACCAGCCCTGGCCAAAGG 43% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAATGGTATGAATTTAGAAACTTTGAGACTCTaGACAGGCACTTACATGAAG | + |
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Preference number: 2 (lower is better) Translates to: CVCAQLTAAFFSENGMNLETLRL*TGTYMK Trigger: CTTCATGTAAGTGCCTGTTCAGAGTCTCAAAGTTTC...TAAATTCATACCATTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR GCA 90 bp | CCAATATTCCAGTTAACAAGAAATTGTCCGGCTATGGACACTTCGGCTGGTTCTGTAGGACATAAGGGCTaGTCAGGTTTTTCTCATTTT | + |
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Preference number: 2 (lower is better) Translates to: PIFQLTRNCPAMDTSAGSVGHKG*SGFSHF Trigger: AAAATGAGAAAAACCTGAGCAGCCCTTATGTCCTAC...AGAACCAGCCGAAGTGTCCATAGCCGGACAATTTCTTGTTAACTGGAATATTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCAATGTGTCAACTCCACACTGCAGAACCTACATGATGATACAGAAAGTCATGTTTATGCTTCTGAGTaGTTATCAGTGTGCAGTAAA | + |
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Preference number: 2 (lower is better) Translates to: CQCVNSTLQNLHDDTESHVYASE*LSVCSK Trigger: TTTACTGCACACTGATAAGCACTCAGAAGCATAAAC...ATGACTTTCTGTATCATCATGTAGGTTCTGCAGTGTGGAGTTGACACATTGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR GCA 72 bp | GCTGAGCTGCTCTCTTGGCCCGGTTCTTGCACTTGCTaGTCTGCCCACCTGCTTACATCTCAGGCTGCTCCG | + |
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Preference number: 3 (lower is better) Translates to: AELLSWPGSCTC*SAHLLTSQAAP Trigger: CGGAGCAGCCTGAGATGTAAGCAGGTGGGCAGAGCAGCAAGTGCAAGAACCGGGCCAAGAGAGCAGCTCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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| 3UTR-3UTR CAA 90 bp | TACGCCTCAGTTGTGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAACTCTTGGCCCGGTTCTaGCACTTGCTGCTCTGCCCA | + |
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Preference number: 3 (lower is better) Translates to: YASVVCLCSADCSLLFRELLARF*HLLLCP Trigger: TGGGCAGAGCAGCAAGTGCAAGAACCGGGCCAAGAG...TTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACACAACTGAGGCGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR CAA 90 bp | TACGCCTCAGTTGTGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAACCCCATACGCCTCAGTaGTGTGTCTGTGCTCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: YASVVCLCSADCSLLFREPHTPQ*CVCAQL Trigger: CAGCTGAGCACAGACACACAACTGAGGCGTATGGGG...TTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACACAACTGAGGCGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR TCA 72 bp | CCCACATTGACAATAGCTGCTCCAGGACGTGGTATGTaGACCTTTGGCCAGGGCTGGTTGCTGGCCATTTTA | + |
|
Preference number: 3 (lower is better) Translates to: PTLTIAAPGRGM*TFGQGWLLAIL Trigger: TAAAATGGCCAGCAACCAGCCCTGGCCAAAGGTTCACATACCACGTCCTGGAGCAGCTATTGTCAATGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR CCA 72 bp | TTAGAAACCCACATTGACAATAGCTGCTCCAGGACGTaGTATGTGAACCTTTGGCCAGGGCTGGTTGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LETHIDNSCSRT*YVNLWPGLVAG Trigger: GCCAGCAACCAGCCCTGGCCAAAGGTTCACATACCACGTCCTGGAGCAGCTATTGTCAATGTGGGTTTCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR CAA 90 bp | CCTTTGGCCAGGGCTGGTTGCTGGCCATTTTATCAAAGTGCCATCATAGTAAAACTCTTGGCCCGGTTCTaGCACTTGCTGCTCTGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: PLARAGCWPFYQSAIIVKLLARF*HLLLCP Trigger: TGGGCAGAGCAGCAAGTGCAAGAACCGGGCCAAGAG...TTTTACTATGATGGCACTTTGATAAAATGGCCAGCAACCAGCCCTGGCCAAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR CAA 90 bp | GGTAGACCCAGAAGTGCCTACCATGTAACACCAGGTTGGTTTCTGATCCACATGTACCTCAGGCGGACATaGGCACCGATGTATGACTCA | + |
|
Preference number: 3 (lower is better) Translates to: GRPRSAYHVTPGWFLIHMYLRRT*APMYDS Trigger: TGAGTCATACATCGGTGCCAATGTCCGCCTGAGGTA...CATGTGGATCAGAAACCAACCTGGTGTTACATGGTAGGCACTTCTGGGTCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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| 3UTR-3UTR CAA 90 bp | GGTAGACCCAGAAGTGCCTACCATGTAACACCAGGTTGGTTTCTGATCCACATGATGATCTCCTGCTGCTaGAAGTACCTTCGGTCCTCC | + |
|
Preference number: 3 (lower is better) Translates to: GRPRSAYHVTPGWFLIHMMISCC*KYLRSS Trigger: GGAGGACCGAAGGTACTTCAAGCAGCAGGAGATCAT...CATGTGGATCAGAAACCAACCTGGTGTTACATGGTAGGCACTTCTGGGTCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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| 3UTR CCA 72 bp | GGGCAAGAGGGCCACGATGACAAACCATGTCATCCCTaGGGTGACAATCTTTCATATACCTCAGAGATCCCA | + |
|
Preference number: 3 (lower is better) Translates to: GQEGHDDKPCHP*GDNLSYTSEIP Trigger: TGGGATCTCTGAGGTATATGAAAGATTGTCACCCCAGGGATGACATGGTTTGTCATCGTGGCCCTCTTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR CCA 72 bp | GACAATAGCTGCTCCAGGACGTGGTATGTGAACCTTTaGCCAGGGCTGGTTGCTGGCCATTTTATCAAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: DNSCSRTWYVNL*PGLVAGHFIKV Trigger: CACTTTGATAAAATGGCCAGCAACCAGCCCTGGCCAAAGGTTCACATACCACGTCCTGGAGCAGCTATTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR CAA 90 bp | CCAATATTCCAGTTAACAAGAAATTGTCCGGCTATGGACACTTCGGCTGGTTCTCCCCATACGCCTCAGTaGTGTGTCTGTGCTCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: PIFQLTRNCPAMDTSAGSPHTPQ*CVCAQL Trigger: CAGCTGAGCACAGACACACAACTGAGGCGTATGGGG...AGAACCAGCCGAAGTGTCCATAGCCGGACAATTTCTTGTTAACTGGAATATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCAGGAGGCTGTGAATGGTAGACCCAGAAGTGCCTACCATGTAACACCAGGTTTGTTTCTGTCTCTGTaGTGGTGCTGGGTCCAATTC | + |
|
Preference number: 3 (lower is better) Translates to: IQEAVNGRPRSAYHVTPGLFLSL*WCWVQF Trigger: GAATTGGACCCAGCACCACAACAGAGACAGAAACAA...ACCTGGTGTTACATGGTAGGCACTTCTGGGTCTACCATTCACAGCCTCCTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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| 3UTR CCA 72 bp | GTTAACAAGAAATTGTCCGGCTATGGACACTTCGGCTaGTTCTCCCAAGCTCTCTCATTCCTAGGTGACGAT | + |
|
Preference number: 3 (lower is better) Translates to: VNKKLSGYGHFG*FSQALSFLGDD Trigger: ATCGTCACCTAGGAATGAGAGAGCTTGGGAGAACCAGCCGAAGTGTCCATAGCCGGACAATTTCTTGTTAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR CCA 72 bp | ACTGACAAACCTGTACTGAGGTGTATCAAGGAACACTaGTACAGAAACCAACAAGCCCTGAGTGAGAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: TDKPVLRCIKEH*YRNQQALSESG Trigger: GCCACTCTCACTCAGGGCTTGTTGGTTTCTGTACCAGTGTTCCTTGATACACCTCAGTACAGGTTTGTCAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| 3UTR GCA 72 bp | CAGGACGTGGTATGTGAACCTTTGGCCAGGGCTGGTTaGTGGCCATTTTATCAAAGTGCCATCATAGTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QDVVCEPLARAG*WPFYQSAIIVK Trigger: TTTTACTATGATGGCACTTTGATAAAATGGCCAGCAACCAGCCCTGGCCAAAGGTTCACATACCACGTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| CDS-3UTR CCA 90 bp | CACGCTGCGACTGTCGTCAGCCAGCTGAGCTGCTCTCTTGGCCCGGTTCTTGCACTCCAAGAAAACTCTTaGAAGGCGAGGCTGCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HAATVVSQLSCSLGPVLALQENS*KARLPS Trigger: GCTCGGCAGCCTCGCCTTCCAAGAGTTTTCTTGGAG...TGCAAGAACCGGGCCAAGAGAGCAGCTCAGCTGGCTGACGACAGTCGCAGCGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092473.5 |
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| CDS-3UTR GCA 90 bp | ATTCAGGAGGCTGTGAATGGTAGACCCAGAAGTGCCTACCATGTAACACCAGGTCTTGGAAGGCGAGGCTaGCGAGCTCCGGCTGGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: IQEAVNGRPRSAYHVTPGLGRRG*RAPAGR Trigger: CCGCCCAGCCGGAGCTCGGCAGCCTCGCCTTCCAAG...ACCTGGTGTTACATGGTAGGCACTTCTGGGTCTACCATTCACAGCCTCCTGAAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092473.5 |
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| 3UTR CAA 72 bp | CCCCACACAGGCTTCCTCCTGCCCCATACGCCTCAGTaGTGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PHTGFLLPHTPQ*CVCAQLTAAFF Trigger: AAAGAAGGCTGCAGTCAGCTGAGCACAGACACACAACTGAGGCGTATGGGGCAGGAGGAAGCCTGTGTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 ENSMUST00000219574.2 |
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| CDS-3UTR GCA 90 bp | TACATGATGATACAGAAAGTCATAGCAAACGTGGTCAATAAGGGGCAAGAGGGCTGGGCGGGCTGCGGGTaGCCAGCCAGGGTCCCCACA | + |
|
Preference number: 4 (lower is better) Translates to: YMMIQKVIANVVNKGQEGWAGCG*PARVPT Trigger: TGTGGGGACCCTGGCTGGGCACCCGCAGCCCGCCCA...GCCCTCTTGCCCCTTATTGACCACGTTTGCTATGACTTTCTGTATCATCATGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092473.5 |
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| CDS-3UTR CCA 90 bp | AGGCTTCCTCCTGCCCCATACGCCTCAGTTGTGTGTCTGTGCTCAGCTGACTGCTCACATCTCTCATCGTaGGGGTTGGGTCATACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLPPAPYASVVCLCSADCSHLSS*GLGHTL Trigger: CAGGGTATGACCCAACCCCCACGATGAGAGATGTGA...GCAGTCAGCTGAGCACAGACACACAACTGAGGCGTATGGGGCAGGAGGAAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR GCA 90 bp | AGGCTTCCTCCTGCCCCATACGCCTCAGTTGTGTGTCTGTGCTCAGCTGACTGCTCTCAGTTTCTCGGGTaGTTTTCTCCACAGGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLPPAPYASVVCLCSADCSQFLG*FSPQDD Trigger: ATCATCCTGTGGAGAAAAGCACCCGAGAAACTGAGA...GCAGTCAGCTGAGCACAGACACACAACTGAGGCGTATGGGGCAGGAGGAAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR GCA 90 bp | GGTAGACCCAGAAGTGCCTACCATGTAACACCAGGTTGGTTTCTGATCCACATGCACAGGATGATCTCCTaGTGCTTGAAGTACCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GRPRSAYHVTPGWFLIHMHRMIS*CLKYLR Trigger: CCGAAGGTACTTCAAGCAGCAGGAGATCATCCTGTG...CATGTGGATCAGAAACCAACCTGGTGTTACATGGTAGGCACTTCTGGGTCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR GCA 90 bp | ATTCAGGAGGCTGTGAATGGTAGACCCAGAAGTGCCTACCATGTAACACCAGGTAGCCTCTTTCCAGGCTaGTTAAAGGCTAGGTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: IQEAVNGRPRSAYHVTPGSLFPG*LKARFT Trigger: GGTAAACCTAGCCTTTAAGCAGCCTGGAAAGAGGCT...ACCTGGTGTTACATGGTAGGCACTTCTGGGTCTACCATTCACAGCCTCCTGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR GCA 90 bp | CCTTTGGCCAGGGCTGGTTGCTGGCCATTTTATCAAAGTGCCATCATAGTAAAACACAGGATGATCTCCTaGTGCTTGAAGTACCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: PLARAGCWPFYQSAIIVKHRMIS*CLKYLR Trigger: CCGAAGGTACTTCAAGCAGCAGGAGATCATCCTGTG...TTTTACTATGATGGCACTTTGATAAAATGGCCAGCAACCAGCCCTGGCCAAAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR GCA 90 bp | TACGCCTCAGTTGTGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAATCTCAGTTTCTCGGGTaGTTTTCTCCACAGGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: YASVVCLCSADCSLLFRESQFLG*FSPQDD Trigger: ATCATCCTGTGGAGAAAAGCACCCGAGAAACTGAGA...TTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACACAACTGAGGCGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR TCA 90 bp | TACGCCTCAGTTGTGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAAATTGGCACCGATGTATaGCTCATATGGCTTTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: YASVVCLCSADCSLLFREIGTDV*LIWLFN Trigger: GTTGAAAAGCCATATGAGTCATACATCGGTGCCAAT...TTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACACAACTGAGGCGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR CCA 90 bp | TGCCAATGTGTCAACTCCACACTGCAGAACCTACATGATGATACAGAAAGTCATTCACATCTCTCATCGTaGGGGTTGGGTCATACCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CQCVNSTLQNLHDDTESHSHLSS*GLGHTL Trigger: CAGGGTATGACCCAACCCCCACGATGAGAGATGTGA...ATGACTTTCTGTATCATCATGTAGGTTCTGCAGTGTGGAGTTGACACATTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR TCA 90 bp | CCTTTGGCCAGGGCTGGTTGCTGGCCATTTTATCAAAGTGCCATCATAGTAAAAGATTCAAACCGCTGGTaGAAGTTCGTCCTCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLARAGCWPFYQSAIIVKDSNRW*KFVLCF Trigger: AAAACAGAGGACGAACTTTCACCAGCGGTTTGAATC...TTTTACTATGATGGCACTTTGATAAAATGGCCAGCAACCAGCCCTGGCCAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR GCA 90 bp | CCAATATTCCAGTTAACAAGAAATTGTCCGGCTATGGACACTTCGGCTGGTTCTAGCCTCTTTCCAGGCTaGTTAAAGGCTAGGTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: PIFQLTRNCPAMDTSAGSSLFPG*LKARFT Trigger: GGTAAACCTAGCCTTTAAGCAGCCTGGAAAGAGGCT...AGAACCAGCCGAAGTGTCCATAGCCGGACAATTTCTTGTTAACTGGAATATTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR CCA 90 bp | CCAATATTCCAGTTAACAAGAAATTGTCCGGCTATGGACACTTCGGCTGGTTCTTTTCTGTCTCTGTTGTaGTGCTGGGTCCAATTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PIFQLTRNCPAMDTSAGSFLSLL*CWVQFL Trigger: CAGGAATTGGACCCAGCACCACAACAGAGACAGAAA...AGAACCAGCCGAAGTGTCCATAGCCGGACAATTTCTTGTTAACTGGAATATTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR TCA 90 bp | TGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAATGGTATGAATTTAATTGGCACCGATGTATaGCTCATATGGCTTTTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CVCAQLTAAFFSENGMNLIGTDV*LIWLFN Trigger: GTTGAAAAGCCATATGAGTCATACATCGGTGCCAAT...TAAATTCATACCATTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR CAA 90 bp | CACGCTGCGACTGTCGTCAGCCAGCTGAGCTGCTCTCTTGGCCCGGTTCTTGCATACCTCAGGCGGACATaGGCACCGATGTATGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: HAATVVSQLSCSLGPVLAYLRRT*APMYDS Trigger: TGAGTCATACATCGGTGCCAATGTCCGCCTGAGGTA...TGCAAGAACCGGGCCAAGAGAGCAGCTCAGCTGGCTGACGACAGTCGCAGCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR CAA 90 bp | TGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAATGGTATGAATTTACCTCCAAGAAAACTCTaGGAAGGCGAGGCTGCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: CVCAQLTAAFFSENGMNLPPRKL*EGEAAE Trigger: CTCGGCAGCCTCGCCTTCCAAGAGTTTTCTTGGAGG...TAAATTCATACCATTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092473.5 |
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| CDS-3UTR CAA 90 bp | TACATGATGATACAGAAAGTCATAGCAAACGTGGTCAATAAGGGGCAAGAGGGCATGATCTCCTGCTGCTaGAAGTACCTTCGGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: YMMIQKVIANVVNKGQEGMISCC*KYLRSS Trigger: GGAGGACCGAAGGTACTTCAAGCAGCAGGAGATCAT...GCCCTCTTGCCCCTTATTGACCACGTTTGCTATGACTTTCTGTATCATCATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR CAA 90 bp | TGCCAATGTGTCAACTCCACACTGCAGAACCTACATGATGATACAGAAAGTCATTACCTCAGGCGGACATaGGCACCGATGTATGACTCA | + |
|
Preference number: 5 (lower is better) Translates to: CQCVNSTLQNLHDDTESHYLRRT*APMYDS Trigger: TGAGTCATACATCGGTGCCAATGTCCGCCTGAGGTA...ATGACTTTCTGTATCATCATGTAGGTTCTGCAGTGTGGAGTTGACACATTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR CAA 90 bp | TGCCAATGTGTCAACTCCACACTGCAGAACCTACATGATGATACAGAAAGTCATATGATCTCCTGCTGCTaGAAGTACCTTCGGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: CQCVNSTLQNLHDDTESHMISCC*KYLRSS Trigger: GGAGGACCGAAGGTACTTCAAGCAGCAGGAGATCAT...ATGACTTTCTGTATCATCATGTAGGTTCTGCAGTGTGGAGTTGACACATTGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR CAA 90 bp | TACATGATGATACAGAAAGTCATAGCAAACGTGGTCAATAAGGGGCAAGAGGGCTTGTTTCTGTCTCTGTaGTGGTGCTGGGTCCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: YMMIQKVIANVVNKGQEGLFLSL*WCWVQF Trigger: GAATTGGACCCAGCACCACAACAGAGACAGAAACAA...GCCCTCTTGCCCCTTATTGACCACGTTTGCTATGACTTTCTGTATCATCATGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR CAA 90 bp | TGCCAATGTGTCAACTCCACACTGCAGAACCTACATGATGATACAGAAAGTCATTTGTTTCTGTCTCTGTaGTGGTGCTGGGTCCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: CQCVNSTLQNLHDDTESHLFLSL*WCWVQF Trigger: GAATTGGACCCAGCACCACAACAGAGACAGAAACAA...ATGACTTTCTGTATCATCATGTAGGTTCTGCAGTGTGGAGTTGACACATTGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR CAA 90 bp | TGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAATGGTATGAATTTACTTACTGAAAACTTCTaGTTCACATCTCTCATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: CVCAQLTAAFFSENGMNLLTENF*FTSLIV Trigger: CACGATGAGAGATGTGAACAAGAAGTTTTCAGTAAG...TAAATTCATACCATTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000092473.5 ENSMUST00000105447.11 |
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| CDS-3UTR CAA 90 bp | TGTGTCTGTGCTCAGCTGACTGCAGCCTTCTTTTCAGAGAATGGTATGAATTTAGTATTACTCTTGTCATaGAAAAGCTCTTTCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: CVCAQLTAAFFSENGMNLVLLLS*KSSFLR Trigger: TCTCAGGAAAGAGCTTTTCAATGACAAGAGTAATAC...TAAATTCATACCATTCTCTGAAAAGAAGGCTGCAGTCAGCTGAGCACAGACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219574.2 |
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