RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VPS13B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000037646

Ensembl transcript IDs: ENSMUST00000048646.9

Found 668 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCCACATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATaGATACCATCAGTGGGTAATGAGACCCTGAGAGTCACTAACTCC +
Preference number: 1 (lower is better)
Translates to: ATFQLKGRNRLQACA*IPSVGNETLRVTNS
Trigger: GGAGTTAGTGACTCTCAGGGTCTCATTACCCACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAATGTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
3UTR CAA 90 bp GTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTCAGTGTCCTTaGAAATCAGTGGCCCTGTCTTACTGCCACATTTCAGTTGAAGGG +
Preference number: 2 (lower is better)
Translates to: VGMCAQQTEVVGQCP*KSVALSYCHISVEG
Trigger: CCCTTCAACTGAAATGTGGCAGTAAGACAGGGCCACTGATTTCAAAGGACACTGACCTACAACCTCAGTCTGCTGAGCACACATCCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
3UTR-3UTR TCA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGGCCTTGTGTCCATGTTaGATGTTAGAATTCAGTCTT +
Preference number: 2 (lower is better)
Translates to: LSGLKSLSALRLESLTHPALCPC*MLEFSL
Trigger: AAGACTGAATTCTAACATTCAACATGGACACAAGGC...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
3UTR-3UTR TCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGGTGTGCTCAGCAGACTaGGGTTGTAGGTCAGTGTCC +
Preference number: 2 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVVCSAD*GCRSVS
Trigger: GGACACTGACCTACAACCTCAGTCTGCTGAGCACAC...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
3UTR-3UTR GCA 90 bp ACCAAGGACTTGTTTTCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGGTTAGAATTCAGTCTTaGACAGCAAAAACCAAACAC +
Preference number: 2 (lower is better)
Translates to: TKDLFSRTSAVVGMCAQQVRIQS*TAKTKH
Trigger: GTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAAC...CTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGAAAACAAGTCCTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
3UTR-3UTR TCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCATTTATAGGATTTTGCTaGTCATTGGTTCTCCCATCT +
Preference number: 2 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPFIGFC*SLVLPS
Trigger: AGATGGGAGAACCAATGATCAGCAAAATCCTATAAA...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
3UTR-3UTR TCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGGTAGAACACAGACTTTaGGTGGAATTCACATTGTTT +
Preference number: 2 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVVEHRL*VEFTLF
Trigger: AAACAATGTGAATTCCACTCAAAGTCTGTGTTCTAC...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
3UTR TCA 72 bp CAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATaGATACCATCAGTGGGTAATGAGACCCTGAGAGTC +
Preference number: 3 (lower is better)
Translates to: QLKGRNRLQACA*IPSVGNETLRV
Trigger: GACTCTCAGGGTCTCATTACCCACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
3UTR-3UTR CAA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGAGGCCTTGTGTCCATGTaGAATGTTAGAATTCAGTCT +
Preference number: 3 (lower is better)
Translates to: LTPEGSGDARSCIKALPRGLVSM*NVRIQS
Trigger: AGACTGAATTCTAACATTCAACATGGACACAAGGCC...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
3UTR GCA 72 bp GGTCAGTGTCCTTTGAAATCAGTGGCCCTGTCTTACTaGCACATTTCAGTTGAAGGGAAGGAACAGATTGCA +
Preference number: 3 (lower is better)
Translates to: GQCPLKSVALSY*HISVEGKEQIA
Trigger: TGCAATCTGTTCCTTCCCTTCAACTGAAATGTGGCAGTAAGACAGGGCCACTGATTTCAAAGGACACTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
3UTR CCA 72 bp CAGACTTTATCAAATCAATTCAACAGAGCAACTATCTaGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTC +
Preference number: 3 (lower is better)
Translates to: QTLSNQFNRATI*TEVTVSLKAGV
Trigger: GACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAGTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGAGGCAGGCTCCAGCACTaGGCGCTGTCGGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRGRLQH*ALSAPG
Trigger: ACCAGGAGCCGACAGCGCTCAGTGCTGGAGCCTGCC...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGACGGCATGGTCCACAGTaGAGGGCTCTGACCAACGCC +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRRHGPQ*RALTNA
Trigger: GGCGTTGGTCAGAGCCCTTCACTGTGGACCATGCCG...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ACCAAGGACTTGTTTTCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGGGGAGGCTCTTCCCCTaGGAGGAGAGCAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: TKDLFSRTSAVVGMCAQQGRLFP*EESRHR
Trigger: CCTGTGCCTGCTCTCCTCCCAGGGGAAGAGCCTCCC...CTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGAAAACAAGTCCTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTTGTTGGCACTCCTCCTaGGCCACTGCCTTTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGCWHSS*ATAFLW
Trigger: CCAGAGAAAGGCAGTGGCTCAGGAGGAGTGCCAACA...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCGGGCAATGCGGTGCTaGCTGGCACCACTGTACTGC +
Preference number: 4 (lower is better)
Translates to: LSGLKSLSALRLESLTHPRAMRC*LAPLYC
Trigger: GCAGTACAGTGGTGCCAGTCAGCACCGCATTGCCCG...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTGAAACTCTCCTCCAATaGTGGCTGGCAGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGETLLQ*WLAGSS
Trigger: GCTGGAGCCTGCCAGCCATCATTGGAGGAGAGTTTC...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGAATAGTGCATGGCCAGTaGGTGCACCAGCTGCCTTGC +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRIVHGQ*VHQLPC
Trigger: GCAAGGCAGCTGGTGCACGCACTGGCCATGCACTAT...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTTCCTCCAATGATGGCTaGCAGGCTCCAGCACTGAGC +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGSSNDG*QAPALS
Trigger: GCTCAGTGCTGGAGCCTGCCAGCCATCATTGGAGGA...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTCAGCAGCATAGTGCATaGCCAGTGCGTGCACCAGCT +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGQQHSA*PVRAPA
Trigger: AGCTGGTGCACGCACTGGCCATGCACTATGCTGCTG...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTTTCATGCTCTTGGCCTaGACCCCTCACCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGFMLLA*TPHQNH
Trigger: GTGGTTCTGGTGAGGGGTTCAGGCCAAGAGCATGAA...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTAGTGCGTGCACCAGCTaGCTTGCTGTGGTGAACACT +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGSACTS*LAVVNT
Trigger: AGTGTTCACCACAGCAAGGCAGCTGGTGCACGCACT...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTCTCCGAGGGCTTGTCTaGCAGATGACCTTGTGGATG +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGLRGLV*QMTLWM
Trigger: CATCCACAAGGTCATCTGCCAGACAAGCCCTCGGAG...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGAGGAGACTCTGCACCCTaGAATACTGAGCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRGDSAP*NTEQGL
Trigger: CAGACCCTGCTCAGTATTCCAGGGTGCAGAGTCTCC...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTATGATGTGGTCCCTCTaGAGACTCCGCTCACGAAGG +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGMMWSL*RLRSRR
Trigger: CCTTCGTGAGCGGAGTCTCCAGAGGGACCACATCAT...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGACATGCTGCCCGAAGTTaGCAAGCACAGAGTCCACTA +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRHAARS*QAQSPL
Trigger: TAGTGGACTCTGTGCTTGTCAACTTCGGGCAGCATG...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGAAGCTGTGGGGATTTATaGGAACGCCAGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRSCGDL*ERQLYW
Trigger: CCAGTACAGCTGGCGTTCTCATAAATCCCCACAGCT...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAACAGATGGGCTGCATGTaGTGGTGTCTGGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQQMGCM*WCLVEL
Trigger: CAGCTCCACCAGACACCAGCACATGCAGCCCATCTG...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGACCCTGTGAACAGCTGTaGATGGTGACCAGACATCCT +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRPCEQL*MVTRHP
Trigger: AGGATGTCTGGTCACCATGCACAGCTGTTCACAGGG...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAAGTGCACCAGCTGCCTTaGTGTGGTGAACACTGGTCC +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQVHQLP*CGEHWS
Trigger: GGACCAGTGTTCACCACAGCAAGGCAGCTGGTGCAC...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGATCTGTTTCTGAAGCGTaGCTGTGTCCAGCTCTGACG +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRSVSEA*LCPALT
Trigger: CGTCAGAGCTGGACACAGCCACGCTTCAGAAACAGA...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGACTTCCAAGGCTTTGCTaGAGACCAGGAGACTCTGCA +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRLPRLC*RPGDSA
Trigger: TGCAGAGTCTCCTGGTCTCCAGCAAAGCCTTGGAAG...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGAAGCTTCAGGGAGGCATaGATGCTGATGAGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRSFREA*MLMSRF
Trigger: GAACCTGCTCATCAGCATCCATGCCTCCCTGAAGCT...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGACTGTTGATGCATGATTaGTGCAGGGTCAGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRLLMHD*CRVSPK
Trigger: CTTGGGACTGACCCTGCATCAATCATGCATCAACAG...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGGGTCTTCCAGTTCACTaGCCATGCAGACCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LSGLKSLSALRLESLTHPGLPVH*PCRPLC
Trigger: GCACAGAGGTCTGCATGGTCAGTGAACTGGAAGACC...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAAGGCTTGTCTGGCAGATaGCCTTGTGGATGCATGGAG +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQGLSGR*PCGCME
Trigger: CTCCATGCATCCACAAGGTCATCTGCCAGACAAGCC...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTGCTGCCGAACAACAGTaGCTCCGAGGGCTTGTCTGG +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISAAEQQ*LRGLVW
Trigger: CCAGACAAGCCCTCGGAGTCACTGTTGTTCGGCAGC...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTAATGTGCTTGACGAATaGTGTGGTCCCTCTGGAGAC +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGNVLDE*CGPSGD
Trigger: GTCTCCAGAGGGACCACATCATTCGTCAAGCACATT...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCGAGAGGGCCGGGCAATaGGGTGCTGACTGGCACCAC +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSAERAGQ*GADWHH
Trigger: GTGGTGCCAGTCAGCACCGCATTGCCCGGCCCTCTC...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAACGAACTGGAAGGACATaGACAGGGATGGGACGAACC +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQRTGRT*TGMGRT
Trigger: GGTTCGTCCCATCCCTGTGCATGTCCTTCCAGTTCG...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTCCATCTGTCCACAGATaGCAAAGGGTTTCACCACAG +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGPSVHR*QRVSPQ
Trigger: CTGTGGTGAAACCCTTTGGCATCTGTGGACAGATGG...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGATGGGCTGCATGTGCTaGTGTCTGGTGGAGCTGTAC +
Preference number: 4 (lower is better)
Translates to: LSGLKSLSALRLESLTHPMGCMC*CLVELY
Trigger: GTACAGCTCCACCAGACACCAGCACATGCAGCCCAT...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGATTCCACGGTAACATTTaGGGACAGGAGGCTCATCCA +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRFHGNI*GQEAHP
Trigger: TGGATGAGCCTCCTGTCCCCAAATGTTACCGTGGAA...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ACCAAGGACTTGTTTTCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGGGACATGCACAGGGATaGGACGAACCATGGGGTAAA +
Preference number: 4 (lower is better)
Translates to: TKDLFSRTSAVVGMCAQQGHAQG*DEPWGK
Trigger: TTTACCCCATGGTTCGTCCCATCCCTGTGCATGTCC...CTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGAAAACAAGTCCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTTACTGTAAGGCCAAGTaGGCTCCTGGGACTTTTCTG +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGYCKAK*APGTFL
Trigger: CAGAAAAGTCCCAGGAGCCCACTTGGCCTTACAGTA...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAAAAAGCTGGAAGAAGCTaGAGGGAGGCTCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQKAGRS*REALPL
Trigger: CAGGGGAAGAGCCTCCCTCCAGCTTCTTCCAGCTTT...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGAGCAGTGTTTAAGGAATaGACTACATGCTGCCCGAAG +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRAVFKE*TTCCPK
Trigger: CTTCGGGCAGCATGTAGTTCATTCCTTAAACACTGC...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTCTTAATGAGGGCTGTTaGTATGGGAACCGCACAATC +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGLNEGC*YGNRTI
Trigger: GATTGTGCGGTTCCCATATCAACAGCCCTCATTAAG...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGGGCTGTGTCCAGCTCTaGCGACCCCACAGCAGGCGT +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMGCVQL*RPHSRR
Trigger: ACGCCTGCTGTGGGGTCGTCAGAGCTGGACACAGCC...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTTTGGACCTTTGCCACTaGTGTGCTCCACTGTATACA +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGLDLCH*CAPLYT
Trigger: TGTATACAGTGGAGCACAGCAGTGGCAAAGGTCCAA...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGAAACCACAAGGGACCTaGAGCACATCACCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LSGLKSLSALRLESLTHPKPQGT*STSPRS
Trigger: AGACCTGGGTGATGTGCTGCAGGTCCCTTGTGGTTT...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTGTGAGTAGGTTGTTTTaGTTGGTGTCCTGTGCACAG +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGVSRLF*LVSCAQ
Trigger: CTGTGCACAGGACACCAAGCAAAACAACCTACTCAC...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGACCACCAATATCTGAATaGATGGCAAAGGCCGAAGTG +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRPPISE*MAKAEV
Trigger: CACTTCGGCCTTTGCCATCCATTCAGATATTGGTGG...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTGACCTTGTGGATGCATaGAGGCTTTCAAGCGATAGA +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGDLVDA*RLSSDR
Trigger: TCTATCGCTTGAAAGCCTCCATGCATCCACAAGGTC...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGAACTGCCAGGCTCAACTaGGTGATGAACATCCTGAAA +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRTARLN*VMNILK
Trigger: TTTCAGGATGTTCATCACCCAGTTGAGCCTGGCAGT...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGAGGTCAATCCCTCATATaGAAGCCTGAAGAAGTCCGA +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRGQSLI*KPEEVR
Trigger: TCGGACTTCTTCAGGCTTCCATATGAGGGATTGACC...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTGAAGGAAAGTCTTGTTaGCTTGTTGGACCTTTGCCA +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGEGKSC*LVGPLP
Trigger: TGGCAAAGGTCCAACAAGTCAACAAGACTTTCCTTC...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ACCAAGGACTTGTTTTCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGGACTTTGATGATGAGTaGAGCGGTTCGACCCTTGTA +
Preference number: 4 (lower is better)
Translates to: TKDLFSRTSAVVGMCAQQDFDDE*SGSTLV
Trigger: TACAAGGGTCGAACCGCTTCACTCATCATCAAAGTC...CTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGAAAACAAGTCCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTACCGTAGCCAGTCTGTaGCACAAGTTCTGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISTVASL*HKFCSS
Trigger: GGAGCTGCAGAACTTGTGTCACAGACTGGCTACGGT...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTACAAACGGAATCTCCTaGAGAGGTTCCATGTACTTG +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGTNGIS*RGSMYL
Trigger: CAAGTACATGGAACCTCTGCAGGAGATTCCGTTTGT...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAACTGGCACCACTGTACTaGTCTATTTGCACAATGCGG +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQLAPLY*SICTMR
Trigger: CCGCATTGTGCAAATAGAGCAGTACAGTGGTGCCAG...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCCCTCTTCGGCCAGGCTaGCGAACAACAGTGACTCCG +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLPLRPG*RTTVTP
Trigger: CGGAGTCACTGTTGTTCGGCAGCCTGGCCGAAGAGG...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp ACCAAGGACTTGTTTTCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGGTTGTGGCCCTGGATTaGCACTGTGTTTACACCATT +
Preference number: 4 (lower is better)
Translates to: TKDLFSRTSAVVGMCAQQVVALD*HCVYTI
Trigger: AATGGTGTAAACACAGTGGCAATCCAGGGCCACAAC...CTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGAAAACAAGTCCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCCTAAGCTGGCGGGGCTaGCGAGGATTTCCAGAGACC +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSALSWRG*RGFPET
Trigger: GGTCTCTGGAAATCCTCGGCAGCCCCGCCAGCTTAG...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACAGGCTCTCAGGGAGCTaGCGCCGCCACTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHRLSGS*RRHSSC
Trigger: GCAGGAGGAGTGGCGGCGGCAGCTCCCTGAGAGCCT...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGACCACAGAACATGTCTaGATAGAAGAGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LSGLKSLSALRLESLTHPTTEHV*IEEQLG
Trigger: CCCCAGCTGCTCTTCTATGCAGACATGTTCTGTGGT...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAAGTGTCCCTGGTATGCTaGTTTGTCCATGGTACCAAC +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQVSLVC*FVHGTN
Trigger: GTTGGTACCATGGACAAACCAGCATACCAGGGACAC...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTGCATGTGCTGGTGTCTaGTGGAGCTGTACCTACGCT +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISACAGV*WSCTYA
Trigger: AGCGTAGGTACAGCTCCACCAGACACCAGCACATGC...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAGACGCTGTATGCTGCTaGCCATGTTCCACTCCAGGG +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPDAVCC*PCSTPG
Trigger: CCCTGGAGTGGAACATGGCCAGCAGCATACAGCGTC...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAAAGCAGCCAGGGCTGTTaGAGTTACAAGTGGTTCACA +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQSSQGC*SYKWFT
Trigger: TGTGAACCACTTGTAACTCCAACAGCCCTGGCTGCT...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTCTGAAAGTTCTGCATTaGCTGATCAACTATCCCAGC +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGLKVLH*LINYPS
Trigger: GCTGGGATAGTTGATCAGCCAATGCAGAACTTTCAG...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAAGTTGGCACCGTTGTTTaGGAAGCTGAGAAAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQVGTVV*EAEKVQ
Trigger: CTGGACTTTCTCAGCTTCCCAAACAACGGTGCCAAC...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ACCAAGGACTTGTTTTCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACATCCAAGGCCATGTaGACTTCTGGTCTACCCAAA +
Preference number: 4 (lower is better)
Translates to: TKDLFSRTSAVVGMCAQQTSKAM*TSGLPK
Trigger: TTTGGGTAGACCAGAAGTCCACATGGCCTTGGATGT...CTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGAAAACAAGTCCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
3UTR CAA 72 bp TGTGCTCAGCAGACTGAGGTTGTAGGTCAGTGTCCTTaGAAATCAGTGGCCCTGTCTTACTGCCACATTTCA +
Preference number: 4 (lower is better)
Translates to: CAQQTEVVGQCP*KSVALSYCHIS
Trigger: TGAAATGTGGCAGTAAGACAGGGCCACTGATTTCAAAGGACACTGACCTACAACCTCAGTCTGCTGAGCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGATCTCTACCTTACACTTaGCTTTGGTGTACACATCCT +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRSLPYT*LWCTHP
Trigger: AGGATGTGTACACCAAAGTCAAGTGTAAGGTAGAGA...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAATCTTCCTTTGCTGCCTaGTTCACTGCAACAGTTGAC +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQSSFAA*FTATVD
Trigger: GTCAACTGTTGCAGTGAATCAGGCAGCAAAGGAAGA...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGACAATTGACGACTGGTaGGAGGGCCGGGCAATGCGG +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMTIDDW*EGRAMR
Trigger: CCGCATTGCCCGGCCCTCTCACCAGTCGTCAATTGT...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTAACACACATGGCTTATaGGGGTGCGGGACAGTTTCC +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISNTHGL*GCGTVS
Trigger: GGAAACTGTCCCGCACCCTCATAAGCCATGTGTGTT...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGGATTCTCCACAGATCTaGGGACACCAGTTTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LSGLKSLSALRLESLTHPDSPQI*GHQFLL
Trigger: CAGAAGAAACTGGTGTCCTCAGATCTGTGGAGAATC...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCCGCCAGCTGTACTGGTaGCTGTGGAGACTCGCCAAA +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLRQLYW*LWRLAK
Trigger: TTTGGCGAGTCTCCACAGTCACCAGTACAGCTGGCG...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTATTGGGCTATCCCACTaGCTCAGCTGCTCATTCCTG +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISIGLSH*LSCSFL
Trigger: CAGGAATGAGCAGCTGAGTCAGTGGGATAGCCCAAT...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGAGTCTTATCTTCAATCTaGATGACTTGTATGCCGTGC +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRVLSSI*MTCMPC
Trigger: GCACGGCATACAAGTCATTCAGATTGAAGATAAGAC...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCATAGCCAAAGCCAGTaGGGAATACAACCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: LSGLKSLSALRLESLTHPHSQSQ*GIQPVF
Trigger: GAACACAGGTTGTATTCCTCACTGGCTTTGGCTATG...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAAACAGCTGTGCATGGTaGCCAGACATCCTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPNSCAW*PDILLG
Trigger: TCCCAGCAGGATGTCTGGTCACCATGCACAGCTGTT...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGGCACCTGCTGCCCTGTaGACAGCTGTGCATGGTGAC +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMAPAAL*TAVHGD
Trigger: GTCACCATGCACAGCTGTTCACAGGGCAGCAGGTGC...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCACCAAACCTCTGTATaGCAGCTATGTCAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: LSGLKSLSALRLESLTHPHQTSV*QLCQCV
Trigger: CACACACTGACATAGCTGGCATACAGAGGTTTGGTG...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAGACAACAAATGAATaGCTTCCATCGGGTCCCACA +
Preference number: 4 (lower is better)
Translates to: LSGLKSLSALRLESLTHPQTTNE*LPSGPT
Trigger: TGTGGGACCCGATGGAAGGCATTCATTTGTTGTCTG...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCATGTCAGCAGATGGGCTaGATGTGCTGGTGTCTGGTG +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPCQQMG*MCWCLV
Trigger: CACCAGACACCAGCACATGCAGCCCATCTGCTGACA...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTGATGACGCTGTATGCTaGTGGCCATGTTCCACTCCA +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISDDAVC*WPCSTP
Trigger: TGGAGTGGAACATGGCCAGCAGCATACAGCGTCATC...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp ACCAAGGACTTGTTTTCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGGAAAATGATGGCAGGTaGTCCAGTTATTCGCACAGA +
Preference number: 4 (lower is better)
Translates to: TKDLFSRTSAVVGMCAQQENDGR*SSYSHR
Trigger: TCTGTGCGAATAACTGGAGCACCTGCCATCATTTTC...CTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGAAAACAAGTCCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAAGTACATACTGAAAGATaGCTGTCCGCAGGTCATCTG +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQVHTER*LSAGHL
Trigger: CAGATGACCTGCGGACAGGCATCTTTCAGTATGTAC...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAGGTGACCAGACATCCTaGTGGGAGGAAGGTAGGTGT +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPGDQTS*WEEGRC
Trigger: ACACCTACCTTCCTCCCAGCAGGATGTCTGGTCACC...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCACCAATGCCTTGGCGTaGTGTGTCACCTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLTNALA*CVTCTG
Trigger: GCCTGTGCAGGTGACACAGCACGCCAAGGCATTGGT...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAAGCAAGCACCCTTCATaGTCTTGGCCTGAACCCCTC +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPSKHPS*SWPEPL
Trigger: GAGGGGTTCAGGCCAAGAGCATGAAGGGTGCTTGCT...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTTTCCTTTCAGACACATaGCTCTGCAACCTACAAATC +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGFLSDT*LCNLQI
Trigger: GATTTGTAGGTTGCAGAGCCATGTGTCTGAAAGGAA...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGATGTCACCTGGGGCTTTaGCACAAATTTTTATGGATC +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRCHLGL*HKFLWI
Trigger: GATCCATAAAAATTTGTGCCAAAGCCCCAGGTGACA...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTTCCTATGTCAGCAGATaGGCTGCATGTGCTGGTGTC +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISSYVSR*AACAGV
Trigger: GACACCAGCACATGCAGCCCATCTGCTGACATAGGA...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTAATCCATGGATATTTTaGGTATGGACTGTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGNPWIF*VWTVVA
Trigger: GGCCACAACAGTCCATACCCAAAATATCCATGGATT...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGAGCCATCTTTCCACTTTaGAGATGTCAGATTATGGAC +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRAIFPL*RCQIMD
Trigger: GTCCATAATCTGACATCTCCAAAGTGGAAAGATGGC...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCATGCTTCTCACTAAGCTaGCGGGGCTGCCGAGGATTT +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPCFSLS*RGCRGF
Trigger: AAATCCTCGGCAGCCCCGCCAGCTTAGTGAGAAGCA...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGGCTCACGAAGGCTCCTaGGCCTCGGGTCAATCCCTC +
Preference number: 4 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVAHEGS*ASGQSL
Trigger: GAGGGATTGACCCGAGGCCCAGGAGCCTTCGTGAGC...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCACACCCTTCATGCTCTTaGCCTGAACCCCTCACCAGA +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPHPSCS*PEPLTR
Trigger: TCTGGTGAGGGGTTCAGGCCAAGAGCATGAAGGGTG...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAATGTGTCTCCTTATGGTaGGCTGCATCCAAGATAAAC +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQCVSLW*AASKIN
Trigger: GTTTATCTTGGATGCAGCTCACCATAAGGAGACACA...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCGGCCTTCACAGGAACTaGCACTGGTCTGGACTCTGT +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSAGLHRN*HWSGLC
Trigger: ACAGAGTCCAGACCAGTGTCAGTTCCTGTGAAGGCC...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAAGCGGATTATCAGCCTaGGGAGCCATGGCAATAGAG +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPSGLSA*GAMAIE
Trigger: CTCTATTGCCATGGCTCCTCAGGCTGATAATCCGCT...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGACCTGAAGATACCCATTaGATAATTCATGCAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRPEDTH*IIHAEE
Trigger: CTCTTCTGCATGAATTATTCAATGGGTATCTTCAGG...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGACTTCTGTTTGGCTGTaGGGCAATCAAAGTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LSGLKSLSALRLESLTHPTSVWL*GNQSVL
Trigger: GAGAACACTTTGATTGCCTCACAGCCAAACAGAAGT...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ACCAAGGACTTGTTTTCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGATATGGTTTCCAGATTaGCAGTTTGACTCGCATTGG +
Preference number: 4 (lower is better)
Translates to: TKDLFSRTSAVVGMCAQQIWFPD*QFDSHW
Trigger: CCAATGCGAGTCAAACTGTCAATCTGGAAACCATAT...CTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGAAAACAAGTCCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAGGTTCACTGGCTGGATaGGCAGCTTCCGTAACTTCA +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPGSLAG*AASVTS
Trigger: TGAAGTTACGGAAGCTGCTCATCCAGCCAGTGAACC...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCGGCCTTATGTCCTGCTaGAGCCTGGGTCTCAGATGT +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLGLMSC*SLGLRC
Trigger: ACATCTGAGACCCAGGCTTCAGCAGGACATAAGGCC...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGCTTAAACTGTTGCTCTaGCAGCCTCTCCCGGGCACC +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMLKLLL*QPLPGT
Trigger: GGTGCCCGGGAGAGGCTGTCAGAGCAACAGTTTAAG...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTATCCAAGATAAACTCTaGACGGGTACCATTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGIQDKL*TGTIVF
Trigger: GAAAACAATGGTACCCGTGCAGAGTTTATCTTGGAT...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAACTCCTTATGGTGAGCTaGATCCAAGATAAACTCTGC +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQLLMVS*IQDKLC
Trigger: GCAGAGTTTATCTTGGATGCAGCTCACCATAAGGAG...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGACAGCTACCACAGGCTaGTGTTGTGCATGTCTATTT +
Preference number: 4 (lower is better)
Translates to: LSGLKSLSALRLESLTHPTATTG*CCACLF
Trigger: AAATAGACATGCACAACAGCAGCCTGTGGTAGCTGT...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCCACTGTCACTGCCAATaGCACTGTCCTGAGCACCAC +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLHCHCQ*HCPEHH
Trigger: GTGGTGCTCAGGACAGTGGCATTGGCAGTGACAGTG...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTGTGGGATCCCACTTTTaGTGTCTGTTTCTCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISVGSHF*CLFLQA
Trigger: TGCCTGGAGAAACAGACAGCAAAAGTGGGATCCCAC...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAATCAGGTTCGACATTTTaGAGTGGATTTTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQSGSTF*SGFSCP
Trigger: AGGGCAGGAAAATCCACTGCAAAATGTCGAACCTGA...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGATTCAGCATCAACAAATaGTTCTTCATCCAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRFSINK*FFIQCH
Trigger: GTGACACTGGATGAAGAAGCATTTGTTGATGCTGAA...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCGAGGTCGTCAGACACTaGCAGGCTCAACTGGGTGAT +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLEVVRH*QAQLGD
Trigger: ATCACCCAGTTGAGCCTGGCAGTGTCTGACGACCTC...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGACAGGCAGCACCTGCTaGCCTGTGAACAGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMTGSTC*PVNSCA
Trigger: TGCACAGCTGTTCACAGGGCAGCAGGTGCTGCCTGT...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGTGCACAGGCAGCACCTaGTGCCCTGTGAACAGCTGT +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMCTGST*CPVNSC
Trigger: ACAGCTGTTCACAGGGCAGCAGGTGCTGCCTGTGCA...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTGAGGCTACTCTTGGTTaGTTGAGCTGCACAGTGAGT +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISEATLG*LSCTVS
Trigger: ACTCACTGTGCAGCTCAAGCAACCAAGAGTAGCCTC...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCACTGCTGCTTTCCCAATaGGGCACTTCCAATGGACAG +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPLLLSQ*GTSNGQ
Trigger: CTGTCCATTGGAAGTGCCCCATTGGGAAAGCAGCAG...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGAATGCTGGTTTGTCCATaGTACCAACTTCTTACTGTT +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRMLVCP*YQLLTV
Trigger: AACAGTAAGAAGTTGGTACCATGGACAAACCAGCAT...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGACTCTCTTTGGGTCTTTaGGAGTTTAGTGTGAAATAC +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRLSLGL*EFSVKY
Trigger: GTATTTCACACTAAACTCCCAAAGACCCAAAGAGAG...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTTGGGACACAATCAAATaGAGAAACAGGTCTAGTTCT +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGWDTIK*RNRSSS
Trigger: AGAACTAGACCTGTTTCTCCATTTGATTGTGTCCCA...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTGGACTGTTGTGGCCCTaGATTGCCACTGTGTTTACA +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISGLLWP*IATVFT
Trigger: TGTAAACACAGTGGCAATCCAGGGCCACAACAGTCC...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAGGATGGGACGAACCATaGGGTAAAACACGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPGWDEP*GKTRVH
Trigger: GTGGACTCGTGTTTTACCCCATGGTTCGTCCCATCC...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ACCAAGGACTTGTTTTCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGTTCCTGCCCTCTTCCTaGAATAATCTGTGTTTCACT +
Preference number: 4 (lower is better)
Translates to: TKDLFSRTSAVVGMCAQQFLPSS*NNLCFT
Trigger: AGTGAAACACAGATTATTCCAGGAAGAGGGCAGGAA...CTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGAAAACAAGTCCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTAACGACTCGAGGACTTaGGTCTTCGGAGAGGGTTAT +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISNDSRT*VFGEGY
Trigger: ATAACCCTCTCCGAAGACCCAAGTCCTCGAGTCGTT...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAATTCTCAGAAACAGGCTaGGAAGTAAGTCCTTGGTCT +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQFSETG*EVSPWS
Trigger: AGACCAAGGACTTACTTCCCAGCCTGTTTCTGAGAA...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCAAGGAGAGAGGGGTGTaGTCGGAGGCTATGTACAGC +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLKERGV*SEAMYS
Trigger: GCTGTACATAGCCTCCGACCACACCCCTCTCTCCTT...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGTTAACTCGAGTTTGCTaGGAACCACGTCCCCACCCC +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMLTRVC*EPRPHP
Trigger: GGGGTGGGGACGTGGTTCTCAGCAAACTCGAGTTAA...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTCCTACAAATCCAATCTaGCAATCAAAGAAAGGTTCT +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGPTNPI*QSKKGS
Trigger: AGAACCTTTCTTTGATTGTCAGATTGGATTTGTAGG...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTTTCAACATTCTGGATTaGGCCCTCAAGAGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISFNILD*ALKSWQ
Trigger: CTGCCAACTCTTGAGGGCTCAATCCAGAATGTTGAA...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCATCCCAGAGGCACATTTaGCCAATGATGTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPSQRHI*PMMCCS
Trigger: ACTGCAGCACATCATTGGTCAAATGTGCCTCTGGGA...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCTCCTTCAAAATGTCCTaGCTGCCAACCTTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSASFKMS*LPTFPR
Trigger: CCTGGGGAAGGTTGGCAGTCAGGACATTTTGAAGGA...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ACCAAGGACTTGTTTTCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGTGCTTTCAAAGGCTTTaGTACATCCAAGTAGATGTC +
Preference number: 4 (lower is better)
Translates to: TKDLFSRTSAVVGMCAQQCFQRL*YIQVDV
Trigger: GACATCTACTTGGATGTATCAAAGCCTTTGAAAGCA...CTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGAAAACAAGTCCTTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTCTTTGGAAATGTGCTTaGCGAATGATGTGGTCCCTC +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISLWKCA*RMMWSL
Trigger: GAGGGACCACATCATTCGTCAAGCACATTTCCAAAG...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGTCCTTTCCCCACGCCTaGGATGACACCTTTGGCCTT +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMSFPHA*DDTFGL
Trigger: AAGGCCAAAGGTGTCATCTCAGGCGTGGGGAAAGGA...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCACGTTGTTTGGGAAGCTaGGAAAGTCCAGCTCCATGT +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPRCLGS*ESPAPC
Trigger: ACATGGAGCTGGACTTTCTCAGCTTCCCAAACAACG...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGTCAGACACATGGCTCTaGAACCTACAAATCCAATCT +
Preference number: 4 (lower is better)
Translates to: LSGLKSLSALRLESLTHPSDTWL*NLQIQS
Trigger: AGATTGGATTTGTAGGTTGCAGAGCCATGTGTCTGA...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGACCAACTCTGATATATTaGTTGCAACAAAAGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LTPEGSGDARSCIKALPRPTLIY*LQQKCL
Trigger: CAGACACTTTTGTTGCAAGCAATATATCAGAGTTGG...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAATATGGTCCAAGGAAATaGATCACCCTCTTCAAGGAT +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQYGPRK*ITLFKD
Trigger: ATCCTTGAAGAGGGTGATGCATTTCCTTGGACCATA...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTCTGTACTGCTCTATTTaGACAATGCGGATTTTAACA +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGLYCSI*TMRILT
Trigger: TGTTAAAATCCGCATTGTGCAAATAGAGCAGTACAG...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTGATTTAAGAAAGTCCTaGCTGTTTTCCCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGDLRKS*LFSHLL
Trigger: AAGAAGATGGGAAAACAGGCAGGACTTTCTTAAATC...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCGGACCACTGTTCCACTaGCGAAGATGCAGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLGPLFH*RRCRFG
Trigger: ACCAAACCTGCATCTTCGGCAGTGGAACAGTGGTCC...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCGCCATCACTGGAAAGTaGCATCTGTCCACAGATGCC +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLAITGK*HLSTDA
Trigger: GGCATCTGTGGACAGATGGCACTTTCCAGTGATGGC...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTTTGCTTGGTGTCCTGTaGACAGCTGATCTCTGTGAT +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISLLGVL*TADLCD
Trigger: ATCACAGAGATCAGCTGTGCACAGGACACCAAGCAA...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTCTCTCTACCAAGGTATaGATTTTAATAACAGATGGC +
Preference number: 4 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGLSTKV*ILITDG
Trigger: GCCATCTGTTATTAAAATCCATACCTTGGTAGAGAG...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTGTCTTGTTGACTTGTTaGACCTTTGCCACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISVLLTC*TFATAV
Trigger: CACAGCAGTGGCAAAGGTCCAACAAGTCAACAAGAC...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTTGGCAGATGACCTTGTaGATGCATGGAGGCTTTCAA +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISWQMTL*MHGGFQ
Trigger: TTGAAAGCCTCCATGCATCCACAAGGTCATCTGCCA...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAACTGGAGATGGCATTTaGGGTGCTGATTCGGGTACT +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPTGDGI*GADSGT
Trigger: AGTACCCGAATCAGCACCCCAAATGCCATCTCCAGT...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCTCATCAGTATCCACCTaGCCAAACCGCAGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLSSVST*PNRSVS
Trigger: GGAGACACTGCGGTTTGGCCAGGTGGATACTGATGA...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTCAGACATATTTGACGTaGCTGTTTGGAGCCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISQTYLT*LFGAWS
Trigger: TGACCAGGCTCCAAACAGCCACGTCAAATATGTCTG...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGGACCTGAGCAAAATGTaGGTCCACCAAATAATGGTA +
Preference number: 4 (lower is better)
Translates to: LSGLKSLSALRLESLTHPDLSKM*VHQIMV
Trigger: TACCATTATTTGGTGGACCCACATTTTGCTCAGGTC...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCACTTTCTGTTGATGCATaGTTGATGCAGGGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPLSVDA*LMQGQS
Trigger: GGACTGACCCTGCATCAATCATGCATCAACAGAAAG...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAAAGATTATCAGAAGGTTaGTTAAGGCTGCTGACTACA +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQRLSEG*LRLLTT
Trigger: TGTAGTCAGCAGCCTTAATCAACCTTCTGATAATCT...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAATTACTGTTGAAGAGCTaGCATTTCCAATATGAGACC +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQLLLKS*HFQYET
Trigger: GGTCTCATATTGGAAATGTCAGCTCTTCAACAGTAA...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCGTGTCAGAAGGACCCTaGAGCAAAGGGATCAACTTC +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLVSEGP*SKGINF
Trigger: GAAGTTGATCCCTTTGCTTCAGGGTCCTTCTGACAC...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGCCAATGCCACTGTCCTaGGCACCACTGTATCGGGAA +
Preference number: 4 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVPMPLS*APLYRE
Trigger: TTCCCGATACAGTGGTGCTCAGGACAGTGGCATTGG...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACCACAGTGAAGGGCTCTaGCCAACGCCAGTTACCCCA +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHHSEGL*PTPVTP
Trigger: TGGGGTAACTGGCGTTGGTCAGAGCCCTTCACTGTG...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGCAGACACACATCTCTTaGCCAGTCCTCGTCTCCCTT +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMQTHIS*PVLVSL
Trigger: AAGGGAGACGAGGACTGGTCAAGAGATGTGTGTCTG...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGAGATCCCACTTGGACTaGTTGATAAGCAGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMRSHLD*LISRAQ
Trigger: CTGGGCCCTGCTTATCAATCAGTCCAAGTGGGATCT...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCCAAGTGTCCCTGGTATaGTGGTTTGTCCATGGTACC +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLQVSLV*WFVHGT
Trigger: GGTACCATGGACAAACCAGCATACCAGGGACACTTG...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCGTGCTATTGCCCTGGTaGAGAATCCATTTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLVLLPW*RIHFPS
Trigger: GGAGGGAAAATGGATTCTGCACCAGGGCAATAGCAC...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTATGTACTGGGGGACCTaGATGGTAAAGGCTATCAAA +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISMYWGT*MVKAIK
Trigger: TTTGATAGCCTTTACCATCCAGGTCCCCCAGTACAT...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGGTTCCACTCCAGGGCTaGGTTTTGAGAGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMVPLQG*VLRVPL
Trigger: GAGAGGAACTCTCAAAACCCAGCCCTGGAGTGGAAC...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGAGTCCACTATCACGGTaGAGTCCAGCAGCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMSPLSR*SPAASA
Trigger: TGCAGAAGCTGCTGGACTCCACCGTGATAGTGGACT...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGTTACAGATCACAAAGTaGCTGAAGACCAACTCTTCT +
Preference number: 4 (lower is better)
Translates to: LSGLKSLSALRLESLTHPLQITK*LKTNSS
Trigger: AGAAGAGTTGGTCTTCAGCCACTTTGTGATCTGTAA...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCCAGTTTGACTCGCATTaGGCTATCCCACTGACTCAG +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSAQFDSH*AIPLTQ
Trigger: CTGAGTCAGTGGGATAGCCCAATGCGAGTCAAACTG...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAACTGGGCATCTGTTGTaGAAAACGACTCGAGGACTT +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPTGHLL*KTTRGL
Trigger: AAGTCCTCGAGTCGTTTTCCACAACAGATGCCCAGT...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCGGCCATGTGGACTTCTaGTCTACCCAAAGACTGAAG +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSAGHVDF*STQRLK
Trigger: CTTCAGTCTTTGGGTAGACCAGAAGTCCACATGGCC...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGGCAGGAGCAGCCTGCTaGATTCTTCGGGGTTTTATG +
Preference number: 4 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVAGAAC*ILRGFM
Trigger: CATAAAACCCCGAAGAATTCAGCAGGCTGCTCCTGC...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCGGCACATTTGACCAATaGTGTGCTGCAGTACTTCAG +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLGTFDQ*CAAVLQ
Trigger: CTGAAGTACTGCAGCACATCATTGGTCAAATGTGCC...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAAGACTCTAAGTCAACATaGAGACAGACAACAAATGAA +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQDSKST*RQTTNE
Trigger: TTCATTTGTTGTCTGTCTTCATGTTGACTTAGAGTC...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGTTTGGGAGTTTAGTGTaGAATACACTTGCAATTGCA +
Preference number: 4 (lower is better)
Translates to: LSGLKSLSALRLESLTHPFGSLV*NTLAIA
Trigger: TGCAATTGCAAGTGTATTTCACACTAAACTCCCAAA...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCGGTAAATATCTTTCCTaGGGACAGATCTGCCAAGCG +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLGKYLS*GQICQA
Trigger: CGCTTGGCAGATCTGTCCTCAGGAAAGATATTTACC...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGTCCAGGGCTGGGTTTTaGGAGTTCCTCTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVSRAGF*EFLSLS
Trigger: AGAGAGTGAGAGGAACTCTCAAAACCCAGCCCTGGA...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCCTCTGTTTCCTGTGGTaGCAACTCAGAAGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSALCFLW*QLRSKE
Trigger: TTCCTTGCTTCTGAGTTGTCACCACAGGAAACAGAG...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCTCCAAATGTTTTCTTaGAATGATGTCTTCTGTGCT +
Preference number: 4 (lower is better)
Translates to: LSGLKSLSALRLESLTHPLQMFS*NDVFCA
Trigger: AGCACAGAAGACATCATTTCAAGAAAACATTTGGAG...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACCCAGGTCTGCTGTGCTaGTATCTGGATCCTCTGTGG +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHPGLLC*YLDPLW
Trigger: CCACAGAGGATCCAGATATCAGCACAGCAGACCTGG...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAACATTTTTATCAGAAATaGATGGCTGTAGGTACTGTG +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQHFYQK*MAVGTV
Trigger: CACAGTACCTACAGCCATTCATTTCTGATAAAAATG...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAAGATCACAAAGTGGCTaGAGACCAACTCTTCTACCT +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPRSQSG*RPTLLP
Trigger: AGGTAGAAGAGTTGGTCTTCAGCCACTTTGTGATCT...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGAGCAGTATCTGTTTCTaGAGCGTGGCTGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVSSICF*SVAVSS
Trigger: GCTGGACACAGCCACGCTTCAGAAACAGATACTGCT...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCACGTCTAATCAGACTCTaGACATATCCTGGTGGTAAG +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPRLIRL*TYPGGK
Trigger: CTTACCACCAGGATATGTGCAGAGTCTGATTAGACG...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTCAGCACCAGATCAGTTaGAGAAATATCCATGAATGC +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISQHQIS*RNIHEC
Trigger: GCATTCATGGATATTTCTGCAACTGATCTGGTGCTG...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGATCTTCAAAACCCGATaGACCGCACTGCTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMIFKTR*TALLSR
Trigger: TCTGGACAGCAGTGCGGTGCATCGGGTTTTGAAGAT...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCATGTGTCTTCCTTTGCTaGCTGATTCACTGCAACAGT +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPCVFLC*LIHCNS
Trigger: ACTGTTGCAGTGAATCAGGCAGCAAAGGAAGACACA...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAACCATTGAATAATTCATaGAGAAGAGCCAAGCAATTC +
Preference number: 4 (lower is better)
Translates to: SGLKSLSALRLESLTHPQPLNNS*RRAKQF
Trigger: GAATTGCTTGGCTCTTCTGCATGAATTATTCAATGG...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCACAAGTGGTTCACAAGTaGTTTGAGAACCGGATTCAC +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPQVVHK*FENRIH
Trigger: GTGAATCCGGTTCTCAAAGCACTTGTGAACCACTTG...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCTTCCACTGCCGAAGATaGAGGTTTGGTTCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLFHCRR*RFGSLK
Trigger: CTTCAGAGAACCAAACCTGCATCTTCGGCAGTGGAA...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGGCACCATGGAGGAGATaGAGAACTGACACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMAPWRR*RTDTAS
Trigger: AGAAGCTGTGTCAGTTCTGCATCTCCTCCATGGTGC...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAAGCCTACAGAAACAATaGGATCCTTCAGCGTTTGAG +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPSLQKQ*DPSAFE
Trigger: CTCAAACGCTGAAGGATCCCATTGTTTCTGTAGGCT...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCAAAGGCCGAAGTGACTaGAAGTTTGTGGCATTCGTG +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSAKGRSD*KFVAFV
Trigger: CACGAATGCCACAAACTTCCAGTCACTTCGGCCTTT...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCAGGCTGCTGACTACATaGACCAACTGTTCAGCATAC +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLRLLTT*TNCSAY
Trigger: GTATGCTGAACAGTTGGTCCATGTAGTCAGCAGCCT...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCTTGAGTCTTTTCCACTaGAGATGGCATTTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSALSLFH*RWHLGC
Trigger: GCACCCCAAATGCCATCTCCAGTGGAAAAGACTCAA...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCCTCCTGGGACTTTTCTaGCCCATAGAACTCATCAAG +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLLLGLF*PIELIK
Trigger: CTTGATGAGTTCTATGGGCCAGAAAAGTCCCAGGAG...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCTGGGAAGTAAGTCCTTaGTCTTGCAGTCTGGGTAAC +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLWEVSP*SCSLGN
Trigger: GTTACCCAGACTGCAAGACCAAGGACTTACTTCCCA...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACCGTTCACCAATGCCTTaGCGTGCTGTGTCACCTGCA +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHRSPMP*RAVSPA
Trigger: TGCAGGTGACACAGCACGCCAAGGCATTGGTGAACG...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGTGCCTTTCTCTGGTTTaGGTTGATCCCACTGAGCAG +
Preference number: 4 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVCLSLV*VDPTEQ
Trigger: CTGCTCAGTGGGATCAACTCAAACCAGAGAAAGGCA...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCTCTGTTCTGGTAATTTaGATTTGGGTAAGGCCACCG +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLSVLVI*IWVRPP
Trigger: CGGTGGCCTTACCCAAATTCAAATTACCAGAACAGA...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAGTGAACTTTGGTCTTTaGCAACTTTCCACGGTAACA +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPVNFGL*QLSTVT
Trigger: TGTTACCGTGGAAAGTTGTCAAAGACCAAAGTTCAC...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACCCTAGTTGGTCCAGGTaGTGGCAAAGACGGAATTCC +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHPSWSR*WQRRNS
Trigger: GGAATTCCGTCTTTGCCATCACCTGGACCAACTAGG...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGTCCAGATTGACAGTTTaGCTCGCATTGGGCTATCCC +
Preference number: 4 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVSRLTV*LALGYP
Trigger: GGGATAGCCCAATGCGAGTCAAACTGTCAATCTGGA...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACTCAAAATGTCCTGACTaGCAACCTTCCCCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHSKCPD*QPSPGL
Trigger: CAGGCCTGGGGAAGGTTGGCAGTCAGGACATTTTGA...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCGGTCTCTTTGCTATGTaGAGAGCTGTGTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSAGLFAM*RAVCLF
Trigger: AAAAAGGCACACAGCTCTGCACATAGCAAAGAGACC...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGCACATCACCCAGGTCTaGTGTGCTGATATCTGGATC +
Preference number: 4 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVHITQV*CADIWI
Trigger: GATCCAGATATCAGCACAGCAGACCTGGGTGATGTG...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCGGTTTCACCACAGTTTaGATCGTGACGTTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLGFTTV*IVTFLH
Trigger: ATGCAGAAACGTCACGATGCAAACTGTGGTGAAACC...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCCTCTTGATATGTCAGTaGTATTGCCCTGGTGCAGAA +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSALLICQ*YCPGAE
Trigger: TTCTGCACCAGGGCAATAGCACTGACATATCAAGAG...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGATTCTTCCAAGGCTTTaGTGGAGACCAGGAGACTCT +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMILPRL*WRPGDS
Trigger: AGAGTCTCCTGGTCTCCAGCAAAGCCTTGGAAGAAT...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACAGCCTCTTAAACTGTTaGTCTGACAGCCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHSLLNC*SDSLSR
Trigger: CCGGGAGAGGCTGTCAGAGCAACAGTTTAAGAGGCT...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTGGTACCATTGTTTTCTaGACTCCGGTAATCAAACAA +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISGTIVF*TPVIKQ
Trigger: TTGTTTGATTACCGGAGTCCAGAAAACAATGGTACC...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGCAGGACAAGTGTCCCTaGTATGCTGGTTTGTCCATG +
Preference number: 4 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVQDKCP*YAGLSM
Trigger: CATGGACAAACCAGCATACCAGGGACACTTGTCCTG...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTAATGATGCAAGCTTATaGTCCAAGGAAATGCATCAC +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISNDASL*SKEMHH
Trigger: GTGATGCATTTCCTTGGACCATAAGCTTGCATCATT...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGGCGTATGGGTCCTCATaGGCTGACCTGAAGATTTTC +
Preference number: 4 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVAYGSS*ADLKIF
Trigger: GAAAATCTTCAGGTCAGCCCATGAGGACCCATACGC...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGGCCACTGCCTTTCTCTaGTTTGAGTTGATCCCACTG +
Preference number: 4 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVATAFL*FELIPL
Trigger: CAGTGGGATCAACTCAAACCAGAGAAAGGCAGTGGC...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCCCACAACATCATCCCTaGGCTCTCTTCTGTTTCATT +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSAPQHHP*ALFCFI
Trigger: AATGAAACAGAAGAGAGCCCAGGGATGATGTTGTGG...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCCTTGGTCTTGCAGTCTaGGTAACTGATAATCTGGTG +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLLGLAV*VTDNLV
Trigger: CACCAGATTATCAGTTACCCAGACTGCAAGACCAAG...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCTCTGTTCTCTCTCCTTaGCAGACCAAGACAGCAAAA +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLSVLSP*QTKTAK
Trigger: TTTTGCTGTCTTGGTCTGCCAAGGAGAGAGAACAGA...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCTGGCTGTTTGGAGCCTaGTCAGCATATAGATGTGTT +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLWLFGA*SAYRCV
Trigger: AACACATCTATATGCTGACCAGGCTCCAAACAGCCA...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGATCAGAGGCTACTCTTaGTTGCTTGAGCTGCACAGT +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMIRGYS*LLELHS
Trigger: ACTGTGCAGCTCAAGCAACCAAGAGTAGCCTCTGAT...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAGGTTCCATGTACTTGTaGCCAGCACTAATAATCTTT +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPGSMYL*PALIIF
Trigger: AAAGATTATTAGTGCTGGTCACAAGTACATGGAACC...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACCTCTGTAGCCTTGGTTaGTGGCTCCAATCCAGTCAT +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHLCSLG*WLQSSH
Trigger: ATGACTGGATTGGAGCCATCAACCAAGGCTACAGAG...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCATCAGACTTTCCCTCCTaGAGATACCCATTGAATAAT +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPSDFPS*RYPLNN
Trigger: ATTATTCAATGGGTATCTTCAGGAGGGAAAGTCTGA...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCATGTCCGCAGGTCATCTaGACTTTGTTCAGTTTTAAA +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPCPQVI*TLFSFK
Trigger: TTTAAAACTGAACAAAGTTCAGATGACCTGCGGACA...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCGGTCTACCCAAAGACTaGAGCATTTTCCAGACATAT +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLGLPKD*SIFQTY
Trigger: ATATGTCTGGAAAATGCTTCAGTCTTTGGGTAGACC...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTAAAGTAACACTTGTATaGCGAGTAGGGATATATTCC +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISKVTLV*RVGIYS
Trigger: GGAATATATCCCTACTCGGCATACAAGTGTTACTTT...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGCACAGGCTGCTGTTGTaGATGTCTATTTGCTCGTTT +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMHRLLL*MSICSF
Trigger: AAACGAGCAAATAGACATGCACAACAGCAGCCTGTG...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCCCCCATAGTGAAAGCTaGAGATCTGAAGGTTTTAAG +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSAPHSES*RSEGFK
Trigger: CTTAAAACCTTCAGATCTCCAGCTTTCACTATGGGG...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAGCCCAATTTTGTCCATaGTACATGAATTCTCAGTTC +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPAQFCP*YMNSQF
Trigger: GAACTGAGAATTCATGTACCATGGACAAAATTGGGC...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCAACATAGGTAGCTGCTaGTCTGTGATAGAAAGCTTC +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLNIGSC*SVIESF
Trigger: GAAGCTTTCTATCACAGACCAGCAGCTACCTATGTT...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTTTGGTAGACTTTTCTTaGACTATTCCCAAATCCTCA +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISLVDFS*TIPKSS
Trigger: TGAGGATTTGGGAATAGTCCAAGAAAAGTCTACCAA...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTTTTCACACCTGTCATTaGGAAGACTTCATTCATCAA +
Preference number: 4 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISFHTCH*EDFIHQ
Trigger: TTGATGAATGAAGTCTTCCCAATGACAGGTGTGAAA...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCTTTTCCACTGTCACCTaGGGCTTTGGCACAAATTTT +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSAFSTVT*GFGTNF
Trigger: AAAATTTGTGCCAAAGCCCCAGGTGACAGTGGAAAA...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCATGTTGGAGTTACAAGTaGTTCACAAGTGCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPCWSYK*FTSALR
Trigger: TCTCAAAGCACTTGTGAACCACTTGTAACTCCAACA...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCATTTGTCCATGGTACATaGATTCTCAGTTCATGGATA +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPFVHGT*ILSSWI
Trigger: TATCCATGAACTGAGAATTCATGTACCATGGACAAA...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCATCCTCATTTTTCCCTaGAGGAAAGTCTTGTTGACT +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLILIFP*RKVLLT
Trigger: AGTCAACAAGACTTTCCTTCAGGGAAAAATGAGGAT...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACAAGACAGACAACAAATaGATGCCTTCCATCGGGTCC +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHKTDNK*MPSIGS
Trigger: GGACCCGATGGAAGGCATTCATTTGTTGTCTGTCTT...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGTGGACAGAAACTTTTTaGAAGCAGGAGATGGCTCTC +
Preference number: 4 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVWTETF*KQEMAL
Trigger: GAGAGCCATCTCCTGCTTTCAAAAAGTTTCTGTCCA...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACGGTTCACAAGTGCTTTaGGAACCGGATTCACTTGCA +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHGSQVL*EPDSLA
Trigger: TGCAAGTGAATCCGGTTCTCAAAGCACTTGTGAACC...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGTATCTTCAATCTGAATaGCTTGTATGCCGTGCTGCA +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMYLQSE*LVCRAA
Trigger: TGCAGCACGGCATACAAGTCATTCAGATTGAAGATA...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCATAAACATAGGTAGCTaGTGGTCTGTGATAGAAAGC +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSAINIGS*WSVIES
Trigger: GCTTTCTATCACAGACCAGCAGCTACCTATGTTTAT...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCACAACAAAAGTGTCTGTaGTCTTGTAGCTTGAATTGT +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPQQKCL*SCSLNC
Trigger: ACAATTCAAGCTACAAGAGCACAGACACTTTTGTTG...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCCTGAGGAAAAAGAAGTaGTACTGCTTAAGGGATCTT +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLLRKKK*YCLRDL
Trigger: AAGATCCCTTAAGCAGTAGCACTTCTTTTTCCTCAG...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGGCCAGGTACTTTTTGTaGTGCTTTGACAGTAAGGCT +
Preference number: 4 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVARYFL*CFDSKA
Trigger: AGCCTTACTGTCAAAGCAGCACAAAAAGTACCTGGC...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGGTGACAAGATGTTTTTaGAATGTAGTCCACGAGCCT +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMVTRCF*NVVHEP
Trigger: AGGCTCGTGGACTACATTGCAAAAACATCTTGTCAC...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCTGTGAATATAACTCTTaGCCTTTGTATGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSACEYNS*PLYGAG
Trigger: TCCTGCTCCATACAAAGGCCAAGAGTTATATTCACA...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGAGACACAATTGTACTTaGGGAAGGCAGGTTGTCATT +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMRHNCT*GRQVVI
Trigger: AATGACAACCTGCCTTCCCCAAGTACAATTGTGTCT...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCGACAGTAGCAGAAAATaGTCCTATAAGAATCCGACT +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSADSSRK*SYKNPT
Trigger: AGTCGGATTCTTATAGGACCATTTTCTGCTACTGTC...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCACACCTCTTAAATCCATaGATATTTTGGGTATGGACT +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPHLLNP*IFWVWT
Trigger: AGTCCATACCCAAAATATCCATGGATTTAAGAGGTG...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGTGCTGTGCTGATATCTaGATCCTCTGTGGTGTTGAA +
Preference number: 4 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVCCADI*ILCGVE
Trigger: TTCAACACCACAGAGGATCCAGATATCAGCACAGCA...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGCCGAAGATGCAGGTTTaGTTCTCTGAAGGAAATGAT +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMPKMQV*FSEGND
Trigger: ATCATTTCCTTCAGAGAACCAAACCTGCATCTTCGG...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGTTTGAAGTAGGCACCTaGATGACAGTGCTATACTCA +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMFEVGT*MTVLYS
Trigger: TGAGTATAGCACTGTCATCCAGGTGCCTACTTCAAA...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGTGCTGTGGTGAACACTaGTCCTCTTTCAAACACAGA +
Preference number: 4 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVCCGEH*SSFKHR
Trigger: TCTGTGTTTGAAAGAGGACCAGTGTTCACCACAGCA...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
3UTR CAA 72 bp GATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTaGTTTTCCAGGACTAGTGCTGTAGTAGGGATGTGT +
Preference number: 4 (lower is better)
Translates to: DLHIWFELFTKD*FSRTSAVVGMC
Trigger: ACACATCCCTACTACAGCACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCAATTTTCACCACAAATaGAGAAGCAGGCTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSANFHHK*RSRLQF
Trigger: AAACTGAAGCCTGCTTCTTCATTTGTGGTGAAAATT...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCAGATTGCCTCTCTTCTaGATTTTACTCCAGACTTTA +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSARLPLF*ILLQTL
Trigger: TAAAGTCTGGAGTAAAATTCAGAAGAGAGGCAATCT...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACTTTTCCAGACATATTTaGCGTGGCTGTTTGGAGCCT +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHFSRHI*RGCLEP
Trigger: AGGCTCCAAACAGCCACGTCAAATATGTCTGGAAAA...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCTATGGAGCAGGATACTaGATATCTATTCTACTTTCC +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSAYGAGY*ISILLS
Trigger: GGAAAGTAGAATAGATATGCAGTATCCTGCTCCATA...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCGGTTTTTCTTTGCACTaGAGAAACACTCCTTCAAAA +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLGFSLH*RNTPSK
Trigger: TTTTGAAGGAGTGTTTCTGCAGTGCAAAGAAAAACC...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACCCGATATTGATGGACTaGAGGTCTATCTGGTACTGT +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHPILMD*RSIWYC
Trigger: ACAGTACCAGATAGACCTGCAGTCCATCAATATCGG...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAATTGCTAATGTCTTGTaGACAGTGTTTGTATTTTCC +
Preference number: 4 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPIANVL*TVFVFS
Trigger: GGAAAATACAAACACTGTGCACAAGACATTAGCAAT...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGTTCAGTTCAACATTCTaGATTGAGCCCTCAAGAGTT +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMFSSTF*IEPSRV
Trigger: AACTCTTGAGGGCTCAATCCAGAATGTTGAACTGAA...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACTGGCACAAATTTTTATaGATCCCAAGGTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHWHKFL*IPRSQR
Trigger: CCTCTGGGACCTTGGGATCCATAAAAATTTGTGCCA...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCAAAAATCTGTCAAGATaGGTGTCAAAATTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LYQINSTEQLSGLKSLSAKNLSR*VSKLLS
Trigger: GGAGAGCAATTTTGACACCCATCTTGACAGATTTTT...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGGCAACAAAAACCTTCTaGAGTTCATCCCAATATTCC +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMATKTF*SSSQYS
Trigger: GGAATATTGGGATGAACTCCAGAAGGTTTTTGTTGC...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGGACACCAGTTTCTTCTaGTCATGTACAAGGTTGATA +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMDTSFF*SCTRLI
Trigger: TATCAACCTTGTACATGACCAGAAGAAACTGGTGTC...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
3UTR CAA 72 bp ACCAATTGCAGAGATGATCTTCATATTTGGTTTGAATaGTTCACCAAGGACTTGTTTTCCAGGACTAGTGCT +
Preference number: 4 (lower is better)
Translates to: TNCRDDLHIWFE*FTKDLFSRTSA
Trigger: AGCACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGATCATCTCTGCAATTGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGGTATATATGCTGAAATaGTGCAAGCTTATGGTCCAA +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMVYMLK*CKLMVQ
Trigger: TTGGACCATAAGCTTGCATCATTTCAGCATATATAC...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACAATAATGGAACTGTTTaGAGTAGGCACCTGGATGAC +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHNNGTV*SRHLDD
Trigger: GTCATCCAGGTGCCTACTTCAAACAGTTCCATTATT...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACATGGGGTCTGGAAGATaGCTTCTCATGATAAAGAGA +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHMGSGR*LLMIKR
Trigger: TCTCTTTATCATGAGAAGTCATCTTCCAGACCCCAT...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR GCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCTTGATATCTGGCAACTaGAATTCACAAACTTTGCTT +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLLISGN*NSQTLL
Trigger: AAGCAAAGTTTGTGAATTGCAGTTGCCAGATATCAA...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACGAACCACAGCTTTCATaGTCATCCTGTATTCCATCT +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHEPQLS*SSCIPS
Trigger: AGATGGAATACAGGATGACCATGAAAGCTGTGGTTC...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGTACAAGGTTGATATCTaGCAACTGCAATTCACAAAC +
Preference number: 4 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMYKVDI*QLQFTN
Trigger: GTTTGTGAATTGCAGTTGCCAGATATCAACCTTGTA...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCGGAGATGTCAGATTATaGACCAGTTTAATTGCTAAT +
Preference number: 4 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLGDVRL*TSLIAN
Trigger: ATTAGCAATTAAACTGGTCCATAATCTGACATCTCC...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACTTGCAGAAATATCCATaGATGCACGATCCCATAACT +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHLQKYP*MHDPIT
Trigger: AGTTATGGGATCGTGCATTCATGGATATTTCTGCAA...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACGACAGACTGAATTCTTaGAACGCAACAAAAACCTTC +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHDRLNS*NATKTF
Trigger: GAAGGTTTTTGTTGCGTTTCAAGAATTCAGTCTGTC...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR TCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACTGCTTTCAGACAGACTaGATTCTTGAAACGCAACAA +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHCFQTD*ILETQQ
Trigger: TTGTTGCGTTTCAAGAATTCAGTCTGTCTGAAAGCA...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACTTGAATTGTGAGATTTaGGAGCTCAAAAATACCCTC +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHLNCEI*ELKNTL
Trigger: GAGGGTATTTTTGAGCTCCCAAATCTCACAATTCAA...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACTTTGAAAGCAGGAGATaGCTCTCCAAATGTTTTCTT +
Preference number: 4 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHFESRR*LSKCFL
Trigger: AAGAAAACATTTGGAGAGCCATCTCCTGCTTTCAAA...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CCA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGTATAATAATGGGGTCTaGAAGATGACTTCTCATGAT +
Preference number: 4 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVYNNGV*KMTSHD
Trigger: ATCATGAGAAGTCATCTTCCAGACCCCATTATTATA...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
3UTR CAA 72 bp ATCCGCAAACAAACTTATAACCAATATGTTCTGTTCTaGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTA +
Preference number: 4 (lower is better)
Translates to: IRKQTYNQYVLF*SVDTKCYFSLV
Trigger: TACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATATTGGTTATAAGTTTGTTTGCGGAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp TCTGAAGCGTGGCTGTGTCCAGCTCTGACGACCCCACAGCAGGCGTaGCGTCCCAGCAAGGCAGGGAGCTGGATCTCACGGCAGGATGCT +
Preference number: 5 (lower is better)
Translates to: SEAWLCPALTTPQQA*RPSKAGSWISRQDA
Trigger: AGCATCCTGCCGTGAGATCCAGCTCCCTGCCTTGCTGGGACGTCACGCCTGCTGTGGGGTCGTCAGAGCTGGACACAGCCACGCTTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp CCTTGGCGTGCTGTGTCACCTGCACAGGCAGCACCTGCTGCCCTGTaGACAGCTGTGCATGGTGACCAGACATCCTGCTGGGAGGAAGGT +
Preference number: 5 (lower is better)
Translates to: PWRAVSPAQAAPAAL*TAVHGDQTSCWEEG
Trigger: ACCTTCCTCCCAGCAGGATGTCTGGTCACCATGCACAGCTGTTCACAGGGCAGCAGGTGCTGCCTGTGCAGGTGACACAGCACGCCAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp AAACCCCAGCAGTATCTGTTTCTGAAGCGTGGCTGTGTCCAGCTCTaGCGACCCCACAGCAGGCGTGACGTCCCAGCAAGGCAGGGAGCT +
Preference number: 5 (lower is better)
Translates to: KPQQYLFLKRGCVQL*RPHSRRDVPARQGA
Trigger: AGCTCCCTGCCTTGCTGGGACGTCACGCCTGCTGTGGGGTCGTCAGAGCTGGACACAGCCACGCTTCAGAAACAGATACTGCTGGGGTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp GGCGTGACGTCCCAGCAAGGCAGGGAGCTGGATCTCACGGCAGGATaGTCGCCCCCTGGACAAATGCTGAAAGTAGCACTGTCTGGAACA +
Preference number: 5 (lower is better)
Translates to: GVTSQQGRELDLTAG*SPPGQMLKVALSGT
Trigger: TGTTCCAGACAGTGCTACTTTCAGCATTTGTCCAGGGGGCGAGCATCCTGCCGTGAGATCCAGCTCCCTGCCTTGCTGGGACGTCACGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp GGGCACTGCTACACTCTGTCTGGGAAACTCTCCTCCAATGATGGCTaGCAGGCTCCAGCACTGAGCGCTGTCGGCTCCTGGTACAGGAGA +
Preference number: 5 (lower is better)
Translates to: GHCYTLSGKLSSNDG*QAPALSAVGSWYRR
Trigger: TCTCCTGTACCAGGAGCCGACAGCGCTCAGTGCTGGAGCCTGCCAGCCATCATTGGAGGAGAGTTTCCCAGACAGAGTGTAGCAGTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp CCAGCCTGCTCTGAAAAGAGCCCCAGCAGCATAGTGCATGGCCAGTaGGTGCACCAGCTGCCTTGCTGTGGTGAACACTGGTCCTCTTTC +
Preference number: 5 (lower is better)
Translates to: PACSEKSPSSIVHGQ*VHQLPCCGEHWSSF
Trigger: GAAAGAGGACCAGTGTTCACCACAGCAAGGCAGCTGGTGCACGCACTGGCCATGCACTATGCTGCTGGGGCTCTTTTCAGAGCAGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp GAGAGAGGGGTGTGGTCGGAGGCTATGTACAGCTTCAGGGAGGCATaGATGCTGATGAGCAGGTTCACTGGCTGGATGAGCAGCTTCCGT +
Preference number: 5 (lower is better)
Translates to: ERGVWSEAMYSFREA*MLMSRFTGWMSSFR
Trigger: ACGGAAGCTGCTCATCCAGCCAGTGAACCTGCTCATCAGCATCCATGCCTCCCTGAAGCTGTACATAGCCTCCGACCACACCCCTCTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp GTGCATGGCCAGTGCGTGCACCAGCTGCCTTGCTGTGGTGAACACTaGTCCTCTTTCAAACACAGAGAAGGAGAGAGGGGTGTGGTCGGA +
Preference number: 5 (lower is better)
Translates to: VHGQCVHQLPCCGEH*SSFKHREGERGVVG
Trigger: TCCGACCACACCCCTCTCTCCTTCTCTGTGTTTGAAAGAGGACCAGTGTTCACCACAGCAAGGCAGCTGGTGCACGCACTGGCCATGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp AGCCCCAGCAGCATAGTGCATGGCCAGTGCGTGCACCAGCTGCCTTaGTGTGGTGAACACTGGTCCTCTTTCAAACACAGAGAAGGAGAG +
Preference number: 5 (lower is better)
Translates to: SPSSIVHGQCVHQLP*CGEHWSSFKHREGE
Trigger: CTCTCCTTCTCTGTGTTTGAAAGAGGACCAGTGTTCACCACAGCAAGGCAGCTGGTGCACGCACTGGCCATGCACTATGCTGCTGGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp CAGATGAGCGAACTGGAAGGACATGCACAGGGATGGGACGAACCATaGGGTAAAACACGAGTCCACTCTGGTGCAAGCAGCCAGGGCTGT +
Preference number: 5 (lower is better)
Translates to: QMSELEGHAQGWDEP*GKTRVHSGASSQGC
Trigger: ACAGCCCTGGCTGCTTGCACCAGAGTGGACTCGTGTTTTACCCCATGGTTCGTCCCATCCCTGTGCATGTCCTTCCAGTTCGCTCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp CCAGCAAGGCAGGGAGCTGGATCTCACGGCAGGATGCTCGCCCCCTaGACAAATGCTGAAAGTAGCACTGTCTGGAACATGACAATGCTC +
Preference number: 5 (lower is better)
Translates to: PARQGAGSHGRMLAP*TNAESSTVWNMTML
Trigger: GAGCATTGTCATGTTCCAGACAGTGCTACTTTCAGCATTTGTCCAGGGGGCGAGCATCCTGCCGTGAGATCCAGCTCCCTGCCTTGCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp CAGCATAGTGCATGGCCAGTGCGTGCACCAGCTGCCTTGCTGTGGTaGACACTGGTCCTCTTTCAAACACAGAGAAGGAGAGAGGGGTGT +
Preference number: 5 (lower is better)
Translates to: QHSAWPVRAPAALLW*TLVLFQTQRRREGC
Trigger: ACACCCCTCTCTCCTTCTCTGTGTTTGAAAGAGGACCAGTGTTCACCACAGCAAGGCAGCTGGTGCACGCACTGGCCATGCACTATGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp AGGTCTGGAGCAAAGAGCTTCACAGTAGCTTTGGGGAGCACCCACTaGATCCACAGACTAACACGGCCGCTGGACCCACCAATGTTACTG +
Preference number: 5 (lower is better)
Translates to: RSGAKSFTVALGSTH*IHRLTRPLDPPMLL
Trigger: CAGTAACATTGGTGGGTCCAGCGGCCGTGTTAGTCTGTGGATGCAGTGGGTGCTCCCCAAAGCTACTGTGAAGCTCTTTGCTCCAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp AGGAAAACATTGTCCAGGGTGAGCCTTAGCAGTTCCGATGGTGCCTaGTGTGTGAGGTCGTCAGACACTGCCAGGCTCAACTGGGTGATG +
Preference number: 5 (lower is better)
Translates to: RKTLSRVSLSSSDGA*CVRSSDTARLNWVM
Trigger: CATCACCCAGTTGAGCCTGGCAGTGTCTGACGACCTCACACACCAGGCACCATCGGAACTGCTAAGGCTCACCCTGGACAATGTTTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp TCACGAAGGCTCCTGGGCCTCGGGTCAATCCCTCATATGGAAGCCTaGAGAAGTCCGAGATCCCATTCCCAATGCTTCTCACTAAGCTGG +
Preference number: 5 (lower is better)
Translates to: SRRLLGLGSIPHMEA*RSPRSHSQCFSLSW
Trigger: CCAGCTTAGTGAGAAGCATTGGGAATGGGATCTCGGACTTCTTCAGGCTTCCATATGAGGGATTGACCCGAGGCCCAGGAGCCTTCGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp AGAAACAGGTCTAGTTCTAAGTCACCGGTTCCTCTTCGGCCAGGCTaGCGAACAACAGTGACTCCGAGGGCTTGTCTGGCAGATGACCTT +
Preference number: 5 (lower is better)
Translates to: RNRSSSKSPVPLRPG*RTTVTPRACLADDL
Trigger: AAGGTCATCTGCCAGACAAGCCCTCGGAGTCACTGTTGTTCGGCAGCCTGGCCGAAGAGGAACCGGTGACTTAGAACTAGACCTGTTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp GGCTGGGTTTTGAGAGTTCCTCTCACTCTCTGTTGGCACTCCTCCTaGGCCACTGCCTTTCTCTGGTTTGAGTTGATCCCACTGAGCAGT +
Preference number: 5 (lower is better)
Translates to: GWVLRVPLTLCWHSS*ATAFLWFELIPLSS
Trigger: ACTGCTCAGTGGGATCAACTCAAACCAGAGAAAGGCAGTGGCTCAGGAGGAGTGCCAACAGAGAGTGAGAGGAACTCTCAAAACCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp TCCAAGGCTTTGCTGGAGACCAGGAGACTCTGCACCCTGGAATACTaGGCAGGGTCTGTTCTCTCTCCTTGGCAGACCAAGACAGCAAAA +
Preference number: 5 (lower is better)
Translates to: SKALLETRRLCTLEY*AGSVLSPWQTKTAK
Trigger: TTTTGCTGTCTTGGTCTGCCAAGGAGAGAGAACAGACCCTGCTCAGTATTCCAGGGTGCAGAGTCTCCTGGTCTCCAGCAAAGCCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp TTGACAAGCACAGAGTCCACTATCACGGTGGAGTCCAGCAGCTTCTaGACGCCATCACTGGAAAGTGCCATCTGTCCACAGATGCCAAAG +
Preference number: 5 (lower is better)
Translates to: LTSTESTITVESSSF*TPSLESAICPQMPK
Trigger: CTTTGGCATCTGTGGACAGATGGCACTTTCCAGTGATGGCGTGCAGAAGCTGCTGGACTCCACCGTGATAGTGGACTCTGTGCTTGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp AGTAGTAGTTCCTATGTCAGCAGATGGGCTGCATGTGCTGGTGTCTaGTGGAGCTGTACCTACGCTGCTCCAAACTGGAGAACCAGGGAT +
Preference number: 5 (lower is better)
Translates to: SSSSYVSRWAACAGV*WSCTYAAPNWRTRD
Trigger: ATCCCTGGTTCTCCAGTTTGGAGCAGCGTAGGTACAGCTCCACCAGACACCAGCACATGCAGCCCATCTGCTGACATAGGAACTACTACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp AGCTTGAACCGAATCTCCCTCAGTAGTAGTTCCTATGTCAGCAGATaGGCTGCATGTGCTGGTGTCTGGTGGAGCTGTACCTACGCTGCT +
Preference number: 5 (lower is better)
Translates to: SLNRISLSSSSYVSR*AACAGVWWSCTYAA
Trigger: AGCAGCGTAGGTACAGCTCCACCAGACACCAGCACATGCAGCCCATCTGCTGACATAGGAACTACTACTGAGGGAGATTCGGTTCAAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp ACAAGGGACCTGCAGCACATCACCCAGGTCTGCTGTGCTGATATCTaGATCCTCTGTGGTGTTGAAAGGCACAGGCGTGATTCGTACAAG +
Preference number: 5 (lower is better)
Translates to: TRDLQHITQVCCADI*ILCGVERHRRDSYK
Trigger: CTTGTACGAATCACGCCTGTGCCTTTCAACACCACAGAGGATCCAGATATCAGCACAGCAGACCTGGGTGATGTGCTGCAGGTCCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp AAGACGGAATTCCAGATGAGCGAACTGGAAGGACATGCACAGGGATaGGACGAACCATGGGGTAAAACACGAGTCCACTCTGGTGCAAGC +
Preference number: 5 (lower is better)
Translates to: KTEFQMSELEGHAQG*DEPWGKTRVHSGAS
Trigger: GCTTGCACCAGAGTGGACTCGTGTTTTACCCCATGGTTCGTCCCATCCCTGTGCATGTCCTTCCAGTTCGCTCATCTGGAATTCCGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp TACAGCTTCAGGGAGGCATGGATGCTGATGAGCAGGTTCACTGGCTaGATGAGCAGCTTCCGTAACTTCACTGCGTTCACCAATGCCTTG +
Preference number: 5 (lower is better)
Translates to: YSFREAWMLMSRFTG*MSSFRNFTAFTNAL
Trigger: CAAGGCATTGGTGAACGCAGTGAAGTTACGGAAGCTGCTCATCCAGCCAGTGAACCTGCTCATCAGCATCCATGCCTCCCTGAAGCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp GTGAACACTGGTCCTCTTTCAAACACAGAGAAGGAGAGAGGGGTGTaGTCGGAGGCTATGTACAGCTTCAGGGAGGCATGGATGCTGATG +
Preference number: 5 (lower is better)
Translates to: VNTGPLSNTEKERGV*SEAMYSFREAWMLM
Trigger: CATCAGCATCCATGCCTCCCTGAAGCTGTACATAGCCTCCGACCACACCCCTCTCTCCTTCTCTGTGTTTGAAAGAGGACCAGTGTTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGACTCCAGGGCTGGGTTTaGAGAGTTCCTCTCACTCTC +
Preference number: 5 (lower is better)
Translates to: LTPEGSGDARSCIKALPRLQGWV*RVPLTL
Trigger: GAGAGTGAGAGGAACTCTCAAAACCCAGCCCTGGAG...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTGGGGTGGAGGTCTCTTaGCTATGTGCAGAGCTGTGT +
Preference number: 5 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGGVEVS*LCAELC
Trigger: ACACAGCTCTGCACATAGCAAAGAGACCTCCACCCC...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAAGCGTTCACCAATGCCTaGGCGTGCTGTGTCACCTGC +
Preference number: 5 (lower is better)
Translates to: SGLKSLSALRLESLTHPQAFTNA*ACCVTC
Trigger: GCAGGTGACACAGCACGCCAAGGCATTGGTGAACGC...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp GACAGTGCTATACTCAGAGGCTTTGGGTTCCAGACACACATCTCTTaGCCAGTCCTCGTCTCCCTTAGCCTTCACACACAGCTCTGTCAG +
Preference number: 5 (lower is better)
Translates to: DSAILRGFGFQTHIS*PVLVSLSLHTQLCQ
Trigger: CTGACAGAGCTGTGTGTGAAGGCTAAGGGAGACGAGGACTGGTCAAGAGATGTGTGTCTGGAACCCAAAGCCTCTGAGTATAGCACTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp CCAATATTCCAAACCACAAGGGACCTGCAGCACATCACCCAGGTCTaGTGTGCTGATATCTGGATCCTCTGTGGTGTTGAAAGGCACAGG +
Preference number: 5 (lower is better)
Translates to: PIFQTTRDLQHITQV*CADIWILCGVERHR
Trigger: CCTGTGCCTTTCAACACCACAGAGGATCCAGATATCAGCACAGCAGACCTGGGTGATGTGCTGCAGGTCCCTTGTGGTTTGGAATATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp TATCACGGTGGAGTCCAGCAGCTTCTGCACGCCATCACTGGAAAGTaGCATCTGTCCACAGATGCCAAAGGGTTTCACCACAGTTTGCAT +
Preference number: 5 (lower is better)
Translates to: YHGGVQQLLHAITGK*HLSTDAKGFHHSLH
Trigger: ATGCAAACTGTGGTGAAACCCTTTGGCATCTGTGGACAGATGGCACTTTCCAGTGATGGCGTGCAGAAGCTGCTGGACTCCACCGTGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp GAGCATCGGTACTGGGCATCTGTTGTGGAAAACGACTCGAGGACTTaGGTCTTCGGAGAGGGTTATGTAAGTGACTCCCAAGTGCTCTTG +
Preference number: 5 (lower is better)
Translates to: EHRYWASVVENDSRT*VFGEGYVSDSQVLL
Trigger: CAAGAGCACTTGGGAGTCACTTACATAACCCTCTCCGAAGACCCAAGTCCTCGAGTCGTTTTCCACAACAGATGCCCAGTACCGATGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp TGTATTCTTCCAAGGCTTTGCTGGAGACCAGGAGACTCTGCACCCTaGAATACTGAGCAGGGTCTGTTCTCTCTCCTTGGCAGACCAAGA +
Preference number: 5 (lower is better)
Translates to: CILPRLCWRPGDSAP*NTEQGLFSLLGRPR
Trigger: TCTTGGTCTGCCAAGGAGAGAGAACAGACCCTGCTCAGTATTCCAGGGTGCAGAGTCTCCTGGTCTCCAGCAAAGCCTTGGAAGAATACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp ACAAAGAGTACTTCTGATGTCAGCAGCAAGCACCCTTCATGCTCTTaGCCTGAACCCCTCACCAGAACCACATCCAAGGCCATGTGGACT +
Preference number: 5 (lower is better)
Translates to: TKSTSDVSSKHPSCS*PEPLTRTTSKAMWT
Trigger: AGTCCACATGGCCTTGGATGTGGTTCTGGTGAGGGGTTCAGGCCAAGAGCATGAAGGGTGCTTGCTGCTGACATCAGAAGTACTCTTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGAGCTACTCTTGGTTGCTaGAGCTGCACAGTGAGTAGG +
Preference number: 5 (lower is better)
Translates to: LTPEGSGDARSCIKALPRATLGC*SCTVSR
Trigger: CCTACTCACTGTGCAGCTCAAGCAACCAAGAGTAGC...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp TGCACAATGCGGATTTTAACACTGTCACTGCCAATGCCACTGTCCTaGGCACCACTGTATCGGGAAGAGGTTTCAGCTGTGCCTCCATCA +
Preference number: 5 (lower is better)
Translates to: CTMRILTLSLPMPLS*APLYREEVSAVPPS
Trigger: TGATGGAGGCACAGCTGAAACCTCTTCCCGATACAGTGGTGCTCAGGACAGTGGCATTGGCAGTGACAGTGTTAAAATCCGCATTGTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp GGAAAACGACTCGAGGACTTGGGTCTTCGGAGAGGGTTATGTAAGTaGCTCCCAAGTGCTCTTGATATGTCAGTGCTATTGCCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: GKRLEDLGLRRGLCK*LPSALDMSVLLPWC
Trigger: GCACCAGGGCAATAGCACTGACATATCAAGAGCACTTGGGAGTCACTTACATAACCCTCTCCGAAGACCCAAGTCCTCGAGTCGTTTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp GCACCATCAATCTCCACATCAGAGGCTACTCTTGGTTGCTTGAGCTaGACAGTGAGTAGGTTGTTTTGCTTGGTGTCCTGTGCACAGCTG +
Preference number: 5 (lower is better)
Translates to: APSISTSEATLGCLS*TVSRLFCLVSCAQL
Trigger: CAGCTGTGCACAGGACACCAAGCAAAACAACCTACTCACTGTGCAGCTCAAGCAACCAAGAGTAGCCTCTGATGTGGAGATTGATGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp CGAGTCCACTCTGGTGCAAGCAGCCAGGGCTGTTGGAGTTACAAGTaGTTCACAAGTGCTTTGAGAACCGGATTCACTTGCAGAACTTTG +
Preference number: 5 (lower is better)
Translates to: RVHSGASSQGCWSYK*FTSALRTGFTCRTL
Trigger: CAAAGTTCTGCAAGTGAATCCGGTTCTCAAAGCACTTGTGAACCACTTGTAACTCCAACAGCCCTGGCTGCTTGCACCAGAGTGGACTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp TGGGGTAAAACACGAGTCCACTCTGGTGCAAGCAGCCAGGGCTGTTaGAGTTACAAGTGGTTCACAAGTGCTTTGAGAACCGGATTCACT +
Preference number: 5 (lower is better)
Translates to: WGKTRVHSGASSQGC*SYKWFTSALRTGFT
Trigger: AGTGAATCCGGTTCTCAAAGCACTTGTGAACCACTTGTAACTCCAACAGCCCTGGCTGCTTGCACCAGAGTGGACTCGTGTTTTACCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp GGCAGGATGCTCGCCCCCTGGACAAATGCTGAAAGTAGCACTGTCTaGAACATGACAATGCTCCTTTCCAGAATAGGAGTTAGAGATGGC +
Preference number: 5 (lower is better)
Translates to: GRMLAPWTNAESSTV*NMTMLLSRIGVRDG
Trigger: GCCATCTCTAACTCCTATTCTGGAAAGGAGCATTGTCATGTTCCAGACAGTGCTACTTTCAGCATTTGTCCAGGGGGCGAGCATCCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGAGGGTTTCACCACAGTTaGCATCGTGACGTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: LTPEGSGDARSCIKALPRGFHHS*HRDVSA
Trigger: TGCAGAAACGTCACGATGCAAACTGTGGTGAAACCC...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTCCTGAGATGACACCTTaGGCCTTATGTCCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGPEMTP*ALCPAE
Trigger: TTCAGCAGGACATAAGGCCAAAGGTGTCATCTCAGG...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTAGTAGGTTGTTTTGCTaGGTGTCCTGTGCACAGCTG +
Preference number: 5 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGSRLFC*VSCAQL
Trigger: CAGCTGTGCACAGGACACCAAGCAAAACAACCTACT...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp GCCTCCAGGCTGTATCTTAGTGGCTATTTGCTTAATGAGGGCTGTTaGTATGGGAACCGCACAATCGGAAGGGTCATATTCTTCCCGTGC +
Preference number: 5 (lower is better)
Translates to: ASRLYLSGYLLNEGC*YGNRTIGRVIFFPC
Trigger: GCACGGGAAGAATATGACCCTTCCGATTGTGCGGTTCCCATATCAACAGCCCTCATTAAGCAAATAGCCACTAAGATACAGCCTGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp TACCTTACACTTGACTTTGGTGTACACATCCTGCACGTCTATGGATaGACTGAGGTCTTCCAGTTCACTGACCATGCAGACCTCTGTGCC +
Preference number: 5 (lower is better)
Translates to: YLTLDFGVHILHVYG*TEVFQFTDHADLCA
Trigger: GGCACAGAGGTCTGCATGGTCAGTGAACTGGAAGACCTCAGTGCATCCATAGACGTGCAGGATGTGTACACCAAAGTCAAGTGTAAGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp AGATGGGTGTCAAAATTGCTCTCCTTTCTTGATGACGCTGTATGCTaGTGGCCATGTTCCACTCCAGGGCTGGGTTTTGAGAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: RWVSKLLSFLDDAVC*WPCSTPGLGFESSS
Trigger: AGAGGAACTCTCAAAACCCAGCCCTGGAGTGGAACATGGCCAGCAGCATACAGCGTCATCAAGAAAGGAGAGCAATTTTGACACCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp TCAAGATGGGTGTCAAAATTGCTCTCCTTTCTTGATGACGCTGTATaGTGCTGGCCATGTTCCACTCCAGGGCTGGGTTTTGAGAGTTCC +
Preference number: 5 (lower is better)
Translates to: SRWVSKLLSFLDDAV*CWPCSTPGLGFESS
Trigger: GGAACTCTCAAAACCCAGCCCTGGAGTGGAACATGGCCAGCAGCATACAGCGTCATCAAGAAAGGAGAGCAATTTTGACACCCATCTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp TGGTGCAAGCAGCCAGGGCTGTTGGAGTTACAAGTGGTTCACAAGTaGTTTGAGAACCGGATTCACTTGCAGAACTTTGGTCATCTGTCG +
Preference number: 5 (lower is better)
Translates to: WCKQPGLLELQVVHK*FENRIHLQNFGHLS
Trigger: CGACAGATGACCAAAGTTCTGCAAGTGAATCCGGTTCTCAAAGCACTTGTGAACCACTTGTAACTCCAACAGCCCTGGCTGCTTGCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp CTCCTGGCAGACAGGACCACTGTTCCACTGCCGAAGATGCAGGTTTaGTTCTCTGAAGGAAATGATCATGTATTCCAGTTCAGATGGCAC +
Preference number: 5 (lower is better)
Translates to: LLADRTTVPLPKMQV*FSEGNDHVFQFRWH
Trigger: GTGCCATCTGAACTGGAATACATGATCATTTCCTTCAGAGAACCAAACCTGCATCTTCGGCAGTGGAACAGTGGTCCTGTCTGCCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGAAACTTTAACTCGAGTTaGCTGAGAACCACGTCCCCA +
Preference number: 5 (lower is better)
Translates to: LTPEGSGDARSCIKALPRNFNSS*LRTTSP
Trigger: TGGGGACGTGGTTCTCAGCAAACTCGAGTTAAAGTT...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGATCAGCAGTGCTACGGTaGGTAGAATTAGAACCACAG +
Preference number: 5 (lower is better)
Translates to: LTPEGSGDARSCIKALPRSAVLR*VELEPQ
Trigger: CTGTGGTTCTAATTCTACCAACCGTAGCACTGCTGA...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ACCAAGGACTTGTTTTCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGTGTCACCAGACACAATaGTACTTGGGGAAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: TKDLFSRTSAVVGMCAQQCHQTQ*YLGKAG
Trigger: ACCTGCCTTCCCCAAGTACAATTGTGTCTGGTGACA...CTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGAAAACAAGTCCTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTTGGTTCACAAGTGCTTaGAGAACCGGATTCACTTGC +
Preference number: 5 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGWFTSA*RTGFTC
Trigger: GCAAGTGAATCCGGTTCTCAAAGCACTTGTGAACCA...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGAAGCAGCCAGGGCTGTaGGAGTTACAAGTGGTTCAC +
Preference number: 5 (lower is better)
Translates to: LSGLKSLSALRLESLTHPKQPGL*ELQVVH
Trigger: GTGAACCACTTGTAACTCCAACAGCCCTGGCTGCTT...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTGAAGGCAACTTCTGTTaGGCTGTGAGGCAATCAAAG +
Preference number: 5 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGEGNFC*AVRQSK
Trigger: CTTTGATTGCCTCACAGCCAAACAGAAGTTGCCTTC...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTCCTTTGGAAATGTGCTaGACGAATGATGTGGTCCCT +
Preference number: 5 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGPLEMC*TNDVVP
Trigger: AGGGACCACATCATTCGTCAAGCACATTTCCAAAGG...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGGCTCCCCCAATGGGTTaGGTGAATACCCCCATGATT +
Preference number: 5 (lower is better)
Translates to: LSGLKSLSALRLESLTHPAPPMG*VNTPMI
Trigger: AATCATGGGGGTATTCACCAAACCCATTGGGGGAGC...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp GTCACTGTTTTTGTCTTGATTGGGCTGCTGGCATATTCTGAGGCCTaGTATGACTGCTGCTTTCCCAATGGGGCACTTCCAATGGACAGT +
Preference number: 5 (lower is better)
Translates to: VTVFVLIGLLAYSEA*YDCCFPNGALPMDS
Trigger: ACTGTCCATTGGAAGTGCCCCATTGGGAAAGCAGCAGTCATATCAGGCCTCAGAATATGCCAGCAGCCCAATCAAGACAAAAACAGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp ACAACAAATGAATGCCTTCCATCGGGTCCCACAGGAAGCAGCTTTTaGGATGTGACTGCTAGAGTAGAGGTACATCCCATAGGCTCCACA +
Preference number: 5 (lower is better)
Translates to: TTNECLPSGPTGSSF*DVTARVEVHPIGST
Trigger: TGTGGAGCCTATGGGATGTACCTCTACTCTAGCAGTCACATCTCAAAAGCTGCTTCCTGTGGGACCCGATGGAAGGCATTCATTTGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp AACTGGAGAACCAGGGATAGGCCCTGCCACTGTCTCTGGGTAGACTaGAGATGGACTAAGATTGCCTCTCTTCTGAATTTTACTCCAGAC +
Preference number: 5 (lower is better)
Translates to: NWRTRDRPCHCLWVD*RWTKIASLLNFTPD
Trigger: GTCTGGAGTAAAATTCAGAAGAGAGGCAATCTTAGTCCATCTTCAGTCTACCCAGAGACAGTGGCAGGGCCTATCCCTGGTTCTCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp AGGCTTCCATTGAGGTTTGACAGTGATGCTAACACACATGGCTTATaGGGGTGCGGGACAGTTTCCATGGAGACCACGATTTGGGTAGTA +
Preference number: 5 (lower is better)
Translates to: RLPLRFDSDANTHGL*GCGTVSMETTIWVV
Trigger: TACTACCCAAATCGTGGTCTCCATGGAAACTGTCCCGCACCCTCATAAGCCATGTGTGTTAGCATCACTGTCAAACCTCAATGGAAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp CAAACCGCAGTGTCTCCTGTGTGTCATTACAGATCACAAAGTGGCTaGAGACCAACTCTTCTACCTCAGGGCATTTGTTCTGTTGCCACG +
Preference number: 5 (lower is better)
Translates to: QTAVSPVCHYRSQSG*RPTLLPQGICSVAT
Trigger: CGTGGCAACAGAACAAATGCCCTGAGGTAGAAGAGTTGGTCTTCAGCCACTTTGTGATCTGTAATGACACACAGGAGACACTGCGGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp TGCGGCAAACACAGGACAAGTGTCCCTGGTATGCTGGTTTGTCCATaGTACCAACTTCTTACTGTTCCAGGGATGTCACCAGACACAATT +
Preference number: 5 (lower is better)
Translates to: CGKHRTSVPGMLVCP*YQLLTVPGMSPDTI
Trigger: AATTGTGTCTGGTGACATCCCTGGAACAGTAAGAAGTTGGTACCATGGACAAACCAGCATACCAGGGACACTTGTCCTGTGTTTGCCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp TTGGAGCCTGGTCAGCATATAGATGTGTTGGTTGGCACCGTTGTTTaGGAAGCTGAGAAAGTCCAGCTCCATGTAAAATACCGTAGCCAG +
Preference number: 5 (lower is better)
Translates to: LEPGQHIDVLVGTVV*EAEKVQLHVKYRSQ
Trigger: CTGGCTACGGTATTTTACATGGAGCTGGACTTTCTCAGCTTCCCAAACAACGGTGCCAACCAACACATCTATATGCTGACCAGGCTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTAACTCCTGAAGGTAGTGGTGATGCCAGGTCATGCATCAAAGCCCTCCCTAGAGGAAGAAGTCCAGGTTaGTGGTTATGTTCACTTCCA +
Preference number: 5 (lower is better)
Translates to: LTPEGSGDARSCIKALPRGRSPG*WLCSLP
Trigger: TGGAAGTGAACATAACCACAAACCTGGACTTCTTCC...TCTAGGGAGGGCTTTGATGCATGACCTGGCATCACCACTACCTTCAGGAGTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTGGTGGGATCCCACTTTaGCTGTCTGTTTCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISGGIPL*LSVSPG
Trigger: GCCTGGAGAAACAGACAGCAAAAGTGGGATCCCACC...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTTTCAATCTGAATGACTaGTATGCCGTGCTGCACCAT +
Preference number: 5 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGFNLND*YAVLHH
Trigger: ATGGTGCAGCACGGCATACAAGTCATTCAGATTGAA...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ACCAAGGACTTGTTTTCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGGACTCCCAAGTGCTCTaGATATGTCAGTGCTATTGC +
Preference number: 5 (lower is better)
Translates to: TKDLFSRTSAVVGMCAQQDSQVL*ICQCYC
Trigger: GCAATAGCACTGACATATCAAGAGCACTTGGGAGTC...CTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGAAAACAAGTCCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGTGTTGGTTGGCACCGTaGTTTGGGAAGCTGAGAAAG +
Preference number: 5 (lower is better)
Translates to: LSGLKSLSALRLESLTHPCWLAP*FGKLRK
Trigger: CTTTCTCAGCTTCCCAAACAACGGTGCCAACCAACA...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp ATTTCAGTTCCTGTTCCAGAACGTCCAACTTTAACTCGAGTTTGCTaGGAACCACGTCCCCACCCCATAGTGAAAGCTGGAGATCTGAAG +
Preference number: 5 (lower is better)
Translates to: ISVPVPERPTLTRVC*EPRPHPIVKAGDLK
Trigger: CTTCAGATCTCCAGCTTTCACTATGGGGTGGGGACGTGGTTCTCAGCAAACTCGAGTTAAAGTTGGACGTTCTGGAACAGGAACTGAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp CAGAAACAATGGGATCCTTCAGCGTTTGAGCTTTCTGTTGATGCATaGTTGATGCAGGGTCAGTCCCAAGGTCGTCTTCCTCACCATCAT +
Preference number: 5 (lower is better)
Translates to: QKQWDPSAFELSVDA*LMQGQSQGRLPHHH
Trigger: ATGATGGTGAGGAAGACGACCTTGGGACTGACCCTGCATCAATCATGCATCAACAGAAAGCTCAAACGCTGAAGGATCCCATTGTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp TGGGGCACTTCCAATGGACAGTTCATCTTCTTTCCTTCTGTTAACTaGAGTGACAAGAGGTACAGCTACCACAGGCTGCTGTTGTGCATG +
Preference number: 5 (lower is better)
Translates to: WGTSNGQFIFFPSVN*SDKRYSYHRLLLCM
Trigger: CATGCACAACAGCAGCCTGTGGTAGCTGTACCTCTTGTCACTTCAGTTAACAGAAGGAAAGAAGATGAACTGTCCATTGGAAGTGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp ACTTCTACATTCTTCATGAACACGCAGCACGGCCTTCACAGGAACTaGCACTGGTCTGGACTCTGTCACTGTTTTTGTCTTGATTGGGCT +
Preference number: 5 (lower is better)
Translates to: TSTFFMNTQHGLHRN*HWSGLCHCFCLDWA
Trigger: AGCCCAATCAAGACAAAAACAGTGACAGAGTCCAGACCAGTGTCAGTTCCTGTGAAGGCCGTGCTGCGTGTTCATGAAGAATGTAGAAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp GGACCCACCAATGTTACTGGTAGTTTGTTCCAAGGTAACAGAGTCTaGGAATGGCGAATCATCACCAGCTTGAACCGAATCTCCCTCAGT +
Preference number: 5 (lower is better)
Translates to: GPTNVTGSLFQGNRV*EWRIITSLNRISLS
Trigger: ACTGAGGGAGATTCGGTTCAAGCTGGTGATGATTCGCCATTCTCAGACTCTGTTACCTTGGAACAAACTACCAGTAACATTGGTGGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp CGTTTCTGCATTCCAGAAGTTTACAATCCATCTGAGATGAGAACTTaGTCTCCTGGCAGACAGGACCACTGTTCCACTGCCGAAGATGCA +
Preference number: 5 (lower is better)
Translates to: RFCIPEVYNPSEMRT*SPGRQDHCSTAEDA
Trigger: TGCATCTTCGGCAGTGGAACAGTGGTCCTGTCTGCCAGGAGATCAAGTTCTCATCTCAGATGGATTGTAAACTTCTGGAATGCAGAAACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp CTTGTATTGCAGTGTTTAAGGAATGAACTACATGCTGCCCGAAGTTaGCAAGCACAGAGTCCACTATCACGGTGGAGTCCAGCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: LVLQCLRNELHAARS*QAQSPLSRWSPAAS
Trigger: AGAAGCTGCTGGACTCCACCGTGATAGTGGACTCTGTGCTTGTCAACTTCGGGCAGCATGTAGTTCATTCCTTAAACACTGCAATACAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp AGTGCTCGGACTTTGATGATGAGTGAAGCGGTTCGACCCTTGTACTaGATTGTTCTAATAAATGTACCGGCATGGTCCACAGTGAAGGGC +
Preference number: 5 (lower is better)
Translates to: SARTLMMSEAVRPLY*IVLINVPAWSTVKG
Trigger: GCCCTTCACTGTGGACCATGCCGGTACATTTATTAGAACAATTCAGTACAAGGGTCGAACCGCTTCACTCATCATCAAAGTCCGAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp AGAACAATCTTCTCTCCTTCAAACAGCCAGAGATCCCACTTGGACTaGTTGATAAGCAGGGCCCAGGGTAGCAGTTCTATCAACAGGGTT +
Preference number: 5 (lower is better)
Translates to: RTIFSPSNSQRSHLD*LISRAQGSSSINRV
Trigger: AACCCTGTTGATAGAACTGCTACCCTGGGCCCTGCTTATCAATCAGTCCAAGTGGGATCTCTGGCTGTTTGAAGGAGAGAAGATTGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp CCTCTGTATGCCAGCTATGTCAGTGTGTGTCTCCTTATGGTGAGCTaGATCCAAGATAAACTCTGCACGGGTACCATTGTTTTCTGGACT +
Preference number: 5 (lower is better)
Translates to: PLYASYVSVCLLMVS*IQDKLCTGTIVFWT
Trigger: AGTCCAGAAAACAATGGTACCCGTGCAGAGTTTATCTTGGATGCAGCTCACCATAAGGAGACACACACTGACATAGCTGGCATACAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp TCATATTCATGTTCCAGAGCACAAACAATCATCTTCAAAACCCGATaGACCGCACTGCTGTCCAGACGGCAATCTAGAGGCCCGATAACA +
Preference number: 5 (lower is better)
Translates to: SYSCSRAQTIIFKTR*TALLSRRQSRGPIT
Trigger: TGTTATCGGGCCTCTAGATTGCCGTCTGGACAGCAGTGCGGTGCATCGGGTTTTGAAGATGATTGTTTGTGCTCTGGAACATGAATATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp AGCATCTCATTAACTGTGCCTCCAGGCTGTATCTTAGTGGCTATTTaGTTAATGAGGGCTGTTGATATGGGAACCGCACAATCGGAAGGG +
Preference number: 5 (lower is better)
Translates to: SISLTVPPGCILVAI*LMRAVDMGTAQSEG
Trigger: CCCTTCCGATTGTGCGGTTCCCATATCAACAGCCCTCATTAAGCAAATAGCCACTAAGATACAGCCTGGAGGCACAGTTAATGAGATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp CTGATGTCCTGGGAAAGCTCCGAGTCTGATTTCAGCATCAACAAATaGTTCTTCATCCAGTGTCACTACCTCACCATTCCCGCCATCTTT +
Preference number: 5 (lower is better)
Translates to: LMSWESSESDFSINK*FFIQCHYLTIPAIF
Trigger: AAAGATGGCGGGAATGGTGAGGTAGTGACACTGGATGAAGAAGCATTTGTTGATGCTGAAATCAGACTCGGAGCTTTCCCAGGACATCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp AGAATCTTTGTTACTGTAAGGCCAAGTGGGCTCCTGGGACTTTTCTaGCCCATAGAACTCATCAAGCATCTCATTAACTGTGCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: RIFVTVRPSGLLGLF*PIELIKHLINCASR
Trigger: CCTGGAGGCACAGTTAATGAGATGCTTGATGAGTTCTATGGGCCAGAAAAGTCCCAGGAGCCCACTTGGCCTTACAGTAACAAAGATTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ACCAAGGACTTGTTTTCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGTATAACTCTTGGCCTTaGTATGGAGCAGGATACTGC +
Preference number: 5 (lower is better)
Translates to: TKDLFSRTSAVVGMCAQQYNSWP*YGAGYC
Trigger: GCAGTATCCTGCTCCATACAAAGGCCAAGAGTTATA...CTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGAAAACAAGTCCTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAACCATTGTGTCTTCCTTaGCTGCCTGATTCACTGCAA +
Preference number: 5 (lower is better)
Translates to: SGLKSLSALRLESLTHPQPLCLP*LPDSLQ
Trigger: TTGCAGTGAATCAGGCAGCAAAGGAAGACACAATGG...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTGTCTGGCAGATGACCTaGTGGATGCATGGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISVWQMT*WMHGGF
Trigger: AAAGCCTCCATGCATCCACAAGGTCATCTGCCAGAC...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTAAATCCATGGATATTTaGGGTATGGACTGTTGTGGC +
Preference number: 5 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGKSMDI*GMDCCG
Trigger: GCCACAACAGTCCATACCCAAAATATCCATGGATTT...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTGTTGCCACGCTTGTATaGCAGTGTTTAAGGAATGAA +
Preference number: 5 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGVATLV*QCLRNE
Trigger: TTCATTCCTTAAACACTGCAATACAAGCGTGGCAAC...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAACTATACTCAGAGGCTTaGGGTTCCAGACACACATCT +
Preference number: 5 (lower is better)
Translates to: SGLKSLSALRLESLTHPQLYSEA*GSRHTS
Trigger: AGATGTGTGTCTGGAACCCAAAGCCTCTGAGTATAG...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGGATGGGGAAGGCTTGTaGTTGTGTGTCTTCACTGAT +
Preference number: 5 (lower is better)
Translates to: LSGLKSLSALRLESLTHPDGEGL*LCVFTD
Trigger: ATCAGTGAAGACACACAACAACAAGCCTTCCCCATC...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGTGCACAGTGAGTAGGTaGTTTTGCTTGGTGTCCTGT +
Preference number: 5 (lower is better)
Translates to: LSGLKSLSALRLESLTHPCTVSR*FCLVSC
Trigger: ACAGGACACCAAGCAAAACAACCTACTCACTGTGCA...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp AACAATGGGATCCTTCAGCGTTTGAGCTTTCTGTTGATGCATGATTaGTGCAGGGTCAGTCCCAAGGTCGTCTTCCTCACCATCATCATA +
Preference number: 5 (lower is better)
Translates to: NNGILQRLSFLLMHD*CRVSPKVVFLTIII
Trigger: TATGATGATGGTGAGGAAGACGACCTTGGGACTGACCCTGCATCAATCATGCATCAACAGAAAGCTCAAACGCTGAAGGATCCCATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp CCAAACCTCTGTATGCCAGCTATGTCAGTGTGTGTCTCCTTATGGTaGGCTGCATCCAAGATAAACTCTGCACGGGTACCATTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: PNLCMPAMSVCVSLW*AASKINSARVPLFS
Trigger: AGAAAACAATGGTACCCGTGCAGAGTTTATCTTGGATGCAGCTCACCATAAGGAGACACACACTGACATAGCTGGCATACAGAGGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp CAAGCAGCCAGGGCTGTTGGAGTTACAAGTGGTTCACAAGTGCTTTaGGAACCGGATTCACTTGCAGAACTTTGGTCATCTGTCGTATTT +
Preference number: 5 (lower is better)
Translates to: QAARAVGVTSGSQVL*EPDSLAELWSSVVF
Trigger: AAATACGACAGATGACCAAAGTTCTGCAAGTGAATCCGGTTCTCAAAGCACTTGTGAACCACTTGTAACTCCAACAGCCCTGGCTGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp GTTTGCATCGTGACGTTTCTGCATTCCAGAAGTTTACAATCCATCTaGGATGAGAACTTGATCTCCTGGCAGACAGGACCACTGTTCCAC +
Preference number: 5 (lower is better)
Translates to: VCIVTFLHSRSLQSI*DENLISWQTGPLFH
Trigger: GTGGAACAGTGGTCCTGTCTGCCAGGAGATCAAGTTCTCATCTCAGATGGATTGTAAACTTCTGGAATGCAGAAACGTCACGATGCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp GGGCATTTGTTCTGTTGCCACGCTTGTATTGCAGTGTTTAAGGAATaGACTACATGCTGCCCGAAGTTGACAAGCACAGAGTCCACTATC +
Preference number: 5 (lower is better)
Translates to: GHLFCCHACIAVFKE*TTCCPKLTSTESTI
Trigger: GATAGTGGACTCTGTGCTTGTCAACTTCGGGCAGCATGTAGTTCATTCCTTAAACACTGCAATACAAGCGTGGCAACAGAACAAATGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp GACAAGAGGTACAGCTACCACAGGCTGCTGTTGTGCATGTCTATTTaGTCGTTTCTGTGGTTGGTAGATGACCCAAGTATACAGTATTGG +
Preference number: 5 (lower is better)
Translates to: DKRYSYHRLLLCMSI*SFLWLVDDPSIQYW
Trigger: CCAATACTGTATACTTGGGTCATCTACCAACCACAGAAACGAGCAAATAGACATGCACAACAGCAGCCTGTGGTAGCTGTACCTCTTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp AACTTGATCTCCTGGCAGACAGGACCACTGTTCCACTGCCGAAGATaGAGGTTTGGTTCTCTGAAGGAAATGATCATGTATTCCAGTTCA +
Preference number: 5 (lower is better)
Translates to: NLISWQTGPLFHCRR*RFGSLKEMIMYSSS
Trigger: TGAACTGGAATACATGATCATTTCCTTCAGAGAACCAAACCTGCATCTTCGGCAGTGGAACAGTGGTCCTGTCTGCCAGGAGATCAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp AAACTTTGGAATATCTCTGATGTTCTCCTTCATGAGCATCGGTACTaGGCATCTGTTGTGGAAAACGACTCGAGGACTTGGGTCTTCGGA +
Preference number: 5 (lower is better)
Translates to: KLWNISDVLLHEHRY*ASVVENDSRTWVFG
Trigger: TCCGAAGACCCAAGTCCTCGAGTCGTTTTCCACAACAGATGCCCAGTACCGATGCTCATGAAGGAGAACATCAGAGATATTCCAAAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGACTGAGGTTGTAGGTCCATTAAGAAAGTCTTaGATGTGTAGTGTGACGAGA +
Preference number: 5 (lower is better)
Translates to: SRTSAVVGMCAQQTEVVGPLRKS*MCSVTR
Trigger: TCTCGTCACACTACACATCAAAGACTTTCTTAATGG...ACCTACAACCTCAGTCTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTTCTACCTCAGGGCATTaGTTCTGTTGCCACGCTTGT +
Preference number: 5 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISSTSGH*FCCHAC
Trigger: ACAAGCGTGGCAACAGAACAAATGCCCTGAGGTAGA...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAAGATGATAATCTGTTTTaGCACTCCACTGAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: SGLKSLSALRLESLTHPQDDNLF*HSTECS
Trigger: CGAGCACTCAGTGGAGTGCAAAAACAGATTATCATC...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGTACAGCTTGTCCATCTaGACCAATGTAATGCTGGAC +
Preference number: 5 (lower is better)
Translates to: LSGLKSLSALRLESLTHPYSLSI*TNVMLD
Trigger: GTCCAGCATTACATTGGTCAAGATGGACAAGCTGTA...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAACGCCATCTTTCCACTTaGGAGATGTCAGATTATGGA +
Preference number: 5 (lower is better)
Translates to: SGLKSLSALRLESLTHPQRHLST*EMSDYG
Trigger: TCCATAATCTGACATCTCCAAAGTGGAAAGATGGCG...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp AGCATAGCATCAAAGATGGATACTTCCACTCTCTGTTTCCTGTGGTaGCAACTCAGAAGCAAGGAAGGCTGGGACACAATCAAATGGAGA +
Preference number: 5 (lower is better)
Translates to: SIASKMDTSTLCFLW*QLRSKEGWDTIKWR
Trigger: TCTCCATTTGATTGTGTCCCAGCCTTCCTTGCTTCTGAGTTGTCACCACAGGAAACAGAGAGTGGAAGTATCCATCTTTGATGCTATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp CCATCTGTCCACAGATGCCAAAGGGTTTCACCACAGTTTGCATCGTaGCGTTTCTGCATTCCAGAAGTTTACAATCCATCTGAGATGAGA +
Preference number: 5 (lower is better)
Translates to: PSVHRCQRVSPQFAS*RFCIPEVYNPSEMR
Trigger: TCTCATCTCAGATGGATTGTAAACTTCTGGAATGCAGAAACGTCACGATGCAAACTGTGGTGAAACCCTTTGGCATCTGTGGACAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp CCACTGTATACAGGTAATCCATATAAAACGCACCAAACCTCTGTATaGCAGCTATGTCAGTGTGTGTCTCCTTATGGTGAGCTGCATCCA +
Preference number: 5 (lower is better)
Translates to: PLYTGNPYKTHQTSV*QLCQCVSPYGELHP
Trigger: TGGATGCAGCTCACCATAAGGAGACACACACTGACATAGCTGGCATACAGAGGTTTGGTGCGTTTTATATGGATTACCTGTATACAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp ATACTGAAACTCTCTACCTTACACTTGACTTTGGTGTACACATCCTaGACGTCTATGGATGCACTGAGGTCTTCCAGTTCACTGACCATG +
Preference number: 5 (lower is better)
Translates to: ILKLSTLHLTLVYTS*TSMDALRSSSSLTM
Trigger: CATGGTCAGTGAACTGGAAGACCTCAGTGCATCCATAGACGTGCAGGATGTGTACACCAAAGTCAAGTGTAAGGTAGAGAGTTTCAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp CCAACTTCTTACTGTTCCAGGGATGTCACCAGACACAATTGTACTTaGGGAAGGCAGGTTGTCATTTGGAATGAATACACAGCAAGACTG +
Preference number: 5 (lower is better)
Translates to: PTSYCSRDVTRHNCT*GRQVVIWNEYTARL
Trigger: CAGTCTTGCTGTGTATTCATTCCAAATGACAACCTGCCTTCCCCAAGTACAATTGTGTCTGGTGACATCCCTGGAACAGTAAGAAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp CTACTGCTTAAGGGATCTTCAGCAGTCACCATGGAAACACACGCCTaGTTAGGCTTAGCTACATCAGAATCAACTTCTGCGAGATTTAAG +
Preference number: 5 (lower is better)
Translates to: LLLKGSSAVTMETHA*LGLATSESTSARFK
Trigger: CTTAAATCTCGCAGAAGTTGATTCTGATGTAGCTAAGCCTAACCAGGCGTGTGTTTCCATGGTGACTGCTGAAGATCCCTTAAGCAGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGTGTGGCGGACATTTTTaGTTACAGCTTTGGTGTATG +
Preference number: 5 (lower is better)
Translates to: LSGLKSLSALRLESLTHPCGGHF*LQLWCM
Trigger: CATACACCAAAGCTGTAACAAAAAATGTCCGCCACA...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCATTTCTCTGGTTTGAGTaGATCCCACTGAGCAGTGCC +
Preference number: 5 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPFLWFE*IPLSSA
Trigger: GGCACTGCTCAGTGGGATCAACTCAAACCAGAGAAA...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTTGCGCCAGGTACTTTTaGTGCTGCTTTGACAGTAAG +
Preference number: 5 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISCARYF*CCFDSK
Trigger: CTTACTGTCAAAGCAGCACAAAAAGTACCTGGCGCA...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGTGGTCATGTACAAGGTaGATATCTGGCAACTGCAAT +
Preference number: 5 (lower is better)
Translates to: LSGLKSLSALRLESLTHPWSCTR*ISGNCN
Trigger: ATTGCAGTTGCCAGATATCAACCTTGTACATGACCA...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTTTCCAGATTGACAGTTaGACTCGCATTGGGCTATCC +
Preference number: 5 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISFQIDS*TRIGLS
Trigger: GGATAGCCCAATGCGAGTCAAACTGTCAATCTGGAA...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAGTCTGTTCTCTCTCCTaGGCAGACCAAGACAGCAAA +
Preference number: 5 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPVCSLS*ADQDSK
Trigger: TTTGCTGTCTTGGTCTGCCAAGGAGAGAGAACAGAC...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGAGGCTGGTGGCCAAGTaGGTGATGGATGTCAAGGCA +
Preference number: 5 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMRLVAK*VMDVKA
Trigger: TGCCTTGACATCCATCACCAACTTGGCCACCAGCCT...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp ATTGTGAGATTTGGGAGCTCAAAAATACCCTCAGTTACAACAGTCTaGGATCTTTTGGTCCAGAGAGCAGGGAGTTTCAGAAGCTTCCCA +
Preference number: 5 (lower is better)
Translates to: IVRFGSSKIPSVTTV*DLLVQRAGSFRSFP
Trigger: TGGGAAGCTTCTGAAACTCCCTGCTCTCTGGACCAAAAGATCTCAGACTGTTGTAACTGAGGGTATTTTTGAGCTCCCAAATCTCACAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp TACAGAGCAATCCCAAGCTGCATTATACGGATAAACATAGGTAGCTaGTGGTCTGTGATAGAAAGCTTCAGACTCTCTACCAAGGTATGG +
Preference number: 5 (lower is better)
Translates to: YRAIPSCIIRINIGS*WSVIESFRLSTKVW
Trigger: CCATACCTTGGTAGAGAGTCTGAAGCTTTCTATCACAGACCAGCAGCTACCTATGTTTATCCGTATAATGCAGCTTGGGATTGCTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp TCCAGTTATTCGCACAGAAAAATCTGTCAAGATGGGTGTCAAAATTaGTCTCCTTTCTTGATGACGCTGTATGCTGCTGGCCATGTTCCA +
Preference number: 5 (lower is better)
Translates to: SSYSHRKICQDGCQN*SPFLMTLYAAGHVP
Trigger: TGGAACATGGCCAGCAGCATACAGCGTCATCAAGAAAGGAGAGCAATTTTGACACCCATCTTGACAGATTTTTCTGTGCGAATAACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp GCACATTTGACCAATGATGTGCTGCAGTACTTCAGTTCAACATTCTaGATTGAGCCCTCAAGAGTTGGCAGGGGATTCTTAGATTTCACA +
Preference number: 5 (lower is better)
Translates to: AHLTNDVLQYFSSTF*IEPSRVGRGFLDFT
Trigger: TGTGAAATCTAAGAATCCCCTGCCAACTCTTGAGGGCTCAATCCAGAATGTTGAACTGAAGTACTGCAGCACATCATTGGTCAAATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp GTAAGAGTTGAACCTGAGCCACACTTAGGAAGAAGTCCAGGTTTGTaGTTATGTTCACTTCCAAGGAATGGCCACACACTAAAATCTCCT +
Preference number: 5 (lower is better)
Translates to: VRVEPEPHLGRSPGL*LCSLPRNGHTLKSP
Trigger: AGGAGATTTTAGTGTGTGGCCATTCCTTGGAAGTGAACATAACCACAAACCTGGACTTCTTCCTAAGTGTGGCTCAGGTTCAACTCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ACCAAGGACTTGTTTTCCAGGACTAGTGCTGTAGTAGGGATGTGTGCTCAGCAGATGCATTCCATTGTATaGATGGTAATTACCACAGGT +
Preference number: 5 (lower is better)
Translates to: TKDLFSRTSAVVGMCAQQMHSIV*MVITTG
Trigger: ACCTGTGGTAATTACCATCAATACAATGGAATGCAT...CTGCTGAGCACACATCCCTACTACAGCACTAGTCCTGGAAAACAAGTCCTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGACTGTTCAGCATACATaGGGACAGAATGTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: LSGLKSLSALRLESLTHPTVQHT*GQNVPN
Trigger: ATTTGGAACATTCTGTCCCAATGTATGCTGAACAGT...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGGTCCCAGAGGCACATTaGACCAATGATGTGCTGCAG +
Preference number: 5 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMVPEAH*TNDVLQ
Trigger: CTGCAGCACATCATTGGTCAAATGTGCCTCTGGGAC...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTCTCTCTACCTTACACTaGACTTTGGTGTACACATCC +
Preference number: 5 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISLSTLH*TLVYTS
Trigger: GGATGTGTACACCAAAGTCAAGTGTAAGGTAGAGAG...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGCAAATCCGACTTCTTTCTTaGAGGCTTGTTTTAAGGAGA +
Preference number: 5 (lower is better)
Translates to: SGLKSLSALRLESLTHPQIRLLS*RLVLRR
Trigger: TCTCCTTAAAACAAGCCTCAAAGAAAGAAGTCGGAT...TTGCGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGAAACGACTCGAGGACTaGGGTCTTCGGAGAGGGTTA +
Preference number: 5 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMKRLED*GLRRGL
Trigger: TAACCCTCTCCGAAGACCCAAGTCCTCGAGTCGTTT...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp CTTTGGCACAAATTTTTATGGATCCCAAGGTCCCAGAGGCACATTTaGCCAATGATGTGCTGCAGTACTTCAGTTCAACATTCTGGATTG +
Preference number: 5 (lower is better)
Translates to: LWHKFLWIPRSQRHI*PMMCCSTSVQHSGL
Trigger: CAATCCAGAATGTTGAACTGAAGTACTGCAGCACATCATTGGTCAAATGTGCCTCTGGGACCTTGGGATCCATAAAAATTTGTGCCAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp AGGGAAAGAGTCACTTGCTTTCCAAGAAGGGTATATATGCTGAAATaGTGCAAGCTTATGGTCCAAGGAAATGCATCACCCTCTTCAAGG +
Preference number: 5 (lower is better)
Translates to: RERVTCFPRRVYMLK*CKLMVQGNASPSSR
Trigger: CCTTGAAGAGGGTGATGCATTTCCTTGGACCATAAGCTTGCATCATTTCAGCATATATACCCTTCTTGGAAAGCAAGTGACTCTTTCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp CCACAAGGGAAAGAGTCACTTGCTTTCCAAGAAGGGTATATATGCTaGAATGATGCAAGCTTATGGTCCAAGGAAATGCATCACCCTCTT +
Preference number: 5 (lower is better)
Translates to: PQGKESLAFQEGYIC*NDASLWSKEMHHPL
Trigger: AAGAGGGTGATGCATTTCCTTGGACCATAAGCTTGCATCATTTCAGCATATATACCCTTCTTGGAAAGCAAGTGACTCTTTCCCTTGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp TCATACACACCAGGGAGTTTCAAAGATTCAGCGTCCTGTACATACTaGAAGATGCCTGTCCGCAGGTCATCTGAACTTTGTTCAGTTTTA +
Preference number: 5 (lower is better)
Translates to: SYTPGSFKDSASCTY*KMPVRRSSELCSVL
Trigger: TAAAACTGAACAAAGTTCAGATGACCTGCGGACAGGCATCTTTCAGTATGTACAGGACGCTGAATCTTTGAAACTCCCTGGTGTGTATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp TCCACAGATCTGAGGACACCAGTTTCTTCTGGTCATGTACAAGGTTaGTATCTGGCAACTGCAATTCACAAACTTTGCTTTCAGACAGAC +
Preference number: 5 (lower is better)
Translates to: STDLRTPVSSGHVQG*YLATAIHKLCFQTD
Trigger: GTCTGTCTGAAAGCAAAGTTTGTGAATTGCAGTTGCCAGATATCAACCTTGTACATGACCAGAAGAAACTGGTGTCCTCAGATCTGTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp TTCCAAAGTCAAAACTGTGCACCACACATAAATAATGGAACTGTTTaGAGTAGGCACCTGGATGACAGTGCTATACTCAGAGGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: FQSQNCAPHINNGTV*SRHLDDSAILRGFG
Trigger: CCCAAAGCCTCTGAGTATAGCACTGTCATCCAGGTGCCTACTTCAAACAGTTCCATTATTTATGTGTGGTGCACAGTTTTGACTTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp GCCATAAAAACTGTGCAAGTGCACTTAAGCAAAGTAACACTTGTATaGCGAGTAGGGATATATTCCTCCAAAGAAGACACTTCCTCGGGA +
Preference number: 5 (lower is better)
Translates to: AIKTVQVHLSKVTLV*RVGIYSSKEDTSSG
Trigger: TCCCGAGGAAGTGTCTTCTTTGGAGGAATATATCCCTACTCGGCATACAAGTGTTACTTTGCTTAAGTGCACTTGCACAGTTTTTATGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp AGAGCAATCCCAAGCTGCATTATACGGATAAACATAGGTAGCTGCTaGTCTGTGATAGAAAGCTTCAGACTCTCTACCAAGGTATGGATT +
Preference number: 5 (lower is better)
Translates to: RAIPSCIIRINIGSC*SVIESFRLSTKVWI
Trigger: AATCCATACCTTGGTAGAGAGTCTGAAGCTTTCTATCACAGACCAGCAGCTACCTATGTTTATCCGTATAATGCAGCTTGGGATTGCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCGGGATCCTTCAGCGTTaGAGCTTTCTGTTGATGCAT +
Preference number: 5 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLGILQR*SFLLMH
Trigger: ATGCATCAACAGAAAGCTCAAACGCTGAAGGATCCC...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTATCTGGACTGAAGTCACTGTCAGCCTTAAGGCTGGAGTCTTTAACTCATCCGAATTGTAGTTCCTTCTaGTTCCCAACACAAAACTTC +
Preference number: 5 (lower is better)
Translates to: LSGLKSLSALRLESLTHPNCSSF*FPTQNF
Trigger: GAAGTTTTGTGTTGGGAACAAGAAGGAACTACAATT...CGGATGAGTTAAAGACTCCAGCCTTAAGGCTGACAGTGACTTCAGTCCAGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCGTTCAACATTCTGGATaGAGCCCTCAAGAGTTGGCA +
Preference number: 5 (lower is better)
Translates to: LYQINSTEQLSGLKSLSAVQHSG*SPQELA
Trigger: TGCCAACTCTTGAGGGCTCAATCCAGAATGTTGAAC...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAGTCACTGTTTTTGTCTaGATTGGGCTGCTGGCATAT +
Preference number: 5 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPVTVFV*IGLLAY
Trigger: ATATGCCAGCAGCCCAATCAAGACAAAAACAGTGAC...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCCAGACACAATTGTACTaGGGGAAGGCAGGTTGTCAT +
Preference number: 5 (lower is better)
Translates to: LYQINSTEQLSGLKSLSAQTQLY*GKAGCH
Trigger: ATGACAACCTGCCTTCCCCAAGTACAATTGTGTCTG...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTAGATGGGTGTCAAAATaGCTCTCCTTTCTTGATGAC +
Preference number: 5 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISRWVSK*LSFLDD
Trigger: GTCATCAAGAAAGGAGAGCAATTTTGACACCCATCT...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTATGGACAGAAACTTTTaGAAAGCAGGAGATGGCTCT +
Preference number: 5 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISMDRNF*KAGDGS
Trigger: AGAGCCATCTCCTGCTTTCAAAAAGTTTCTGTCCAT...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGGGATCCTCTGTGGTGTaGAAAGGCACAGGCGTGATT +
Preference number: 5 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVGSSVV*KGTGVI
Trigger: AATCACGCCTGTGCCTTTCAACACCACAGAGGATCC...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTTTCTCGAACTACAGCTaGTCCATCTTGACCAATGTA +
Preference number: 5 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISFSNYS*SILTNV
Trigger: TACATTGGTCAAGATGGACAAGCTGTAGTTCGAGAA...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCGATATGTCAGTGCTATaGCCCTGGTGCAGAATCCAT +
Preference number: 5 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLDMSVL*PWCRIH
Trigger: ATGGATTCTGCACCAGGGCAATAGCACTGACATATC...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCGGTGACAAGATGTTTTaGCAATGTAGTCCACGAGCC +
Preference number: 5 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLGDKMF*QCSPRA
Trigger: GGCTCGTGGACTACATTGCAAAAACATCTTGTCACC...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp ATTAATTTTATCCACCAATATCTGAATGGATGGCAAAGGCCGAAGTaGCTGGAAGTTTGTGGCATTCGTGACGTTACTCGAGTTCTTTCC +
Preference number: 5 (lower is better)
Translates to: INFIHQYLNGWQRPK*LEVCGIRDVTRVLS
Trigger: GGAAAGAACTCGAGTAACGTCACGAATGCCACAAACTTCCAGTCACTTCGGCCTTTGCCATCCATTCAGATATTGGTGGATAAAATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp AATCTGTTTTTGCACTCCACTGAGTGCTCGGACTTTGATGATGAGTaGAGCGGTTCGACCCTTGTACTGAATTGTTCTAATAAATGTACC +
Preference number: 5 (lower is better)
Translates to: NLFLHSTECSDFDDE*SGSTLVLNCSNKCT
Trigger: GGTACATTTATTAGAACAATTCAGTACAAGGGTCGAACCGCTTCACTCATCATCAAAGTCCGAGCACTCAGTGGAGTGCAAAAACAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp GTTCGTTGTTTTCTAATATGTACGAAGGCAACTTCTGTTTGGCTGTaGGGCAATCAAAGTGTTCTCGAACTACAGCTTGTCCATCTTGAC +
Preference number: 5 (lower is better)
Translates to: VRCFLICTKATSVWL*GNQSVLELQLVHLD
Trigger: GTCAAGATGGACAAGCTGTAGTTCGAGAACACTTTGATTGCCTCACAGCCAAACAGAAGTTGCCTTCGTACATATTAGAAAACAACGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp TTGTTTAGGACGATTCTCCACAGATCTGAGGACACCAGTTTCTTCTaGTCATGTACAAGGTTGATATCTGGCAACTGCAATTCACAAACT +
Preference number: 5 (lower is better)
Translates to: LFRTILHRSEDTSFF*SCTRLISGNCNSQT
Trigger: AGTTTGTGAATTGCAGTTGCCAGATATCAACCTTGTACATGACCAGAAGAAACTGGTGTCCTCAGATCTGTGGAGAATCGTCCTAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCGTTCGGAGCCCAATTTaGTCCATGGTACATGAATTC +
Preference number: 5 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLVRSPI*SMVHEF
Trigger: GAATTCATGTACCATGGACAAAATTGGGCTCCGAAC...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCCAACCTTCAAAACCATaGTGTCTTCCTTTGCTGCCT +
Preference number: 5 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLQPSKP*CLPLLP
Trigger: AGGCAGCAAAGGAAGACACAATGGTTTTGAAGGTTG...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTTCAGTTGAAGGGAAGGAACAGATTGCAGGCCTGTGCATGAATACCATCAGTCATTTAGCTTCCAGATaGACAGTAGCAGAAAATGGT +
Preference number: 5 (lower is better)
Translates to: ISVEGKEQIAGLCMNTISHLASR*TVAENG
Trigger: ACCATTTTCTGCTACTGTCAATCTGGAAGCTAAATG...ACTGATGGTATTCATGCACAGGCCTGCAATCTGTTCCTTCCCTTCAACTGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGAGGGCATTTGTTCTGTaGCCACGCTTGTATTGCAGT +
Preference number: 5 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMRAFVL*PRLYCS
Trigger: ACTGCAATACAAGCGTGGCAACAGAACAAATGCCCT...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGCATTCGCTGCTGAACTaGAGAGTTGGGTTCCAAAGT +
Preference number: 5 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMHSLLN*RVGFQS
Trigger: ACTTTGGAACCCAACTCTCAAGTTCAGCAGCGAATG...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCGATGTCAAGGCACCTTaGGAAATGTGCTTGACGAAT +
Preference number: 5 (lower is better)
Translates to: LYQINSTEQLSGLKSLSADVKAP*EMCLTN
Trigger: ATTCGTCAAGCACATTTCCAAAGGTGCCTTGACATC...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGTGTGATGGGGAAGGCTaGTTGTTGTGTGTCTTCACT +
Preference number: 5 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMCDGEG*LLCVFT
Trigger: AGTGAAGACACACAACAACAAGCCTTCCCCATCACA...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGAAGTCACAGTCGCCTTaGTGCAATAAAAGCCTACAG +
Preference number: 5 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMKSQSP*CNKSLQ
Trigger: CTGTAGGCTTTTATTGCACAAAGGCGACTGTGACTT...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGCTGTGCTCTTGTAGCTaGAATTGTGAGATTTGGGAG +
Preference number: 5 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMLCSCS*NCEIWE
Trigger: CTCCCAAATCTCACAATTCAAGCTACAAGAGCACAG...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TATTACAGAGGTGGTGGAGTTTTATTTCTTGGTCTGTTTTCTAGGGCCTGTCCAATTTCACACCTGTCATaGGGAAGACTTCATTCATCA +
Preference number: 5 (lower is better)
Translates to: YYRGGGVLFLGLFSRACPISHLS*GRLHSS
Trigger: TGATGAATGAAGTCTTCCCAATGACAGGTGTGAAAT...TGGACAGGCCCTAGAAAACAGACCAAGAAATAAAACTCCACCACCTCTGTAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACCCCTGGTATGCTGGTTaGTCCATGGTACCAACTTCT +
Preference number: 5 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHPWYAG*SMVPTS
Trigger: AGAAGTTGGTACCATGGACAAACCAGCATACCAGGG...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCTTCTGTTCTGGTAATTaGAATTTGGGTAAGGCCACC +
Preference number: 5 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLFCSGN*NLGKAT
Trigger: GGTGGCCTTACCCAAATTCAAATTACCAGAACAGAA...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACTGTTGTGGCCCTGGATaGCCACTGTGTTTACACCAT +
Preference number: 5 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHCCGPG*PLCLHH
Trigger: ATGGTGTAAACACAGTGGCAATCCAGGGCCACAACA...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACGTCAGGTTCGACATTTaGCAGTGGATTTTCCTGCCC +
Preference number: 5 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHVRFDI*QWIFLP
Trigger: GGGCAGGAAAATCCACTGCAAAATGTCGAACCTGAC...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp AGAATTCCTTTCAGACACATGGCTCTGCAACCTACAAATCCAATCTaGCAATCAAAGAAAGGTTCTCCCATCATAAGAGCCTCAATTGTA +
Preference number: 5 (lower is better)
Translates to: RIPFRHMALQPTNPI*QSKKGSPIIRASIV
Trigger: TACAATTGAGGCTCTTATGATGGGAGAACCTTTCTTTGATTGTCAGATTGGATTTGTAGGTTGCAGAGCCATGTGTCTGAAAGGAATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp TACATTGGGACAGAATGTTCCAAATTAATTTTATCCACCAATATCTaGATGGATGGCAAAGGCCGAAGTGACTGGAAGTTTGTGGCATTC +
Preference number: 5 (lower is better)
Translates to: YIGTECSKLILSTNI*MDGKGRSDWKFVAF
Trigger: GAATGCCACAAACTTCCAGTCACTTCGGCCTTTGCCATCCATTCAGATATTGGTGGATAAAATTAATTTGGAACATTCTGTCCCAATGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp CTTTATCAAATCAATTCAACAGAGCAACTATCTGGACTGAAGTCACTGTCAGCCGTTTTATGGATGATTTaGTGTTCTCAGCAGTGCTAC +
Preference number: 5 (lower is better)
Translates to: LYQINSTEQLSGLKSLSAVLWMI*CSQQCY
Trigger: GTAGCACTGCTGAGAACACAAAATCATCCATAAAAC...GGCTGACAGTGACTTCAGTCCAGATAGTTGCTCTGTTGAATTGATTTGATAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCTCAGCAGAAGTGATGTaGACAGAAAGAACAATGTCA +
Preference number: 5 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLSAEVM*TERTMS
Trigger: TGACATTGTTCTTTCTGTCAACATCACTTCTGCTGA...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACAGTCTTGTTGACTTGTaGGACCTTTGCCACTGCTGT +
Preference number: 5 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHSLVDL*DLCHCC
Trigger: ACAGCAGTGGCAAAGGTCCAACAAGTCAACAAGACT...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGAAGGGAAAGAGTCACTaGCTTTCCAAGAAGGGTATA +
Preference number: 5 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMKGKSH*LSKKGI
Trigger: TATACCCTTCTTGGAAAGCAAGTGACTCTTTCCCTT...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGATATTCTTCCCGTGCTaGAAATGTCAGGTGATGTAC +
Preference number: 5 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMIFFPC*KCQVMY
Trigger: GTACATCACCTGACATTTCAAGCACGGGAAGAATAT...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp GGCAACTGCAATTCACAAACTTTGCTTTCAGACAGACTGAATTCTTaGAACGCAACAAAAACCTTCTGGAGTTCATCCCAATATTCCAAA +
Preference number: 5 (lower is better)
Translates to: GNCNSQTLLSDRLNS*NATKTFWSSSQYSK
Trigger: TTTGGAATATTGGGATGAACTCCAGAAGGTTTTTGTTGCGTTTCAAGAATTCAGTCTGTCTGAAAGCAAAGTTTGTGAATTGCAGTTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp ATGACAATGCTCCTTTCCAGAATAGGAGTTAGAGATGGCCAAGTGTaGCTTATAAACTATCTGATATGGCGTGTTATTGATTACTGTAGT +
Preference number: 5 (lower is better)
Translates to: MTMLLSRIGVRDGQV*LINYLIWRVIDYCS
Trigger: ACTACAGTAATCAATAACACGCCATATCAGATAGTTTATAAGCCACACTTGGCCATCTCTAACTCCTATTCTGGAAAGGAGCATTGTCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp GTGTCCATGTTGAATGTTAGAATTCAGTCTTGCACAGCAAAAACCAAACACCTCCATAACTCATTAAAATaGGAGTTACGTACGACTCCA +
Preference number: 5 (lower is better)
Translates to: VSMLNVRIQSCTAKTKHLHNSLK*ELRTTP
Trigger: TGGAGTCGTACGTAACTCCAATTTTAATGAGTTATG...GAGGTGTTTGGTTTTTGCTGTGCAAGACTGAATTCTAACATTCAACATGGACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACGTACAGTCAGAAAAATaGATAGCCTTCCTCAGCACC +
Preference number: 5 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHVQSEK*IAFLST
Trigger: GGTGCTGAGGAAGGCTATCAATTTTTCTGACTGTAC...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATTCCAGTGAGAACTTCTGATTGTGGCATAGAGAAGAAAGGTTTTCTGTGTATGACTCTGATATATTGCTaGCAACAAAAGTGTCTGTGC +
Preference number: 5 (lower is better)
Translates to: IPVRTSDCGIEKKGFLCMTLIYC*QQKCLC
Trigger: GCACAGACACTTTTGTTGCAAGCAATATATCAGAGT...CATACACAGAAAACCTTTCTTCTCTATGCCACAATCAGAAGTTCTCACTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACCTGTCACCTGGGGCTTaGGCACAAATTTTTATGGAT +
Preference number: 5 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHLSPGA*AQIFMD
Trigger: ATCCATAAAAATTTGTGCCAAAGCCCCAGGTGACAG...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp ATCTTCATATTTGGTTTGAATTGTTCACCAAGGACTTGTTTTCCAGGACTAGTGAGTGAACTTTGGTCTTaGACAACTTTCCACGGTAAC +
Preference number: 5 (lower is better)
Translates to: IFIFGLNCSPRTCFPGLVSELWS*TTFHGN
Trigger: GTTACCGTGGAAAGTTGTCAAAGACCAAAGTTCACT...CACTAGTCCTGGAAAACAAGTCCTTGGTGAACAATTCAAACCAAATATGAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 90 bp AATATGAGACCAACTCTGATATATTGCTTGCAACAAAAGTGTCTGTaGTCTTGTAGCTTGAATTGTGAGATTTGGGAGCTCAAAAATACC +
Preference number: 5 (lower is better)
Translates to: NMRPTLIYCLQQKCL*SCSLNCEIWELKNT
Trigger: GGTATTTTTGAGCTCCCAAATCTCACAATTCAAGCTACAAGAGCACAGACACTTTTGTTGCAAGCAATATATCAGAGTTGGTCTCATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACCTTGGTAGACTTTTCTaGGACTATTCCCAAATCCTC +
Preference number: 5 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHLGRLF*DYSQIL
Trigger: GAGGATTTGGGAATAGTCCAAGAAAAGTCTACCAAG...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS-3UTR CAA 90 bp TATGTTCTGTTCTTGTCGGTAGACACAAAGTGTTACTTTAGCTTAGTAAAACACACTTTTTGTGCTGCTTaGACAGTAAGGCTTCCATTG +
Preference number: 5 (lower is better)
Translates to: YVLFLSVDTKCYFSLVKHTFCAA*TVRLPL
Trigger: CAATGGAAGCCTTACTGTCAAAGCAGCACAAAAAGT...GTGTTTTACTAAGCTAAAGTAACACTTTGTGTCTACCGACAAGAACAGAACATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp TTGGGAAGACTTCATTCATCAAAGCTTCATTTACTGTTGAAGAGCTaGCATTTCCAATATGAGACCAACTCTGATATATTGCTTGCAACA +
Preference number: 5 (lower is better)
Translates to: LGRLHSSKLHLLLKS*HFQYETNSDILLAT
Trigger: TGTTGCAAGCAATATATCAGAGTTGGTCTCATATTGGAAATGTCAGCTCTTCAACAGTAAATGAAGCTTTGATGAATGAAGTCTTCCCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 90 bp CCTGAAGATTTTCTTTTCTCTCTTTGGGTCTTTGGGAGTTTAGTGTaGAATACACTTGCAATTGCATTAAGTAAAGGAAAGCACACAACA +
Preference number: 5 (lower is better)
Translates to: PEDFLFSLWVFGSLV*NTLAIALSKGKHTT
Trigger: TGTTGTGTGCTTTCCTTTACTTAATGCAATTGCAAGTGTATTTCACACTAAACTCCCAAAGACCCAAAGAGAGAAAAGAAAATCTTCAGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 90 bp ATAGGAGTTAGAGATGGCCAAGTGTGGCTTATAAACTATCTGATATaGCGTGTTATTGATTACTGTAGTCTTATCTTCAATCTGAATGAC +
Preference number: 5 (lower is better)
Translates to: IGVRDGQVWLINYLI*RVIDYCSLIFNLND
Trigger: GTCATTCAGATTGAAGATAAGACTACAGTAATCAATAACACGCCATATCAGATAGTTTATAAGCCACACTTGGCCATCTCTAACTCCTAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TGGCTGTGTCCAGCTCTGACGACCCCACAGCAGGCGTaGCGTCCCAGCAAGGCAGGGAGCTGGATCTCACGG +
Preference number: 6 (lower is better)
Translates to: WLCPALTTPQQA*RPSKAGSWISR
Trigger: CCGTGAGATCCAGCTCCCTGCCTTGCTGGGACGTCACGCCTGCTGTGGGGTCGTCAGAGCTGGACACAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp GCTGTGTCACCTGCACAGGCAGCACCTGCTGCCCTGTaGACAGCTGTGCATGGTGACCAGACATCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: AVSPAQAAPAAL*TAVHGDQTSCW
Trigger: CCAGCAGGATGTCTGGTCACCATGCACAGCTGTTCACAGGGCAGCAGGTGCTGCCTGTGCAGGTGACACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp GGCTGGATGAGCAGCTTCCGTAACTTCACTGCGTTCACCAATGCCTaGGCGTGCTGTGTCACCTGCACAGGCAGCACCTGCTGCCCTGTG +
Preference number: 6 (lower is better)
Translates to: GWMSSFRNFTAFTNA*ACCVTCTGSTCCPV
Trigger: CACAGGGCAGCAGGTGCTGCCTGTGCAGGTGACACAGCACGCCAAGGCATTGGTGAACGCAGTGAAGTTACGGAAGCTGCTCATCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp CAGTATCTGTTTCTGAAGCGTGGCTGTGTCCAGCTCTaGCGACCCCACAGCAGGCGTGACGTCCCAGCAAGG +
Preference number: 6 (lower is better)
Translates to: QYLFLKRGCVQL*RPHSRRDVPAR
Trigger: CCTTGCTGGGACGTCACGCCTGCTGTGGGGTCGTCAGAGCTGGACACAGCCACGCTTCAGAAACAGATACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp TCCCAGCAAGGCAGGGAGCTGGATCTCACGGCAGGATaGTCGCCCCCTGGACAAATGCTGAAAGTAGCACTG +
Preference number: 6 (lower is better)
Translates to: SQQGRELDLTAG*SPPGQMLKVAL
Trigger: CAGTGCTACTTTCAGCATTTGTCCAGGGGGCGAGCATCCTGCCGTGAGATCCAGCTCCCTGCCTTGCTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp TGTGGTCCCTCTGGAGACTCCGCTCACGAAGGCTCCTaGGCCTCGGGTCAATCCCTCATATGGAAGCCTGAA +
Preference number: 6 (lower is better)
Translates to: CGPSGDSAHEGS*ASGQSLIWKPE
Trigger: TTCAGGCTTCCATATGAGGGATTGACCCGAGGCCCAGGAGCCTTCGTGAGCGGAGTCTCCAGAGGGACCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp TCCCCTGGGAGGAGAGCAGGCACAGGAGACACGTGGAGGAAAACATaGTCCAGGGTGAGCCTTAGCAGTTCCGATGGTGCCTGGTGTGTG +
Preference number: 6 (lower is better)
Translates to: SPGRRAGTGDTWRKT*SRVSLSSSDGAWCV
Trigger: CACACACCAGGCACCATCGGAACTGCTAAGGCTCACCCTGGACAATGTTTTCCTCCACGTGTCTCCTGTGCCTGCTCTCCTCCCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp GCAAAGAGCTTCACAGTAGCTTTGGGGAGCACCCACTaGATCCACAGACTAACACGGCCGCTGGACCCACCA +
Preference number: 6 (lower is better)
Translates to: AKSFTVALGSTH*IHRLTRPLDPP
Trigger: TGGTGGGTCCAGCGGCCGTGTTAGTCTGTGGATGCAGTGGGTGCTCCCCAAAGCTACTGTGAAGCTCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp TTCCGTAACTTCACTGCGTTCACCAATGCCTTGGCGTaGTGTGTCACCTGCACAGGCAGCACCTGCTGCCCT +
Preference number: 6 (lower is better)
Translates to: FRNFTAFTNALA*CVTCTGSTCCP
Trigger: AGGGCAGCAGGTGCTGCCTGTGCAGGTGACACAGCACGCCAAGGCATTGGTGAACGCAGTGAAGTTACGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp ACGACTGGTGAGAGGGCCGGGCAATGCGGTGCTGACTaGCACCACTGTACTGCTCTATTTGCACAATGCGGA +
Preference number: 6 (lower is better)
Translates to: TTGERAGQCGAD*HHCTALFAQCG
Trigger: TCCGCATTGTGCAAATAGAGCAGTACAGTGGTGCCAGTCAGCACCGCATTGCCCGGCCCTCTCACCAGTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp TTGTCCAGGGTGAGCCTTAGCAGTTCCGATGGTGCCTaGTGTGTGAGGTCGTCAGACACTGCCAGGCTCAAC +
Preference number: 6 (lower is better)
Translates to: LSRVSLSSSDGA*CVRSSDTARLN
Trigger: GTTGAGCCTGGCAGTGTCTGACGACCTCACACACCAGGCACCATCGGAACTGCTAAGGCTCACCCTGGACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp GCAGCTTCCGTAACTTCACTGCGTTCACCAATGCCTTaGCGTGCTGTGTCACCTGCACAGGCAGCACCTGCT +
Preference number: 6 (lower is better)
Translates to: AASVTSLRSPMP*RAVSPAQAAPA
Trigger: AGCAGGTGCTGCCTGTGCAGGTGACACAGCACGCCAAGGCATTGGTGAACGCAGTGAAGTTACGGAAGCTGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp AGTCCGAGATCCCATTCCCAATGCTTCTCACTAAGCTaGCGGGGCTGCCGAGGATTTCCAGAGACCCCACCA +
Preference number: 6 (lower is better)
Translates to: SPRSHSQCFSLS*RGCRGFPETPP
Trigger: TGGTGGGGTCTCTGGAAATCCTCGGCAGCCCCGCCAGCTTAGTGAGAAGCATTGGGAATGGGATCTCGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp AGCAGCTTCCGTAACTTCACTGCGTTCACCAATGCCTaGGCGTGCTGTGTCACCTGCACAGGCAGCACCTGC +
Preference number: 6 (lower is better)
Translates to: SSFRNFTAFTNA*ACCVTCTGSTC
Trigger: GCAGGTGCTGCCTGTGCAGGTGACACAGCACGCCAAGGCATTGGTGAACGCAGTGAAGTTACGGAAGCTGCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp TCCAGCGAGAGCCGGCCCATATTCCGGGCCAGGCTGGTGGCCAAGTaGGTGATGGATGTCAAGGCACCTTTGGAAATGTGCTTGACGAAT +
Preference number: 6 (lower is better)
Translates to: SSESRPIFRARLVAK*VMDVKAPLEMCLTN
Trigger: ATTCGTCAAGCACATTTCCAAAGGTGCCTTGACATCCATCACCAACTTGGCCACCAGCCTGGCCCGGAATATGGGCCGGCTCTCGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp TCTAGTTCTAAGTCACCGGTTCCTCTTCGGCCAGGCTaGCGAACAACAGTGACTCCGAGGGCTTGTCTGGCA +
Preference number: 6 (lower is better)
Translates to: SSSKSPVPLRPG*RTTVTPRACLA
Trigger: TGCCAGACAAGCCCTCGGAGTCACTGTTGTTCGGCAGCCTGGCCGAAGAGGAACCGGTGACTTAGAACTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp CAGGGAGCTGGATCTCACGGCAGGATGCTCGCCCCCTaGACAAATGCTGAAAGTAGCACTGTCTGGAACATG +
Preference number: 6 (lower is better)
Translates to: QGAGSHGRMLAP*TNAESSTVWNM
Trigger: CATGTTCCAGACAGTGCTACTTTCAGCATTTGTCCAGGGGGCGAGCATCCTGCCGTGAGATCCAGCTCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp TCTTCCCCTGGGAGGAGAGCAGGCACAGGAGACACGTaGAGGAAAACATTGTCCAGGGTGAGCCTTAGCAGT +
Preference number: 6 (lower is better)
Translates to: SSPGRRAGTGDT*RKTLSRVSLSS
Trigger: ACTGCTAAGGCTCACCCTGGACAATGTTTTCCTCCACGTGTCTCCTGTGCCTGCTCTCCTCCCAGGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp CCAAGGCTTTGCTGGAGACCAGGAGACTCTGCACCCTaGAATACTGAGCAGGGTCTGTTCTCTCTCCTTGGC +
Preference number: 6 (lower is better)
Translates to: PRLCWRPGDSAP*NTEQGLFSLLG
Trigger: GCCAAGGAGAGAGAACAGACCCTGCTCAGTATTCCAGGGTGCAGAGTCTCCTGGTCTCCAGCAAAGCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp GTGTGGTCGGAGGCTATGTACAGCTTCAGGGAGGCATaGATGCTGATGAGCAGGTTCACTGGCTGGATGAGC +
Preference number: 6 (lower is better)
Translates to: VWSEAMYSFREA*MLMSRFTGWMS
Trigger: GCTCATCCAGCCAGTGAACCTGCTCATCAGCATCCATGCCTCCCTGAAGCTGTACATAGCCTCCGACCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp GCATGGCCAGTGCGTGCACCAGCTGCCTTGCTGTGGTaGACACTGGTCCTCTTTCAAACACAGAGAAGGAGA +
Preference number: 6 (lower is better)
Translates to: AWPVRAPAALLW*TLVLFQTQRRR
Trigger: TCTCCTTCTCTGTGTTTGAAAGAGGACCAGTGTTCACCACAGCAAGGCAGCTGGTGCACGCACTGGCCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp ACAGAGTCCACTATCACGGTGGAGTCCAGCAGCTTCTaGACGCCATCACTGGAAAGTGCCATCTGTCCACAG +
Preference number: 6 (lower is better)
Translates to: TESTITVESSSF*TPSLESAICPQ
Trigger: CTGTGGACAGATGGCACTTTCCAGTGATGGCGTGCAGAAGCTGCTGGACTCCACCGTGATAGTGGACTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp TCCTATGTCAGCAGATGGGCTGCATGTGCTGGTGTCTaGTGGAGCTGTACCTACGCTGCTCCAAACTGGAGA +
Preference number: 6 (lower is better)
Translates to: SYVSRWAACAGV*WSCTYAAPNWR
Trigger: TCTCCAGTTTGGAGCAGCGTAGGTACAGCTCCACCAGACACCAGCACATGCAGCCCATCTGCTGACATAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp GAACTGGAAGGACATGCACAGGGATGGGACGAACCATaGGGTAAAACACGAGTCCACTCTGGTGCAAGCAGC +
Preference number: 6 (lower is better)
Translates to: ELEGHAQGWDEP*GKTRVHSGASS
Trigger: GCTGCTTGCACCAGAGTGGACTCGTGTTTTACCCCATGGTTCGTCCCATCCCTGTGCATGTCCTTCCAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp TCACGGTGGAGTCCAGCAGCTTCTGCACGCCATCACTaGAAAGTGCCATCTGTCCACAGATGCCAAAGGGTT +
Preference number: 6 (lower is better)
Translates to: SRWSPAASARHH*KVPSVHRCQRV
Trigger: AACCCTTTGGCATCTGTGGACAGATGGCACTTTCCAGTGATGGCGTGCAGAAGCTGCTGGACTCCACCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp AGGGAGGCATGGATGCTGATGAGCAGGTTCACTGGCTaGATGAGCAGCTTCCGTAACTTCACTGCGTTCACC +
Preference number: 6 (lower is better)
Translates to: REAWMLMSRFTG*MSSFRNFTAFT
Trigger: GGTGAACGCAGTGAAGTTACGGAAGCTGCTCATCCAGCCAGTGAACCTGCTCATCAGCATCCATGCCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp GGTCCTCTTTCAAACACAGAGAAGGAGAGAGGGGTGTaGTCGGAGGCTATGTACAGCTTCAGGGAGGCATGG +
Preference number: 6 (lower is better)
Translates to: GPLSNTEKERGV*SEAMYSFREAW
Trigger: CCATGCCTCCCTGAAGCTGTACATAGCCTCCGACCACACCCCTCTCTCCTTCTCTGTGTTTGAAAGAGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp CAGTGCGTGCACCAGCTGCCTTGCTGTGGTGAACACTaGTCCTCTTTCAAACACAGAGAAGGAGAGAGGGGT +
Preference number: 6 (lower is better)
Translates to: QCVHQLPCCGEH*SSFKHREGERG
Trigger: ACCCCTCTCTCCTTCTCTGTGTTTGAAAGAGGACCAGTGTTCACCACAGCAAGGCAGCTGGTGCACGCACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp CACGAAGGCTCCTGGGCCTCGGGTCAATCCCTCATATaGAAGCCTGAAGAAGTCCGAGATCCCATTCCCAAT +
Preference number: 6 (lower is better)
Translates to: HEGSWASGQSLI*KPEEVRDPIPN
Trigger: ATTGGGAATGGGATCTCGGACTTCTTCAGGCTTCCATATGAGGGATTGACCCGAGGCCCAGGAGCCTTCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp ACTTCTGATGTCAGCAGCAAGCACCCTTCATGCTCTTaGCCTGAACCCCTCACCAGAACCACATCCAAGGCC +
Preference number: 6 (lower is better)
Translates to: TSDVSSKHPSCS*PEPLTRTTSKA
Trigger: GGCCTTGGATGTGGTTCTGGTGAGGGGTTCAGGCCAAGAGCATGAAGGGTGCTTGCTGCTGACATCAGAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp GGGCCGGGCAATGCGGTGCTGACTGGCACCACTGTACTGCTCTATTaGCACAATGCGGATTTTAACACTGTCACTGCCAATGCCACTGTC +
Preference number: 6 (lower is better)
Translates to: GPGNAVLTGTTVLLY*HNADFNTVTANATV
Trigger: GACAGTGGCATTGGCAGTGACAGTGTTAAAATCCGCATTGTGCAAATAGAGCAGTACAGTGGTGCCAGTCAGCACCGCATTGCCCGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp GGATGTCAAGGCACCTTTGGAAATGTGCTTGACGAATaGTGTGGTCCCTCTGGAGACTCCGCTCACGAAGGC +
Preference number: 6 (lower is better)
Translates to: GCQGTFGNVLDE*CGPSGDSAHEG
Trigger: GCCTTCGTGAGCGGAGTCTCCAGAGGGACCACATCATTCGTCAAGCACATTTCCAAAGGTGCCTTGACATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp AGCATAGTGCATGGCCAGTGCGTGCACCAGCTGCCTTaGTGTGGTGAACACTGGTCCTCTTTCAAACACAGA +
Preference number: 6 (lower is better)
Translates to: SIVHGQCVHQLP*CGEHWSSFKHR
Trigger: TCTGTGTTTGAAAGAGGACCAGTGTTCACCACAGCAAGGCAGCTGGTGCACGCACTGGCCATGCACTATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp CGAATCTCCCTCAGTAGTAGTTCCTATGTCAGCAGATaGGCTGCATGTGCTGGTGTCTGGTGGAGCTGTACC +
Preference number: 6 (lower is better)
Translates to: RISLSSSSYVSR*AACAGVWWSCT
Trigger: GGTACAGCTCCACCAGACACCAGCACATGCAGCCCATCTGCTGACATAGGAACTACTACTGAGGGAGATTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp CTGCAGCACATCACCCAGGTCTGCTGTGCTGATATCTaGATCCTCTGTGGTGTTGAAAGGCACAGGCGTGAT +
Preference number: 6 (lower is better)
Translates to: LQHITQVCCADI*ILCGVERHRRD
Trigger: ATCACGCCTGTGCCTTTCAACACCACAGAGGATCCAGATATCAGCACAGCAGACCTGGGTGATGTGCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp ATGTGTAGTGTGACGAGAGACGGTGGGATCCCACTTTaGCTGTCTGTTTCTCCAGGCACAGTCTGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: MCSVTRDGGIPL*LSVSPGTVCSH
Trigger: GTGGCTGCAGACTGTGCCTGGAGAAACAGACAGCAAAAGTGGGATCCCACCGTCTCTCGTCACACTACACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp ACATCACCCAGGTCTGCTGTGCTGATATCTGGATCCTCTGTGGTGTaGAAAGGCACAGGCGTGATTCGTACAAGGGTGAGCACTCGAGGT +
Preference number: 6 (lower is better)
Translates to: TSPRSAVLISGSSVV*KGTGVIRTRVSTRG
Trigger: ACCTCGAGTGCTCACCCTTGTACGAATCACGCCTGTGCCTTTCAACACCACAGAGGATCCAGATATCAGCACAGCAGACCTGGGTGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp GTGGCCAAGTTGGTGATGGATGTCAAGGCACCTTTGGAAATGTGCTaGACGAATGATGTGGTCCCTCTGGAGACTCCGCTCACGAAGGCT +
Preference number: 6 (lower is better)
Translates to: VAKLVMDVKAPLEMC*TNDVVPLETPLTKA
Trigger: AGCCTTCGTGAGCGGAGTCTCCAGAGGGACCACATCATTCGTCAAGCACATTTCCAAAGGTGCCTTGACATCCATCACCAACTTGGCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp TTTTCACAATTGACGACTGGTGAGAGGGCCGGGCAATaGGGTGCTGACTGGCACCACTGTACTGCTCTATTT +
Preference number: 6 (lower is better)
Translates to: FSQLTTGERAGQ*GADWHHCTALF
Trigger: AAATAGAGCAGTACAGTGGTGCCAGTCAGCACCGCATTGCCCGGCCCTCTCACCAGTCGTCAATTGTGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp CAAACCACAAGGGACCTGCAGCACATCACCCAGGTCTaGTGTGCTGATATCTGGATCCTCTGTGGTGTTGAA +
Preference number: 6 (lower is better)
Translates to: QTTRDLQHITQV*CADIWILCGVE
Trigger: TTCAACACCACAGAGGATCCAGATATCAGCACAGCAGACCTGGGTGATGTGCTGCAGGTCCCTTGTGGTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp AGGCGTGATTCGTACAAGGGTGAGCACTCGAGGTTCTaGATATCTCCACAACATCATCCCTGGGCTCTCTTC +
Preference number: 6 (lower is better)
Translates to: RRDSYKGEHSRF*ISPQHHPWALF
Trigger: GAAGAGAGCCCAGGGATGATGTTGTGGAGATATCCAGAACCTCGAGTGCTCACCCTTGTACGAATCACGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp TTCCAGATGAGCGAACTGGAAGGACATGCACAGGGATaGGACGAACCATGGGGTAAAACACGAGTCCACTCT +
Preference number: 6 (lower is better)
Translates to: FQMSELEGHAQG*DEPWGKTRVHS
Trigger: AGAGTGGACTCGTGTTTTACCCCATGGTTCGTCCCATCCCTGTGCATGTCCTTCCAGTTCGCTCATCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp TTCTCCTTCATGAGCATCGGTACTGGGCATCTGTTGTaGAAAACGACTCGAGGACTTGGGTCTTCGGAGAGG +
Preference number: 6 (lower is better)
Translates to: FSFMSIGTGHLL*KTTRGLGSSER
Trigger: CCTCTCCGAAGACCCAAGTCCTCGAGTCGTTTTCCACAACAGATGCCCAGTACCGATGCTCATGAAGGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp AGGTCTGCTGTGCTGATATCTGGATCCTCTGTGGTGTaGAAAGGCACAGGCGTGATTCGTACAAGGGTGAGC +
Preference number: 6 (lower is better)
Translates to: RSAVLISGSSVV*KGTGVIRTRVS
Trigger: GCTCACCCTTGTACGAATCACGCCTGTGCCTTTCAACACCACAGAGGATCCAGATATCAGCACAGCAGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp GGTCAGTCCCAAGGTCGTCTTCCTCACCATCATCATAACTCACAATaGCAGGAACAAATGACCAGGCCCAGGATACCCATCCCTGAGGCT +
Preference number: 6 (lower is better)
Translates to: GQSQGRLPHHHHNSQ*QEQMTRPRIPIPEA
Trigger: AGCCTCAGGGATGGGTATCCTGGGCCTGGTCATTTGTTCCTGCAATTGTGAGTTATGATGATGGTGAGGAAGACGACCTTGGGACTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp TCCCGGGCACCATCAATCTCCACATCAGAGGCTACTCTTGGTTGCTaGAGCTGCACAGTGAGTAGGTTGTTTTGCTTGGTGTCCTGTGCA +
Preference number: 6 (lower is better)
Translates to: SRAPSISTSEATLGC*SCTVSRLFCLVSCA
Trigger: TGCACAGGACACCAAGCAAAACAACCTACTCACTGTGCAGCTCAAGCAACCAAGAGTAGCCTCTGATGTGGAGATTGATGGTGCCCGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TTCCTGAGGACAGATCTGCCAAGCGGATTATCAGCCTaGGGAGCCATGGCAATAGAGCCAACCTTCAAAACC +
Preference number: 6 (lower is better)
Translates to: FLRTDLPSGLSA*GAMAIEPTFKT
Trigger: GGTTTTGAAGGTTGGCTCTATTGCCATGGCTCCTCAGGCTGATAATCCGCTTGGCAGATCTGTCCTCAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TTGAGAGTTCCTCTCACTCTCTGTTGGCACTCCTCCTaGGCCACTGCCTTTCTCTGGTTTGAGTTGATCCCA +
Preference number: 6 (lower is better)
Translates to: LRVPLTLCWHSS*ATAFLWFELIP
Trigger: TGGGATCAACTCAAACCAGAGAAAGGCAGTGGCTCAGGAGGAGTGCCAACAGAGAGTGAGAGGAACTCTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp CGGATTTTAACACTGTCACTGCCAATGCCACTGTCCTaGGCACCACTGTATCGGGAAGAGGTTTCAGCTGTG +
Preference number: 6 (lower is better)
Translates to: RILTLSLPMPLS*APLYREEVSAV
Trigger: CACAGCTGAAACCTCTTCCCGATACAGTGGTGCTCAGGACAGTGGCATTGGCAGTGACAGTGTTAAAATCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp ATACTCAGAGGCTTTGGGTTCCAGACACACATCTCTTaGCCAGTCCTCGTCTCCCTTAGCCTTCACACACAG +
Preference number: 6 (lower is better)
Translates to: ILRGFGFQTHIS*PVLVSLSLHTQ
Trigger: CTGTGTGTGAAGGCTAAGGGAGACGAGGACTGGTCAAGAGATGTGTGTCTGGAACCCAAAGCCTCTGAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp TGTTCCAGAGCACAAACAATCATCTTCAAAACCCGATaGACCGCACTGCTGTCCAGACGGCAATCTAGAGGC +
Preference number: 6 (lower is better)
Translates to: CSRAQTIIFKTR*TALLSRRQSRG
Trigger: GCCTCTAGATTGCCGTCTGGACAGCAGTGCGGTGCATCGGGTTTTGAAGATGATTGTTTGTGCTCTGGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp TTATGGTCCAAGGAAATGCATCACCCTCTTCAAGGATaGGCCGGGGAATCACAAACGGAATCTCCTGCAGAG +
Preference number: 6 (lower is better)
Translates to: LWSKEMHHPLQG*AGESQTESPAE
Trigger: CTCTGCAGGAGATTCCGTTTGTGATTCCCCGGCCCATCCTTGAAGAGGGTGATGCATTTCCTTGGACCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp TCTGGTGCAAGCAGCCAGGGCTGTTGGAGTTACAAGTaGTTCACAAGTGCTTTGAGAACCGGATTCACTTGC +
Preference number: 6 (lower is better)
Translates to: SGASSQGCWSYK*FTSALRTGFTC
Trigger: GCAAGTGAATCCGGTTCTCAAAGCACTTGTGAACCACTTGTAACTCCAACAGCCCTGGCTGCTTGCACCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp ATGTTCTCCTTCATGAGCATCGGTACTGGGCATCTGTaGTGGAAAACGACTCGAGGACTTGGGTCTTCGGAG +
Preference number: 6 (lower is better)
Translates to: MFSFMSIGTGHL*WKTTRGLGSSE
Trigger: CTCCGAAGACCCAAGTCCTCGAGTCGTTTTCCACAACAGATGCCCAGTACCGATGCTCATGAAGGAGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp TTGGTGATGGATGTCAAGGCACCTTTGGAAATGTGCTaGACGAATGATGTGGTCCCTCTGGAGACTCCGCTC +
Preference number: 6 (lower is better)
Translates to: LVMDVKAPLEMC*TNDVVPLETPL
Trigger: GAGCGGAGTCTCCAGAGGGACCACATCATTCGTCAAGCACATTTCCAAAGGTGCCTTGACATCCATCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp CGTGGCTGTTTGGAGCCTGGTCAGCATATAGATGTGTaGGTTGGCACCGTTGTTTGGGAAGCTGAGAAAGTC +
Preference number: 6 (lower is better)
Translates to: RGCLEPGQHIDV*VGTVVWEAEKV
Trigger: GACTTTCTCAGCTTCCCAAACAACGGTGCCAACCAACACATCTATATGCTGACCAGGCTCCAAACAGCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp AAGTCTTTGATGTGTAGTGTGACGAGAGACGGTGGGATCCCACTTTaGCTGTCTGTTTCTCCAGGCACAGTCTGCAGCCACACGATGTTA +
Preference number: 6 (lower is better)
Translates to: KSLMCSVTRDGGIPL*LSVSPGTVCSHTML
Trigger: TAACATCGTGTGGCTGCAGACTGTGCCTGGAGAAACAGACAGCAAAAGTGGGATCCCACCGTCTCTCGTCACACTACACATCAAAGACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp CTGTTTGAAGTAGGCACCTGGATGACAGTGCTATACTCAGAGGCTTaGGGTTCCAGACACACATCTCTTGACCAGTCCTCGTCTCCCTTA +
Preference number: 6 (lower is better)
Translates to: LFEVGTWMTVLYSEA*GSRHTSLDQSSSPL
Trigger: TAAGGGAGACGAGGACTGGTCAAGAGATGTGTGTCTGGAACCCAAAGCCTCTGAGTATAGCACTGTCATCCAGGTGCCTACTTCAAACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp ATCCTTCAGCGTTTGAGCTTTCTGTTGATGCATGATTaGTGCAGGGTCAGTCCCAAGGTCGTCTTCCTCACC +
Preference number: 6 (lower is better)
Translates to: ILQRLSFLLMHD*CRVSPKVVFLT
Trigger: GGTGAGGAAGACGACCTTGGGACTGACCCTGCATCAATCATGCATCAACAGAAAGCTCAAACGCTGAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TGGGATCCTTCAGCGTTTGAGCTTTCTGTTGATGCATaGTTGATGCAGGGTCAGTCCCAAGGTCGTCTTCCT +
Preference number: 6 (lower is better)
Translates to: WDPSAFELSVDA*LMQGQSQGRLP
Trigger: AGGAAGACGACCTTGGGACTGACCCTGCATCAATCATGCATCAACAGAAAGCTCAAACGCTGAAGGATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TTTGTCTTGATTGGGCTGCTGGCATATTCTGAGGCCTaGTATGACTGCTGCTTTCCCAATGGGGCACTTCCA +
Preference number: 6 (lower is better)
Translates to: FVLIGLLAYSEA*YDCCFPNGALP
Trigger: TGGAAGTGCCCCATTGGGAAAGCAGCAGTCATATCAGGCCTCAGAATATGCCAGCAGCCCAATCAAGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp GAATGCCTTCCATCGGGTCCCACAGGAAGCAGCTTTTaGGATGTGACTGCTAGAGTAGAGGTACATCCCATA +
Preference number: 6 (lower is better)
Translates to: ECLPSGPTGSSF*DVTARVEVHPI
Trigger: TATGGGATGTACCTCTACTCTAGCAGTCACATCTCAAAAGCTGCTTCCTGTGGGACCCGATGGAAGGCATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TTGAGTCTTTTCCACTGGAGATGGCATTTGGGGTGCTaGTTCGGGTACTGGCATTTCAGACTTTCCCTCCTG +
Preference number: 6 (lower is better)
Translates to: LSLFHWRWHLGC*FGYWHFRLSLL
Trigger: CAGGAGGGAAAGTCTGAAATGCCAGTACCCGAATCAGCACCCCAAATGCCATCTCCAGTGGAAAAGACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp AATAAATGTACCGGCATGGTCCACAGTGAAGGGCTCTaGCCAACGCCAGTTACCCCAGCCTTCAATACAGAT +
Preference number: 6 (lower is better)
Translates to: NKCTGMVHSEGL*PTPVTPAFNTD
Trigger: ATCTGTATTGAAGGCTGGGGTAACTGGCGTTGGTCAGAGCCCTTCACTGTGGACCATGCCGGTACATTTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TTCTCTCCTTCAAACAGCCAGAGATCCCACTTGGACTaGTTGATAAGCAGGGCCCAGGGTAGCAGTTCTATC +
Preference number: 6 (lower is better)
Translates to: FSPSNSQRSHLD*LISRAQGSSSI
Trigger: GATAGAACTGCTACCCTGGGCCCTGCTTATCAATCAGTCCAAGTGGGATCTCTGGCTGTTTGAAGGAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp CTTGACTTTGGTGTACACATCCTGCACGTCTATGGATaGACTGAGGTCTTCCAGTTCACTGACCATGCAGAC +
Preference number: 6 (lower is better)
Translates to: LDFGVHILHVYG*TEVFQFTDHAD
Trigger: GTCTGCATGGTCAGTGAACTGGAAGACCTCAGTGCATCCATAGACGTGCAGGATGTGTACACCAAAGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp TCAAAATTGCTCTCCTTTCTTGATGACGCTGTATGCTaGTGGCCATGTTCCACTCCAGGGCTGGGTTTTGAG +
Preference number: 6 (lower is better)
Translates to: SKLLSFLDDAVC*WPCSTPGLGFE
Trigger: CTCAAAACCCAGCCCTGGAGTGGAACATGGCCAGCAGCATACAGCGTCATCAAGAAAGGAGAGCAATTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp AGTGACTCCCAAGTGCTCTTGATATGTCAGTGCTATTaGCCTGGTGCAGAATCCATTTTCCCTCCCAGTTCC +
Preference number: 6 (lower is better)
Translates to: SDSQVLLICQCY*PGAESIFPPSS
Trigger: GGAACTGGGAGGGAAAATGGATTCTGCACCAGGGCAATAGCACTGACATATCAAGAGCACTTGGGAGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp AAGTTGGTGATGGATGTCAAGGCACCTTTGGAAATGTaGTTGACGAATGATGTGGTCCCTCTGGAGACTCCG +
Preference number: 6 (lower is better)
Translates to: KLVMDVKAPLEM*LTNDVVPLETP
Trigger: CGGAGTCTCCAGAGGGACCACATCATTCGTCAAGCACATTTCCAAAGGTGCCTTGACATCCATCACCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp CTTGGTTGCTTGAGCTGCACAGTGAGTAGGTTGTTTTaGTTGGTGTCCTGTGCACAGCTGATCTCTGTGATG +
Preference number: 6 (lower is better)
Translates to: LGCLSCTVSRLF*LVSCAQLISVM
Trigger: CATCACAGAGATCAGCTGTGCACAGGACACCAAGCAAAACAACCTACTCACTGTGCAGCTCAAGCAACCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp TACTGGGCATCTGTTGTGGAAAACGACTCGAGGACTTaGGTCTTCGGAGAGGGTTATGTAAGTGACTCCCAA +
Preference number: 6 (lower is better)
Translates to: YWASVVENDSRT*VFGEGYVSDSQ
Trigger: TTGGGAGTCACTTACATAACCCTCTCCGAAGACCCAAGTCCTCGAGTCGTTTTCCACAACAGATGCCCAGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp GTAGTAAACAAAGGTGTCCTCCACATACAGCCGTGCTaGCTTCAGTTCAAAGGTGAACTCGCTGACATCGAG +
Preference number: 6 (lower is better)
Translates to: VVNKGVLHIQPC*LQFKGELADIE
Trigger: CTCGATGTCAGCGAGTTCACCTTTGAACTGAAGCCAGCACGGCTGTATGTGGAGGACACCTTTGTTTACTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp AGTTCCTGTTCCAGAACGTCCAACTTTAACTCGAGTTaGCTGAGAACCACGTCCCCACCCCATAGTGAAAGC +
Preference number: 6 (lower is better)
Translates to: SSCSRTSNFNSS*LRTTSPPHSES
Trigger: GCTTTCACTATGGGGTGGGGACGTGGTTCTCAGCAAACTCGAGTTAAAGTTGGACGTTCTGGAACAGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp ATATCTCTGATGTTCTCCTTCATGAGCATCGGTACTGGGCATCTGTaGTGGAAAACGACTCGAGGACTTGGGTCTTCGGAGAGGGTTATG +
Preference number: 6 (lower is better)
Translates to: ISLMFSFMSIGTGHL*WKTTRGLGSSERVM
Trigger: CATAACCCTCTCCGAAGACCCAAGTCCTCGAGTCGTTTTCCACAACAGATGCCCAGTACCGATGCTCATGAAGGAGAACATCAGAGATAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp CCTTCCTCAGCACCAGATCAGTTGCAGAAATATCCATaGATGCACGATCCCATAACTCACCCACGGTATAGC +
Preference number: 6 (lower is better)
Translates to: PSSAPDQLQKYP*MHDPITHPRYS
Trigger: GCTATACCGTGGGTGAGTTATGGGATCGTGCATTCATGGATATTTCTGCAACTGATCTGGTGCTGAGGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TGTATGCCAGCTATGTCAGTGTGTGTCTCCTTATGGTaGGCTGCATCCAAGATAAACTCTGCACGGGTACCA +
Preference number: 6 (lower is better)
Translates to: CMPAMSVCVSLW*AASKINSARVP
Trigger: TGGTACCCGTGCAGAGTTTATCTTGGATGCAGCTCACCATAAGGAGACACACACTGACATAGCTGGCATACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TTGAGGTTTGACAGTGATGCTAACACACATGGCTTATaGGGGTGCGGGACAGTTTCCATGGAGACCACGATT +
Preference number: 6 (lower is better)
Translates to: LRFDSDANTHGL*GCGTVSMETTI
Trigger: AATCGTGGTCTCCATGGAAACTGTCCCGCACCCTCATAAGCCATGTGTGTTAGCATCACTGTCAAACCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp CTCGAGGACTTGGGTCTTCGGAGAGGGTTATGTAAGTaGCTCCCAAGTGCTCTTGATATGTCAGTGCTATTG +
Preference number: 6 (lower is better)
Translates to: LEDLGLRRGLCK*LPSALDMSVLL
Trigger: CAATAGCACTGACATATCAAGAGCACTTGGGAGTCACTTACATAACCCTCTCCGAAGACCCAAGTCCTCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp GCCAGCTATGTCAGTGTGTGTCTCCTTATGGTGAGCTaGATCCAAGATAAACTCTGCACGGGTACCATTGTT +
Preference number: 6 (lower is better)
Translates to: ASYVSVCLLMVS*IQDKLCTGTIV
Trigger: AACAATGGTACCCGTGCAGAGTTTATCTTGGATGCAGCTCACCATAAGGAGACACACACTGACATAGCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp CAGCCAGGGCTGTTGGAGTTACAAGTGGTTCACAAGTaGTTTGAGAACCGGATTCACTTGCAGAACTTTGGT +
Preference number: 6 (lower is better)
Translates to: QPGLLELQVVHK*FENRIHLQNFG
Trigger: ACCAAAGTTCTGCAAGTGAATCCGGTTCTCAAAGCACTTGTGAACCACTTGTAACTCCAACAGCCCTGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp TCCTGGCAGACAGGACCACTGTTCCACTGCCGAAGATaGAGGTTTGGTTCTCTGAAGGAAATGATCATGTAT +
Preference number: 6 (lower is better)
Translates to: SWQTGPLFHCRR*RFGSLKEMIMY
Trigger: ATACATGATCATTTCCTTCAGAGAACCAAACCTGCATCTTCGGCAGTGGAACAGTGGTCCTGTCTGCCAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp ATCTCCACATCAGAGGCTACTCTTGGTTGCTTGAGCTaGACAGTGAGTAGGTTGTTTTGCTTGGTGTCCTGT +
Preference number: 6 (lower is better)
Translates to: ISTSEATLGCLS*TVSRLFCLVSC
Trigger: ACAGGACACCAAGCAAAACAACCTACTCACTGTGCAGCTCAAGCAACCAAGAGTAGCCTCTGATGTGGAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp AAGGGATCTTCAGCAGTCACCATGGAAACACACGCCTaGTTAGGCTTAGCTACATCAGAATCAACTTCTGCG +
Preference number: 6 (lower is better)
Translates to: KGSSAVTMETHA*LGLATSESTSA
Trigger: CGCAGAAGTTGATTCTGATGTAGCTAAGCCTAACCAGGCGTGTGTTTCCATGGTGACTGCTGAAGATCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp GGAGGAGATGCAGAACTGACACAGCTTCTGATGTCCTaGGAAAGCTCCGAGTCTGATTTCAGCATCAACAAA +
Preference number: 6 (lower is better)
Translates to: GGDAELTQLLMS*ESSESDFSINK
Trigger: TTTGTTGATGCTGAAATCAGACTCGGAGCTTTCCCAGGACATCAGAAGCTGTGTCAGTTCTGCATCTCCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp CCATCAATCTCCACATCAGAGGCTACTCTTGGTTGCTaGAGCTGCACAGTGAGTAGGTTGTTTTGCTTGGTG +
Preference number: 6 (lower is better)
Translates to: PSISTSEATLGC*SCTVSRLFCLV
Trigger: CACCAAGCAAAACAACCTACTCACTGTGCAGCTCAAGCAACCAAGAGTAGCCTCTGATGTGGAGATTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp GGTAATTTCAGTTCCTGTTCCAGAACGTCCAACTTTAACTCGAGTTaGCTGAGAACCACGTCCCCACCCCATAGTGAAAGCTGGAGATCT +
Preference number: 6 (lower is better)
Translates to: GNFSSCSRTSNFNSS*LRTTSPPHSESWRS
Trigger: AGATCTCCAGCTTTCACTATGGGGTGGGGACGTGGTTCTCAGCAAACTCGAGTTAAAGTTGGACGTTCTGGAACAGGAACTGAAATTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp CTTTATTTGCGGCAAACACAGGACAAGTGTCCCTGGTATGCTGGTTaGTCCATGGTACCAACTTCTTACTGTTCCAGGGATGTCACCAGA +
Preference number: 6 (lower is better)
Translates to: LYLRQTQDKCPWYAG*SMVPTSYCSRDVTR
Trigger: TCTGGTGACATCCCTGGAACAGTAAGAAGTTGGTACCATGGACAAACCAGCATACCAGGGACACTTGTCCTGTGTTTGCCGCAAATAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp ACATGGCTTATGAGGGTGCGGGACAGTTTCCATGGAGACCACGATTaGGGTAGTATGGACAGAAACTTTTTGAAAGCAGGAGATGGCTCT +
Preference number: 6 (lower is better)
Translates to: TWLMRVRDSFHGDHD*GSMDRNFLKAGDGS
Trigger: AGAGCCATCTCCTGCTTTCAAAAAGTTTCTGTCCATACTACCCAAATCGTGGTCTCCATGGAAACTGTCCCGCACCCTCATAAGCCATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp GCAAGCAGCCAGGGCTGTTGGAGTTACAAGTGGTTCACAAGTGCTTaGAGAACCGGATTCACTTGCAGAACTTTGGTCATCTGTCGTATT +
Preference number: 6 (lower is better)
Translates to: ASSQGCWSYKWFTSA*RTGFTCRTLVICRI
Trigger: AATACGACAGATGACCAAAGTTCTGCAAGTGAATCCGGTTCTCAAAGCACTTGTGAACCACTTGTAACTCCAACAGCCCTGGCTGCTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp ACTTGGGTCTTCGGAGAGGGTTATGTAAGTGACTCCCAAGTGCTCTaGATATGTCAGTGCTATTGCCCTGGTGCAGAATCCATTTTCCCT +
Preference number: 6 (lower is better)
Translates to: TWVFGEGYVSDSQVL*ICQCYCPGAESIFP
Trigger: AGGGAAAATGGATTCTGCACCAGGGCAATAGCACTGACATATCAAGAGCACTTGGGAGTCACTTACATAACCCTCTCCGAAGACCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp CTGCAGAGGTTCCATGTACTTGTGACCAGCACTAATAATCTTTATTaGCGGCAAACACAGGACAAGTGTCCCTGGTATGCTGGTTTGTCC +
Preference number: 6 (lower is better)
Translates to: LQRFHVLVTSTNNLY*RQTQDKCPWYAGLS
Trigger: GGACAAACCAGCATACCAGGGACACTTGTCCTGTGTTTGCCGCAAATAAAGATTATTAGTGCTGGTCACAAGTACATGGAACCTCTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp GGAAAGTGCCATCTGTCCACAGATGCCAAAGGGTTTCACCACAGTTaGCATCGTGACGTTTCTGCATTCCAGAAGTTTACAATCCATCTG +
Preference number: 6 (lower is better)
Translates to: GKCHLSTDAKGFHHS*HRDVSAFQKFTIHL
Trigger: CAGATGGATTGTAAACTTCTGGAATGCAGAAACGTCACGATGCAAACTGTGGTGAAACCCTTTGGCATCTGTGGACAGATGGCACTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TCAAAGATGGATACTTCCACTCTCTGTTTCCTGTGGTaGCAACTCAGAAGCAAGGAAGGCTGGGACACAATC +
Preference number: 6 (lower is better)
Translates to: SKMDTSTLCFLW*QLRSKEGWDTI
Trigger: GATTGTGTCCCAGCCTTCCTTGCTTCTGAGTTGTCACCACAGGAAACAGAGAGTGGAAGTATCCATCTTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp CCAGGGAGTTTCAAAGATTCAGCGTCCTGTACATACTaGAAGATGCCTGTCCGCAGGTCATCTGAACTTTGT +
Preference number: 6 (lower is better)
Translates to: PGSFKDSASCTY*KMPVRRSSELC
Trigger: ACAAAGTTCAGATGACCTGCGGACAGGCATCTTTCAGTATGTACAGGACGCTGAATCTTTGAAACTCCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp AGTGACAAGAGGTACAGCTACCACAGGCTGCTGTTGTaGATGTCTATTTGCTCGTTTCTGTGGTTGGTAGAT +
Preference number: 6 (lower is better)
Translates to: SDKRYSYHRLLL*MSICSFLWLVD
Trigger: ATCTACCAACCACAGAAACGAGCAAATAGACATGCACAACAGCAGCCTGTGGTAGCTGTACCTCTTGTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp TGGGAAAGCTCCGAGTCTGATTTCAGCATCAACAAATaGTTCTTCATCCAGTGTCACTACCTCACCATTCCC +
Preference number: 6 (lower is better)
Translates to: WESSESDFSINK*FFIQCHYLTIP
Trigger: GGGAATGGTGAGGTAGTGACACTGGATGAAGAAGCATTTGTTGATGCTGAAATCAGACTCGGAGCTTTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp TATGTAAGTGACTCCCAAGTGCTCTTGATATGTCAGTaGTATTGCCCTGGTGCAGAATCCATTTTCCCTCCC +
Preference number: 6 (lower is better)
Translates to: YVSDSQVLLICQ*YCPGAESIFPP
Trigger: GGGAGGGAAAATGGATTCTGCACCAGGGCAATAGCACTGACATATCAAGAGCACTTGGGAGTCACTTACATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp CCTGTAGCAAACCACCTCTTAAATCCATGGATATTTTaGGTATGGACTGTTGTGGCCCTGGATTGCCACTGT +
Preference number: 6 (lower is better)
Translates to: PVANHLLNPWIF*VWTVVALDCHC
Trigger: ACAGTGGCAATCCAGGGCCACAACAGTCCATACCCAAAATATCCATGGATTTAAGAGGTGGTTTGCTACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp GTTGAACCTGAGCCACACTTAGGAAGAAGTCCAGGTTaGTGGTTATGTTCACTTCCAAGGAATGGCCACACA +
Preference number: 6 (lower is better)
Translates to: VEPEPHLGRSPG*WLCSLPRNGHT
Trigger: TGTGTGGCCATTCCTTGGAAGTGAACATAACCACAAACCTGGACTTCTTCCTAAGTGTGGCTCAGGTTCAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp AATGCGGTGCTGACTGGCACCACTGTACTGCTCTATTaGCACAATGCGGATTTTAACACTGTCACTGCCAAT +
Preference number: 6 (lower is better)
Translates to: NAVLTGTTVLLY*HNADFNTVTAN
Trigger: ATTGGCAGTGACAGTGTTAAAATCCGCATTGTGCAAATAGAGCAGTACAGTGGTGCCAGTCAGCACCGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp ATGAGGGTGCGGGACAGTTTCCATGGAGACCACGATTaGGGTAGTATGGACAGAAACTTTTTGAAAGCAGGA +
Preference number: 6 (lower is better)
Translates to: MRVRDSFHGDHD*GSMDRNFLKAG
Trigger: TCCTGCTTTCAAAAAGTTTCTGTCCATACTACCCAAATCGTGGTCTCCATGGAAACTGTCCCGCACCCTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp GATCCAAGGCTTGCGCCAGGTACTTTTTGTGCTGCTTaGACAGTAAGGCTTCCATTGAGGTTTGACAGTGAT +
Preference number: 6 (lower is better)
Translates to: DPRLAPGTFCAA*TVRLPLRFDSD
Trigger: ATCACTGTCAAACCTCAATGGAAGCCTTACTGTCAAAGCAGCACAAAAAGTACCTGGCGCAAGCCTTGGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp ACCTGTAGCAAACCACCTCTTAAATCCATGGATATTTaGGGTATGGACTGTTGTGGCCCTGGATTGCCACTG +
Preference number: 6 (lower is better)
Translates to: TCSKPPLKSMDI*GMDCCGPGLPL
Trigger: CAGTGGCAATCCAGGGCCACAACAGTCCATACCCAAAATATCCATGGATTTAAGAGGTGGTTTGCTACAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp CAGGGCTGTTGGAGTTACAAGTGGTTCACAAGTGCTTaGAGAACCGGATTCACTTGCAGAACTTTGGTCATC +
Preference number: 6 (lower is better)
Translates to: QGCWSYKWFTSA*RTGFTCRTLVI
Trigger: GATGACCAAAGTTCTGCAAGTGAATCCGGTTCTCAAAGCACTTGTGAACCACTTGTAACTCCAACAGCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp CTACCTCAGGGCATTTGTTCTGTTGCCACGCTTGTATaGCAGTGTTTAAGGAATGAACTACATGCTGCCCGA +
Preference number: 6 (lower is better)
Translates to: LPQGICSVATLV*QCLRNELHAAR
Trigger: TCGGGCAGCATGTAGTTCATTCCTTAAACACTGCAATACAAGCGTGGCAACAGAACAAATGCCCTGAGGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp AAAGAGAGGGCTGAACACGATCATTCGCTGCTGAACTaGAGAGTTGGGTTCCAAAGTCAAAACTGTGCACCA +
Preference number: 6 (lower is better)
Translates to: KERAEHDHSLLN*RVGFQSQNCAP
Trigger: TGGTGCACAGTTTTGACTTTGGAACCCAACTCTCAAGTTCAGCAGCGAATGATCGTGTTCAGCCCTCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp CTGTGCACAGCTGATCTCTGTGATGGGGAAGGCTTGTaGTTGTGTGTCTTCACTGATGCTTACAACAAAGAG +
Preference number: 6 (lower is better)
Translates to: LCTADLCDGEGL*LCVFTDAYNKE
Trigger: CTCTTTGTTGTAAGCATCAGTGAAGACACACAACAACAAGCCTTCCCCATCACAGAGATCAGCTGTGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp GTTCCAGGGATGTCACCAGACACAATTGTACTTGGGGAAGGCAGGTaGTCATTTGGAATGAATACACAGCAAGACTGTACATCAAGCTGT +
Preference number: 6 (lower is better)
Translates to: VPGMSPDTIVLGEGR*SFGMNTQQDCTSSC
Trigger: ACAGCTTGATGTACAGTCTTGCTGTGTATTCATTCCAAATGACAACCTGCCTTCCCCAAGTACAATTGTGTCTGGTGACATCCCTGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp CTCCAGTTATTCGCACAGAAAAATCTGTCAAGATGGGTGTCAAAATaGCTCTCCTTTCTTGATGACGCTGTATGCTGCTGGCCATGTTCC +
Preference number: 6 (lower is better)
Translates to: LQLFAQKNLSRWVSK*LSFLDDAVCCWPCS
Trigger: GGAACATGGCCAGCAGCATACAGCGTCATCAAGAAAGGAGAGCAATTTTGACACCCATCTTGACAGATTTTTCTGTGCGAATAACTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp AGGAATGATGATCCAAGGCTTGCGCCAGGTACTTTTTGTGCTGCTTaGACAGTAAGGCTTCCATTGAGGTTTGACAGTGATGCTAACACA +
Preference number: 6 (lower is better)
Translates to: RNDDPRLAPGTFCAA*TVRLPLRFDSDANT
Trigger: TGTGTTAGCATCACTGTCAAACCTCAATGGAAGCCTTACTGTCAAAGCAGCACAAAAAGTACCTGGCGCAAGCCTTGGATCATCATTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp CCGTGCTTGAAATGTCAGGTGATGTACAAGGTCAGGTTCGACATTTaGCAGTGGATTTTCCTGCCCTCTTCCTGGAATAATCTGTGTTTC +
Preference number: 6 (lower is better)
Translates to: PCLKCQVMYKVRFDI*QWIFLPSSWNNLCF
Trigger: GAAACACAGATTATTCCAGGAAGAGGGCAGGAAAATCCACTGCAAAATGTCGAACCTGACCTTGTACATCACCTGACATTTCAAGCACGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TATGGATCCCAAGGTCCCAGAGGCACATTTGACCAATaGTGTGCTGCAGTACTTCAGTTCAACATTCTGGAT +
Preference number: 6 (lower is better)
Translates to: YGSQGPRGTFDQ*CAAVLQFNILD
Trigger: ATCCAGAATGTTGAACTGAAGTACTGCAGCACATCATTGGTCAAATGTGCCTCTGGGACCTTGGGATCCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp GTAACAGAGTCTGAGAATGGCGAATCATCACCAGCTTaGACCGAATCTCCCTCAGTAGTAGTTCCTATGTCA +
Preference number: 6 (lower is better)
Translates to: VTESENGESSPA*TESPSVVVPMS
Trigger: TGACATAGGAACTACTACTGAGGGAGATTCGGTTCAAGCTGGTGATGATTCGCCATTCTCAGACTCTGTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TGTCTTCTGTGCTTCATCACAGTGAACTTTGGTCTTTaGCAACTTTCCACGGTAACATTTGGGGACAGGAGG +
Preference number: 6 (lower is better)
Translates to: CLLCFITVNFGL*QLSTVTFGDRR
Trigger: CCTCCTGTCCCCAAATGTTACCGTGGAAAGTTGTCAAAGACCAAAGTTCACTGTGATGAAGCACAGAAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp AGGGCTGTTGGAGTTACAAGTGGTTCACAAGTGCTTTaGGAACCGGATTCACTTGCAGAACTTTGGTCATCT +
Preference number: 6 (lower is better)
Translates to: RAVGVTSGSQVL*EPDSLAELWSS
Trigger: AGATGACCAAAGTTCTGCAAGTGAATCCGGTTCTCAAAGCACTTGTGAACCACTTGTAACTCCAACAGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp GTGACGTTTCTGCATTCCAGAAGTTTACAATCCATCTaGGATGAGAACTTGATCTCCTGGCAGACAGGACCA +
Preference number: 6 (lower is better)
Translates to: VTFLHSRSLQSI*DENLISWQTGP
Trigger: TGGTCCTGTCTGCCAGGAGATCAAGTTCTCATCTCAGATGGATTGTAAACTTCTGGAATGCAGAAACGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TTGCACTCCACTGAGTGCTCGGACTTTGATGATGAGTaGAGCGGTTCGACCCTTGTACTGAATTGTTCTAAT +
Preference number: 6 (lower is better)
Translates to: LHSTECSDFDDE*SGSTLVLNCSN
Trigger: ATTAGAACAATTCAGTACAAGGGTCGAACCGCTTCACTCATCATCAAAGTCCGAGCACTCAGTGGAGTGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp CAGATTGACAGTTTGACTCGCATTGGGCTATCCCACTaGCTCAGCTGCTCATTCCTGTCAGAATCTTTGTTA +
Preference number: 6 (lower is better)
Translates to: QIDSLTRIGLSH*LSCSFLSESLL
Trigger: TAACAAAGATTCTGACAGGAATGAGCAGCTGAGTCAGTGGGATAGCCCAATGCGAGTCAAACTGTCAATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp TACAGCTACCACAGGCTGCTGTTGTGCATGTCTATTTaGTCGTTTCTGTGGTTGGTAGATGACCCAAGTATA +
Preference number: 6 (lower is better)
Translates to: YSYHRLLLCMSI*SFLWLVDDPSI
Trigger: TATACTTGGGTCATCTACCAACCACAGAAACGAGCAAATAGACATGCACAACAGCAGCCTGTGGTAGCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp TTATTTGCGGCAAACACAGGACAAGTGTCCCTGGTATaGTGGTTTGTCCATGGTACCAACTTCTTACTGTTC +
Preference number: 6 (lower is better)
Translates to: LFAANTGQVSLV*WFVHGTNFLLF
Trigger: GAACAGTAAGAAGTTGGTACCATGGACAAACCAGCATACCAGGGACACTTGTCCTGTGTTTGCCGCAAATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp TTAACTGTGCCTCCAGGCTGTATCTTAGTGGCTATTTaGTTAATGAGGGCTGTTGATATGGGAACCGCACAA +
Preference number: 6 (lower is better)
Translates to: LTVPPGCILVAI*LMRAVDMGTAQ
Trigger: TTGTGCGGTTCCCATATCAACAGCCCTCATTAAGCAAATAGCCACTAAGATACAGCCTGGAGGCACAGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp ACCAATGATGTGCTGCAGTACTTCAGTTCAACATTCTaGATTGAGCCCTCAAGAGTTGGCAGGGGATTCTTA +
Preference number: 6 (lower is better)
Translates to: TNDVLQYFSSTF*IEPSRVGRGFL
Trigger: TAAGAATCCCCTGCCAACTCTTGAGGGCTCAATCCAGAATGTTGAACTGAAGTACTGCAGCACATCATTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp ATCCATGGATATTTTGGGTATGGACTGTTGTGGCCCTaGATTGCCACTGTGTTTACACCATTTAGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: IHGYFGYGLLWP*IATVFTPFSFQ
Trigger: CTGGAAGCTAAATGGTGTAAACACAGTGGCAATCCAGGGCCACAACAGTCCATACCCAAAATATCCATGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp GCAAACCACCTCTTAAATCCATGGATATTTTGGGTATaGACTGTTGTGGCCCTGGATTGCCACTGTGTTTAC +
Preference number: 6 (lower is better)
Translates to: ANHLLNPWIFWV*TVVALDCHCVY
Trigger: GTAAACACAGTGGCAATCCAGGGCCACAACAGTCCATACCCAAAATATCCATGGATTTAAGAGGTGGTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp ATTTTCCAGACATATTTGACGTGGCTGTTTGGAGCCTaGTCAGCATATAGATGTGTTGGTTGGCACCGTTGT +
Preference number: 6 (lower is better)
Translates to: IFQTYLTWLFGA*SAYRCVGWHRC
Trigger: ACAACGGTGCCAACCAACACATCTATATGCTGACCAGGCTCCAAACAGCCACGTCAAATATGTCTGGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp TCCAGACGGCAATCTAGAGGCCCGATAACAAGACTCTaGGTAGACTTTTCTTGGACTATTCCCAAATCCTCA +
Preference number: 6 (lower is better)
Translates to: SRRQSRGPITRL*VDFSWTIPKSS
Trigger: TGAGGATTTGGGAATAGTCCAAGAAAAGTCTACCAAGAGTCTTGTTATCGGGCCTCTAGATTGCCGTCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp TGGTCGATACTGAAACTCTCTACCTTACACTTGACTTaGGTGTACACATCCTGCACGTCTATGGATGCACTG +
Preference number: 6 (lower is better)
Translates to: WSILKLSTLHLT*VYTSCTSMDAL
Trigger: CAGTGCATCCATAGACGTGCAGGATGTGTACACCAAAGTCAAGTGTAAGGTAGAGAGTTTCAGTATCGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp CATCTGTCCACAGATGCCAAAGGGTTTCACCACAGTTaGCATCGTGACGTTTCTGCATTCCAGAAGTTTACA +
Preference number: 6 (lower is better)
Translates to: HLSTDAKGFHHS*HRDVSAFQKFT
Trigger: TGTAAACTTCTGGAATGCAGAAACGTCACGATGCAAACTGTGGTGAAACCCTTTGGCATCTGTGGACAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp TGCACAGCTGATCTCTGTGATGGGGAAGGCTTGTTGTaGTGTGTCTTCACTGATGCTTACAACAAAGAGTAC +
Preference number: 6 (lower is better)
Translates to: CTADLCDGEGLL*CVFTDAYNKEY
Trigger: GTACTCTTTGTTGTAAGCATCAGTGAAGACACACAACAACAAGCCTTCCCCATCACAGAGATCAGCTGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp TACCACAGGCTGCTGTTGTGCATGTCTATTTGCTCGTTTCTGTGGTaGGTAGATGACCCAAGTATACAGTATTGGGTCAATGTTAACAGC +
Preference number: 6 (lower is better)
Translates to: YHRLLLCMSICSFLW*VDDPSIQYWVNVNS
Trigger: GCTGTTAACATTGACCCAATACTGTATACTTGGGTCATCTACCAACCACAGAAACGAGCAAATAGACATGCACAACAGCAGCCTGTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp CTTGAAATGATGTCTTCTGTGCTTCATCACAGTGAACTTTGGTCTTaGACAACTTTCCACGGTAACATTTGGGGACAGGAGGCTCATCCA +
Preference number: 6 (lower is better)
Translates to: LEMMSSVLHHSELWS*TTFHGNIWGQEAHP
Trigger: TGGATGAGCCTCCTGTCCCCAAATGTTACCGTGGAAAGTTGTCAAAGACCAAAGTTCACTGTGATGAAGCACAGAAGACATCATTTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp TGGCGTGTTATTGATTACTGTAGTCTTATCTTCAATCTGAATGACTaGTATGCCGTGCTGCACCATGGAGGAGATGCAGAACTGACACAG +
Preference number: 6 (lower is better)
Translates to: WRVIDYCSLIFNLND*YAVLHHGGDAELTQ
Trigger: CTGTGTCAGTTCTGCATCTCCTCCATGGTGCAGCACGGCATACAAGTCATTCAGATTGAAGATAAGACTACAGTAATCAATAACACGCCA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TTTGGGAGCTCAAAAATACCCTCAGTTACAACAGTCTaGGATCTTTTGGTCCAGAGAGCAGGGAGTTTCAGA +
Preference number: 6 (lower is better)
Translates to: FGSSKIPSVTTV*DLLVQRAGSFR
Trigger: TCTGAAACTCCCTGCTCTCTGGACCAAAAGATCTCAGACTGTTGTAACTGAGGGTATTTTTGAGCTCCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp CACAGATGCCAAAGGGTTTCACCACAGTTTGCATCGTaGCGTTTCTGCATTCCAGAAGTTTACAATCCATCT +
Preference number: 6 (lower is better)
Translates to: HRCQRVSPQFAS*RFCIPEVYNPS
Trigger: AGATGGATTGTAAACTTCTGGAATGCAGAAACGTCACGATGCAAACTGTGGTGAAACCCTTTGGCATCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp CTGTATCTTAGTGGCTATTTGCTTAATGAGGGCTGTTaGTATGGGAACCGCACAATCGGAAGGGTCATATTC +
Preference number: 6 (lower is better)
Translates to: LYLSGYLLNEGC*YGNRTIGRVIF
Trigger: GAATATGACCCTTCCGATTGTGCGGTTCCCATATCAACAGCCCTCATTAAGCAAATAGCCACTAAGATACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp GGCGTGTTATTGATTACTGTAGTCTTATCTTCAATCTaGATGACTTGTATGCCGTGCTGCACCATGGAGGAG +
Preference number: 6 (lower is better)
Translates to: GVLLITVVLSSI*MTCMPCCTMEE
Trigger: CTCCTCCATGGTGCAGCACGGCATACAAGTCATTCAGATTGAAGATAAGACTACAGTAATCAATAACACGCC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp ATCCCAAGCTGCATTATACGGATAAACATAGGTAGCTaGTGGTCTGTGATAGAAAGCTTCAGACTCTCTACC +
Preference number: 6 (lower is better)
Translates to: IPSCIIRINIGS*WSVIESFRLST
Trigger: GGTAGAGAGTCTGAAGCTTTCTATCACAGACCAGCAGCTACCTATGTTTATCCGTATAATGCAGCTTGGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp ACAGGTAATCCATATAAAACGCACCAAACCTCTGTATaGCAGCTATGTCAGTGTGTGTCTCCTTATGGTGAG +
Preference number: 6 (lower is better)
Translates to: TGNPYKTHQTSV*QLCQCVSPYGE
Trigger: CTCACCATAAGGAGACACACACTGACATAGCTGGCATACAGAGGTTTGGTGCGTTTTATATGGATTACCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp ATCTGTCCACAGATGCCAAAGGGTTTCACCACAGTTTaGATCGTGACGTTTCTGCATTCCAGAAGTTTACAA +
Preference number: 6 (lower is better)
Translates to: ICPQMPKGFTTV*IVTFLHSRSLQ
Trigger: TTGTAAACTTCTGGAATGCAGAAACGTCACGATGCAAACTGTGGTGAAACCCTTTGGCATCTGTGGACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp GGTAATTACCACAGGTTCGGAGCCCAATTTTGTCCATaGTACATGAATTCTCAGTTCATGGATATGGCCACT +
Preference number: 6 (lower is better)
Translates to: GNYHRFGAQFCP*YMNSQFMDMAT
Trigger: AGTGGCCATATCCATGAACTGAGAATTCATGTACCATGGACAAAATTGGGCTCCGAACCTGTGGTAATTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp CCAAGCTGCATTATACGGATAAACATAGGTAGCTGCTaGTCTGTGATAGAAAGCTTCAGACTCTCTACCAAG +
Preference number: 6 (lower is better)
Translates to: PSCIIRINIGSC*SVIESFRLSTK
Trigger: CTTGGTAGAGAGTCTGAAGCTTTCTATCACAGACCAGCAGCTACCTATGTTTATCCGTATAATGCAGCTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp CAGTCGCCTTTGTGCAATAAAAGCCTACAGAAACAATaGGATCCTTCAGCGTTTGAGCTTTCTGTTGATGCA +
Preference number: 6 (lower is better)
Translates to: QSPLCNKSLQKQ*DPSAFELSVDA
Trigger: TGCATCAACAGAAAGCTCAAACGCTGAAGGATCCCATTGTTTCTGTAGGCTTTTATTGCACAAAGGCGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp CAAAAATACCCTCAGTTACAACAGTCTGAGATCTTTTaGTCCAGAGAGCAGGGAGTTTCAGAAGCTTCCCAT +
Preference number: 6 (lower is better)
Translates to: QKYPQLQQSEIF*SREQGVSEASH
Trigger: ATGGGAAGCTTCTGAAACTCCCTGCTCTCTGGACCAAAAGATCTCAGACTGTTGTAACTGAGGGTATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp TACTGTTCCAGGGATGTCACCAGACACAATTGTACTTaGGGAAGGCAGGTTGTCATTTGGAATGAATACACA +
Preference number: 6 (lower is better)
Translates to: YCSRDVTRHNCT*GRQVVIWNEYT
Trigger: TGTGTATTCATTCCAAATGACAACCTGCCTTCCCCAAGTACAATTGTGTCTGGTGACATCCCTGGAACAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp ACGATTCTCCACAGATCTGAGGACACCAGTTTCTTCTaGTCATGTACAAGGTTGATATCTGGCAACTGCAAT +
Preference number: 6 (lower is better)
Translates to: TILHRSEDTSFF*SCTRLISGNCN
Trigger: ATTGCAGTTGCCAGATATCAACCTTGTACATGACCAGAAGAAACTGGTGTCCTCAGATCTGTGGAGAATCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp GGTACATCCCATAGGCTCCACAAGGGAAAGAGTCACTaGCTTTCCAAGAAGGGTATATATGCTGAAATGATG +
Preference number: 6 (lower is better)
Translates to: GTSHRLHKGKSH*LSKKGIYAEMM
Trigger: CATCATTTCAGCATATATACCCTTCTTGGAAAGCAAGTGACTCTTTCCCTTGTGGAGCCTATGGGATGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp TTCGCACAGAAAAATCTGTCAAGATGGGTGTCAAAATaGCTCTCCTTTCTTGATGACGCTGTATGCTGCTGG +
Preference number: 6 (lower is better)
Translates to: FAQKNLSRWVSK*LSFLDDAVCCW
Trigger: CCAGCAGCATACAGCGTCATCAAGAAAGGAGAGCAATTTTGACACCCATCTTGACAGATTTTTCTGTGCGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp ATGTCTTCTGTGCTTCATCACAGTGAACTTTGGTCTTaGACAACTTTCCACGGTAACATTTGGGGACAGGAG +
Preference number: 6 (lower is better)
Translates to: MSSVLHHSELWS*TTFHGNIWGQE
Trigger: CTCCTGTCCCCAAATGTTACCGTGGAAAGTTGTCAAAGACCAAAGTTCACTGTGATGAAGCACAGAAGACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp ATGGATATTTTGGGTATGGACTGTTGTGGCCCTGGATaGCCACTGTGTTTACACCATTTAGCTTCCAGATTG +
Preference number: 6 (lower is better)
Translates to: MDILGMDCCGPG*PLCLHHLASRL
Trigger: CAATCTGGAAGCTAAATGGTGTAAACACAGTGGCAATCCAGGGCCACAACAGTCCATACCCAAAATATCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp GGCTGTGAGGCAATCAAAGTGTTCTCGAACTACAGCTaGTCCATCTTGACCAATGTAATGCTGGACAACTTT +
Preference number: 6 (lower is better)
Translates to: GCEAIKVFSNYS*SILTNVMLDNF
Trigger: AAAGTTGTCCAGCATTACATTGGTCAAGATGGACAAGCTGTAGTTCGAGAACACTTTGATTGCCTCACAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp GCTTTGGCACAAATTTTTATGGATCCCAAGGTCCCAGAGGCACATTaGACCAATGATGTGCTGCAGTACTTCAGTTCAACATTCTGGATT +
Preference number: 6 (lower is better)
Translates to: ALAQIFMDPKVPEAH*TNDVLQYFSSTFWI
Trigger: AATCCAGAATGTTGAACTGAAGTACTGCAGCACATCATTGGTCAAATGTGCCTCTGGGACCTTGGGATCCATAAAAATTTGTGCCAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp GATGTAAGAGTTGAACCTGAGCCACACTTAGGAAGAAGTCCAGGTTaGTGGTTATGTTCACTTCCAAGGAATGGCCACACACTAAAATCT +
Preference number: 6 (lower is better)
Translates to: DVRVEPEPHLGRSPG*WLCSLPRNGHTLKS
Trigger: AGATTTTAGTGTGTGGCCATTCCTTGGAAGTGAACATAACCACAAACCTGGACTTCTTCCTAAGTGTGGCTCAGGTTCAACTCTTACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp TGTGGCCCTGGATTGCCACTGTGTTTACACCATTTAGCTTCCAGATaGACAGTAGCAGAAAATGGTCCTATAAGAATCCGACTTCTTTCT +
Preference number: 6 (lower is better)
Translates to: CGPGLPLCLHHLASR*TVAENGPIRIRLLS
Trigger: AGAAAGAAGTCGGATTCTTATAGGACCATTTTCTGCTACTGTCAATCTGGAAGCTAAATGGTGTAAACACAGTGGCAATCCAGGGCCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp CTTAAATCCATGGATATTTTGGGTATGGACTGTTGTGGCCCTGGATaGCCACTGTGTTTACACCATTTAGCTTCCAGATTGACAGTAGCA +
Preference number: 6 (lower is better)
Translates to: LKSMDILGMDCCGPG*PLCLHHLASRLTVA
Trigger: TGCTACTGTCAATCTGGAAGCTAAATGGTGTAAACACAGTGGCAATCCAGGGCCACAACAGTCCATACCCAAAATATCCATGGATTTAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp CTCCACAGATCTGAGGACACCAGTTTCTTCTGGTCATGTACAAGGTaGATATCTGGCAACTGCAATTCACAAACTTTGCTTTCAGACAGA +
Preference number: 6 (lower is better)
Translates to: LHRSEDTSFFWSCTR*ISGNCNSQTLLSDR
Trigger: TCTGTCTGAAAGCAAAGTTTGTGAATTGCAGTTGCCAGATATCAACCTTGTACATGACCAGAAGAAACTGGTGTCCTCAGATCTGTGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp GGCTGTGAGGCAATCAAAGTGTTCTCGAACTACAGCTTGTCCATCTaGACCAATGTAATGCTGGACAACTTTCAGTTCTATACTCTGAGA +
Preference number: 6 (lower is better)
Translates to: GCEAIKVFSNYSLSI*TNVMLDNFQFYTLR
Trigger: TCTCAGAGTATAGAACTGAAAGTTGTCCAGCATTACATTGGTCAAGATGGACAAGCTGTAGTTCGAGAACACTTTGATTGCCTCACAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TTCAGACACATGGCTCTGCAACCTACAAATCCAATCTaGCAATCAAAGAAAGGTTCTCCCATCATAAGAGCC +
Preference number: 6 (lower is better)
Translates to: FRHMALQPTNPI*QSKKGSPIIRA
Trigger: GGCTCTTATGATGGGAGAACCTTTCTTTGATTGTCAGATTGGATTTGTAGGTTGCAGAGCCATGTGTCTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp ACAAACGGAATCTCCTGCAGAGGTTCCATGTACTTGTaGCCAGCACTAATAATCTTTATTTGCGGCAAACAC +
Preference number: 6 (lower is better)
Translates to: TNGISCRGSMYL*PALIIFICGKH
Trigger: GTGTTTGCCGCAAATAAAGATTATTAGTGCTGGTCACAAGTACATGGAACCTCTGCAGGAGATTCCGTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp GTCACTTGCTTTCCAAGAAGGGTATATATGCTGAAATaGTGCAAGCTTATGGTCCAAGGAAATGCATCACCC +
Preference number: 6 (lower is better)
Translates to: VTCFPRRVYMLK*CKLMVQGNASP
Trigger: GGGTGATGCATTTCCTTGGACCATAAGCTTGCATCATTTCAGCATATATACCCTTCTTGGAAAGCAAGTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp AATGTTACTGGTAGTTTGTTCCAAGGTAACAGAGTCTaGGAATGGCGAATCATCACCAGCTTGAACCGAATC +
Preference number: 6 (lower is better)
Translates to: NVTGSLFQGNRV*EWRIITSLNRI
Trigger: GATTCGGTTCAAGCTGGTGATGATTCGCCATTCTCAGACTCTGTTACCTTGGAACAAACTACCAGTAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TTCCTAAGTTTAAGGCTTTCTGGTAAATATCTTTCCTaGGGACAGATCTGCCAAGCGGATTATCAGCCTGAG +
Preference number: 6 (lower is better)
Translates to: FLSLRLSGKYLS*GQICQADYQPE
Trigger: CTCAGGCTGATAATCCGCTTGGCAGATCTGTCCTCAGGAAAGATATTTACCAGAAAGCCTTAAACTTAGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp ACTTTGATGATGAGTGAAGCGGTTCGACCCTTGTACTaGATTGTTCTAATAAATGTACCGGCATGGTCCACA +
Preference number: 6 (lower is better)
Translates to: TLMMSEAVRPLY*IVLINVPAWST
Trigger: TGTGGACCATGCCGGTACATTTATTAGAACAATTCAGTACAAGGGTCGAACCGCTTCACTCATCATCAAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TTCTATCAACAGGGTTCTAACATATGGTTTCCAGATTaGCAGTTTGACTCGCATTGGGCTATCCCACTGACT +
Preference number: 6 (lower is better)
Translates to: FYQQGSNIWFPD*QFDSHWAIPLT
Trigger: AGTCAGTGGGATAGCCCAATGCGAGTCAAACTGTCAATCTGGAAACCATATGTTAGAACCCTGTTGATAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp GTTTCAAAGATTCAGCGTCCTGTACATACTGAAAGATaGCTGTCCGCAGGTCATCTGAACTTTGTTCAGTTT +
Preference number: 6 (lower is better)
Translates to: VSKIQRPVHTER*LSAGHLNFVQF
Trigger: AAACTGAACAAAGTTCAGATGACCTGCGGACAGGCATCTTTCAGTATGTACAGGACGCTGAATCTTTGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp CAAATTTTTATGGATCCCAAGGTCCCAGAGGCACATTaGACCAATGATGTGCTGCAGTACTTCAGTTCAACA +
Preference number: 6 (lower is better)
Translates to: QIFMDPKVPEAH*TNDVLQYFSST
Trigger: TGTTGAACTGAAGTACTGCAGCACATCATTGGTCAAATGTGCCTCTGGGACCTTGGGATCCATAAAAATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp CTGCTGTTGTGCATGTCTATTTGCTCGTTTCTGTGGTaGGTAGATGACCCAAGTATACAGTATTGGGTCAAT +
Preference number: 6 (lower is better)
Translates to: LLLCMSICSFLW*VDDPSIQYWVN
Trigger: ATTGACCCAATACTGTATACTTGGGTCATCTACCAACCACAGAAACGAGCAAATAGACATGCACAACAGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp ATGTCACCAGACACAATTGTACTTGGGGAAGGCAGGTaGTCATTTGGAATGAATACACAGCAAGACTGTACA +
Preference number: 6 (lower is better)
Translates to: MSPDTIVLGEGR*SFGMNTQQDCT
Trigger: TGTACAGTCTTGCTGTGTATTCATTCCAAATGACAACCTGCCTTCCCCAAGTACAATTGTGTCTGGTGACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp TTCCATGTACTTGTGACCAGCACTAATAATCTTTATTaGCGGCAAACACAGGACAAGTGTCCCTGGTATGCT +
Preference number: 6 (lower is better)
Translates to: FHVLVTSTNNLY*RQTQDKCPWYA
Trigger: AGCATACCAGGGACACTTGTCCTGTGTTTGCCGCAAATAAAGATTATTAGTGCTGGTCACAAGTACATGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp GGTACTTTTTGTGCTGCTTTGACAGTAAGGCTTCCATaGAGGTTTGACAGTGATGCTAACACACATGGCTTA +
Preference number: 6 (lower is better)
Translates to: GTFCAALTVRLP*RFDSDANTHGL
Trigger: TAAGCCATGTGTGTTAGCATCACTGTCAAACCTCAATGGAAGCCTTACTGTCAAAGCAGCACAAAAAGTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp CTTCTGTTTGGCTGTGAGGCAATCAAAGTGTTCTCGAACTACAGCTaGTCCATCTTGACCAATGTAATGCTGGACAACTTTCAGTTCTAT +
Preference number: 6 (lower is better)
Translates to: LLFGCEAIKVFSNYS*SILTNVMLDNFQFY
Trigger: ATAGAACTGAAAGTTGTCCAGCATTACATTGGTCAAGATGGACAAGCTGTAGTTCGAGAACACTTTGATTGCCTCACAGCCAAACAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp TCTGTCAGTTCGTTGTTTTCTAATATGTACGAAGGCAACTTCTGTTaGGCTGTGAGGCAATCAAAGTGTTCTCGAACTACAGCTTGTCCA +
Preference number: 6 (lower is better)
Translates to: SVSSLFSNMYEGNFC*AVRQSKCSRTTACP
Trigger: TGGACAAGCTGTAGTTCGAGAACACTTTGATTGCCTCACAGCCAAACAGAAGTTGCCTTCGTACATATTAGAAAACAACGAACTGACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp AAATTTTTATGGATCCCAAGGTCCCAGAGGCACATTTaGCCAATGATGTGCTGCAGTACTTCAGTTCAACAT +
Preference number: 6 (lower is better)
Translates to: KFLWIPRSQRHI*PMMCCSTSVQH
Trigger: ATGTTGAACTGAAGTACTGCAGCACATCATTGGTCAAATGTGCCTCTGGGACCTTGGGATCCATAAAAATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp CTGAGGACACCAGTTTCTTCTGGTCATGTACAAGGTTaGTATCTGGCAACTGCAATTCACAAACTTTGCTTT +
Preference number: 6 (lower is better)
Translates to: LRTPVSSGHVQG*YLATAIHKLCF
Trigger: AAAGCAAAGTTTGTGAATTGCAGTTGCCAGATATCAACCTTGTACATGACCAGAAGAAACTGGTGTCCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp TTTCTAATATGTACGAAGGCAACTTCTGTTTGGCTGTaGGGCAATCAAAGTGTTCTCGAACTACAGCTTGTC +
Preference number: 6 (lower is better)
Translates to: FLICTKATSVWL*GNQSVLELQLV
Trigger: GACAAGCTGTAGTTCGAGAACACTTTGATTGCCTCACAGCCAAACAGAAGTTGCCTTCGTACATATTAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp CAAAACTGTGCACCACACATAAATAATGGAACTGTTTaGAGTAGGCACCTGGATGACAGTGCTATACTCAGA +
Preference number: 6 (lower is better)
Translates to: QNCAPHINNGTV*SRHLDDSAILR
Trigger: TCTGAGTATAGCACTGTCATCCAGGTGCCTACTTCAAACAGTTCCATTATTTATGTGTGGTGCACAGTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp ACTGTGCAAGTGCACTTAAGCAAAGTAACACTTGTATaGCGAGTAGGGATATATTCCTCCAAAGAAGACACT +
Preference number: 6 (lower is better)
Translates to: TVQVHLSKVTLV*RVGIYSSKEDT
Trigger: AGTGTCTTCTTTGGAGGAATATATCCCTACTCGGCATACAAGTGTTACTTTGCTTAAGTGCACTTGCACAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp CCAACTCTGATATATTGCTTGCAACAAAAGTGTCTGTaGTCTTGTAGCTTGAATTGTGAGATTTGGGAGCTC +
Preference number: 6 (lower is better)
Translates to: PTLIYCLQQKCL*SCSLNCEIWEL
Trigger: GAGCTCCCAAATCTCACAATTCAAGCTACAAGAGCACAGACACTTTTGTTGCAAGCAATATATCAGAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp TTTCTGTGGTTGGTAGATGACCCAAGTATACAGTATTaGGTCAATGTTAACAGCGAGTCCTTGTACACTACA +
Preference number: 6 (lower is better)
Translates to: FLWLVDDPSIQY*VNVNSESLYTT
Trigger: TGTAGTGTACAAGGACTCGCTGTTAACATTGACCCAATACTGTATACTTGGGTCATCTACCAACCACAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp TTTATGGATGATTTTGTGTTCTCAGCAGTGCTACGGTaGGTAGAATTAGAACCACAGCTTTCATGGTCATCC +
Preference number: 6 (lower is better)
Translates to: FMDDFVFSAVLR*VELEPQLSWSS
Trigger: GGATGACCATGAAAGCTGTGGTTCTAATTCTACCAACCGTAGCACTGCTGAGAACACAAAATCATCCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp GGATTGCCACTGTGTTTACACCATTTAGCTTCCAGATaGACAGTAGCAGAAAATGGTCCTATAAGAATCCGA +
Preference number: 6 (lower is better)
Translates to: GLPLCLHHLASR*TVAENGPIRIR
Trigger: TCGGATTCTTATAGGACCATTTTCTGCTACTGTCAATCTGGAAGCTAAATGGTGTAAACACAGTGGCAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp ATTGATTACTGTAGTCTTATCTTCAATCTGAATGACTaGTATGCCGTGCTGCACCATGGAGGAGATGCAGAA +
Preference number: 6 (lower is better)
Translates to: IDYCSLIFNLND*YAVLHHGGDAE
Trigger: TTCTGCATCTCCTCCATGGTGCAGCACGGCATACAAGTCATTCAGATTGAAGATAAGACTACAGTAATCAAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp CCACTAGCATTTCGTTTATCGAGACAAACTGTACAGTCAGAAAAATaGATAGCCTTCCTCAGCACCAGATCAGTTGCAGAAATATCCATG +
Preference number: 6 (lower is better)
Translates to: PLAFRLSRQTVQSEK*IAFLSTRSVAEISM
Trigger: CATGGATATTTCTGCAACTGATCTGGTGCTGAGGAAGGCTATCAATTTTTCTGACTGTACAGTTTGTCTCGATAAACGAAATGCTAGTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp AGCTTCTTCGCTCATTTCTTGAGGTTAACTTGTGGCGGACATTTTTaGTTACAGCTTTGGTGTATGTCAGAGAAAGAAATCCATGCTGCT +
Preference number: 6 (lower is better)
Translates to: SFFAHFLRLTCGGHF*LQLWCMSEKEIHAA
Trigger: AGCAGCATGGATTTCTTTCTCTGACATACACCAAAGCTGTAACAAAAAATGTCCGCCACAAGTTAACCTCAAGAAATGAGCGAAGAAGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp TTGGAGTTACAAGTGGTTCACAAGTGCTTTGAGAACCGGATTCACTaGCAGAACTTTGGTCATCTGTCGTATTTTGATTGTTGTTTAGGA +
Preference number: 6 (lower is better)
Translates to: LELQVVHKCFENRIH*QNFGHLSYFDCCLG
Trigger: TCCTAAACAACAATCAAAATACGACAGATGACCAAAGTTCTGCAAGTGAATCCGGTTCTCAAAGCACTTGTGAACCACTTGTAACTCCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp CTGGCATTTCAGACTTTCCCTCCTGAAGATACCCATTaGATAATTCATGCAGAAGAGCCAAGCAATTCAAAT +
Preference number: 6 (lower is better)
Translates to: LAFQTFPPEDTH*IIHAEEPSNSN
Trigger: ATTTGAATTGCTTGGCTCTTCTGCATGAATTATTCAATGGGTATCTTCAGGAGGGAAAGTCTGAAATGCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp GATTCACTTGCAGAACTTTGGTCATCTGTCGTATTTTaGTTGTTGTTTAGGACGATTCTCCACAGATCTGAG +
Preference number: 6 (lower is better)
Translates to: DSLAELWSSVVF*LLFRTILHRSE
Trigger: CTCAGATCTGTGGAGAATCGTCCTAAACAACAATCAAAATACGACAGATGACCAAAGTTCTGCAAGTGAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS GCA 72 bp AAGTGGTTCACAAGTGCTTTGAGAACCGGATTCACTTaGAGAACTTTGGTCATCTGTCGTATTTTGATTGTT +
Preference number: 6 (lower is better)
Translates to: KWFTSALRTGFT*RTLVICRILIV
Trigger: AACAATCAAAATACGACAGATGACCAAAGTTCTGCAAGTGAATCCGGTTCTCAAAGCACTTGTGAACCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp CTCCTTTCCAGAATAGGAGTTAGAGATGGCCAAGTGTaGCTTATAAACTATCTGATATGGCGTGTTATTGAT +
Preference number: 6 (lower is better)
Translates to: LLSRIGVRDGQV*LINYLIWRVID
Trigger: ATCAATAACACGCCATATCAGATAGTTTATAAGCCACACTTGGCCATCTCTAACTCCTATTCTGGAAAGGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp TATTGCTTGCAACAAAAGTGTCTGTGCTCTTGTAGCTaGAATTGTGAGATTTGGGAGCTCAAAAATACCCTC +
Preference number: 6 (lower is better)
Translates to: YCLQQKCLCSCS*NCEIWELKNTL
Trigger: GAGGGTATTTTTGAGCTCCCAAATCTCACAATTCAAGCTACAAGAGCACAGACACTTTTGTTGCAAGCAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp GCAATCAAAGTGTTCTCGAACTACAGCTTGTCCATCTaGACCAATGTAATGCTGGACAACTTTCAGTTCTAT +
Preference number: 6 (lower is better)
Translates to: AIKVFSNYSLSI*TNVMLDNFQFY
Trigger: ATAGAACTGAAAGTTGTCCAGCATTACATTGGTCAAGATGGACAAGCTGTAGTTCGAGAACACTTTGATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp ACTCTGATATATTGCTTGCAACAAAAGTGTCTGTGCTCTTGTAGCTaGAATTGTGAGATTTGGGAGCTCAAAAATACCCTCAGTTACAAC +
Preference number: 6 (lower is better)
Translates to: TLIYCLQQKCLCSCS*NCEIWELKNTLSYN
Trigger: GTTGTAACTGAGGGTATTTTTGAGCTCCCAAATCTCACAATTCAAGCTACAAGAGCACAGACACTTTTGTTGCAAGCAATATATCAGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp TTGACAGTAGCAGAAAATGGTCCTATAAGAATCCGACTTCTTTCTTaGAGGCTTGTTTTAAGGAGAACATCATGTATGCTGAGGAGGAAT +
Preference number: 6 (lower is better)
Translates to: LTVAENGPIRIRLLS*RLVLRRTSCMLRRN
Trigger: ATTCCTCCTCAGCATACATGATGTTCTCCTTAAAACAAGCCTCAAAGAAAGAAGTCGGATTCTTATAGGACCATTTTCTGCTACTGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp TGGCAACTGCAATTCACAAACTTTGCTTTCAGACAGACTGAATTCTaGAAACGCAACAAAAACCTTCTGGAGTTCATCCCAATATTCCAA +
Preference number: 6 (lower is better)
Translates to: WQLQFTNFAFRQTEF*KRNKNLLEFIPIFQ
Trigger: TTGGAATATTGGGATGAACTCCAGAAGGTTTTTGTTGCGTTTCAAGAATTCAGTCTGTCTGAAAGCAAAGTTTGTGAATTGCAGTTGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp AAAGAGTCACTTGCTTTCCAAGAAGGGTATATATGCTaGAATGATGCAAGCTTATGGTCCAAGGAAATGCAT +
Preference number: 6 (lower is better)
Translates to: KESLAFQEGYIC*NDASLWSKEMH
Trigger: ATGCATTTCCTTGGACCATAAGCTTGCATCATTTCAGCATATATACCCTTCTTGGAAAGCAAGTGACTCTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp GCAGAAAATGGTCCTATAAGAATCCGACTTCTTTCTTaGAGGCTTGTTTTAAGGAGAACATCATGTATGCTG +
Preference number: 6 (lower is better)
Translates to: AENGPIRIRLLS*RLVLRRTSCML
Trigger: CAGCATACATGATGTTCTCCTTAAAACAAGCCTCAAAGAAAGAAGTCGGATTCTTATAGGACCATTTTCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 90 bp GAGTTCTTTCCTCCCATGATGACAGGAAGCAAACAATCAAGTAAATaGAATTCTGCCATAAAAACTGTGCAAGTGCACTTAAGCAAAGTA +
Preference number: 6 (lower is better)
Translates to: EFFPPMMTGSKQSSK*NSAIKTVQVHLSKV
Trigger: TACTTTGCTTAAGTGCACTTGCACAGTTTTTATGGCAGAATTCAATTTACTTGATTGTTTGCTTCCTGTCATCATGGGAGGAAAGAACTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CAA 72 bp GACATTTCCAATATGAGACCAACTCTGATATATTGCTaGCAACAAAAGTGTCTGTGCTCTTGTAGCTTGAAT +
Preference number: 6 (lower is better)
Translates to: DISNMRPTLIYC*QQKCLCSCSLN
Trigger: ATTCAAGCTACAAGAGCACAGACACTTTTGTTGCAAGCAATATATCAGAGTTGGTCTCATATTGGAAATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS TCA 72 bp GGTACCATTGTTTTCTGGACTCCGGTAATCAAACAATaGATTTGTAAGGTATGTCAAACCTTTTGTACTCAA +
Preference number: 6 (lower is better)
Translates to: GTIVFWTPVIKQ*ICKVCQTFCTQ
Trigger: TTGAGTACAAAAGGTTTGACATACCTTACAAATTCATTGTTTGATTACCGGAGTCCAGAAAACAATGGTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9
CDS CCA 72 bp AGAGATGGCCAAGTGTGGCTTATAAACTATCTGATATaGCGTGTTATTGATTACTGTAGTCTTATCTTCAAT +
Preference number: 6 (lower is better)
Translates to: RDGQVWLINYLI*RVIDYCSLIFN
Trigger: ATTGAAGATAAGACTACAGTAATCAATAACACGCCATATCAGATAGTTTATAAGCCACACTTGGCCATCTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000048646.9