Pregenerated sensors for VPS16 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027411Ensembl transcript IDs: ENSMUST00000028900.11, ENSMUST00000128994.8
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATGTCATGCTCTTCAGTGTAGGGCTTCCCGGGTACCGTGGTGCTTaGATATTATGCCATCTCCCACCACACCTTCCTCCAGGCTGTGAG | + |
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Preference number: 1 (lower is better) Translates to: HVMLFSVGLPGYRGA*ILCHLPPHLPPGCE Trigger: CTCACAGCCTGGAGGAAGGTGTGGTGGGAGATGGCATAATATTCAAGCACCACGGTACCCGGGAAGCCCTACACTGAAGAGCATGACATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| 3UTR CCA 90 bp | CCATTCATTCATTCATACACCCATCTATTCAGTATGTTTTGTATATaGGTAAAGATCAGAGGAGAAGGGTTTAAACTCAAGTTGCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: PFIHSYTHLFSMFCI*VKIRGEGFKLKLPG Trigger: GCCAGGCAACTTGAGTTTAAACCCTTCTCCTCTGATCTTTACCCATATACAAAACATACTGAATAGATGGGTGTATGAATGAATGAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| 3UTR-3UTR TCA 90 bp | AGAGGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTTAGCGGGTACCGTGGTGCTTaGATATTATGCCATCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: RGEGFKLKLPGLVAKAFSGYRGA*ILCHLP Trigger: TGGGAGATGGCATAATATTCAAGCACCACGGTACCC...GCTAAAGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| 3UTR-3UTR GCA 90 bp | GACTACGTGAATAAACAGATCTCTTATAACTTCCTATTCCCAACCTCAATACAAGTAGCTAGACAGTTTTaGCTCAAAGCCTGCTTTTCT | + |
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Preference number: 2 (lower is better) Translates to: DYVNKQISYNFLFPTSIQVARQF*LKACFS Trigger: AGAAAAGCAGGCTTTGAGGCAAAACTGTCTAGCTAC...TTGTATTGAGGTTGGGAATAGGAAGTTATAAGAGATCTGTTTATTCACGTAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| 3UTR TCA 72 bp | CTCTTCAGTGTAGGGCTTCCCGGGTACCGTGGTGCTTaGATATTATGCCATCTCCCACCACACCTTCCTCCA | + |
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Preference number: 3 (lower is better) Translates to: LFSVGLPGYRGA*ILCHLPPHLPP Trigger: TGGAGGAAGGTGTGGTGGGAGATGGCATAATATTCAAGCACCACGGTACCCGGGAAGCCCTACACTGAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| 3UTR GCA 72 bp | CATGCTCTTCAGTGTAGGGCTTCCCGGGTACCGTGGTaGTTGAATATTATGCCATCTCCCACCACACCTTCC | + |
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Preference number: 3 (lower is better) Translates to: HALQCRASRVPW*LNIMPSPTTPS Trigger: GGAAGGTGTGGTGGGAGATGGCATAATATTCAAGCACCACGGTACCCGGGAAGCCCTACACTGAAGAGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| 3UTR CCA 72 bp | GAGGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTaGCAAAAGCCTTTAGCTACTGAGCCACCTGGCCAG | + |
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Preference number: 3 (lower is better) Translates to: EEKGLNSSCLAW*QKPLATEPPGQ Trigger: CTGGCCAGGTGGCTCAGTAGCTAAAGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| 3UTR GCA 72 bp | ACCTGGCCAGCCCAAATCCTTCTTTTGATACGTATTTaGTGTTATAGATTCAGAACTGTTGTGAGGGATGGG | + |
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Preference number: 3 (lower is better) Translates to: TWPAQILLLIRI*CYRFRTVVRDG Trigger: CCCATCCCTCACAACAGTTCTGAATCTATAACAGCAAATACGTATCAAAAGAAGGATTTGGGCTGGCCAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| 3UTR-3UTR CAA 90 bp | TTCAGTATGTTTTGTATATGGGTAAAGATCAGAGGAGAAGGGTTTAAACTCAAGCGGGTACCGTGGTGCTaGAATATTATGCCATCTCCC | + |
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Preference number: 3 (lower is better) Translates to: FSMFCIWVKIRGEGFKLKRVPWC*NIMPSP Trigger: GGGAGATGGCATAATATTCAAGCACCACGGTACCCG...CTTGAGTTTAAACCCTTCTCCTCTGATCTTTACCCATATACAAAACATACTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| 3UTR TCA 72 bp | GAGACAGCTTCTGAGAGAATTACTATGGTGACTACGTaGATAAACAGATCTCTTATAACTTCCTATTCCCAA | + |
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Preference number: 3 (lower is better) Translates to: ETASERITMVTT*INRSLITSYSQ Trigger: TTGGGAATAGGAAGTTATAAGAGATCTGTTTATTCACGTAGTCACCATAGTAATTCTCTCAGAAGCTGTCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR TCA 90 bp | AGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCATGTCATGCTCTTCAGTCAGCTCCTCCTCAGCTaGCCAGCCGAGGGCCACCAC | + |
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Preference number: 4 (lower is better) Translates to: SAQCGPCKLMGRHVMLFSQLLLS*PAEGHH Trigger: GTGGTGGCCCTCGGCTGGTCAGCTGAGGAGGAGCTG...ACTGAAGAGCATGACATGCCTGCCCATGAGCTTACAAGGACCACACTGTGCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR GCA 90 bp | TTCCCGGGTACCGTGGTGCTTGAATATTATGCCATCTCCCACCACACCTTCCTCACGTGCCAGCTGCTCTaGCCGCTTGTTGTGGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: FPGTVVLEYYAISHHTFLTCQLL*PLVVAS Trigger: GGAGGCCACAACAAGCGGGCAGAGCAGCTGGCACGT...GAGGAAGGTGTGGTGGGAGATGGCATAATATTCAAGCACCACGGTACCCGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR TCA 90 bp | TCCCGGGTACCGTGGTGCTTGAATATTATGCCATCTCCCACCACACCTTCCTCCGGGCTAGGATCCTGCTaGCACCCTGGACTTCAGGAA | + |
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Preference number: 4 (lower is better) Translates to: SRVPWCLNIMPSPTTPSSGLGSC*HPGLQE Trigger: TTCCTGAAGTCCAGGGTGTCAGCAGGATCCTAGCCC...GGAGGAAGGTGTGGTGGGAGATGGCATAATATTCAAGCACCACGGTACCCGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR GCA 90 bp | TCCCGGGTACCGTGGTGCTTGAATATTATGCCATCTCCCACCACACCTTCCTCCTGCCGTCTGCAGAGCTaGCACTCGCCCTTCAATACG | + |
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Preference number: 4 (lower is better) Translates to: SRVPWCLNIMPSPTTPSSCRLQS*HSPFNT Trigger: CGTATTGAAGGGCGAGTGGCAGCTCTGCAGACGGCA...GGAGGAAGGTGTGGTGGGAGATGGCATAATATTCAAGCACCACGGTACCCGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CCA 90 bp | TCCCGGGTACCGTGGTGCTTGAATATTATGCCATCTCCCACCACACCTTCCTCCCAGACCTGGCACCTCTaGCATCCGACGGAGTTTGAG | + |
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Preference number: 4 (lower is better) Translates to: SRVPWCLNIMPSPTTPSSQTWHL*HPTEFE Trigger: CTCAAACTCCGTCGGATGCCAGAGGTGCCAGGTCTG...GGAGGAAGGTGTGGTGGGAGATGGCATAATATTCAAGCACCACGGTACCCGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR TCA 90 bp | TCCCGGGTACCGTGGTGCTTGAATATTATGCCATCTCCCACCACACCTTCCTCCCAGTGTGGTCCAACATaGGGGTGCACTTTGCAGACC | + |
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Preference number: 4 (lower is better) Translates to: SRVPWCLNIMPSPTTPSSQCGPT*GCTLQT Trigger: GGTCTGCAAAGTGCACCCTCATGTTGGACCACACTG...GGAGGAAGGTGTGGTGGGAGATGGCATAATATTCAAGCACCACGGTACCCGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| 3UTR CAA 72 bp | GCTCTTCAGTGTAGGGCTTCCCGGGTACCGTGGTGCTaGAATATTATGCCATCTCCCACCACACCTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: ALQCRASRVPWC*NIMPSPTTPSS Trigger: GGAGGAAGGTGTGGTGGGAGATGGCATAATATTCAAGCACCACGGTACCCGGGAAGCCCTACACTGAAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR TCA 90 bp | AGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCATGTCATGCTCTTCAGTCGGCATAGCTGGCTCTaGTGTGGAAGCTGCCCAACT | + |
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Preference number: 4 (lower is better) Translates to: SAQCGPCKLMGRHVMLFSRHSWL*CGSCPT Trigger: AGTTGGGCAGCTTCCACATCAGAGCCAGCTATGCCG...ACTGAAGAGCATGACATGCCTGCCCATGAGCTTACAAGGACCACACTGTGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR GCA 90 bp | AGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCATGTCATGCTCTTCAGTCATGAGGGTGCACTTTaGAGACCTGGCACCTCTGGC | + |
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Preference number: 4 (lower is better) Translates to: SAQCGPCKLMGRHVMLFSHEGAL*RPGTSG Trigger: GCCAGAGGTGCCAGGTCTGCAAAGTGCACCCTCATG...ACTGAAGAGCATGACATGCCTGCCCATGAGCTTACAAGGACCACACTGTGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR GCA 90 bp | GAAGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCATGTCATGCTCTTCACAACAGCCCTTTCCTTaGTCCGAGGACGGCTACACC | + |
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Preference number: 4 (lower is better) Translates to: EVHSVVLVSSWAGMSCSSQQPFP*SEDGYT Trigger: GGTGTAGCCGTCCTCGGAGCAAGGAAAGGGCTGTTG...TGAAGAGCATGACATGCCTGCCCATGAGCTTACAAGGACCACACTGTGCACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR GCA 90 bp | AGAGGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTTAGCGCATCAGCTGCCGTCTaGAGAGCTGCCACTCGCCCT | + |
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Preference number: 4 (lower is better) Translates to: RGEGFKLKLPGLVAKAFSASAAV*RAATRP Trigger: AGGGCGAGTGGCAGCTCTGCAGACGGCAGCTGATGC...GCTAAAGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR GCA 90 bp | AGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCATGTCATGCTCTTCAGTGTAGAAGGCATCAGCTaGCGTCTGCAGAGCTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: SAQCGPCKLMGRHVMLFSVEGIS*RLQSCH Trigger: GTGGCAGCTCTGCAGACGGCAGCTGATGCCTTCTAC...ACTGAAGAGCATGACATGCCTGCCCATGAGCTTACAAGGACCACACTGTGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR GCA 90 bp | AGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCATGTCATGCTCTTCAGTAAGTCACGTGCCAGCTaGTCTGCCCGCTTGTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SAQCGPCKLMGRHVMLFSKSRAS*SARLLW Trigger: CCACAACAAGCGGGCAGAGCAGCTGGCACGTGACTT...ACTGAAGAGCATGACATGCCTGCCCATGAGCTTACAAGGACCACACTGTGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CCA 90 bp | GAAGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCATGTCATGCTCTTCAAGCTGGCCCAGTTCCTaGATCTCCCGCAGGTACTCA | + |
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Preference number: 4 (lower is better) Translates to: EVHSVVLVSSWAGMSCSSSWPSS*ISRRYS Trigger: TGAGTACCTGCGGGAGATCCAGGAACTGGGCCAGCT...TGAAGAGCATGACATGCCTGCCCATGAGCTTACAAGGACCACACTGTGCACTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CCA 90 bp | TGGGTGAATAATAGCGAAGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCCTATGGCCCCATCTGTaGCTCCAGTGCAGTGGGACA | + |
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Preference number: 4 (lower is better) Translates to: WVNNSEVHSVVLVSSWAGLWPHL*LQCSGT Trigger: TGTCCCACTGCACTGGAGCCACAGATGGGGCCATAG...GCCTGCCCATGAGCTTACAAGGACCACACTGTGCACTTCGCTATTATTCACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR TCA 90 bp | TGGGTGAATAATAGCGAAGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCCACACAGCTTCTCCTTaGGTGATGCTGTCCCCATCC | + |
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Preference number: 4 (lower is better) Translates to: WVNNSEVHSVVLVSSWAGHTASP*VMLSPS Trigger: GGATGGGGACAGCATCACTCAAGGAGAAGCTGTGTG...GCCTGCCCATGAGCTTACAAGGACCACACTGTGCACTTCGCTATTATTCACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR TCA 90 bp | AGATCAGAGGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTGTGCCCTGGCCCGCTaGATCTTGTCAGCTATGGCC | + |
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Preference number: 4 (lower is better) Translates to: RSEEKGLNSSCLAWWQKPCALAR*ILSAMA Trigger: GGCCATAGCTGACAAGATTCAGCGGGCCAGGGCACA...AGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCCTCTGATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR GCA 90 bp | TGGGTGAATAATAGCGAAGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCTGCTTCGGGAGAAGATaGGGACCCCATCAAGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: WVNNSEVHSVVLVSSWAGCFGRR*GPHQAQ Trigger: CTGAGCTTGATGGGGTCCGCATCTTCTCCCGAAGCA...GCCTGCCCATGAGCTTACAAGGACCACACTGTGCACTTCGCTATTATTCACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR GCA 90 bp | AGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCATGTCATGCTCTTCAGTTGCATGTCTGGCTGGTaGTCATGTCCTGCAGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: SAQCGPCKLMGRHVMLFSCMSGW*SCPAAS Trigger: TGAGGCTGCAGGACATGAGCACCAGCCAGACATGCA...ACTGAAGAGCATGACATGCCTGCCCATGAGCTTACAAGGACCACACTGTGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR GCA 90 bp | GAAGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCATGTCATGCTCTTCACTTCTTCTGGGCTTGTaGCCTGGCCCGCTGAATCTT | + |
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Preference number: 4 (lower is better) Translates to: EVHSVVLVSSWAGMSCSSLLLGL*PGPLNL Trigger: AAGATTCAGCGGGCCAGGGCACAAGCCCAGAAGAAG...TGAAGAGCATGACATGCCTGCCCATGAGCTTACAAGGACCACACTGTGCACTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CCA 90 bp | TGGGTGAATAATAGCGAAGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCGGCAGAGTCCCCGAGTaGATTCCAGTTCGCAGTGTA | + |
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Preference number: 4 (lower is better) Translates to: WVNNSEVHSVVLVSSWAGGRVPE*IPVRSV Trigger: TACACTGCGAACTGGAATCCACTCGGGGACTCTGCC...GCCTGCCCATGAGCTTACAAGGACCACACTGTGCACTTCGCTATTATTCACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CCA 90 bp | GAAGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCATGTCATGCTCTTCATCCTCAGTAGAGCAATaGGACCCCCATAGGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: EVHSVVLVSSWAGMSCSSSSVEQ*DPHRVQ Trigger: CTGCACCCTATGGGGGTCCCATTGCTCTACTGAGGA...TGAAGAGCATGACATGCCTGCCCATGAGCTTACAAGGACCACACTGTGCACTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CCA 90 bp | TCCCGGGTACCGTGGTGCTTGAATATTATGCCATCTCCCACCACACCTTCCTCCACTCTTTTGCATGTCTaGCTGGTGCTCATGTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SRVPWCLNIMPSPTTPSSTLLHV*LVLMSC Trigger: GCAGGACATGAGCACCAGCCAGACATGCAAAAGAGT...GGAGGAAGGTGTGGTGGGAGATGGCATAATATTCAAGCACCACGGTACCCGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR TCA 90 bp | TTCCCGGGTACCGTGGTGCTTGAATATTATGCCATCTCCCACCACACCTTCCTCGAAACACTTTCCAAATaGAGCCGCCCTGAGCAGACT | + |
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Preference number: 4 (lower is better) Translates to: FPGTVVLEYYAISHHTFLETLSK*SRPEQT Trigger: AGTCTGCTCAGGGCGGCTTCATTTGGAAAGTGTTTC...GAGGAAGGTGTGGTGGGAGATGGCATAATATTCAAGCACCACGGTACCCGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR GCA 90 bp | ATATGGGTAAAGATCAGAGGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGGGACCCCCATAGGGTaGAGCAGCCACCAGGCAATC | + |
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Preference number: 4 (lower is better) Translates to: IWVKIRGEGFKLKLPGLVGTPIG*SSHQAI Trigger: GATTGCCTGGTGGCTGCTGCACCCTATGGGGGTCCC...CACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCCTCTGATCTTTACCCATAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR GCA 90 bp | GGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTTAGCTACGTCCTGCAGCCTCAATaGACTGCTGCACAGCCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GEGFKLKLPGLVAKAFSYVLQPQ*TAAQPG Trigger: TCCAGGCTGTGCAGCAGTGCATTGAGGCTGCAGGAC...GTAGCTAAAGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR GCA 90 bp | AGAGGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTTAGCAGGAGAAGAGGTACCTaGTCCCCTGAGCGTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RGEGFKLKLPGLVAKAFSRRRGT*SPERGS Trigger: TGAGCCACGCTCAGGGGAGCAGGTACCTCTTCTCCT...GCTAAAGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CCA 90 bp | TGGTGGCAAAAGCCTTTAGCTACTGAGCCACCTGGCCAGCCCAAATCCTTCTTTAGCCAGAAGAATGTGTaGTACTCGGTCGTGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: WWQKPLATEPPGQPKSFFSQKNV*YSVVAQ Trigger: CTGTGCCACGACCGAGTACCACACATTCTTCTGGCT...AAAGAAGGATTTGGGCTGGCCAGGTGGCTCAGTAGCTAAAGGCTTTTGCCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CCA 90 bp | TGGTGGCAAAAGCCTTTAGCTACTGAGCCACCTGGCCAGCCCAAATCCTTCTTTCTCTTCACTGGCCACTaGGACTTCATGCAGGAACTC | + |
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Preference number: 4 (lower is better) Translates to: WWQKPLATEPPGQPKSFFLFTGH*DFMQEL Trigger: GAGTTCCTGCATGAAGTCCCAGTGGCCAGTGAAGAG...AAAGAAGGATTTGGGCTGGCCAGGTGGCTCAGTAGCTAAAGGCTTTTGCCACCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR TCA 90 bp | GCCACCTGGCCAGCCCAAATCCTTCTTTTGATACGTATTTGCTGTTATAGATTCCCACCAGGCAATCCTTaGGCTCCTCCTTCAGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: ATWPAQILLLIRICCYRFPPGNP*APPSGP Trigger: GGGACCTGAAGGAGGAGCTCAAGGATTGCCTGGTGG...GAATCTATAACAGCAAATACGTATCAAAAGAAGGATTTGGGCTGGCCAGGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR TCA 90 bp | TGGGTGAATAATAGCGAAGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCGAACCAAACTCAGTGTaGAAAATCCGGGCATCCAGG | + |
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Preference number: 4 (lower is better) Translates to: WVNNSEVHSVVLVSSWAGEPNSV*KIRASR Trigger: CCTGGATGCCCGGATTTTTCACACTGAGTTTGGTTC...GCCTGCCCATGAGCTTACAAGGACCACACTGTGCACTTCGCTATTATTCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR TCA 90 bp | TGGGTGAATAATAGCGAAGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCAAGGATGGCCACCCCTaGACCAAACTCAGTGTGAAA | + |
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Preference number: 4 (lower is better) Translates to: WVNNSEVHSVVLVSSWAGKDGHP*TKLSVK Trigger: TTTCACACTGAGTTTGGTTCAGGGGTGGCCATCCTT...GCCTGCCCATGAGCTTACAAGGACCACACTGTGCACTTCGCTATTATTCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR TCA 90 bp | TGGTGGCAAAAGCCTTTAGCTACTGAGCCACCTGGCCAGCCCAAATCCTTCTTTCAAGAAGCAAAGCCTTaGCCTTTTGTTCAGGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: WWQKPLATEPPGQPKSFFQEAKP*PFVQGP Trigger: TGGGCCCTGAACAAAAGGTCAAGGCTTTGCTTCTTG...AAAGAAGGATTTGGGCTGGCCAGGTGGCTCAGTAGCTAAAGGCTTTTGCCACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR GCA 90 bp | AGAGGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTTAGCCCATCTGTAGGAAGCTaGTCACTCCTGGGGCTAAGC | + |
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Preference number: 4 (lower is better) Translates to: RGEGFKLKLPGLVAKAFSPSVGS*SLLGLS Trigger: GCTTAGCCCCAGGAGTGAGCAGCTTCCTACAGATGG...GCTAAAGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR GCA 90 bp | GGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTTAGCTACCTGGTGCTCATGTCCTaGAGCCTCAATGCACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: GEGFKLKLPGLVAKAFSYLVLMS*SLNALL Trigger: CAGCAGTGCATTGAGGCTGCAGGACATGAGCACCAG...GTAGCTAAAGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CCA 90 bp | AGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCATGTCATGCTCTTCAGTCTGTCTAGCAGCACCTaGATGGTGAGCTGCTTGTAT | + |
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Preference number: 4 (lower is better) Translates to: SAQCGPCKLMGRHVMLFSLSSST*MVSCLY Trigger: ATACAAGCAGCTCACCATCCAGGTGCTGCTAGACAG...ACTGAAGAGCATGACATGCCTGCCCATGAGCTTACAAGGACCACACTGTGCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR TCA 90 bp | GAAGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCATGTCATGCTCTTCACCAGGTAACGATACGTaGAGGATACAGCCATCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: EVHSVVLVSSWAGMSCSSPGNDT*RIQPSV Trigger: TACAGATGGCTGTATCCTTCACGTATCGTTACCTGG...TGAAGAGCATGACATGCCTGCCCATGAGCTTACAAGGACCACACTGTGCACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR TCA 90 bp | GGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTTAGCTACCCCGGATGTTGCAGTTaGACTCACACAGCTTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GEGFKLKLPGLVAKAFSYPGCCS*THTASP Trigger: AGGAGAAGCTGTGTGAGTTCAACTGCAACATCCGGG...GTAGCTAAAGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR TCA 90 bp | TGGTGGCAAAAGCCTTTAGCTACTGAGCCACCTGGCCAGCCCAAATCCTTCTTTAGAGTGTCTAGCTCCTaGTGCTTACAGAACTGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WWQKPLATEPPGQPKSFFRVSSS*CLQNCR Trigger: TCGACAGTTCTGTAAGCATCAGGAGCTAGACACTCT...AAAGAAGGATTTGGGCTGGCCAGGTGGCTCAGTAGCTAAAGGCTTTTGCCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTTAGCACTGCACCATCTTCTTaGACACAGAGCAGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGEGFKLKLPGLVAKAFSTAPSS*TQSSSS Trigger: GGAGGAGCTGCTCTGTGTGCAAGAAGATGGTGCAGT...GCTAAAGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | ATATGGGTAAAGATCAGAGGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCCTCAATGCACTGCTaGACAGCCTGGATCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IWVKIRGEGFKLKLPGLVASMHC*TAWISW Trigger: CCAGCTGATCCAGGCTGTGCAGCAGTGCATTGAGGC...CACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCCTCTGATCTTTACCCATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR CCA 90 bp | ATATGGGTAAAGATCAGAGGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGTGCACTTTGCAGACCTaGCACCTCTGGCATCCGACG | + |
|
Preference number: 4 (lower is better) Translates to: IWVKIRGEGFKLKLPGLVCTLQT*HLWHPT Trigger: CGTCGGATGCCAGAGGTGCCAGGTCTGCAAAGTGCA...CACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCCTCTGATCTTTACCCATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR CCA 90 bp | AGATCAGAGGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTCTCAGGGCCATGGGTTaGTTCCGGAGAGTCATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSEEKGLNSSCLAWWQKPLRAMG*FRRVMK Trigger: TTTCATGACTCTCCGGAACCAACCCATGGCCCTGAG...AGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCCTCTGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR TCA 90 bp | GCCACCTGGCCAGCCCAAATCCTTCTTTTGATACGTATTTGCTGTTATAGATTCAGCACTCGAAGGTCCTaGCACATGTGCACGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ATWPAQILLLIRICCYRFSTRRS*HMCTKL Trigger: CAGCTTCGTGCACATGTGTCAGGACCTTCGAGTGCT...GAATCTATAACAGCAAATACGTATCAAAAGAAGGATTTGGGCTGGCCAGGTGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | GGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTTAGCTACTCAGGTCCCAGTCCATaGTGTACAGCTCATACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GEGFKLKLPGLVAKAFSYSGPSP*CTAHTS Trigger: GGAAGTATGAGCTGTACAGCATGGACTGGGACCTGA...GTAGCTAAAGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | TGGTGGCAAAAGCCTTTAGCTACTGAGCCACCTGGCCAGCCCAAATCCTTCTTTTGTGTCTGTGAAGAGTaGCAGGTAACGATACGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WWQKPLATEPPGQPKSFFCVCEE*QVTIRE Trigger: TTCACGTATCGTTACCTGGCACTCTTCACAGACACA...AAAGAAGGATTTGGGCTGGCCAGGTGGCTCAGTAGCTAAAGGCTTTTGCCACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | CTATTCCCAACCTCAATACAATCAAATATGCAGAGTTCTGCTGCAGTAGCTAGATGCTTTCAGGCGCATTaGCCACCACCATCAGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFPTSIQSNMQSSAAVARCFQAH*PPPSAA Trigger: GGCGGCTGATGGTGGTGGGCAATGCGCCTGAAAGCA...TCTAGCTACTGCAGCAGAACTCTGCATATTTGATTGTATTGAGGTTGGGAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | AGAGGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTTAGCCTGAGCAGACTCTTTTaGATGTCTGGCTGGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGEGFKLKLPGLVAKAFSLSRLF*MSGWCS Trigger: TGAGCACCAGCCAGACATGCAAAAGAGTCTGCTCAG...GCTAAAGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR CCA 90 bp | AGATCAGAGGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTCATGCAGGAACTCATaGGTGCTTCGGGAGAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: RSEEKGLNSSCLAWWQKPSCRNS*VLREKM Trigger: CATCTTCTCCCGAAGCACCCATGAGTTCCTGCATGA...AGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCCTCTGATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR CCA 90 bp | TGGGTGAATAATAGCGAAGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCTTCTCATATTCCTTCTaGGCCTCTAACAGCAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WVNNSEVHSVVLVSSWAGFSYSF*ASNSSA Trigger: AGCACTGCTGTTAGAGGCCCAGAAGGAATATGAGAA...GCCTGCCCATGAGCTTACAAGGACCACACTGTGCACTTCGCTATTATTCACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR TCA 90 bp | ATATGGGTAAAGATCAGAGGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGCAGCTTCTCCTTGAGTaGTGCTGTCCCCATCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: IWVKIRGEGFKLKLPGLVQLLLE*CCPHPD Trigger: ATCTGGATGGGGACAGCATCACTCAAGGAGAAGCTG...CACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCCTCTGATCTTTACCCATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | CTATTCCCAACCTCAATACAATCAAATATGCAGAGTTCTGCTGCAGTAGCTAGAGCAGCCTCAATGCACTaGTGCACAGCCTGGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFPTSIQSNMQSSAAVARAASMH*CTAWIS Trigger: GCTGATCCAGGCTGTGCAGCAGTGCATTGAGGCTGC...TCTAGCTACTGCAGCAGAACTCTGCATATTTGATTGTATTGAGGTTGGGAATAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | CTATTCCCAACCTCAATACAATCAAATATGCAGAGTTCTGCTGCAGTAGCTAGACTCAATAGCCACCTCTaGAGCCTGAGCCACATCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LFPTSIQSNMQSSAAVARLNSHL*SLSHIP Trigger: GGGGATGTGGCTCAGGCTGCAGAGGTGGCTATTGAG...TCTAGCTACTGCAGCAGAACTCTGCATATTTGATTGTATTGAGGTTGGGAATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR CCA 90 bp | GGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTTAGCTACGATCCTCTGTGGCCTTaGCTGCAAATTCATTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GEGFKLKLPGLVAKAFSYDPLWP*LQIHSW Trigger: CCAAGAATGAATTTGCAGCCAAGGCCACAGAGGATC...GTAGCTAAAGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR TCA 90 bp | AGATCAGAGGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTGCTACATCTTCATCTaGGACATCTTTCTGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RSEEKGLNSSCLAWWQKPCYIFI*DIFLLH Trigger: GTGCAGCAGAAAGATGTCTCAGATGAAGATGTAGCA...AGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCCTCTGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR TCA 90 bp | GCCCAAATCCTTCTTTTGATACGTATTTGCTGTTATAGATTCAGAACTGTTGTGAGGTACCTGCTCCCCTaGGCGTGGCTCATACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQILLLIRICCYRFRTVVRYLLP*AWLILQ Trigger: CTGGAGTATGAGCCACGCTCAGGGGAGCAGGTACCT...CACAACAGTTCTGAATCTATAACAGCAAATACGTATCAAAAGAAGGATTTGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR TCA 90 bp | AGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCATGTCATGCTCTTCAGTCAGGTAACCAATCGGTaGTTTCTTGCTTTTGGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAQCGPCKLMGRHVMLFSQVTNR*FLAFGK Trigger: TTTTCCAAAAGCAAGAAATCACCGATTGGTTACCTG...ACTGAAGAGCATGACATGCCTGCCCATGAGCTTACAAGGACCACACTGTGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR TCA 90 bp | ATACACCCATCTATTCAGTATGTTTTGTATATGGGTAAAGATCAGAGGAGAAGGGCCACCTCTGCAGCCTaGGCCACATCCCCAACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: IHPSIQYVLYMGKDQRRRATSAA*ATSPTR Trigger: TCTTGTTGGGGATGTGGCTCAGGCTGCAGAGGTGGC...CCTTCTCCTCTGATCTTTACCCATATACAAAACATACTGAATAGATGGGTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | ATACACCCATCTATTCAGTATGTTTTGTATATGGGTAAAGATCAGAGGAGAAGGCTACACCAGACCATCTaGTTCGGGGGAGCCCGGATG | + |
|
Preference number: 4 (lower is better) Translates to: IHPSIQYVLYMGKDQRRRLHQTI*FGGARM Trigger: CATCCGGGCTCCCCCGAAGCAGATGGTCTGGTGTAG...CCTTCTCCTCTGATCTTTACCCATATACAAAACATACTGAATAGATGGGTGTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | GAAGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCATGTCATGCTCTTCATGTTATGCTGTTTCATaGAGATCTCTACAAAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EVHSVVLVSSWAGMSCSSCYAVS*RSLQRA Trigger: TGCCCTTTGTAGAGATCTGCATGAAACAGCATAACA...TGAAGAGCATGACATGCCTGCCCATGAGCTTACAAGGACCACACTGTGCACTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | AGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCATGTCATGCTCTTCAGTGCCTCATGTTTGTTATaGTGTTTCATGCAGATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAQCGPCKLMGRHVMLFSASCLL*CFMQIS Trigger: AGAGATCTGCATGAAACAGCATAACAAACATGAGGC...ACTGAAGAGCATGACATGCCTGCCCATGAGCTTACAAGGACCACACTGTGCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR CCA 90 bp | AGATCAGAGGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTCACGAAGCTGTCAGGTaGAAATCTGTCAAGGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RSEEKGLNSSCLAWWQKPHEAVR*KSVKET Trigger: TGTTTCCTTGACAGATTTCCACCTGACAGCTTCGTG...AGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCCTCTGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR CCA 90 bp | TGGTGGCAAAAGCCTTTAGCTACTGAGCCACCTGGCCAGCCCAAATCCTTCTTTCTGCAAATTCATTCTTaGCTTTGTAGAAGGCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: WWQKPLATEPPGQPKSFFLQIHS*LCRRHQ Trigger: CTGATGCCTTCTACAAAGCCAAGAATGAATTTGCAG...AAAGAAGGATTTGGGCTGGCCAGGTGGCTCAGTAGCTAAAGGCTTTTGCCACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR TCA 90 bp | GGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTTAGCTACAAAAGTCTCCTCGGTTaGGTTCATTCTTTAGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GEGFKLKLPGLVAKAFSYKSLLG*VHSLGA Trigger: TGCACCTAAAGAATGAACTCAACCGAGGAGACTTTT...GTAGCTAAAGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR CCA 90 bp | GACTACGTGAATAAACAGATCTCTTATAACTTCCTATTCCCAACCTCAATACAACACTGCTGCACAGCCTaGATCAGCTGGCCCAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DYVNKQISYNFLFPTSIQHCCTA*ISWPSS Trigger: GGAACTGGGCCAGCTGATCCAGGCTGTGCAGCAGTG...TTGTATTGAGGTTGGGAATAGGAAGTTATAAGAGATCTGTTTATTCACGTAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR CCA 90 bp | CTATTCCCAACCTCAATACAATCAAATATGCAGAGTTCTGCTGCAGTAGCTAGATTTTGCATGTCTGGCTaGTGCTCATGTCCTGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LFPTSIQSNMQSSAAVARFCMSG*CSCPAA Trigger: GGCTGCAGGACATGAGCACCAGCCAGACATGCAAAA...TCTAGCTACTGCAGCAGAACTCTGCATATTTGATTGTATTGAGGTTGGGAATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | GCCACCTGGCCAGCCCAAATCCTTCTTTTGATACGTATTTGCTGTTATAGATTCCTCTGTGGCCTTGGCTaGAAATTCATTCTTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ATWPAQILLLIRICCYRFLCGLG*KFILGF Trigger: AAAGCCAAGAATGAATTTGCAGCCAAGGCCACAGAG...GAATCTATAACAGCAAATACGTATCAAAAGAAGGATTTGGGCTGGCCAGGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | TTCAGTATGTTTTGTATATGGGTAAAGATCAGAGGAGAAGGGTTTAAACTCAAGGATGCGAAAGTCACGTaGCAGCTGCTCTGCCCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSMFCIWVKIRGEGFKLKDAKVT*QLLCPL Trigger: AAGCGGGCAGAGCAGCTGGCACGTGACTTTCGCATC...CTTGAGTTTAAACCCTTCTCCTCTGATCTTTACCCATATACAAAACATACTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR CCA 90 bp | TTCAGTATGTTTTGTATATGGGTAAAGATCAGAGGAGAAGGGTTTAAACTCAAGTCTGGGCTTGTGCCCTaGCCCGCTGAATCTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FSMFCIWVKIRGEGFKLKSGLVP*PAESCQ Trigger: CTGACAAGATTCAGCGGGCCAGGGCACAAGCCCAGA...CTTGAGTTTAAACCCTTCTCCTCTGATCTTTACCCATATACAAAACATACTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR TCA 90 bp | TTCAGTATGTTTTGTATATGGGTAAAGATCAGAGGAGAAGGGTTTAAACTCAAGCTTCATTGCCCATGCTaGAGTGCCTCCGGAAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FSMFCIWVKIRGEGFKLKLHCPC*SASGSL Trigger: GAGACTTCCGGAGGCACTTCAGCATGGGCAATGAAG...CTTGAGTTTAAACCCTTCTCCTCTGATCTTTACCCATATACAAAACATACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | GCCCAAATCCTTCTTTTGATACGTATTTGCTGTTATAGATTCAGAACTGTTGTGCGAGCACAAACTGGATaGTTTCAGGCGCATTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AQILLLIRICCYRFRTVVRAQTG*FQAHCP Trigger: TGGGCAATGCGCCTGAAAGCATCCAGTTTGTGCTCG...CACAACAGTTCTGAATCTATAACAGCAAATACGTATCAAAAGAAGGATTTGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | TTCAGTATGTTTTGTATATGGGTAAAGATCAGAGGAGAAGGGTTTAAACTCAAGGCAGGAACTCATGGGTaGTTCGGGAGAAGATGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSMFCIWVKIRGEGFKLKAGTHG*FGRRCG Trigger: TCCGCATCTTCTCCCGAAGCACCCATGAGTTCCTGC...CTTGAGTTTAAACCCTTCTCCTCTGATCTTTACCCATATACAAAACATACTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR CCA 90 bp | ATATGGGTAAAGATCAGAGGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGGGAAGCATACTTCTTaGCCTCATGTTTGTTATGCT | + |
|
Preference number: 4 (lower is better) Translates to: IWVKIRGEGFKLKLPGLVGKHTS*PHVCYA Trigger: AGCATAACAAACATGAGGCCAAGAAGTATGCTTCCC...CACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCCTCTGATCTTTACCCATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR TCA 90 bp | ATACACCCATCTATTCAGTATGTTTTGTATATGGGTAAAGATCAGAGGAGAAGGTGCTCCAGGGGCCATTaGGGCAATTTTGAAGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: IHPSIQYVLYMGKDQRRRCSRGH*GNFEDL Trigger: GAGATCTTCAAAATTGCCTCAATGGCCCCTGGAGCA...CCTTCTCCTCTGATCTTTACCCATATACAAAACATACTGAATAGATGGGTGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR TCA 90 bp | GCCCAAATCCTTCTTTTGATACGTATTTGCTGTTATAGATTCAGAACTGTTGTGAGCAATGTCAGAGTATaGAACACCAGGCGTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: AQILLLIRICCYRFRTVVSNVRV*NTRRVT Trigger: GGTGACACGCCTGGTGTTTCATACTCTGACATTGCT...CACAACAGTTCTGAATCTATAACAGCAAATACGTATCAAAAGAAGGATTTGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | TTCAGTATGTTTTGTATATGGGTAAAGATCAGAGGAGAAGGGTTTAAACTCAAGGTCTCTTATCAGGGATaGGAAAGTCACGTGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSMFCIWVKIRGEGFKLKVSYQG*ESHVPA Trigger: AGCTGGCACGTGACTTTCGCATCCCTGATAAGAGAC...CTTGAGTTTAAACCCTTCTCCTCTGATCTTTACCCATATACAAAACATACTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | GCCCAAATCCTTCTTTTGATACGTATTTGCTGTTATAGATTCAGAACTGTTGTGTGCTCAGTGCCAGTTTaGTCCTCTTCATCTTTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AQILLLIRICCYRFRTVVCSVPV*SSSSLG Trigger: TCCTAAAGATGAAGAGGAGCAAACTGGCACTGAGCA...CACAACAGTTCTGAATCTATAACAGCAAATACGTATCAAAAGAAGGATTTGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR GCA 90 bp | ATACACCCATCTATTCAGTATGTTTTGTATATGGGTAAAGATCAGAGGAGAAGGAATAGCCTTGCTCAGTaGCAGTTTGCTCCTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IHPSIQYVLYMGKDQRRRNSLAQ*QFAPLH Trigger: ATGAAGAGGAGCAAACTGGCACTGAGCAAGGCTATT...CCTTCTCCTCTGATCTTTACCCATATACAAAACATACTGAATAGATGGGTGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR CCA 90 bp | GCCCAAATCCTTCTTTTGATACGTATTTGCTGTTATAGATTCAGAACTGTTGTGTCATTTGATCCTCTGTaGCCTTGGCTGCAAATTCAT | + |
|
Preference number: 4 (lower is better) Translates to: AQILLLIRICCYRFRTVVSFDPL*PWLQIH Trigger: ATGAATTTGCAGCCAAGGCCACAGAGGATCAAATGA...CACAACAGTTCTGAATCTATAACAGCAAATACGTATCAAAAGAAGGATTTGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR CCA 90 bp | TTCAGTATGTTTTGTATATGGGTAAAGATCAGAGGAGAAGGGTTTAAACTCAAGTACTCATCTGCTTTCTaGCTCTCTTTCTCATATTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSMFCIWVKIRGEGFKLKYSSAF*LSFSYS Trigger: GGAATATGAGAAAGAGAGCCAGAAAGCAGATGAGTA...CTTGAGTTTAAACCCTTCTCCTCTGATCTTTACCCATATACAAAACATACTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS GCA 90 bp | CCACCATCAGCCGCCTCTCCCAGGCCACAACAACAGCCCTTTCCTTaGTCCGAGGACGGCTACACCAGACCATCTGCTTCGGGGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PPSAASPRPQQQPFP*SEDGYTRPSASGEP Trigger: GGGCTCCCCCGAAGCAGATGGTCTGGTGTAGCCGTCCTCGGAGCAAGGAAAGGGCTGTTGTTGTGGCCTGGGAGAGGCGGCTGATGGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
||
| CDS CCA 90 bp | GGCTGGTGCTCATGTCCTGCAGCCTCAATGCACTGCTGCACAGCCTaGATCAGCTGGCCCAGTTCCTGGATCTCCCGCAGGTACTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: GWCSCPAASMHCCTA*ISWPSSWISRRYSS Trigger: AGATGAGTACCTGCGGGAGATCCAGGAACTGGGCCAGCTGATCCAGGCTGTGCAGCAGTGCATTGAGGCTGCAGGACATGAGCACCAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS GCA 90 bp | AGTAGGAGTCCTCATCGAGCACAAACTGGATGCTTTCAGGCGCATTaGCCACCACCATCAGCCGCCTCTCCCAGGCCACAACAACAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SRSPHRAQTGCFQAH*PPPSAASPRPQQQP Trigger: GGGCTGTTGTTGTGGCCTGGGAGAGGCGGCTGATGGTGGTGGGCAATGCGCCTGAAAGCATCCAGTTTGTGCTCGATGAGGACTCCTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
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| CDS TCA 90 bp | GAGCAATGGGACCCCCATAGGGTGCAGCAGCCACCAGGCAATCCTTaGGCTCCTCCTTCAGGTCCCAGTCCATGCTGTACAGCTCATACT | + |
|
Preference number: 5 (lower is better) Translates to: EQWDPHRVQQPPGNP*APPSGPSPCCTAHT Trigger: AGTATGAGCTGTACAGCATGGACTGGGACCTGAAGGAGGAGCTCAAGGATTGCCTGGTGGCTGCTGCACCCTATGGGGGTCCCATTGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
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| CDS TCA 90 bp | CTTTCTGCTGCACCTTGTAGCAGGCCCAGTGGGCTAGGATCCTGCTaGCACCCTGGACTTCAGGAAGGCGCAGGTACTCGCATATCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: LSAAPCSRPSGLGSC*HPGLQEGAGTRISG Trigger: TCCAGATATGCGAGTACCTGCGCCTTCCTGAAGTCCAGGGTGTCAGCAGGATCCTAGCCCACTGGGCCTGCTACAAGGTGCAGCAGAAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS GCA 90 bp | CCAAATGAAGCCGCCCTGAGCAGACTCTTTTGCATGTCTGGCTGGTaGTCATGTCCTGCAGCCTCAATGCACTGCTGCACAGCCTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: PNEAALSRLFCMSGW*SCPAASMHCCTAWI Trigger: GATCCAGGCTGTGCAGCAGTGCATTGAGGCTGCAGGACATGAGCACCAGCCAGACATGCAAAAGAGTCTGCTCAGGGCGGCTTCATTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS GCA 90 bp | TGGCCCGCTGAATCTTGTCAGCTATGGCCCCATCTGTGGCTCCAGTaGAGTGGGACAAAACGAGGCTCAGCTCTGTTTCATTCCGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: WPAESCQLWPHLWLQ*SGTKRGSALFHSGA Trigger: AGCACCGGAATGAAACAGAGCTGAGCCTCGTTTTGTCCCACTGCACTGGAGCCACAGATGGGGCCATAGCTGACAAGATTCAGCGGGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CCA 90 bp | GTCCTACAGCCAGAAGAATGTGTGGTACTCGGTCGTGGCACAGTGTaGTCCAACATGAGGGTGCACTTTGCAGACCTGGCACCTCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VLQPEECVVLGRGTV*SNMRVHFADLAPLA Trigger: TGCCAGAGGTGCCAGGTCTGCAAAGTGCACCCTCATGTTGGACCACACTGTGCCACGACCGAGTACCACACATTCTTCTGGCTGTAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
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| CDS CCA 90 bp | CTTGTGCCCTGGCCCGCTGAATCTTGTCAGCTATGGCCCCATCTGTaGCTCCAGTGCAGTGGGACAAAACGAGGCTCAGCTCTGTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: LVPWPAESCQLWPHL*LQCSGTKRGSALFH Trigger: ATGAAACAGAGCTGAGCCTCGTTTTGTCCCACTGCACTGGAGCCACAGATGGGGCCATAGCTGACAAGATTCAGCGGGCCAGGGCACAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS TCA 90 bp | TTCAGTGCGGCCACAGCCATAGGCCCTCGCAGCAATGTCAGAGTATaGAACACCAGGCGTGTCACCCAGCTTCTGATTAATAGCCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSAATAIGPRSNVRV*NTRRVTQLLINSPC Trigger: GCACGGGCTATTAATCAGAAGCTGGGTGACACGCCTGGTGTTTCATACTCTGACATTGCTGCGAGGGCCTATGGCTGTGGCCGCACTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS GCA 90 bp | CCACTGGGACTTCATGCAGGAACTCATGGGTGCTTCGGGAGAAGATaGGGACCCCATCAAGCTCAGGCACTAAGTAGGAGTCCTCATCGA | + |
|
Preference number: 5 (lower is better) Translates to: PLGLHAGTHGCFGRR*GPHQAQALSRSPHR Trigger: TCGATGAGGACTCCTACTTAGTGCCTGAGCTTGATGGGGTCCGCATCTTCTCCCGAAGCACCCATGAGTTCCTGCATGAAGTCCCAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
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| CDS CCA 90 bp | TTTCCAAATGAAGCCGCCCTGAGCAGACTCTTTTGCATGTCTGGCTaGTGCTCATGTCCTGCAGCCTCAATGCACTGCTGCACAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FPNEAALSRLFCMSG*CSCPAASMHCCTAW Trigger: CCAGGCTGTGCAGCAGTGCATTGAGGCTGCAGGACATGAGCACCAGCCAGACATGCAAAAGAGTCTGCTCAGGGCGGCTTCATTTGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CCA 90 bp | TCAGGGATGCGAAAGTCACGTGCCAGCTGCTCTGCCCGCTTGTTGTaGCCTCCAAGGATAAGAGTGGTGACAGTGTCGTGTAGAGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: SGMRKSRASCSARLL*PPRIRVVTVSCRDR Trigger: CCTATCTCTACACGACACTGTCACCACTCTTATCCTTGGAGGCCACAACAAGCGGGCAGAGCAGCTGGCACGTGACTTTCGCATCCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS-3UTR CAA 90 bp | TCCCGGGTACCGTGGTGCTTGAATATTATGCCATCTCCCACCACACCTTCCTCCACTCAGGGCCATGGGTaGGTTCCGGAGAGTCATGAA | + |
|
Preference number: 5 (lower is better) Translates to: SRVPWCLNIMPSPTTPSSTQGHG*VPESHE Trigger: TTCATGACTCTCCGGAACCAACCCATGGCCCTGAGT...GGAGGAAGGTGTGGTGGGAGATGGCATAATATTCAAGCACCACGGTACCCGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS GCA 90 bp | TTCATTCTTGGCTTTGTAGAAGGCATCAGCTGCCGTCTGCAGAGCTaGCACTCGCCCTTCAATACGCTCTTCAGCGGCATAGCTGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FILGFVEGISCRLQS*HSPFNTLFSGIAGS Trigger: AGAGCCAGCTATGCCGCTGAAGAGCGTATTGAAGGGCGAGTGGCAGCTCTGCAGACGGCAGCTGATGCCTTCTACAAAGCCAAGAATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS GCA 90 bp | GGCCTTGGCTGCAAATTCATTCTTGGCTTTGTAGAAGGCATCAGCTaGCGTCTGCAGAGCTGCCACTCGCCCTTCAATACGCTCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLGCKFILGFVEGIS*RLQSCHSPFNTLFS Trigger: GCTGAAGAGCGTATTGAAGGGCGAGTGGCAGCTCTGCAGACGGCAGCTGATGCCTTCTACAAAGCCAAGAATGAATTTGCAGCCAAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CAA 90 bp | TGGGTGAATAATAGCGAAGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCTCACTTCTTCTGGGCTaGTGCCCTGGCCCGCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: WVNNSEVHSVVLVSSWAGSLLLG*CPGPLN Trigger: ATTCAGCGGGCCAGGGCACAAGCCCAGAAGAAGTGA...GCCTGCCCATGAGCTTACAAGGACCACACTGTGCACTTCGCTATTATTCACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS TCA 90 bp | GGCACTCAGAGTAAAGCGATAGGCTCCTGTAAGGATGGCCACCCCTaGACCAAACTCAGTGTGAAAAATCCGGGCATCCAGGACACGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GTQSKAIGSCKDGHP*TKLSVKNPGIQDTV Trigger: AACCGTGTCCTGGATGCCCGGATTTTTCACACTGAGTTTGGTTCAGGGGTGGCCATCCTTACAGGAGCCTATCGCTTTACTCTGAGTGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
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| CDS GCA 90 bp | CTCAGTGCCAGTTTGCTCCTCTTCATCTTTAGGAGAAGAGGTACCTaGTCCCCTGAGCGTGGCTCATACTCCAGCAGCTTAATGGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LSASLLLFIFRRRGT*SPERGSYSSSLMAS Trigger: ACTGGCCATTAAGCTGCTGGAGTATGAGCCACGCTCAGGGGAGCAGGTACCTCTTCTCCTAAAGATGAAGAGGAGCAAACTGGCACTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CAA 90 bp | AGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCATGTCATGCTCTTCAGTCCTGAGCAGACTCTTTaGCATGTCTGGCTGGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SAQCGPCKLMGRHVMLFSPEQTL*HVWLVL Trigger: GAGCACCAGCCAGACATGCAAAAGAGTCTGCTCAGG...ACTGAAGAGCATGACATGCCTGCCCATGAGCTTACAAGGACCACACTGTGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CAA 90 bp | GGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTTAGCTACCCGCAGGAGCCTCATTaGATCCTCTGTGGCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: GEGFKLKLPGLVAKAFSYPQEPH*ILCGLG Trigger: GCCAAGGCCACAGAGGATCAAATGAGGCTCCTGCGG...GTAGCTAAAGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS GCA 90 bp | TCAAGGAAACACTTTCCAAATGAAGCCGCCCTGAGCAGACTCTTTTaGATGTCTGGCTGGTGCTCATGTCCTGCAGCCTCAATGCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRKHFPNEAALSRLF*MSGWCSCPAASMHC Trigger: GCAGTGCATTGAGGCTGCAGGACATGAGCACCAGCCAGACATGCAAAAGAGTCTGCTCAGGGCGGCTTCATTTGGAAAGTGTTTCCTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CCA 90 bp | GTGGTAAGCCAGATGCAGAGTAGATCTCCAGTACTGGCCGCACGCTaGCAGCTTTCTCTTTTCTCCAACAGTTCCTCAGTAGAGCAATGG | + |
|
Preference number: 5 (lower is better) Translates to: VVSQMQSRSPVLAAR*QLSLFSNSSSVEQW Trigger: CCATTGCTCTACTGAGGAACTGTTGGAGAAAAGAGAAAGCTGCCAGCGTGCGGCCAGTACTGGAGATCTACTCTGCATCTGGCTTACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
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| CDS-3UTR CAA 90 bp | TGGGTGAATAATAGCGAAGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCTCACACAGCTTCTCCTaGAGTGATGCTGTCCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: WVNNSEVHSVVLVSSWAGSHSFS*SDAVPI Trigger: GATGGGGACAGCATCACTCAAGGAGAAGCTGTGTGA...GCCTGCCCATGAGCTTACAAGGACCACACTGTGCACTTCGCTATTATTCACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CAA 90 bp | GGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTTAGCTACAGCTGCTCTGCCCGCTaGTTGTGGCCTCCAAGGATA | + |
|
Preference number: 5 (lower is better) Translates to: GEGFKLKLPGLVAKAFSYSCSAR*LWPPRI Trigger: TATCCTTGGAGGCCACAACAAGCGGGCAGAGCAGCT...GTAGCTAAAGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CAA 90 bp | TGGGTGAATAATAGCGAAGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCTTGAGGTCACCCACATaGGCACTCAGAGTAAAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: WVNNSEVHSVVLVSSWAGLRSPT*ALRVKR Trigger: TCGCTTTACTCTGAGTGCCAATGTGGGTGACCTCAA...GCCTGCCCATGAGCTTACAAGGACCACACTGTGCACTTCGCTATTATTCACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CAA 90 bp | GCCACCTGGCCAGCCCAAATCCTTCTTTTGATACGTATTTGCTGTTATAGATTCGGGGGAGCCCGGATGTaGCAGTTGAACTCACACAGC | + |
|
Preference number: 5 (lower is better) Translates to: ATWPAQILLLIRICCYRFGGARM*QLNSHS Trigger: GCTGTGTGAGTTCAACTGCAACATCCGGGCTCCCCC...GAATCTATAACAGCAAATACGTATCAAAAGAAGGATTTGGGCTGGCCAGGTGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CAA 90 bp | GGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTTAGCTACCAAAGCCTTGACCTTTaGTTCAGGGCCCACACGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GEGFKLKLPGLVAKAFSYQSLDL*FRAHTG Trigger: TCCCGTGTGGGCCCTGAACAAAAGGTCAAGGCTTTG...GTAGCTAAAGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CAA 90 bp | TGGTGGCAAAAGCCTTTAGCTACTGAGCCACCTGGCCAGCCCAAATCCTTCTTTTTGCTCAGTGCCAGTTaGCTCCTCTTCATCTTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: WWQKPLATEPPGQPKSFFLLSAS*LLFIFR Trigger: CCTAAAGATGAAGAGGAGCAAACTGGCACTGAGCAA...AAAGAAGGATTTGGGCTGGCCAGGTGGCTCAGTAGCTAAAGGCTTTTGCCACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CAA 90 bp | CTATTCCCAACCTCAATACAATCAAATATGCAGAGTTCTGCTGCAGTAGCTAGAATGCTTTCAGGCGCATaGCCCACCACCATCAGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: LFPTSIQSNMQSSAAVARMLSGA*PTTISR Trigger: GCGGCTGATGGTGGTGGGCAATGCGCCTGAAAGCAT...TCTAGCTACTGCAGCAGAACTCTGCATATTTGATTGTATTGAGGTTGGGAATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS TCA 90 bp | GCAGCAATGTCAGAGTATGAAACACCAGGCGTGTCACCCAGCTTCTaGTTAATAGCCCGTGCTACATCTTCATCTGAGACATCTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: AAMSEYETPGVSPSF*LIARATSSSETSFC Trigger: GCAGAAAGATGTCTCAGATGAAGATGTAGCACGGGCTATTAATCAGAAGCTGGGTGACACGCCTGGTGTTTCATACTCTGACATTGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CAA 90 bp | GGAGAAGGGTTTAAACTCAAGTTGCCTGGCTTGGTGGCAAAAGCCTTTAGCTACGCCATTGAGGCAATTTaGAAGATCTCTTCACTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: GEGFKLKLPGLVAKAFSYAIEAI*KISSLA Trigger: GGCCAGTGAAGAGATCTTCAAAATTGCCTCAATGGC...GTAGCTAAAGGCTTTTGCCACCAAGCCAGGCAACTTGAGTTTAAACCCTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CAA 90 bp | GAAGTGCACAGTGTGGTCCTTGTAAGCTCATGGGCAGGCATGTCATGCTCTTCATTCTTGGCCTCATGTTaGTTATGCTGTTTCATGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EVHSVVLVSSWAGMSCSSFLASC*LCCFMQ Trigger: CTGCATGAAACAGCATAACAAACATGAGGCCAAGAA...TGAAGAGCATGACATGCCTGCCCATGAGCTTACAAGGACCACACTGTGCACTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CCA 90 bp | AGATCTCTACAAAGGGCAGGTAACCAATCGGTGATTTCTTGCTTTTaGAAAACTTCTCCAGCTCCTCCCAATCTTCCAAATCTGCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RSLQRAGNQSVISCF*KTSPAPPNLPNLPG Trigger: CCCTGGCAGATTTGGAAGATTGGGAGGAGCTGGAGAAGTTTTCCAAAAGCAAGAAATCACCGATTGGTTACCTGCCCTTTGTAGAGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CAA 90 bp | CTATTCCCAACCTCAATACAATCAAATATGCAGAGTTCTGCTGCAGTAGCTAGAGCCCGGATGTTGCAGTaGAACTCACACAGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LFPTSIQSNMQSSAAVARARMLQ*NSHSFS Trigger: GGAGAAGCTGTGTGAGTTCAACTGCAACATCCGGGC...TCTAGCTACTGCAGCAGAACTCTGCATATTTGATTGTATTGAGGTTGGGAATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS GCA 90 bp | CACGGGAAGCATACTTCTTGGCCTCATGTTTGTTATGCTGTTTCATaGAGATCTCTACAAAGGGCAGGTAACCAATCGGTGATTTCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: HGKHTSWPHVCYAVS*RSLQRAGNQSVISC Trigger: GCAAGAAATCACCGATTGGTTACCTGCCCTTTGTAGAGATCTGCATGAAACAGCATAACAAACATGAGGCCAAGAAGTATGCTTCCCGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CAA 90 bp | TTCAGTATGTTTTGTATATGGGTAAAGATCAGAGGAGAAGGGTTTAAACTCAAGACAACAGCCCTTTCCTaGCTCCGAGGACGGCTACAC | + |
|
Preference number: 5 (lower is better) Translates to: FSMFCIWVKIRGEGFKLKTTALS*LRGRLH Trigger: GTGTAGCCGTCCTCGGAGCAAGGAAAGGGCTGTTGT...CTTGAGTTTAAACCCTTCTCCTCTGATCTTTACCCATATACAAAACATACTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CAA 90 bp | CTATTCCCAACCTCAATACAATCAAATATGCAGAGTTCTGCTGCAGTAGCTAGACGGGAAGCATACTTCTaGGCCTCATGTTTGTTATGC | + |
|
Preference number: 5 (lower is better) Translates to: LFPTSIQSNMQSSAAVARREAYF*ASCLLC Trigger: GCATAACAAACATGAGGCCAAGAAGTATGCTTCCCG...TCTAGCTACTGCAGCAGAACTCTGCATATTTGATTGTATTGAGGTTGGGAATAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS-3UTR CAA 90 bp | GCCCAAATCCTTCTTTTGATACGTATTTGCTGTTATAGATTCAGAACTGTTGTGACAAGAAGCAAAGCCTaGACCTTTTGTTCAGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AQILLLIRICCYRFRTVVTRSKA*TFCSGP Trigger: GGGCCCTGAACAAAAGGTCAAGGCTTTGCTTCTTGT...CACAACAGTTCTGAATCTATAACAGCAAATACGTATCAAAAGAAGGATTTGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CAA 90 bp | ACCACCATCAGCCGCCTCTCCCAGGCCACAACAACAGCCCTTTCCTaGCTCCGAGGACGGCTACACCAGACCATCTGCTTCGGGGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TTISRLSQATTTALS*LRGRLHQTICFGGA Trigger: GGCTCCCCCGAAGCAGATGGTCTGGTGTAGCCGTCCTCGGAGCAAGGAAAGGGCTGTTGTTGTGGCCTGGGAGAGGCGGCTGATGGTGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
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| CDS GCA 72 bp | GCCGCCTCTCCCAGGCCACAACAACAGCCCTTTCCTTaGTCCGAGGACGGCTACACCAGACCATCTGCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: AASPRPQQQPFP*SEDGYTRPSAS Trigger: CGAAGCAGATGGTCTGGTGTAGCCGTCCTCGGAGCAAGGAAAGGGCTGTTGTTGTGGCCTGGGAGAGGCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
||
| CDS CCA 72 bp | TCATGTCCTGCAGCCTCAATGCACTGCTGCACAGCCTaGATCAGCTGGCCCAGTTCCTGGATCTCCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SCPAASMHCCTA*ISWPSSWISRR Trigger: CCTGCGGGAGATCCAGGAACTGGGCCAGCTGATCCAGGCTGTGCAGCAGTGCATTGAGGCTGCAGGACATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS CAA 72 bp | AGCCGCCTCTCCCAGGCCACAACAACAGCCCTTTCCTaGCTCCGAGGACGGCTACACCAGACCATCTGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SRLSQATTTALS*LRGRLHQTICF Trigger: GAAGCAGATGGTCTGGTGTAGCCGTCCTCGGAGCAAGGAAAGGGCTGTTGTTGTGGCCTGGGAGAGGCGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
||
| CDS TCA 72 bp | GACCCCCATAGGGTGCAGCAGCCACCAGGCAATCCTTaGGCTCCTCCTTCAGGTCCCAGTCCATGCTGTACA | + |
|
Preference number: 6 (lower is better) Translates to: DPHRVQQPPGNP*APPSGPSPCCT Trigger: TGTACAGCATGGACTGGGACCTGAAGGAGGAGCTCAAGGATTGCCTGGTGGCTGCTGCACCCTATGGGGGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
||
| CDS GCA 72 bp | CCTCATCGAGCACAAACTGGATGCTTTCAGGCGCATTaGCCACCACCATCAGCCGCCTCTCCCAGGCCACAA | + |
|
Preference number: 6 (lower is better) Translates to: PHRAQTGCFQAH*PPPSAASPRPQ Trigger: TTGTGGCCTGGGAGAGGCGGCTGATGGTGGTGGGCAATGCGCCTGAAAGCATCCAGTTTGTGCTCGATGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
||
| CDS CAA 72 bp | TCCTCATCGAGCACAAACTGGATGCTTTCAGGCGCATaGCCCACCACCATCAGCCGCCTCTCCCAGGCCACA | + |
|
Preference number: 6 (lower is better) Translates to: SSSSTNWMLSGA*PTTISRLSQAT Trigger: TGTGGCCTGGGAGAGGCGGCTGATGGTGGTGGGCAATGCGCCTGAAAGCATCCAGTTTGTGCTCGATGAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
||
| CDS CAA 90 bp | CGAGGACGGCTACACCAGACCATCTGCTTCGGGGGAGCCCGGATGTaGCAGTTGAACTCACACAGCTTCTCCTTGAGTGATGCTGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: RGRLHQTICFGGARM*QLNSHSFSLSDAVP Trigger: GGGGACAGCATCACTCAAGGAGAAGCTGTGTGAGTTCAACTGCAACATCCGGGCTCCCCCGAAGCAGATGGTCTGGTGTAGCCGTCCTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
||
| CDS TCA 72 bp | GTGTGGTACTCGGTCGTGGCACAGTGTGGTCCAACATaGGGGTGCACTTTGCAGACCTGGCACCTCTGGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VWYSVVAQCGPT*GCTLQTWHLWH Trigger: ATGCCAGAGGTGCCAGGTCTGCAAAGTGCACCCTCATGTTGGACCACACTGTGCCACGACCGAGTACCACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
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| CDS GCA 72 bp | GCCGCCCTGAGCAGACTCTTTTGCATGTCTGGCTGGTaGTCATGTCCTGCAGCCTCAATGCACTGCTGCACA | + |
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Preference number: 6 (lower is better) Translates to: AALSRLFCMSGW*SCPAASMHCCT Trigger: TGTGCAGCAGTGCATTGAGGCTGCAGGACATGAGCACCAGCCAGACATGCAAAAGAGTCTGCTCAGGGCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CCA 72 bp | GAAGCCGCCCTGAGCAGACTCTTTTGCATGTCTGGCTaGTGCTCATGTCCTGCAGCCTCAATGCACTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: EAALSRLFCMSG*CSCPAASMHCC Trigger: GCAGCAGTGCATTGAGGCTGCAGGACATGAGCACCAGCCAGACATGCAAAAGAGTCTGCTCAGGGCGGCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CCA 72 bp | TGGCCCGCTGAATCTTGTCAGCTATGGCCCCATCTGTaGCTCCAGTGCAGTGGGACAAAACGAGGCTCAGCT | + |
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Preference number: 6 (lower is better) Translates to: WPAESCQLWPHL*LQCSGTKRGSA Trigger: AGCTGAGCCTCGTTTTGTCCCACTGCACTGGAGCCACAGATGGGGCCATAGCTGACAAGATTCAGCGGGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CAA 72 bp | GGGATGCGAAAGTCACGTGCCAGCTGCTCTGCCCGCTaGTTGTGGCCTCCAAGGATAAGAGTGGTGACAGTG | + |
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Preference number: 6 (lower is better) Translates to: GMRKSRASCSAR*LWPPRIRVVTV Trigger: CACTGTCACCACTCTTATCCTTGGAGGCCACAACAAGCGGGCAGAGCAGCTGGCACGTGACTTTCGCATCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS GCA 72 bp | GGCTTTGTAGAAGGCATCAGCTGCCGTCTGCAGAGCTaGCACTCGCCCTTCAATACGCTCTTCAGCGGCATA | + |
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Preference number: 6 (lower is better) Translates to: GFVEGISCRLQS*HSPFNTLFSGI Trigger: TATGCCGCTGAAGAGCGTATTGAAGGGCGAGTGGCAGCTCTGCAGACGGCAGCTGATGCCTTCTACAAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CCA 72 bp | CGAAAGTCACGTGCCAGCTGCTCTGCCCGCTTGTTGTaGCCTCCAAGGATAAGAGTGGTGACAGTGTCGTGT | + |
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Preference number: 6 (lower is better) Translates to: RKSRASCSARLL*PPRIRVVTVSC Trigger: ACACGACACTGTCACCACTCTTATCCTTGGAGGCCACAACAAGCGGGCAGAGCAGCTGGCACGTGACTTTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CAA 72 bp | ATGCGAAAGTCACGTGCCAGCTGCTCTGCCCGCTTGTaGTGGCCTCCAAGGATAAGAGTGGTGACAGTGTCG | + |
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Preference number: 6 (lower is better) Translates to: MRKSRASCSARL*WPPRIRVVTVS Trigger: CGACACTGTCACCACTCTTATCCTTGGAGGCCACAACAAGCGGGCAGAGCAGCTGGCACGTGACTTTCGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CAA 72 bp | CTACACCAGACCATCTGCTTCGGGGGAGCCCGGATGTaGCAGTTGAACTCACACAGCTTCTCCACTGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: LHQTICFGGARM*QLNSHSFSTAE Trigger: CTCTGCAGTGGAGAAGCTGTGTGAGTTCAACTGCAACATCCGGGCTCCCCCGAAGCAGATGGTCTGGTGTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128994.8 |
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| CDS CCA 72 bp | CCAGAAGAATGTGTGGTACTCGGTCGTGGCACAGTGTaGTCCAACATGAGGGTGCACTTTGCAGACCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: PEECVVLGRGTV*SNMRVHFADLA Trigger: TGCCAGGTCTGCAAAGTGCACCCTCATGTTGGACCACACTGTGCCACGACCGAGTACCACACATTCTTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
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| CDS CCA 72 bp | GGTCCTACAGCCAGAAGAATGTGTGGTACTCGGTCGTaGCACAGTGTGGTCCAACATGAGGGTGCACTTTGC | + |
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Preference number: 6 (lower is better) Translates to: GPTARRMCGTRS*HSVVQHEGALC Trigger: GCAAAGTGCACCCTCATGTTGGACCACACTGTGCCACGACCGAGTACCACACATTCTTCTGGCTGTAGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
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| CDS GCA 72 bp | CTTCATGCAGGAACTCATGGGTGCTTCGGGAGAAGATaGGGACCCCATCAAGCTCAGGCACTAAGTAGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LHAGTHGCFGRR*GPHQAQALSRS Trigger: ACTCCTACTTAGTGCCTGAGCTTGATGGGGTCCGCATCTTCTCCCGAAGCACCCATGAGTTCCTGCATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
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| CDS GCA 72 bp | CACTTTCCAAATGAAGCCGCCCTGAGCAGACTCTTTTaGATGTCTGGCTGGTGCTCATGTCCTGCAGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: HFPNEAALSRLF*MSGWCSCPAAS Trigger: TGAGGCTGCAGGACATGAGCACCAGCCAGACATGCAAAAGAGTCTGCTCAGGGCGGCTTCATTTGGAAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS GCA 72 bp | CAGCCAGCTTTAACCACCATAGTCTCTTATCAGGGATaGGAAAGTCACGTGCCAGCTGCTCTGCCCGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: QPALTTIVSYQG*ESHVPAALPAC Trigger: ACAAGCGGGCAGAGCAGCTGGCACGTGACTTTCGCATCCCTGATAAGAGACTATGGTGGTTAAAGCTGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS GCA 72 bp | CAGCTCTGTTTCATTCCGGTGCTCAATAGCCACCTCTaGAGCCTGAGCCACATCCCCAACAAGAAGCAAAGC | + |
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Preference number: 6 (lower is better) Translates to: QLCFIPVLNSHL*SLSHIPNKKQS Trigger: GCTTTGCTTCTTGTTGGGGATGTGGCTCAGGCTGCAGAGGTGGCTATTGAGCACCGGAATGAAACAGAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CAA 72 bp | CTACACCAGACCATCTGCTTCGGGGGAGCCCGGATGTaGCAGTTGAACTCACACAGCTTCTCCTTGAGTGAT | + |
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Preference number: 6 (lower is better) Translates to: LHQTICFGGARM*QLNSHSFSLSD Trigger: ATCACTCAAGGAGAAGCTGTGTGAGTTCAACTGCAACATCCGGGCTCCCCCGAAGCAGATGGTCTGGTGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS TCA 72 bp | GCCACAGCCATAGGCCCTCGCAGCAATGTCAGAGTATaGAACACCAGGCGTGTCACCCAGCTTCTGATTAAT | + |
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Preference number: 6 (lower is better) Translates to: ATAIGPRSNVRV*NTRRVTQLLIN Trigger: ATTAATCAGAAGCTGGGTGACACGCCTGGTGTTTCATACTCTGACATTGCTGCGAGGGCCTATGGCTGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CAA 72 bp | AGCCACATCCCCAACAAGAAGCAAAGCCTTGACCTTTaGTTCAGGGCCCACACGGGAAGCATACTTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: SHIPNKKQSLDL*FRAHTGSILLG Trigger: GCCAAGAAGTATGCTTCCCGTGTGGGCCCTGAACAAAAGGTCAAGGCTTTGCTTCTTGTTGGGGATGTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CAA 90 bp | ACCAGGTCAGTGTCTCCACTCTCAATAGCCTTGCTCAGTGCCAGTTaGCTCCTCTTCATCTTTAGGAGAAGAGGTACCTGCTCCCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: TRSVSPLSIALLSAS*LLFIFRRRGTCSPE Trigger: CTCAGGGGAGCAGGTACCTCTTCTCCTAAAGATGAAGAGGAGCAAACTGGCACTGAGCAAGGCTATTGAGAGTGGAGACACTGACCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CAA 90 bp | TGCAGCCTGAGCCACATCCCCAACAAGAAGCAAAGCCTTGACCTTTaGTTCAGGGCCCACACGGGAAGCATACTTCTTGGCCTCATGTTT | + |
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Preference number: 6 (lower is better) Translates to: CSLSHIPNKKQSLDL*FRAHTGSILLGLMF Trigger: AAACATGAGGCCAAGAAGTATGCTTCCCGTGTGGGCCCTGAACAAAAGGTCAAGGCTTTGCTTCTTGTTGGGGATGTGGCTCAGGCTGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS TCA 72 bp | CTAACAGCAGTGCTCCAGGGGCCATTGAGGCAATTTTaGAGATCTCTTCACTGGCCACTGGGACTTCATGCA | + |
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Preference number: 6 (lower is better) Translates to: LTAVLQGPLRQF*RSLHWPLGLHA Trigger: TGCATGAAGTCCCAGTGGCCAGTGAAGAGATCTTCAAAATTGCCTCAATGGCCCCTGGAGCACTGCTGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028900.11 ENSMUST00000128994.8 |
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| CDS GCA 72 bp | TGTCCCCATCCAGATGTAGCCTGTGTCTGTGAAGAGTaGCAGGTAACGATACGTGAAGGATACAGCCATCTG | + |
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Preference number: 6 (lower is better) Translates to: CPHPDVACVCEE*QVTIREGYSHL Trigger: CAGATGGCTGTATCCTTCACGTATCGTTACCTGGCACTCTTCACAGACACAGGCTACATCTGGATGGGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS GCA 72 bp | TGCAAATTCATTCTTGGCTTTGTAGAAGGCATCAGCTaGCGTCTGCAGAGCTGCCACTCGCCCTTCAATACG | + |
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Preference number: 6 (lower is better) Translates to: CKFILGFVEGIS*RLQSCHSPFNT Trigger: CGTATTGAAGGGCGAGTGGCAGCTCTGCAGACGGCAGCTGATGCCTTCTACAAAGCCAAGAATGAATTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CAA 72 bp | GTGTCTCCACTCTCAATAGCCTTGCTCAGTGCCAGTTaGCTCCTCTTCATCTTTAGGAGAAGAGGTACCTGC | + |
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Preference number: 6 (lower is better) Translates to: VSPLSIALLSAS*LLFIFRRRGTC Trigger: GCAGGTACCTCTTCTCCTAAAGATGAAGAGGAGCAAACTGGCACTGAGCAAGGCTATTGAGAGTGGAGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CAA 72 bp | GGGCCCACACGGGAAGCATACTTCTTGGCCTCATGTTaGTTATGCTGTTTCATGCAGATCTCTACAAAGGGC | + |
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Preference number: 6 (lower is better) Translates to: GPTREAYFLASC*LCCFMQISTKG Trigger: GCCCTTTGTAGAGATCTGCATGAAACAGCATAACAAACATGAGGCCAAGAAGTATGCTTCCCGTGTGGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CCA 72 bp | TTACAGAACTGTCGATACAAACTCAGGGCCATGGGTTaGTTCCGGAGAGTCATGAAAAAGTCTCCTCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: LQNCRYKLRAMG*FRRVMKKSPRL Trigger: CAACCGAGGAGACTTTTTCATGACTCTCCGGAACCAACCCATGGCCCTGAGTTTGTATCGACAGTTCTGTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CAA 72 bp | CTTACAGAACTGTCGATACAAACTCAGGGCCATGGGTaGGTTCCGGAGAGTCATGAAAAAGTCTCCTCGGTT | + |
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Preference number: 6 (lower is better) Translates to: LTELSIQTQGHG*VPESHEKVSSV Trigger: AACCGAGGAGACTTTTTCATGACTCTCCGGAACCAACCCATGGCCCTGAGTTTGTATCGACAGTTCTGTAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CAA 90 bp | CTCCTGATGCTTACAGAACTGTCGATACAAACTCAGGGCCATGGGTaGGTTCCGGAGAGTCATGAAAAAGTCTCCTCGGTTGAGTTCATT | + |
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Preference number: 6 (lower is better) Translates to: LLMLTELSIQTQGHG*VPESHEKVSSVEFI Trigger: AATGAACTCAACCGAGGAGACTTTTTCATGACTCTCCGGAACCAACCCATGGCCCTGAGTTTGTATCGACAGTTCTGTAAGCATCAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS TCA 72 bp | TCAGAGTATGAAACACCAGGCGTGTCACCCAGCTTCTaGTTAATAGCCCGTGCTACATCTTCATCTGAGACA | + |
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Preference number: 6 (lower is better) Translates to: SEYETPGVSPSF*LIARATSSSET Trigger: TGTCTCAGATGAAGATGTAGCACGGGCTATTAATCAGAAGCTGGGTGACACGCCTGGTGTTTCATACTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS TCA 72 bp | CATGCAGATCTCTACAAAGGGCAGGTAACCAATCGGTaGTTTCTTGCTTTTGGAAAACTTCTCCAGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: HADLYKGQVTNR*FLAFGKLLQLL Trigger: GAGGAGCTGGAGAAGTTTTCCAAAAGCAAGAAATCACCGATTGGTTACCTGCCCTTTGTAGAGATCTGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS GCA 72 bp | ATGAAAAAGTCTCCTCGGTTGAGTTCATTCTTTAGGTaGAGCAACACTGTAAACACCAGGTCAGTGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: MKKSPRLSSFFR*SNTVNTRSVSP Trigger: TGGAGACACTGACCTGGTGTTTACAGTGTTGCTGCACCTAAAGAATGAACTCAACCGAGGAGACTTTTTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS GCA 72 bp | CATACTTCTTGGCCTCATGTTTGTTATGCTGTTTCATaGAGATCTCTACAAAGGGCAGGTAACCAATCGGTG | + |
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Preference number: 6 (lower is better) Translates to: HTSWPHVCYAVS*RSLQRAGNQSV Trigger: CACCGATTGGTTACCTGCCCTTTGTAGAGATCTGCATGAAACAGCATAACAAACATGAGGCCAAGAAGTATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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| CDS CCA 72 bp | CAAAGGGCAGGTAACCAATCGGTGATTTCTTGCTTTTaGAAAACTTCTCCAGCTCCTCCCAATCTTCCAAAT | + |
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Preference number: 6 (lower is better) Translates to: QRAGNQSVISCF*KTSPAPPNLPN Trigger: ATTTGGAAGATTGGGAGGAGCTGGAGAAGTTTTCCAAAAGCAAGAAATCACCGATTGGTTACCTGCCCTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028900.11 |
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