RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VPS11 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032127

Ensembl transcript IDs: ENSMUST00000034644.10, ENSMUST00000213249.2, ENSMUST00000213740.2, ENSMUST00000214460.2, ENSMUST00000214510.2

Found 331 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCGCCACATACTCCTTGCAGTCCTCCTCCTTGCGGGCGAAGTAGCTaGGGGCCTGTTCCCACAGGGAGGGCTCCTGCTCTCCATGGCGCT +
Preference number: 1 (lower is better)
Translates to: PPHTPCSPPPCGRSS*GPVPTGRAPALHGA
Trigger: AGCGCCATGGAGAGCAGGAGCCCTCCCTGTGGGAACAGGCCCTCAGCTACTTCGCCCGCAAGGAGGAGGACTGCAAGGAGTATGTGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR GCA 90 bp CATGGGCCCAGTTCTGCAGCCGCAGCTCCAGGAGCGTGTCATAGATaGCCTGCGGTGAGTCCGGCTGCACCTCACTCATGTGTTCTAGGA +
Preference number: 1 (lower is better)
Translates to: HGPSSAAAAPGACHR*PAVSPAAPHSCVLG
Trigger: TCCTAGAACACATGAGTGAGGTGCAGCCGGACTCACCGCAGGGCATCTATGACACGCTCCTGGAGCTGCGGCTGCAGAACTGGGCCCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 90 bp TCACCCGGCAGCTCAGAGCCTCCCGATCGCCTCGGCCTTCCAGACTaGGTCGATAGTCAGTGCAGAGGCCTTTCAGCAACTGGGTTGTCT +
Preference number: 1 (lower is better)
Translates to: SPGSSEPPDRLGLPD*VDSQCRGLSATGLS
Trigger: AGACAACCCAGTTGCTGAAAGGCCTCTGCACTGACTATCGACCCAGTCTGGAAGGCCGAGGCGATCGGGAGGCTCTGAGCTGCCGGGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 90 bp AGGGATATAGGCTTCCCCAGGAGCTGCCTAACTAAGTTCCCCTCCTaGAGTGCATCAGCAGGTCCCGCTGCAGTCCAGCCTCCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: RDIGFPRSCLTKFPS*SASAGPAAVQPPGW
Trigger: CCAGCCTGGAGGCTGGACTGCAGCGGGACCTGCTGATGCACTCCAGGAGGGGAACTTAGTTAGGCAGCTCCTGGGGAAGCCTATATCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR GCA 90 bp GAGCCTCCCGATCGCCTCGGCCTTCCAGACTGGGTCGATAGTCAGTaGAGAGGCCTTTCAGCAACTGGGTTGTCTGCTCCGGTATGTGGT +
Preference number: 1 (lower is better)
Translates to: EPPDRLGLPDWVDSQ*RGLSATGLSAPVCG
Trigger: ACCACATACCGGAGCAGACAACCCAGTTGCTGAAAGGCCTCTGCACTGACTATCGACCCAGTCTGGAAGGCCGAGGCGATCGGGAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR TCA 90 bp CCCAGCAACAATGAACTGCAGGTCTTGAGAAGGGTCGCTCAGGGCTaGACAGCGCAGGCCACAACCATGGGTGTCCAACTCCACACGAGG +
Preference number: 1 (lower is better)
Translates to: PSNNELQVLRRVAQG*TAQATTMGVQLHTR
Trigger: CCTCGTGTGGAGTTGGACACCCATGGTTGTGGCCTGCGCTGTTCAGCCCTGAGCGACCCTTCTCAAGACCTGCAGTTCATTGTTGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR GCA 90 bp ACGTCTGTGCTTCAGAGGCCCAGGGATATAGGCTTCCCCAGGAGCTaGCTAACTAAGTTCCCCTCCTGGAGTGCATCAGCAGGTCCCGCT +
Preference number: 1 (lower is better)
Translates to: TSVLQRPRDIGFPRS*LTKFPSWSASAGPA
Trigger: AGCGGGACCTGCTGATGCACTCCAGGAGGGGAACTTAGTTAGGCAGCTCCTGGGGAAGCCTATATCCCTGGGCCTCTGAAGCACAGACGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 90 bp AACTCCTCAGAACTGGCCTGGGACAGAGGGGAGAAGCAAGCATGGTaGCTAAGGAAGGTGGCTCAGCGCTCACAGGCCTCTAAGGTGACC +
Preference number: 1 (lower is better)
Translates to: NSSELAWDRGEKQAW*LRKVAQRSQASKVT
Trigger: GGTCACCTTAGAGGCCTGTGAGCGCTGAGCCACCTTCCTTAGCCACCATGCTTGCTTCTCCCCTCTGTCCCAGGCCAGTTCTGAGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 90 bp AACAGCATCTCCAGTTTGGTCTGTGTGTCCTTCTCCTGCAATGCGTaGACCCGCCCATCCCGCGTCAGCACGTACAAGGAGCCCCACTCA +
Preference number: 1 (lower is better)
Translates to: NSISSLVCVSFSCNA*TRPSRVSTYKEPHS
Trigger: TGAGTGGGGCTCCTTGTACGTGCTGACGCGGGATGGGCGGGTCCACGCATTGCAGGAGAAGGACACACAGACCAAACTGGAGATGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR GCA 90 bp CTTAAACAGCATCTCCAGTTTGGTCTGTGTGTCCTTCTCCTGCAATaGGTGGACCCGCCCATCCCGCGTCAGCACGTACAAGGAGCCCCA +
Preference number: 1 (lower is better)
Translates to: LKQHLQFGLCVLLLQ*VDPPIPRQHVQGAP
Trigger: TGGGGCTCCTTGTACGTGCTGACGCGGGATGGGCGGGTCCACGCATTGCAGGAGAAGGACACACAGACCAAACTGGAGATGCTGTTTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR CCA 90 bp GTCTTCTGGAAAATCTTTGGACTCGCCTTGAGCTCCTGGATTTCCTaGCGGATGCGAGTGGTCTCCTCTCTGTATCGCCGCACCCGGAGC +
Preference number: 1 (lower is better)
Translates to: VFWKIFGLALSSWIS*RMRVVSSLYRRTRS
Trigger: GCTCCGGGTGCGGCGATACAGAGAGGAGACCACTCGCATCCGCCAGGAAATCCAGGAGCTCAAGGCGAGTCCAAAGATTTTCCAGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR GCA 90 bp GAGACTGCCGATGCAGGGTTTGCAGGTAGGCGGTCAAGTTGTGGATaGGCTGGGCATCCAGAAACTTCCGGATCACATAGGATGGCTCCA +
Preference number: 1 (lower is better)
Translates to: ETADAGFAGRRSSCG*AGHPETSGSHRMAP
Trigger: TGGAGCCATCCTATGTGATCCGGAAGTTTCTGGATGCCCAGCGCATCCACAACTTGACCGCCTACCTGCAAACCCTGCATCGGCAGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR GCA 90 bp GTCTGCACCACTAGAAGAGGCGGCATGAGGCTCTTGTTCTCAATGTaGCTGAGCACAGCCGCCACATACTCCTTGCAGTCCTCCTCCTTG +
Preference number: 1 (lower is better)
Translates to: VCTTRRGGMRLLFSM*LSTAATYSLQSSSL
Trigger: CAAGGAGGAGGACTGCAAGGAGTATGTGGCGGCTGTGCTCAGGCACATTGAGAACAAGAGCCTCATGCCGCCTCTTCTAGTGGTGCAGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 90 bp CGTGGGTTGTTGGCAAAGATGGGGATGAACTCCTCAGAACTGGCCTaGGACAGAGGGGAGAAGCAAGCATGGTGGCTAAGGAAGGTGGCT +
Preference number: 1 (lower is better)
Translates to: RGLLAKMGMNSSELA*DRGEKQAWWLRKVA
Trigger: AGCCACCTTCCTTAGCCACCATGCTTGCTTCTCCCCTCTGTCCCAGGCCAGTTCTGAGGAGTTCATCCCCATCTTTGCCAACAACCCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR TCA 90 bp AGCAGGCTGGCAAAAGGAGGAGGCAGGAAAAGCAGAGTCCCTTCTTaGGTCCTGAGGCTCCGGAACTGTGGTCATGTCTGCTACCATCTC +
Preference number: 1 (lower is better)
Translates to: SRLAKGGGRKSRVPS*VLRLRNCGHVCYHL
Trigger: GAGATGGTAGCAGACATGACCACAGTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCTTTTCCTGCCTCCTCCTTTTGCCAGCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
3UTR GCA 90 bp TCTCGGATGATAGACAGGGTAGCTGTGGAGTTGTGGGCCAGGGTCTaGACCACTAGAAGAGGCGGCATGAGGCTCTTGTTCTCAATGTGC +
Preference number: 1 (lower is better)
Translates to: SRMIDRVAVELWARV*TTRRGGMRLLFSMC
Trigger: GCACATTGAGAACAAGAGCCTCATGCCGCCTCTTCTAGTGGTGCAGACCCTGGCCCACAACTCCACAGCTACCCTGTCTATCATCCGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR GCA 90 bp GCGAGTGGTCTCCTCTCTGTATCGCCGCACCCGGAGCTCATCCTGTaGAATCTGCTGGCTCTGTTTCTGCAGTTTTTGGACCAGGTAATC +
Preference number: 1 (lower is better)
Translates to: ASGLLSVSPHPELIL*NLLALFLQFLDQVI
Trigger: GATTACCTGGTCCAAAAACTGCAGAAACAGAGCCAGCAGATTGCACAGGATGAGCTCCGGGTGCGGCGATACAGAGAGGAGACCACTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 90 bp CATGGACCGTCAAACAAGACACAACAGTTGGCTCTGTCCCTGGGATaGCAGGGAAAATCCGGGTGCAGAGTGGATTGCCACCGTCTCTCT +
Preference number: 1 (lower is better)
Translates to: HGPSNKTQQLALSLG*QGKSGCRVDCHRLS
Trigger: AGAGAGACGGTGGCAATCCACTCTGCACCCGGATTTTCCCTGCCATCCCAGGGACAGAGCCAACTGTTGTGTCTTGTTTGACGGTCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR TCA 90 bp CTAGGAAGGCTTTCAGCTCTCGTGGGTTGTTGGCAAAGATGGGGATaGACTCCTCAGAACTGGCCTGGGACAGAGGGGAGAAGCAAGCAT +
Preference number: 1 (lower is better)
Translates to: LGRLSALVGCWQRWG*TPQNWPGTEGRSKH
Trigger: ATGCTTGCTTCTCCCCTCTGTCCCAGGCCAGTTCTGAGGAGTTCATCCCCATCTTTGCCAACAACCCACGAGAGCTGAAAGCCTTCCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR GCA 90 bp AAACACGTCACAGAATCGGCCACTCTTCAGCAGGGAGATGGCCTCTaGATGAAGTTTCTCCTTGGCCTGGGGATCTTTCTCATGGGCCCA +
Preference number: 1 (lower is better)
Translates to: KHVTESATLQQGDGL*MKFLLGLGIFLMGP
Trigger: TGGGCCCATGAGAAAGATCCCCAGGCCAAGGAGAAACTTCATGCAGAGGCCATCTCCCTGCTGAAGAGTGGCCGATTCTGTGACGTGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR GCA 90 bp ACACAACAGTTGGCTCTGTCCCTGGGATGGCAGGGAAAATCCGGGTaGAGAGTGGATTGCCACCGTCTCTCTTTTCCAGGTTCCAGATCT +
Preference number: 1 (lower is better)
Translates to: TQQLALSLGWQGKSG*RVDCHRLSFPGSRS
Trigger: AGATCTGGAACCTGGAAAAGAGAGACGGTGGCAATCCACTCTGCACCCGGATTTTCCCTGCCATCCCAGGGACAGAGCCAACTGTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR GCA 90 bp TTCTTCTTAAACAGCATCTCCAGTTTGGTCTGTGTGTCCTTCTCCTaGAATGCGTGGACCCGCCCATCCCGCGTCAGCACGTACAAGGAG +
Preference number: 1 (lower is better)
Translates to: FFLNSISSLVCVSFS*NAWTRPSRVSTYKE
Trigger: CTCCTTGTACGTGCTGACGCGGGATGGGCGGGTCCACGCATTGCAGGAGAAGGACACACAGACCAAACTGGAGATGCTGTTTAAGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR CCA 90 bp CAGGAAAAGCAGAGTCCCTTCTTGAGTCCTGAGGCTCCGGAACTGTaGTCATGTCTGCTACCATCTCTTCCTCAGGCCTACGTCTGTGCT +
Preference number: 1 (lower is better)
Translates to: QEKQSPFLSPEAPEL*SCLLPSLPQAYVCA
Trigger: AGCACAGACGTAGGCCTGAGGAAGAGATGGTAGCAGACATGACCACAGTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCTTTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
3UTR CCA 90 bp AGTTGGCTCTGTCCCTGGGATGGCAGGGAAAATCCGGGTGCAGAGTaGATTGCCACCGTCTCTCTTTTCCAGGTTCCAGATCTTTACCAG +
Preference number: 1 (lower is better)
Translates to: SWLCPWDGRENPGAE*IATVSLFQVPDLYQ
Trigger: CTGGTAAAGATCTGGAACCTGGAAAAGAGAGACGGTGGCAATCCACTCTGCACCCGGATTTTCCCTGCCATCCCAGGGACAGAGCCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR CCA 90 bp ATTCTCATGGACCGTCAAACAAGACACAACAGTTGGCTCTGTCCCTaGGATGGCAGGGAAAATCCGGGTGCAGAGTGGATTGCCACCGTC +
Preference number: 1 (lower is better)
Translates to: ILMDRQTRHNSWLCP*DGRENPGAEWIATV
Trigger: GACGGTGGCAATCCACTCTGCACCCGGATTTTCCCTGCCATCCCAGGGACAGAGCCAACTGTTGTGTCTTGTTTGACGGTCCATGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR TCA 90 bp TGGCAAAAGGAGGAGGCAGGAAAAGCAGAGTCCCTTCTTGAGTCCTaGGGCTCCGGAACTGTGGTCATGTCTGCTACCATCTCTTCCTCA +
Preference number: 1 (lower is better)
Translates to: WQKEEAGKAESLLES*GSGTVVMSATISSS
Trigger: TGAGGAAGAGATGGTAGCAGACATGACCACAGTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCTTTTCCTGCCTCCTCCTTTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
3UTR TCA 90 bp CTCAAAGCAGTGTTGGTGGAAGGAGTGGCCACACAGGAAGTGGACTaGGGGCAGCTCCAAGGCACTGTTACAGATGCTACACTTGGTCTT +
Preference number: 1 (lower is better)
Translates to: LKAVLVEGVATQEVD*GQLQGTVTDATLGL
Trigger: AAGACCAAGTGTAGCATCTGTAACAGTGCCTTGGAGCTGCCCTCAGTCCACTTCCTGTGTGGCCACTCCTTCCACCAACACTGCTTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR TCA 90 bp GTTCATCAGGCTGGTAAAGGTAGACACACTCATCCCCAGCAACAATaGACTGCAGGTCTTGAGAAGGGTCGCTCAGGGCTGAACAGCGCA +
Preference number: 1 (lower is better)
Translates to: VHQAGKGRHTHPQQQ*TAGLEKGRSGLNSA
Trigger: TGCGCTGTTCAGCCCTGAGCGACCCTTCTCAAGACCTGCAGTTCATTGTTGCTGGGGATGAGTGTGTCTACCTTTACCAGCCTGATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR TCA 90 bp CTGCCTCTGCCTCTGCGTCCCAAGTACTATACCAGGCCTTGTGTGTaGAGACAGACTCACTGTGTAGTACACAACCCTGCTTCAGTCCTG +
Preference number: 1 (lower is better)
Translates to: LPLPLRPKYYTRPCV*RQTHCVVHNPASVL
Trigger: CAGGACTGAAGCAGGGTTGTGTACTACACAGTGAGTCTGTCTTCACACACAAGGCCTGGTATAGTACTTGGGACGCAGAGGCAGAGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR GCA 90 bp GTAAAGGACCCCATCCTGGAAGTCGTGCATCTGGCACAGAACCAATaGCTTGTCAAACACGTCACAGAATCGGCCACTCTTCAGCAGGGA +
Preference number: 1 (lower is better)
Translates to: VKDPILEVVHLAQNQ*LVKHVTESATLQQG
Trigger: TCCCTGCTGAAGAGTGGCCGATTCTGTGACGTGTTTGACAAGGCATTGGTTCTGTGCCAGATGCACGACTTCCAGGATGGGGTCCTTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR GCA 90 bp TGCCCTCCCCTCTGGCATGAGTTTCAGCAGTCTAGCTGTCTGTTCTaGATCCAGAGCTACATCCCAGAGCATACCCAGACTAACCGGATA +
Preference number: 1 (lower is better)
Translates to: CPPLWHEFQQSSCLF*IQSYIPEHTQTNRI
Trigger: TATCCGGTTAGTCTGGGTATGCTCTGGGATGTAGCTCTGGATGCAGAACAGACAGCTAGACTGCTGAAACTCATGCCAGAGGGGAGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR CCA 90 bp GTTGTGGATGCGCTGGGCATCCAGAAACTTCCGGATCACATAGGATaGCTCCAACTTTCCAATGGTTCGGATATACTGCTGCACAGCCCC +
Preference number: 1 (lower is better)
Translates to: VVDALGIQKLPDHIG*LQLSNGSDILLHSP
Trigger: GGGGCTGTGCAGCAGTATATCCGAACCATTGGAAAGTTGGAGCCATCCTATGTGATCCGGAAGTTTCTGGATGCCCAGCGCATCCACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 90 bp CCTTGTCAAACACGTCACAGAATCGGCCACTCTTCAGCAGGGAGATaGCCTCTGCATGAAGTTTCTCCTTGGCCTGGGGATCTTTCTCAT +
Preference number: 1 (lower is better)
Translates to: PCQTRHRIGHSSAGR*PLHEVSPWPGDLSH
Trigger: ATGAGAAAGATCCCCAGGCCAAGGAGAAACTTCATGCAGAGGCCATCTCCCTGCTGAAGAGTGGCCGATTCTGTGACGTGTTTGACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR GCA 90 bp CTGAACATTTTCAGTTGTCACGACAAACAAGTGGGTGGTCTTTCCTaGTTGGCGAAAGGCCAGCCCAGTAACGGGATAGTTGCCCTTGTG +
Preference number: 1 (lower is better)
Translates to: LNIFSCHDKQVGGLS*LAKGQPSNGIVALV
Trigger: CACAAGGGCAACTATCCCGTTACTGGGCTGGCCTTTCGCCAAGCAGGAAAGACCACCCACTTGTTTGTCGTGACAACTGAAAATGTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR CCA 90 bp CATAAAGTTGAGATTCTCATGGACCGTCAAACAAGACACAACAGTTaGCTCTGTCCCTGGGATGGCAGGGAAAATCCGGGTGCAGAGTGG +
Preference number: 1 (lower is better)
Translates to: HKVEILMDRQTRHNS*LCPWDGRENPGAEW
Trigger: CCACTCTGCACCCGGATTTTCCCTGCCATCCCAGGGACAGAGCCAACTGTTGTGTCTTGTTTGACGGTCCATGAGAATCTCAACTTTATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR TCA 90 bp GTTGCACAGGTCATAGATGTTGAGAATCTGCTTGTCGGAGTTCTGTaGGTCCCTGCTGGTAAACTCGGACTTGGGAGAAACTTTCCGGTC +
Preference number: 1 (lower is better)
Translates to: VAQVIDVENLLVGVL*VPAGKLGLGRNFPV
Trigger: GACCGGAAAGTTTCTCCCAAGTCCGAGTTTACCAGCAGGGACTCACAGAACTCCGACAAGCAGATTCTCAACATCTATGACCTGTGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR GCA 90 bp AGGAAAAGTGAACTCTTCCTGATGAAATACAACACCCTCCACTTCTaGCCTCCCCTCTGGCATGAGTTTCAGCAGTCTAGCTGTCTGTTC +
Preference number: 1 (lower is better)
Translates to: RKSELFLMKYNTLHF*PPLWHEFQQSSCLF
Trigger: GAACAGACAGCTAGACTGCTGAAACTCATGCCAGAGGGGAGGGCAGAAGTGGAGGGTGTTGTATTTCATCAGGAAGAGTTCACTTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR CCA 90 bp ACACTGCCATCTGTGAACCCAATGGCCATAAAGTTGAGATTCTCATaGACCGTCAAACAAGACACAACAGTTGGCTCTGTCCCTGGGATG +
Preference number: 1 (lower is better)
Translates to: TLPSVNPMAIKLRFS*TVKQDTTVGSVPGM
Trigger: CATCCCAGGGACAGAGCCAACTGTTGTGTCTTGTTTGACGGTCCATGAGAATCTCAACTTTATGGCCATTGGGTTCACAGATGGCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR CCA 90 bp AGTCTTTTTCAGTCCTCATACTATTATACTTTTATTTATAGGCTCTaGGAGCAAGGACCCAAGCACAGCCTGGTGCCCTTGAGTAGAGAA +
Preference number: 1 (lower is better)
Translates to: SLFQSSYYYTFIYRL*EQGPKHSLVPLSRE
Trigger: TTCTCTACTCAAGGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATAATAGTATGAGGACTGAAAAAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
3UTR-3UTR TCA 90 bp AAGTTCCCCTCCTGGAGTGCATCAGCAGGTCCCGCTGCAGTCCAGCCTCCAGGCTGCGGGCGAAGTAGCTaGGGGCCTGTTCCCACAGGG +
Preference number: 2 (lower is better)
Translates to: KFPSWSASAGPAAVQPPGCGRSS*GPVPTG
Trigger: CCCTGTGGGAACAGGCCCTCAGCTACTTCGCCCGCA...GCCTGGAGGCTGGACTGCAGCGGGACCTGCTGATGCACTCCAGGAGGGGAACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR TCA 90 bp CCACAGGGAGGGCTCCTGCTCTCCATGGCGCTCACACACGGCAATCACCTGCCGGCATGTGGTAATGCATaGTCTGCTGGAACAGCTTCC +
Preference number: 2 (lower is better)
Translates to: PQGGLLLSMALTHGNHLPACGNA*SAGTAS
Trigger: GGAAGCTGTTCCAGCAGATCATGCATTACCACATGC...CGGCAGGTGATTGCCGTGTGTGAGCGCCATGGAGAGCAGGAGCCCTCCCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR TCA 90 bp TGCCCTCCCCTCTGGCATGAGTTTCAGCAGTCTAGCTGTCTGTTCTGCATCCAGAGGGTCGCTCAGGGCTaGACAGCGCAGGCCACAACC +
Preference number: 2 (lower is better)
Translates to: CPPLWHEFQQSSCLFCIQRVAQG*TAQATT
Trigger: GGTTGTGGCCTGCGCTGTTCAGCCCTGAGCGACCCT...CTGGATGCAGAACAGACAGCTAGACTGCTGAAACTCATGCCAGAGGGGAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR GCA 90 bp AGGAGGAGGCAGGAAAAGCAGAGTCCCTTCTTGAGTCCTGAGGCTCCGGAACTGTTGTGGGCCAGGGTCTaGACCACTAGAAGAGGCGGC +
Preference number: 2 (lower is better)
Translates to: RRRQEKQSPFLSPEAPELLWARV*TTRRGG
Trigger: GCCGCCTCTTCTAGTGGTGCAGACCCTGGCCCACAA...CAGTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCTTTTCCTGCCTCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR CCA 90 bp ATCTCGGATGATAGACAGGGTAGCTGTGGAGTTGTGGGCCAGGGTCTGCACCACGGAGGGACAGCAGGCTaGCAAAAGGAGGAGGCAGGA +
Preference number: 2 (lower is better)
Translates to: ISDDRQGSCGVVGQGLHHGGTAG*QKEEAG
Trigger: TCCTGCCTCCTCCTTTTGCCAGCCTGCTGTCCCTCC...GTGGTGCAGACCCTGGCCCACAACTCCACAGCTACCCTGTCTATCATCCGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CAA 90 bp TTGTGGGCCAGGGTCTGCACCACTAGAAGAGGCGGCATGAGGCTCTaGTTCTCAATGTGCCTGAGCACAGCCGCCACATACTCCTTGCAG +
Preference number: 2 (lower is better)
Translates to: LWARVCTTRRGGMRL*FSMCLSTAATYSLQ
Trigger: CTGCAAGGAGTATGTGGCGGCTGTGCTCAGGCACATTGAGAACAAGAGCCTCATGCCGCCTCTTCTAGTGGTGCAGACCCTGGCCCACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR TCA 90 bp GTGCATGATTCTCAGCCAGATAGAGGGCATGGGAGTAGTAGCCAGCCTGCCGGAAGCAGAGTCCCTTCTTaGGTCCTGAGGCTCCGGAAC +
Preference number: 2 (lower is better)
Translates to: VHDSQPDRGHGSSSQPAGSRVPS*VLRLRN
Trigger: GTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCT...TCCGGCAGGCTGGCTACTACTCCCATGCCCTCTATCTGGCTGAGAATCATGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR TCA 90 bp CAGGTAATCTCGGATGATAGACAGGGTAGCTGTGGAGTTGTGGGCCAGGGTCTGGTCCAGAGAGGTTGCTaGGGTGGCCTTCCTCACTGG +
Preference number: 2 (lower is better)
Translates to: QVISDDRQGSCGVVGQGLVQRGC*GGLPHW
Trigger: CCAGTGAGGAAGGCCACCTCAGCAACCTCTCTGGAC...CAGACCCTGGCCCACAACTCCACAGCTACCCTGTCTATCATCCGAGATTACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR GCA 90 bp ACTCACAGAGATCTGCCTGCCTCTGCCTCTGCGTCCCAAGTACTATACCAGGCCAACACCCTCCACTTCTaGCCTCCCCTCTGGCATGAG +
Preference number: 2 (lower is better)
Translates to: THRDLPASASASQVLYQANTLHF*PPLWHE
Trigger: CTCATGCCAGAGGGGAGGGCAGAAGTGGAGGGTGTT...GGCCTGGTATAGTACTTGGGACGCAGAGGCAGAGGCAGGCAGATCTCTGTGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR CCA 90 bp AGGGGAGAAGCAAGCATGGTGGCTAAGGAAGGTGGCTCAGCGCTCACAGGCCTCAAGTTGTGGATGCGCTaGGCATCCAGAAACTTCCGG +
Preference number: 2 (lower is better)
Translates to: RGEASMVAKEGGSALTGLKLWMR*ASRNFR
Trigger: CCGGAAGTTTCTGGATGCCCAGCGCATCCACAACTT...GAGGCCTGTGAGCGCTGAGCCACCTTCCTTAGCCACCATGCTTGCTTCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR CCA 90 bp AGGAGGAGGCAGGAAAAGCAGAGTCCCTTCTTGAGTCCTGAGGCTCCGGAACTGGTAGCTGTGGAGTTGTaGGCCAGGGTCTGCACCACT +
Preference number: 2 (lower is better)
Translates to: RRRQEKQSPFLSPEAPELVAVEL*ARVCTT
Trigger: AGTGGTGCAGACCCTGGCCCACAACTCCACAGCTAC...CAGTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCTTTTCCTGCCTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR TCA 90 bp CTCCAGGCTGGGGGTCAGTCTGGCTGTAGGAGGGTCGGTCAGCAGAGTCAACTTACAGCCTGGTGCCCTTaGGTAGAGAATAAAGCAGCT +
Preference number: 2 (lower is better)
Translates to: LQAGGQSGCRRVGQQSQLTAWCP*VENKAA
Trigger: AGCTGCTTTATTCTCTACTCAAGGGCACCAGGCTGT...AAGTTGACTCTGCTGACCGACCCTCCTACAGCCAGACTGACCCCCAGCCTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR CCA 90 bp ATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCTGGTGCCCTTGAGTAGAGGAGGGACAGCAGGCTaGCAAAAGGAGGAGGCAGGA +
Preference number: 2 (lower is better)
Translates to: IYRLWEQGPKHSLVPLSRGGTAG*QKEEAG
Trigger: TCCTGCCTCCTCCTTTTGCCAGCCTGCTGTCCCTCC...TCTACTCAAGGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
3UTR CAA 90 bp CAGCAGGCTGGCAAAAGGAGGAGGCAGGAAAAGCAGAGTCCCTTCTaGAGTCCTGAGGCTCCGGAACTGTGGTCATGTCTGCTACCATCT +
Preference number: 2 (lower is better)
Translates to: QQAGKRRRQEKQSPF*SPEAPELWSCLLPS
Trigger: AGATGGTAGCAGACATGACCACAGTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCTTTTCCTGCCTCCTCCTTTTGCCAGCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
3UTR CAA 90 bp CAGGGTGGTATGATCAGCATTAGCCAGAGACTGCCGATGCAGGGTTaGCAGGTAGGCGGTCAAGTTGTGGATGCGCTGGGCATCCAGAAA +
Preference number: 2 (lower is better)
Translates to: QGGMISISQRLPMQG*QVGGQVVDALGIQK
Trigger: TTTCTGGATGCCCAGCGCATCCACAACTTGACCGCCTACCTGCAAACCCTGCATCGGCAGTCTCTGGCTAATGCTGATCATACCACCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213249.2
ENSMUST00000214510.2
3UTR-3UTR TCA 90 bp TTGAGTCCTGAGGCTCCGGAACTGTGGTCATGTCTGCTACCATCTCTTCCTCAGTCCCTTCTTGAGTCCTaGGGCTCCGGAACTGTGGTC +
Preference number: 2 (lower is better)
Translates to: LSPEAPELWSCLLPSLPQSLLES*GSGTVV
Trigger: GACCACAGTTCCGGAGCCTCAGGACTCAAGAAGGGA...CTGAGGAAGAGATGGTAGCAGACATGACCACAGTTCCGGAGCCTCAGGACTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
3UTR-3UTR TCA 90 bp GGCCTTCCTCACTGGTGTAGAAGAATCTATACTGCTGGTCAGCAGGAGGGACAGAGCAGAGTCCCTTCTTaGGTCCTGAGGCTCCGGAAC +
Preference number: 2 (lower is better)
Translates to: GLPHWCRRIYTAGQQEGQSRVPS*VLRLRN
Trigger: GTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCT...CTGTCCCTCCTGCTGACCAGCAGTATAGATTCTTCTACACCAGTGAGGAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
3UTR-3UTR TCA 90 bp TGTCATAGATGCCCTGCGGTGAGTCCGGCTGCACCTCACTCATGTGTTCTAGGACCTGCCGGAGGACCTTaGTGGCTGTCTCTACATCAA +
Preference number: 2 (lower is better)
Translates to: CHRCPAVSPAAPHSCVLGPAGGP*WLSLHQ
Trigger: TTGATGTAGAGACAGCCATCAAGGTCCTCCGGCAGG...TCCTAGAACACATGAGTGAGGTGCAGCCGGACTCACCGCAGGGCATCTATGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR GCA 90 bp TCAGAACTGGCCTGGGACAGAGGGGAGAAGCAAGCATGGTGGCTAAGGAAGGTGAGCAACTGGGTTGTCTaGTCCGGTATGTGGTGCATG +
Preference number: 2 (lower is better)
Translates to: SELAWDRGEKQAWWLRKVSNWVV*SGMWCM
Trigger: CATGCACCACATACCGGAGCAGACAACCCAGTTGCT...CACCTTCCTTAGCCACCATGCTTGCTTCTCCCCTCTGTCCCAGGCCAGTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR GCA 90 bp CCGCACCCGGAGCTCATCCTGTGCAATCTGCTGGCTCTGTTTCTGCAGTTTTTGTGCGGTGAGTCCGGCTaGACCTCACTCATGTGTTCT +
Preference number: 2 (lower is better)
Translates to: PHPELILCNLLALFLQFLCGESG*TSLMCS
Trigger: AGAACACATGAGTGAGGTGCAGCCGGACTCACCGCA...CAAAAACTGCAGAAACAGAGCCAGCAGATTGCACAGGATGAGCTCCGGGTGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR GCA 90 bp ACGACAAACAAGTGGGTGGTCTTTCCTGCTTGGCGAAAGGCCAGCCCAGTAACGCAGGGAAAATCCGGGTaGAGAGTGGATTGCCACCGT +
Preference number: 2 (lower is better)
Translates to: TTNKWVVFPAWRKASPVTQGKSG*RVDCHR
Trigger: ACGGTGGCAATCCACTCTGCACCCGGATTTTCCCTG...CGTTACTGGGCTGGCCTTTCGCCAAGCAGGAAAGACCACCCACTTGTTTGTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR CCA 90 bp ATCTGCTTGTCGGAGTTCTGTGAGTCCCTGCTGGTAAACTCGGACTTGGGAGAAGCTCTGTCCCTGGGATaGCAGGGAAAATCCGGGTGC +
Preference number: 2 (lower is better)
Translates to: ICLSEFCESLLVNSDLGEALSLG*QGKSGC
Trigger: GCACCCGGATTTTCCCTGCCATCCCAGGGACAGAGC...TTCTCCCAAGTCCGAGTTTACCAGCAGGGACTCACAGAACTCCGACAAGCAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR CAA 90 bp AGGACCCCATCCTGGAAGTCGTGCATCTGGCACAGAACCAATGCCTaGTCAAACACGTCACAGAATCGGCCACTCTTCAGCAGGGAGATG +
Preference number: 2 (lower is better)
Translates to: RTPSWKSCIWHRTNA*SNTSQNRPLFSREM
Trigger: CATCTCCCTGCTGAAGAGTGGCCGATTCTGTGACGTGTTTGACAAGGCATTGGTTCTGTGCCAGATGCACGACTTCCAGGATGGGGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR CCA 90 bp CTCCAGGCTGGGGGTCAGTCTGGCTGTAGGAGGGTCGGTCAGCAGAGTCAACTTCTACACTTGGTCTTCTaGAAAATCTTTGGACTCGCC +
Preference number: 2 (lower is better)
Translates to: LQAGGQSGCRRVGQQSQLLHLVF*KIFGLA
Trigger: GGCGAGTCCAAAGATTTTCCAGAAGACCAAGTGTAG...AAGTTGACTCTGCTGACCGACCCTCCTACAGCCAGACTGACCCCCAGCCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CAA 90 bp TGCACCTCACTCATGTGTTCTAGGAAGGCTTTCAGCTCTCGTGGGTaGTTGGCAAAGATGGGGATGAACTCCTCAGAACTGGCCTGGGAC +
Preference number: 2 (lower is better)
Translates to: CTSLMCSRKAFSSRG*LAKMGMNSSELAWD
Trigger: GTCCCAGGCCAGTTCTGAGGAGTTCATCCCCATCTTTGCCAACAACCCACGAGAGCTGAAAGCCTTCCTAGAACACATGAGTGAGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CAA 90 bp GATCTGCCTGCCTCTGCCTCTGCGTCCCAAGTACTATACCAGGCCTaGTGTGTGAAGACAGACTCACTGTGTAGTACACAACCCTGCTTC +
Preference number: 2 (lower is better)
Translates to: DLPASASASQVLYQA*CVKTDSLCSTQPCF
Trigger: GAAGCAGGGTTGTGTACTACACAGTGAGTCTGTCTTCACACACAAGGCCTGGTATAGTACTTGGGACGCAGAGGCAGAGGCAGGCAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR TCA 90 bp ACAGGCAAGGAACTAGAACTCAGGACGTTCTTAGATATTTGTCACCTGAGGGCGGTCCAGAGAGGTTGCTaGGGTGGCCTTCCTCACTGG +
Preference number: 2 (lower is better)
Translates to: TGKELELRTFLDICHLRAVQRGC*GGLPHW
Trigger: CCAGTGAGGAAGGCCACCTCAGCAACCTCTCTGGAC...CGCCCTCAGGTGACAAATATCTAAGAACGTCCTGAGTTCTAGTTCCTTGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
3UTR-3UTR TCA 90 bp AACAGCATCTCCAGTTTGGTCTGTGTGTCCTTCTCCTGCAATGCGTGGACCCGCCATCCCCAGCAACAATaGACTGCAGGTCTTGAGAAG +
Preference number: 2 (lower is better)
Translates to: NSISSLVCVSFSCNAWTRHPQQQ*TAGLEK
Trigger: CTTCTCAAGACCTGCAGTTCATTGTTGCTGGGGATG...GCGGGTCCACGCATTGCAGGAGAAGGACACACAGACCAAACTGGAGATGCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR GCA 90 bp CCTTCCCAGAGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACCAAACTGTGGTCATGTCTaGTACCATCTCTTCCTCAGG +
Preference number: 2 (lower is better)
Translates to: PSQRSQAPPTTQVLWSQPNCGHV*YHLFLR
Trigger: CCTGAGGAAGAGATGGTAGCAGACATGACCACAGTT...TGGTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCTCTGGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
3UTR-3UTR GCA 90 bp GTGCATGATTCTCAGCCAGATAGAGGGCATGGGAGTAGTAGCCAGCCTGCCGGAAACTGTGGTCATGTCTaGTACCATCTCTTCCTCAGG +
Preference number: 2 (lower is better)
Translates to: VHDSQPDRGHGSSSQPAGNCGHV*YHLFLR
Trigger: CCTGAGGAAGAGATGGTAGCAGACATGACCACAGTT...TCCGGCAGGCTGGCTACTACTCCCATGCCCTCTATCTGGCTGAGAATCATGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR GCA 90 bp CAGCTTCCCCTGCTCATAGAGGTAAAGGACCCCATCCTGGAAGTCGTGCATCTGTGGGTCGATAGTCAGTaGAGAGGCCTTTCAGCAACT +
Preference number: 2 (lower is better)
Translates to: QLPLLIEVKDPILEVVHLWVDSQ*RGLSAT
Trigger: AGTTGCTGAAAGGCCTCTGCACTGACTATCGACCCA...CAGATGCACGACTTCCAGGATGGGGTCCTTTACCTCTATGAGCAGGGGAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR GCA 90 bp GCTTATGGCCCTCAAAGGCAAAGCAGGGTCCACGTTCATCAGGCTGGTAAAGGTGGGTGCAGAGTGGATTaGCACCGTCTCTCTTTTCCA +
Preference number: 2 (lower is better)
Translates to: AYGPQRQSRVHVHQAGKGGCRVD*HRLSFP
Trigger: TGGAAAAGAGAGACGGTGGCAATCCACTCTGCACCC...ACCTTTACCAGCCTGATGAACGTGGACCCTGCTTTGCCTTTGAGGGCCATAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR CCA 90 bp ATCTGCTTGTCGGAGTTCTGTGAGTCCCTGCTGGTAAACTCGGACTTGGGAGAAGTGGTCTTTCCTGCTTaGCGAAAGGCCAGCCCAGTA +
Preference number: 2 (lower is better)
Translates to: ICLSEFCESLLVNSDLGEVVFPA*RKASPV
Trigger: TACTGGGCTGGCCTTTCGCCAAGCAGGAAAGACCAC...TTCTCCCAAGTCCGAGTTTACCAGCAGGGACTCACAGAACTCCGACAAGCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR CAA 90 bp GTGGTGCATGAGGGTCTTGCCATAGCGTTTCATGTTACTCTCCGCTaGCTCGAAAGGCAGCTTCCCGATATACCGAAGGGCTTCCTGATA +
Preference number: 2 (lower is better)
Translates to: VVHEGLAIAFHVTLR*LERQLPDIPKGFLI
Trigger: TATCAGGAAGCCCTTCGGTATATCGGGAAGCTGCCTTTCGAGCAAGCGGAGAGTAACATGAAACGCTATGGCAAGACCCTCATGCACCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CAA 90 bp ACCTCACTCATGTGTTCTAGGAAGGCTTTCAGCTCTCGTGGGTTGTaGGCAAAGATGGGGATGAACTCCTCAGAACTGGCCTGGGACAGA +
Preference number: 2 (lower is better)
Translates to: TSLMCSRKAFSSRGL*AKMGMNSSELAWDR
Trigger: TCTGTCCCAGGCCAGTTCTGAGGAGTTCATCCCCATCTTTGCCAACAACCCACGAGAGCTGAAAGCCTTCCTAGAACACATGAGTGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CAA 90 bp TGCAAAATCTGCGTCTTGCTGTGCCGGTCCCGGGTAATATCTCCCTaGTTCAGGGTGACACTGCCATCTGTGAACCCAATGGCCATAAAG +
Preference number: 2 (lower is better)
Translates to: CKICVLLCRSRVISP*FRVTLPSVNPMAIK
Trigger: CTTTATGGCCATTGGGTTCACAGATGGCAGTGTCACCCTGAACAAGGGAGATATTACCCGGGACCGGCACAGCAAGACGCAGATTTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR TCA 90 bp GGCCTTCCTCACTGGTGTAGAAGAATCTATACTGCTGGTCAGCAGGAGGGACAGACAGCCTGGTGCCCTTaGGTAGAGAATAAAGCAGCT +
Preference number: 2 (lower is better)
Translates to: GLPHWCRRIYTAGQQEGQTAWCP*VENKAA
Trigger: AGCTGCTTTATTCTCTACTCAAGGGCACCAGGCTGT...CTGTCCCTCCTGCTGACCAGCAGTATAGATTCTTCTACACCAGTGAGGAAGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
3UTR-3UTR CCA 90 bp ATCTCGGATGATAGACAGGGTAGCTGTGGAGTTGTGGGCCAGGGTCTGCACCACTTTATTTATAGGCTCTaGGAGCAAGGACCCAAGCAC +
Preference number: 2 (lower is better)
Translates to: ISDDRQGSCGVVGQGLHHFIYRL*EQGPKH
Trigger: GTGCTTGGGTCCTTGCTCCCAGAGCCTATAAATAAA...GTGGTGCAGACCCTGGCCCACAACTCCACAGCTACCCTGTCTATCATCCGAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR CCA 90 bp AGGGGAGAAGCAAGCATGGTGGCTAAGGAAGGTGGCTCAGCGCTCACAGGCCTCGTCTCTACATCAAAGTaGACTTCACTCTCACTCTTT +
Preference number: 2 (lower is better)
Translates to: RGEASMVAKEGGSALTGLVSTSK*TSLSLF
Trigger: AAAGAGTGAGAGTGAAGTCCACTTTGATGTAGAGAC...GAGGCCTGTGAGCGCTGAGCCACCTTCCTTAGCCACCATGCTTGCTTCTCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CAA 90 bp CCGGAGCTCATCCTGTGCAATCTGCTGGCTCTGTTTCTGCAGTTTTaGGACCAGGTAATCTCGGATGATAGACAGGGTAGCTGTGGAGTT +
Preference number: 2 (lower is better)
Translates to: PELILCNLLALFLQF*DQVISDDRQGSCGV
Trigger: AACTCCACAGCTACCCTGTCTATCATCCGAGATTACCTGGTCCAAAAACTGCAGAAACAGAGCCAGCAGATTGCACAGGATGAGCTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR TCA 90 bp TCTCACCAGCTCTCCTCACACAGGCAGCACCACAGTTTCCACAGGAAAAGTGAACAGCGCTGTAGGCTATaGACTTGTTGCACAGGTCAT +
Preference number: 2 (lower is better)
Translates to: SHQLSSHRQHHSFHRKSEQRCRL*TCCTGH
Trigger: ATGACCTGTGCAACAAGTTCATAGCCTACAGCGCTG...TTCACTTTTCCTGTGGAAACTGTGGTGCTGCCTGTGTGAGGAGAGCTGGTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR GCA 90 bp ATCAGGCTGGTAAAGGTAGACACACTCATCCCCAGCAACAATGAACTGCAGGTCCAGCCCCATCATGGTTaGCCTTGCTGTAGAGATGGT +
Preference number: 2 (lower is better)
Translates to: IRLVKVDTLIPSNNELQVQPHHG*PCCRDG
Trigger: ACCATCTCTACAGCAAGGGCAACCATGATGGGGCTG...GACCTGCAGTTCATTGTTGCTGGGGATGAGTGTGTCTACCTTTACCAGCCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR GCA 90 bp CAAGTACTATACCAGGCCTTGTGTGTGAAGACAGACTCACTGTGTAGTACACAAGTGGGTGGTCTTTCCTaGTTGGCGAAAGGCCAGCCC +
Preference number: 2 (lower is better)
Translates to: QVLYQALCVKTDSLCSTQVGGLS*LAKGQP
Trigger: GGGCTGGCCTTTCGCCAAGCAGGAAAGACCACCCAC...TTGTGTACTACACAGTGAGTCTGTCTTCACACACAAGGCCTGGTATAGTACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR CCA 90 bp CAGGGAGATGGCCTCTGCATGAAGTTTCTCCTTGGCCTGGGGATCTTTCTCATGAAGAATCTATACTGCTaGTCAGCAGGAGGGACAGCA +
Preference number: 2 (lower is better)
Translates to: QGDGLCMKFLLGLGIFLMKNLYC*SAGGTA
Trigger: TGCTGTCCCTCCTGCTGACCAGCAGTATAGATTCTT...CATGAGAAAGATCCCCAGGCCAAGGAGAAACTTCATGCAGAGGCCATCTCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR CCA 90 bp ATCTGCTTGTCGGAGTTCTGTGAGTCCCTGCTGGTAAACTCGGACTTGGGAGAACGACAAACAAGTGGGTaGTCTTTCCTGCTTGGCGAA +
Preference number: 2 (lower is better)
Translates to: ICLSEFCESLLVNSDLGERQTSG*SFLLGE
Trigger: TTCGCCAAGCAGGAAAGACCACCCACTTGTTTGTCG...TTCTCCCAAGTCCGAGTTTACCAGCAGGGACTCACAGAACTCCGACAAGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR CCA 90 bp TTTCCGGTCACGGGAGACAATGACAAGGTAGCCTCTAAACCAGTGCACGATGAGGTCACGACAAACAAGTaGGTGGTCTTTCCTGCTTGG +
Preference number: 2 (lower is better)
Translates to: FPVTGDNDKVASKPVHDEVTTNK*VVFPAW
Trigger: CCAAGCAGGAAAGACCACCCACTTGTTTGTCGTGAC...CTCATCGTGCACTGGTTTAGAGGCTACCTTGTCATTGTCTCCCGTGACCGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR CAA 90 bp AAGTGGACTGAGGGCAGCTCCAAGGCACTGTTACAGATGCTACACTaGGTCTTCTGGAAAATCTTTGGACTCGCCTTGAGCTCCTGGATT +
Preference number: 2 (lower is better)
Translates to: KWTEGSSKALLQMLH*VFWKIFGLALSSWI
Trigger: AATCCAGGAGCTCAAGGCGAGTCCAAAGATTTTCCAGAAGACCAAGTGTAGCATCTGTAACAGTGCCTTGGAGCTGCCCTCAGTCCACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CAA 90 bp AACATTTTCAGTTGTCACGACAAACAAGTGGGTGGTCTTTCCTGCTaGGCGAAAGGCCAGCCCAGTAACGGGATAGTTGCCCTTGTGCAA +
Preference number: 2 (lower is better)
Translates to: NIFSCHDKQVGGLSC*AKGQPSNGIVALVQ
Trigger: TTGCACAAGGGCAACTATCCCGTTACTGGGCTGGCCTTTCGCCAAGCAGGAAAGACCACCCACTTGTTTGTCGTGACAACTGAAAATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR TCA 90 bp AGCCCCATCATGGTTGCCCTTGCTGTAGAGATGGTCTCCATACTGCATGAAGATAGAAGCAGGGTGGTATaGTCAGCATTAGCCAGAGAC +
Preference number: 2 (lower is better)
Translates to: SPIMVALAVEMVSILHEDRSRVV*SALARD
Trigger: GTCTCTGGCTAATGCTGATCATACCACCCTGCTTCT...ATCTTCATGCAGTATGGAGACCATCTCTACAGCAAGGGCAACCATGATGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR TCA 90 bp TCCCAAGTACTATACCAGGCCTTGTGTGTGAAGACAGACTCACTGTGTAGTACAATGAACTGCAGGTCTTaGGAAGGGTCGCTCAGGGCT +
Preference number: 2 (lower is better)
Translates to: SQVLYQALCVKTDSLCSTMNCRS*EGSLRA
Trigger: AGCCCTGAGCGACCCTTCTCAAGACCTGCAGTTCAT...TGTACTACACAGTGAGTCTGTCTTCACACACAAGGCCTGGTATAGTACTTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR CCA 90 bp CTCAGGAGACAGAGCAGGAGAATCTTTGTGAGTTTGAGGCCAGCCTGGTCTACATTTATTTATAGGCTCTaGGAGCAAGGACCCAAGCAC +
Preference number: 2 (lower is better)
Translates to: LRRQSRRIFVSLRPAWSTFIYRL*EQGPKH
Trigger: GTGCTTGGGTCCTTGCTCCCAGAGCCTATAAATAAA...TGTAGACCAGGCTGGCCTCAAACTCACAAAGATTCTCCTGCTCTGTCTCCTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
3UTR-3UTR TCA 90 bp GTACTATACCAGGCCTTGTGTGTGAAGACAGACTCACTGTGTAGTACACAACCCGGTCTCCATACTGCATaGAGATTTGAGCCAACCCAT +
Preference number: 2 (lower is better)
Translates to: VLYQALCVKTDSLCSTQPGLHTA*RFEPTH
Trigger: ATGGGTTGGCTCAAATCTTCATGCAGTATGGAGACC...GGGTTGTGTACTACACAGTGAGTCTGTCTTCACACACAAGGCCTGGTATAGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR GCA 90 bp GGCAGCTCCAAGGCACTGTTACAGATGCTACACTTGGTCTTCTGGAAAATCTTTGTTCGGATATACTGCTaGACAGCCCCATCATGGTTG +
Preference number: 2 (lower is better)
Translates to: GSSKALLQMLHLVFWKIFVRIYC*TAPSWL
Trigger: CAACCATGATGGGGCTGTGCAGCAGTATATCCGAAC...AAAGATTTTCCAGAAGACCAAGTGTAGCATCTGTAACAGTGCCTTGGAGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR GCA 90 bp CAAGTACTATACCAGGCCTTGTGTGTGAAGACAGACTCACTGTGTAGTACACAAATCTGCGTCTTGCTGTaGCGGTCCCGGGTAATATCT +
Preference number: 2 (lower is better)
Translates to: QVLYQALCVKTDSLCSTQICVLL*RSRVIS
Trigger: AGATATTACCCGGGACCGGCACAGCAAGACGCAGAT...TTGTGTACTACACAGTGAGTCTGTCTTCACACACAAGGCCTGGTATAGTACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR CCA 90 bp TATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCTGGTGCCCGGTGGCCTTCCTCACTaGTGTAGAAGAATCTATACT +
Preference number: 2 (lower is better)
Translates to: YTFIYRLWEQGPKHSLVPGGLPH*CRRIYT
Trigger: AGTATAGATTCTTCTACACCAGTGAGGAAGGCCACC...GGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
3UTR-3UTR TCA 90 bp GGCAGCTCCAAGGCACTGTTACAGATGCTACACTTGGTCTTCTGGAAAATCTTTGGTCTCCATACTGCATaGAGATTTGAGCCAACCCAT +
Preference number: 2 (lower is better)
Translates to: GSSKALLQMLHLVFWKIFGLHTA*RFEPTH
Trigger: ATGGGTTGGCTCAAATCTTCATGCAGTATGGAGACC...AAAGATTTTCCAGAAGACCAAGTGTAGCATCTGTAACAGTGCCTTGGAGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR GCA 90 bp CAAGTACTATACCAGGCCTTGTGTGTGAAGACAGACTCACTGTGTAGTACACAAAACCGGATATACTGCTaGACAGCCCCATCATGGTTG +
Preference number: 2 (lower is better)
Translates to: QVLYQALCVKTDSLCSTQNRIYC*TAPSWL
Trigger: CAACCATGATGGGGCTGTGCAGCAGTATATCCGGTT...TTGTGTACTACACAGTGAGTCTGTCTTCACACACAAGGCCTGGTATAGTACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR CCA 90 bp ATCTGCTTGTCGGAGTTCTGTGAGTCCCTGCTGGTAAACTCGGACTTGGGAGAAAAGTTGAGATTCTCATaGACCGTCAAACAAGACACA +
Preference number: 2 (lower is better)
Translates to: ICLSEFCESLLVNSDLGEKLRFS*TVKQDT
Trigger: TGTGTCTTGTTTGACGGTCCATGAGAATCTCAACTT...TTCTCCCAAGTCCGAGTTTACCAGCAGGGACTCACAGAACTCCGACAAGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR CCA 90 bp GACAGGAAGACCACAGGCAAGGAACTAGAACTCAGGACGTTCTTAGATATTTGTAAGAATCTATACTGCTaGTCAGCAGGAGGGACAGCA +
Preference number: 2 (lower is better)
Translates to: DRKTTGKELELRTFLDICKNLYC*SAGGTA
Trigger: TGCTGTCCCTCCTGCTGACCAGCAGTATAGATTCTT...ACAAATATCTAAGAACGTCCTGAGTTCTAGTTCCTTGCCTGTGGTCTTCCTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
3UTR CCA 72 bp AGGGCCTGTTCCCACAGGGAGGGCTCCTGCTCTCCATaGCGCTCACACACGGCAATCACCTGCCGGTACTGC +
Preference number: 3 (lower is better)
Translates to: RACSHREGSCSP*RSHTAITCRYC
Trigger: GCAGTACCGGCAGGTGATTGCCGTGTGTGAGCGCCATGGAGAGCAGGAGCCCTCCCTGTGGGAACAGGCCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 72 bp GAACTGGCCTGGGACAGAGGGGAGAAGCAAGCATGGTaGCTAAGGAAGGTGGCTCAGCGCTCACAGGCCTCT +
Preference number: 3 (lower is better)
Translates to: ELAWDRGEKQAW*LRKVAQRSQAS
Trigger: AGAGGCCTGTGAGCGCTGAGCCACCTTCCTTAGCCACCATGCTTGCTTCTCCCCTCTGTCCCAGGCCAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 72 bp TCAGAACTGGCCTGGGACAGAGGGGAGAAGCAAGCATaGTGGCTAAGGAAGGTGGCTCAGCGCTCACAGGCC +
Preference number: 3 (lower is better)
Translates to: SELAWDRGEKQA*WLRKVAQRSQA
Trigger: GGCCTGTGAGCGCTGAGCCACCTTCCTTAGCCACCATGCTTGCTTCTCCCCTCTGTCCCAGGCCAGTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR GCA 72 bp GATCGCCTCGGCCTTCCAGACTGGGTCGATAGTCAGTaGAGAGGCCTTTCAGCAACTGGGTTGTCTGCTCCG +
Preference number: 3 (lower is better)
Translates to: DRLGLPDWVDSQ*RGLSATGLSAP
Trigger: CGGAGCAGACAACCCAGTTGCTGAAAGGCCTCTGCACTGACTATCGACCCAGTCTGGAAGGCCGAGGCGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 72 bp TCCAGTTTGGTCTGTGTGTCCTTCTCCTGCAATGCGTaGACCCGCCCATCCCGCGTCAGCACGTACAAGGAG +
Preference number: 3 (lower is better)
Translates to: SSLVCVSFSCNA*TRPSRVSTYKE
Trigger: CTCCTTGTACGTGCTGACGCGGGATGGGCGGGTCCACGCATTGCAGGAGAAGGACACACAGACCAAACTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR CAA 90 bp AGGGGAGAAGCAAGCATGGTGGCTAAGGAAGGTGGCTCAGCGCTCACAGGCCTCCATGTTACTCTCCGCTaGCTCGAAAGGCAGCTTCCC +
Preference number: 3 (lower is better)
Translates to: RGEASMVAKEGGSALTGLHVTLR*LERQLP
Trigger: GGGAAGCTGCCTTTCGAGCAAGCGGAGAGTAACATG...GAGGCCTGTGAGCGCTGAGCCACCTTCCTTAGCCACCATGCTTGCTTCTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR CAA 90 bp CAGCAACTGGGTTGTCTGCTCCGGTATGTGGTGCATGAGGGTCTTGCCATAGCGGCCTGCCGGAGGACCTaGATGGCTGTCTCTACATCA +
Preference number: 3 (lower is better)
Translates to: QQLGCLLRYVVHEGLAIAACRRT*MAVSTS
Trigger: TGATGTAGAGACAGCCATCAAGGTCCTCCGGCAGGC...CGCTATGGCAAGACCCTCATGCACCACATACCGGAGCAGACAACCCAGTTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR CAA 90 bp AGGGGAGAAGCAAGCATGGTGGCTAAGGAAGGTGGCTCAGCGCTCACAGGCCTCCTTTCAGCAACTGGGTaGTCTGCTCCGGTATGTGGT +
Preference number: 3 (lower is better)
Translates to: RGEASMVAKEGGSALTGLLSATG*SAPVCG
Trigger: ACCACATACCGGAGCAGACAACCCAGTTGCTGAAAG...GAGGCCTGTGAGCGCTGAGCCACCTTCCTTAGCCACCATGCTTGCTTCTCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR GCA 72 bp CATCTCCAGTTTGGTCTGTGTGTCCTTCTCCTGCAATaGGTGGACCCGCCCATCCCGCGTCAGCACGTACAA +
Preference number: 3 (lower is better)
Translates to: HLQFGLCVLLLQ*VDPPIPRQHVQ
Trigger: TTGTACGTGCTGACGCGGGATGGGCGGGTCCACGCATTGCAGGAGAAGGACACACAGACCAAACTGGAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR TCA 72 bp AATGAACTGCAGGTCTTGAGAAGGGTCGCTCAGGGCTaGACAGCGCAGGCCACAACCATGGGTGTCCAACTC +
Preference number: 3 (lower is better)
Translates to: NELQVLRRVAQG*TAQATTMGVQL
Trigger: GAGTTGGACACCCATGGTTGTGGCCTGCGCTGTTCAGCCCTGAGCGACCCTTCTCAAGACCTGCAGTTCATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR TCA 72 bp ACACACTCATCCCCAGCAACAATGAACTGCAGGTCTTaGGAAGGGTCGCTCAGGGCTGAACAGCGCAGGCCA +
Preference number: 3 (lower is better)
Translates to: THSSPATMNCRS*EGSLRAEQRRP
Trigger: TGGCCTGCGCTGTTCAGCCCTGAGCGACCCTTCTCAAGACCTGCAGTTCATTGTTGCTGGGGATGAGTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR GCA 72 bp ATAGACAGGGTAGCTGTGGAGTTGTGGGCCAGGGTCTaGACCACTAGAAGAGGCGGCATGAGGCTCTTGTTC +
Preference number: 3 (lower is better)
Translates to: IDRVAVELWARV*TTRRGGMRLLF
Trigger: GAACAAGAGCCTCATGCCGCCTCTTCTAGTGGTGCAGACCCTGGCCCACAACTCCACAGCTACCCTGTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR GCA 72 bp CTTCAGAGGCCCAGGGATATAGGCTTCCCCAGGAGCTaGCTAACTAAGTTCCCCTCCTGGAGTGCATCAGCA +
Preference number: 3 (lower is better)
Translates to: LQRPRDIGFPRS*LTKFPSWSASA
Trigger: TGCTGATGCACTCCAGGAGGGGAACTTAGTTAGGCAGCTCCTGGGGAAGCCTATATCCCTGGGCCTCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR GCA 72 bp TTGGCTCTGTCCCTGGGATGGCAGGGAAAATCCGGGTaGAGAGTGGATTGCCACCGTCTCTCTTTTCCAGGT +
Preference number: 3 (lower is better)
Translates to: LALSLGWQGKSG*RVDCHRLSFPG
Trigger: ACCTGGAAAAGAGAGACGGTGGCAATCCACTCTGCACCCGGATTTTCCCTGCCATCCCAGGGACAGAGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR CAA 90 bp CTCCAGGCTGGGGGTCAGTCTGGCTGTAGGAGGGTCGGTCAGCAGAGTCAACTTAGAATCTTTGTGAGTTaGAGGCCAGCCTGGTCTACA +
Preference number: 3 (lower is better)
Translates to: LQAGGQSGCRRVGQQSQLRIFVS*RPAWST
Trigger: TGTAGACCAGGCTGGCCTCAAACTCACAAAGATTCT...AAGTTGACTCTGCTGACCGACCCTCCTACAGCCAGACTGACCCCCAGCCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR TCA 72 bp GAGGAGGCAGGAAAAGCAGAGTCCCTTCTTGAGTCCTaGGGCTCCGGAACTGTGGTCATGTCTGCTACCATC +
Preference number: 3 (lower is better)
Translates to: EEAGKAESLLES*GSGTVVMSATI
Trigger: GATGGTAGCAGACATGACCACAGTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCTTTTCCTGCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
3UTR TCA 72 bp GCAAAAGGAGGAGGCAGGAAAAGCAGAGTCCCTTCTTaGGTCCTGAGGCTCCGGAACTGTGGTCATGTCTGC +
Preference number: 3 (lower is better)
Translates to: AKGGGRKSRVPS*VLRLRNCGHVC
Trigger: GCAGACATGACCACAGTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCTTTTCCTGCCTCCTCCTTTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
3UTR TCA 72 bp CTTTCAGCTCTCGTGGGTTGTTGGCAAAGATGGGGATaGACTCCTCAGAACTGGCCTGGGACAGAGGGGAGA +
Preference number: 3 (lower is better)
Translates to: LSALVGCWQRWG*TPQNWPGTEGR
Trigger: TCTCCCCTCTGTCCCAGGCCAGTTCTGAGGAGTTCATCCCCATCTTTGCCAACAACCCACGAGAGCTGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR TCA 72 bp GTGTTGGTGGAAGGAGTGGCCACACAGGAAGTGGACTaGGGGCAGCTCCAAGGCACTGTTACAGATGCTACA +
Preference number: 3 (lower is better)
Translates to: VLVEGVATQEVD*GQLQGTVTDAT
Trigger: TGTAGCATCTGTAACAGTGCCTTGGAGCTGCCCTCAGTCCACTTCCTGTGTGGCCACTCCTTCCACCAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR GCA 72 bp GATGCAGGGTTTGCAGGTAGGCGGTCAAGTTGTGGATaGGCTGGGCATCCAGAAACTTCCGGATCACATAGG +
Preference number: 3 (lower is better)
Translates to: DAGFAGRRSSCG*AGHPETSGSHR
Trigger: CCTATGTGATCCGGAAGTTTCTGGATGCCCAGCGCATCCACAACTTGACCGCCTACCTGCAAACCCTGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR GCA 72 bp ACTAGAAGAGGCGGCATGAGGCTCTTGTTCTCAATGTaGCTGAGCACAGCCGCCACATACTCCTTGCAGTCC +
Preference number: 3 (lower is better)
Translates to: TRRGGMRLLFSM*LSTAATYSLQS
Trigger: GGACTGCAAGGAGTATGTGGCGGCTGTGCTCAGGCACATTGAGAACAAGAGCCTCATGCCGCCTCTTCTAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 72 bp CAGAGTCCCTTCTTGAGTCCTGAGGCTCCGGAACTGTaGTCATGTCTGCTACCATCTCTTCCTCAGGCCTAC +
Preference number: 3 (lower is better)
Translates to: QSPFLSPEAPEL*SCLLPSLPQAY
Trigger: GTAGGCCTGAGGAAGAGATGGTAGCAGACATGACCACAGTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
3UTR CCA 72 bp TTGGCAAAGATGGGGATGAACTCCTCAGAACTGGCCTaGGACAGAGGGGAGAAGCAAGCATGGTGGCTAAGG +
Preference number: 3 (lower is better)
Translates to: LAKMGMNSSELA*DRGEKQAWWLR
Trigger: CCTTAGCCACCATGCTTGCTTCTCCCCTCTGTCCCAGGCCAGTTCTGAGGAGTTCATCCCCATCTTTGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 72 bp ACACGTCACAGAATCGGCCACTCTTCAGCAGGGAGATaGCCTCTGCATGAAGTTTCTCCTTGGCCTGGGGAT +
Preference number: 3 (lower is better)
Translates to: TRHRIGHSSAGR*PLHEVSPWPGD
Trigger: ATCCCCAGGCCAAGGAGAAACTTCATGCAGAGGCCATCTCCCTGCTGAAGAGTGGCCGATTCTGTGACGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 72 bp AAAATCTTTGGACTCGCCTTGAGCTCCTGGATTTCCTaGCGGATGCGAGTGGTCTCCTCTCTGTATCGCCGC +
Preference number: 3 (lower is better)
Translates to: KIFGLALSSWIS*RMRVVSSLYRR
Trigger: GCGGCGATACAGAGAGGAGACCACTCGCATCCGCCAGGAAATCCAGGAGCTCAAGGCGAGTCCAAAGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 72 bp AAGCAGTGTTGGTGGAAGGAGTGGCCACACAGGAAGTaGACTGAGGGCAGCTCCAAGGCACTGTTACAGATG +
Preference number: 3 (lower is better)
Translates to: KQCWWKEWPHRK*TEGSSKALLQM
Trigger: CATCTGTAACAGTGCCTTGGAGCTGCCCTCAGTCCACTTCCTGTGTGGCCACTCCTTCCACCAACACTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 72 bp TGTCCCTGGGATGGCAGGGAAAATCCGGGTGCAGAGTaGATTGCCACCGTCTCTCTTTTCCAGGTTCCAGAT +
Preference number: 3 (lower is better)
Translates to: CPWDGRENPGAE*IATVSLFQVPD
Trigger: ATCTGGAACCTGGAAAAGAGAGACGGTGGCAATCCACTCTGCACCCGGATTTTCCCTGCCATCCCAGGGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR CAA 90 bp AGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACCAGACAGGAAGTATTGTCCAGAGAGGTaGCTGAGGTGGCCTTCCTCA +
Preference number: 3 (lower is better)
Translates to: RSQAPPTTQVLWSQPDRKYCPER*LRWPSS
Trigger: TGAGGAAGGCCACCTCAGCAACCTCTCTGGACAATA...CTTCCTGTCTGGTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
3UTR-3UTR CAA 90 bp CTCCAGGCTGGGGGTCAGTCTGGCTGTAGGAGGGTCGGTCAGCAGAGTCAACTTATACTGCATGAAGATTaGAGCCAACCCATCACTGTC +
Preference number: 3 (lower is better)
Translates to: LQAGGQSGCRRVGQQSQLILHED*SQPITV
Trigger: GACAGTGATGGGTTGGCTCAAATCTTCATGCAGTAT...AAGTTGACTCTGCTGACCGACCCTCCTACAGCCAGACTGACCCCCAGCCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR CAA 90 bp GAATCGGCCACTCTTCAGCAGGGAGATGGCCTCTGCATGAAGTTTCTCCTTGGCTTCAGCTCTCGTGGGTaGTTGGCAAAGATGGGGATG +
Preference number: 3 (lower is better)
Translates to: ESATLQQGDGLCMKFLLGFSSRG*LAKMGM
Trigger: CATCCCCATCTTTGCCAACAACCCACGAGAGCTGAA...GCCAAGGAGAAACTTCATGCAGAGGCCATCTCCCTGCTGAAGAGTGGCCGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR TCA 72 bp GCTGGTAAAGGTAGACACACTCATCCCCAGCAACAATaGACTGCAGGTCTTGAGAAGGGTCGCTCAGGGCTG +
Preference number: 3 (lower is better)
Translates to: AGKGRHTHPQQQ*TAGLEKGRSGL
Trigger: CAGCCCTGAGCGACCCTTCTCAAGACCTGCAGTTCATTGTTGCTGGGGATGAGTGTGTCTACCTTTACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR CCA 72 bp GTCTTCTGGAAAATCTTTGGACTCGCCTTGAGCTCCTaGATTTCCTGGCGGATGCGAGTGGTCTCCTCTCTG +
Preference number: 3 (lower is better)
Translates to: VFWKIFGLALSS*ISWRMRVVSSL
Trigger: CAGAGAGGAGACCACTCGCATCCGCCAGGAAATCCAGGAGCTCAAGGCGAGTCCAAAGATTTTCCAGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 72 bp TCAAACAAGACACAACAGTTGGCTCTGTCCCTGGGATaGCAGGGAAAATCCGGGTGCAGAGTGGATTGCCAC +
Preference number: 3 (lower is better)
Translates to: SNKTQQLALSLG*QGKSGCRVDCH
Trigger: GTGGCAATCCACTCTGCACCCGGATTTTCCCTGCCATCCCAGGGACAGAGCCAACTGTTGTGTCTTGTTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR GCA 72 bp CCCATCCTGGAAGTCGTGCATCTGGCACAGAACCAATaGCTTGTCAAACACGTCACAGAATCGGCCACTCTT +
Preference number: 3 (lower is better)
Translates to: PILEVVHLAQNQ*LVKHVTESATL
Trigger: AAGAGTGGCCGATTCTGTGACGTGTTTGACAAGGCATTGGTTCTGTGCCAGATGCACGACTTCCAGGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR GCA 72 bp CTGGGATGGCAGGGAAAATCCGGGTGCAGAGTGGATTaGCACCGTCTCTCTTTTCCAGGTTCCAGATCTTTA +
Preference number: 3 (lower is better)
Translates to: LGWQGKSGCRVD*HRLSFPGSRSL
Trigger: TAAAGATCTGGAACCTGGAAAAGAGAGACGGTGGCAATCCACTCTGCACCCGGATTTTCCCTGCCATCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR GCA 72 bp TGTGTGAAGACAGACTCACTGTGTAGTACACAACCCTaGTTCAGTCCTGGGACTCAGGCACTCTCACCAGCT +
Preference number: 3 (lower is better)
Translates to: CVKTDSLCSTQP*FSPGTQALSPA
Trigger: AGCTGGTGAGAGTGCCTGAGTCCCAGGACTGAAGCAGGGTTGTGTACTACACAGTGAGTCTGTCTTCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR CCA 72 bp CCTCACCTACAGAAGGTCTCTGTAAACAAGGAGAGTTaGCCTACCTCCCAGCCATTACTTCCCTCCAAAGCC +
Preference number: 3 (lower is better)
Translates to: PHLQKVSVNKES*PTSQPLLPSKA
Trigger: GGCTTTGGAGGGAAGTAATGGCTGGGAGGTAGGCCAACTCTCCTTGTTTACAGAGACCTTCTGTAGGTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 72 bp GAGATTCTCATGGACCGTCAAACAAGACACAACAGTTaGCTCTGTCCCTGGGATGGCAGGGAAAATCCGGGT +
Preference number: 3 (lower is better)
Translates to: EILMDRQTRHNS*LCPWDGRENPG
Trigger: ACCCGGATTTTCCCTGCCATCCCAGGGACAGAGCCAACTGTTGTGTCTTGTTTGACGGTCCATGAGAATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR CAA 90 bp CCACTCAGCCAGCACATCCACTATATCCTCAAACCCAGCGCTGTAGGCTATGAACGGGTAATATCTCCCTaGTTCAGGGTGACACTGCCA +
Preference number: 3 (lower is better)
Translates to: PLSQHIHYILKPSAVGYERVISP*FRVTLP
Trigger: TGGCAGTGTCACCCTGAACAAGGGAGATATTACCCG...TTCATAGCCTACAGCGCTGGGTTTGAGGATATAGTGGATGTGCTGGCTGAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR CAA 90 bp TCCCAAGTACTATACCAGGCCTTGTGTGTGAAGACAGACTCACTGTGTAGTACATGCAAAATCTGCGTCTaGCTGTGCCGGTCCCGGGTA +
Preference number: 3 (lower is better)
Translates to: SQVLYQALCVKTDSLCSTCKICV*LCRSRV
Trigger: TACCCGGGACCGGCACAGCAAGACGCAGATTTTGCA...TGTACTACACAGTGAGTCTGTCTTCACACACAAGGCCTGGTATAGTACTTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR TCA 72 bp CCTCTGCGTCCCAAGTACTATACCAGGCCTTGTGTGTaGAGACAGACTCACTGTGTAGTACACAACCCTGCT +
Preference number: 3 (lower is better)
Translates to: PLRPKYYTRPCV*RQTHCVVHNPA
Trigger: AGCAGGGTTGTGTACTACACAGTGAGTCTGTCTTCACACACAAGGCCTGGTATAGTACTTGGGACGCAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR GCA 72 bp TTCAGTTGTCACGACAAACAAGTGGGTGGTCTTTCCTaGTTGGCGAAAGGCCAGCCCAGTAACGGGATAGTT +
Preference number: 3 (lower is better)
Translates to: FSCHDKQVGGLS*LAKGQPSNGIV
Trigger: AACTATCCCGTTACTGGGCTGGCCTTTCGCCAAGCAGGAAAGACCACCCACTTGTTTGTCGTGACAACTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR GCA 72 bp CTCTGGCATGAGTTTCAGCAGTCTAGCTGTCTGTTCTaGATCCAGAGCTACATCCCAGAGCATACCCAGACT +
Preference number: 3 (lower is better)
Translates to: LWHEFQQSSCLF*IQSYIPEHTQT
Trigger: AGTCTGGGTATGCTCTGGGATGTAGCTCTGGATGCAGAACAGACAGCTAGACTGCTGAAACTCATGCCAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR GCA 72 bp GAACTCTTCCTGATGAAATACAACACCCTCCACTTCTaGCCTCCCCTCTGGCATGAGTTTCAGCAGTCTAGC +
Preference number: 3 (lower is better)
Translates to: ELFLMKYNTLHF*PPLWHEFQQSS
Trigger: GCTAGACTGCTGAAACTCATGCCAGAGGGGAGGGCAGAAGTGGAGGGTGTTGTATTTCATCAGGAAGAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR CCA 72 bp GCGCTGGGCATCCAGAAACTTCCGGATCACATAGGATaGCTCCAACTTTCCAATGGTTCGGATATACTGCTG +
Preference number: 3 (lower is better)
Translates to: ALGIQKLPDHIG*LQLSNGSDILL
Trigger: CAGCAGTATATCCGAACCATTGGAAAGTTGGAGCCATCCTATGTGATCCGGAAGTTTCTGGATGCCCAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR-3UTR CAA 90 bp CAGGAAGACCACAGGCAAGGAACTAGAACTCAGGACGTTCTTAGATATTTGTCAAAGCAGAGTCCCTTCTaGAGTCCTGAGGCTCCGGAA +
Preference number: 3 (lower is better)
Translates to: QEDHRQGTRTQDVLRYLSKQSPF*SPEAPE
Trigger: TTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCTT...TGACAAATATCTAAGAACGTCCTGAGTTCTAGTTCCTTGCCTGTGGTCTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
3UTR-3UTR CAA 90 bp TTGAGTCCTGAGGCTCCGGAACTGTGGTCATGTCTGCTACCATCTCTTCCTCAGAGAGAGATTAGGACATaGGTAGAAAGAGTCCTGAGA +
Preference number: 3 (lower is better)
Translates to: LSPEAPELWSCLLPSLPQREIRT*VERVLR
Trigger: TCTCAGGACTCTTTCTACCAATGTCCTAATCTCTCT...CTGAGGAAGAGATGGTAGCAGACATGACCACAGTTCCGGAGCCTCAGGACTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR TCA 72 bp GTCATAGATGTTGAGAATCTGCTTGTCGGAGTTCTGTaGGTCCCTGCTGGTAAACTCGGACTTGGGAGAAAC +
Preference number: 3 (lower is better)
Translates to: VIDVENLLVGVL*VPAGKLGLGRN
Trigger: GTTTCTCCCAAGTCCGAGTTTACCAGCAGGGACTCACAGAACTCCGACAAGCAGATTCTCAACATCTATGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR CAA 90 bp CTTGGGAGAAACTTTCCGGTCACGGGAGACAATGACAAGGTAGCCTCTAAACCAATACTGCATGAAGATTaGAGCCAACCCATCACTGTC +
Preference number: 3 (lower is better)
Translates to: LGRNFPVTGDNDKVASKPILHED*SQPITV
Trigger: GACAGTGATGGGTTGGCTCAAATCTTCATGCAGTAT...TGGTTTAGAGGCTACCTTGTCATTGTCTCCCGTGACCGGAAAGTTTCTCCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR CAA 90 bp CTAAACCAGTGCACGATGAGCTTATGGCCCTCAAAGGCAAAGCAGGGTCCACGTATCACTGTCCAAATGTaGACTCTTAGCCAGATTAAT +
Preference number: 3 (lower is better)
Translates to: LNQCTMSLWPSKAKQGPRITVQM*TLSQIN
Trigger: ATTAATCTGGCTAAGAGTCAACATTTGGACAGTGAT...ACGTGGACCCTGCTTTGCCTTTGAGGGCCATAAGCTCATCGTGCACTGGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR TCA 72 bp GGTTGCCCTTGCTGTAGAGATGGTCTCCATACTGCATaGAGATTTGAGCCAACCCATCACTGTCCAAATGTT +
Preference number: 3 (lower is better)
Translates to: GCPCCRDGLHTA*RFEPTHHCPNV
Trigger: AACATTTGGACAGTGATGGGTTGGCTCAAATCTTCATGCAGTATGGAGACCATCTCTACAGCAAGGGCAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213740.2
ENSMUST00000214510.2
3UTR TCA 72 bp CTCACACAGGCAGCACCACAGTTTCCACAGGAAAAGTaGACTCTTCCTGATGAAATACAACACCCTCCACTT +
Preference number: 3 (lower is better)
Translates to: LTQAAPQFPQEK*TLPDEIQHPPL
Trigger: AAGTGGAGGGTGTTGTATTTCATCAGGAAGAGTTCACTTTTCCTGTGGAAACTGTGGTGCTGCCTGTGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR CCA 72 bp CAGTCCTCATACTATTATACTTTTATTTATAGGCTCTaGGAGCAAGGACCCAAGCACAGCCTGGTGCCCTTG +
Preference number: 3 (lower is better)
Translates to: QSSYYYTFIYRL*EQGPKHSLVPL
Trigger: CAAGGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATAATAGTATGAGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
3UTR CCA 72 bp TGCCGGAGGACCTTGATGGCTGTCTCTACATCAAAGTaGACTTCACTCTCACTCTTTGTCTTGATGAATTCC +
Preference number: 3 (lower is better)
Translates to: CRRTLMAVSTSK*TSLSLFVLMNS
Trigger: GGAATTCATCAAGACAAAGAGTGAGAGTGAAGTCCACTTTGATGTAGAGACAGCCATCAAGGTCCTCCGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213249.2
ENSMUST00000214510.2
3UTR CCA 72 bp TCCAAGGCACTGTTACAGATGCTACACTTGGTCTTCTaGAAAATCTTTGGACTCGCCTTGAGCTCCTGGATT +
Preference number: 3 (lower is better)
Translates to: SKALLQMLHLVF*KIFGLALSSWI
Trigger: AATCCAGGAGCTCAAGGCGAGTCCAAAGATTTTCCAGAAGACCAAGTGTAGCATCTGTAACAGTGCCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CCA 72 bp TCTGTGAACCCAATGGCCATAAAGTTGAGATTCTCATaGACCGTCAAACAAGACACAACAGTTGGCTCTGTC +
Preference number: 3 (lower is better)
Translates to: SVNPMAIKLRFS*TVKQDTTVGSV
Trigger: GACAGAGCCAACTGTTGTGTCTTGTTTGACGGTCCATGAGAATCTCAACTTTATGGCCATTGGGTTCACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
3UTR-3UTR CAA 90 bp TTTCAGTCCTCATACTATTATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCAGAATAAAGCAGCTATaGTCCAGAGAGGTTGCTGAG +
Preference number: 3 (lower is better)
Translates to: FQSSYYYTFIYRLWEQGPRIKQL*SREVAE
Trigger: CTCAGCAACCTCTCTGGACAATAGCTGCTTTATTCT...GGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATAATAGTATGAGGACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR CCA 90 bp CTGCTTCCCAGGTCTCACCCGGCAGCTCAGAGCCTCCCGATCGCCTCGGCCTTCGTGGTCTTTCCTGCTTaGCGAAAGGCCAGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: LLPRSHPAAQSLPIASAFVVFPA*RKASPV
Trigger: TACTGGGCTGGCCTTTCGCCAAGCAGGAAAGACCAC...GAAGGCCGAGGCGATCGGGAGGCTCTGAGCTGCCGGGTGAGACCTGGGAAGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR TCA 90 bp GCGGGCGAAGTAGCTGAGGGCCTGTTCCCACAGGGAGGGCTCCTGCTCTCCATGCTTGTCGGAGTTCTGTaGGTCCCTGCTGGTAAACTC +
Preference number: 4 (lower is better)
Translates to: AGEVAEGLFPQGGLLLSMLVGVL*VPAGKL
Trigger: GAGTTTACCAGCAGGGACTCACAGAACTCCGACAAG...CATGGAGAGCAGGAGCCCTCCCTGTGGGAACAGGCCCTCAGCTACTTCGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp ATTCTCAGCCAGATAGAGGGCATGGGAGTAGTAGCCAGCCTGCCGGAGGACCTTGTCCTTCTCCTGCAATaGGTGGACCCGCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: ILSQIEGMGVVASLPEDLVLLLQ*VDPPIP
Trigger: CGGGATGGGCGGGTCCACGCATTGCAGGAGAAGGAC...AAGGTCCTCCGGCAGGCTGGCTACTACTCCCATGCCCTCTATCTGGCTGAGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp CCTTCCCAGAGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACCATCATGGGCCCAGTTCTaGAGCCGCAGCTCCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PSQRSQAPPTTQVLWSQPSWAQF*SRSSRS
Trigger: GCTCCTGGAGCTGCGGCTGCAGAACTGGGCCCATGA...TGGTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCTCTGGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp TCAGAACTGGCCTGGGACAGAGGGGAGAAGCAAGCATGGTGGCTAAGGAAGGTGTTCTCCTGCAATGCGTaGACCCGCCCATCCCGCGTC +
Preference number: 4 (lower is better)
Translates to: SELAWDRGEKQAWWLRKVFSCNA*TRPSRV
Trigger: GACGCGGGATGGGCGGGTCCACGCATTGCAGGAGAA...CACCTTCCTTAGCCACCATGCTTGCTTCTCCCCTCTGTCCCAGGCCAGTTCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp CAGGCCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGCTTCCCCAGGAGCTGCCCTTGTGCAAAATCTaGGTCTTGCTGTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: QAYVCASEAQGYRLPQELPLCKI*VLLCRS
Trigger: GGACCGGCACAGCAAGACGCAGATTTTGCACAAGGG...CAGCTCCTGGGGAAGCCTATATCCCTGGGCCTCTGAAGCACAGACGTAGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp CAGGCCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGCTTCCCCAGGAGCTGTGCGGTGAGTCCGGCTaGACCTCACTCATGTGTTCT +
Preference number: 4 (lower is better)
Translates to: QAYVCASEAQGYRLPQELCGESG*TSLMCS
Trigger: AGAACACATGAGTGAGGTGCAGCCGGACTCACCGCA...CAGCTCCTGGGGAAGCCTATATCCCTGGGCCTCTGAAGCACAGACGTAGGCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp ACCTTCCCAGAGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACCGCTCTGTCCCTGGGATaGCAGGGAAAATCCGGGTGC +
Preference number: 4 (lower is better)
Translates to: TFPEVTGPTHYSSVMEPTALSLG*QGKSGC
Trigger: GCACCCGGATTTTCCCTGCCATCCCAGGGACAGAGC...GGTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCTCTGGGAAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR TCA 90 bp CTATGTATCAACACAGTGAACTTCTTAACCTTCCCAGAGGTCACAGGCCCCACCCAGGCTCCCGCGGCCTaGGTCGCAGACAGTGATGCC +
Preference number: 4 (lower is better)
Translates to: LCINTVNFLTFPEVTGPTQAPAA*VADSDA
Trigger: GGCATCACTGTCTGCGACTCAGGCCGCGGGAGCCTG...GGTGGGGCCTGTGACCTCTGGGAAGGTTAAGAAGTTCACTGTGTTGATACATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR TCA 90 bp TGCCATAGCGTTTCATGTTACTCTCCGCTTGCTCGAAAGGCAGCTTCCCGATATCAGGCTCCCGCGGCCTaGGTCGCAGACAGTGATGCC +
Preference number: 4 (lower is better)
Translates to: CHSVSCYSPLARKAASRYQAPAA*VADSDA
Trigger: GGCATCACTGTCTGCGACTCAGGCCGCGGGAGCCTG...ATATCGGGAAGCTGCCTTTCGAGCAAGCGGAGAGTAACATGAAACGCTATGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR TCA 90 bp ATAGAGGGCATGGGAGTAGTAGCCAGCCTGCCGGAGGACCTTGATGGCTGTCTCATGAACTGCAGGTCTTaGGAAGGGTCGCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: IEGMGVVASLPEDLDGCLMNCRS*EGSLRA
Trigger: AGCCCTGAGCGACCCTTCTCAAGACCTGCAGTTCAT...GAGACAGCCATCAAGGTCCTCCGGCAGGCTGGCTACTACTCCCATGCCCTCTAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR TCA 90 bp TCTCTTCCTCAGGCCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGCTTCCCACACAGGAAGTGGACTaGGGGCAGCTCCAAGGCACT +
Preference number: 4 (lower is better)
Translates to: SLPQAYVCASEAQGYRLPTQEVD*GQLQGT
Trigger: AGTGCCTTGGAGCTGCCCTCAGTCCACTTCCTGTGT...GGGAAGCCTATATCCCTGGGCCTCTGAAGCACAGACGTAGGCCTGAGGAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR GCA 90 bp CAGGCCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGCTTCCCCAGGAGCTGATCTGCGTCTTGCTGTaGCGGTCCCGGGTAATATCT +
Preference number: 4 (lower is better)
Translates to: QAYVCASEAQGYRLPQELICVLL*RSRVIS
Trigger: AGATATTACCCGGGACCGGCACAGCAAGACGCAGAT...CAGCTCCTGGGGAAGCCTATATCCCTGGGCCTCTGAAGCACAGACGTAGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp GGCCTTCCTCACTGGTGTAGAAGAATCTATACTGCTGGTCAGCAGGAGGGACAGGTCCTTCTCCTGCAATaGGTGGACCCGCCCATCCCG +
Preference number: 4 (lower is better)
Translates to: GLPHWCRRIYTAGQQEGQVLLLQ*VDPPIP
Trigger: CGGGATGGGCGGGTCCACGCATTGCAGGAGAAGGAC...CTGTCCCTCCTGCTGACCAGCAGTATAGATTCTTCTACACCAGTGAGGAAGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp CTACCATCTCTTCCTCAGGCCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGTTGTGGGCCAGGGTCTaGACCACTAGAAGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: LPSLPQAYVCASEAQGYRLWARV*TTRRGG
Trigger: GCCGCCTCTTCTAGTGGTGCAGACCCTGGCCCACAA...CCTATATCCCTGGGCCTCTGAAGCACAGACGTAGGCCTGAGGAAGAGATGGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp CCCAGAGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACCAGACACGCAGGCCACAACCATaGGTGTCCAACTCCACACGA +
Preference number: 4 (lower is better)
Translates to: PRGHRPHPLLKCYGANQTRRPQP*VSNSTR
Trigger: TCGTGTGGAGTTGGACACCCATGGTTGTGGCCTGCG...TGTCTGGTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCTCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp CAGGCCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGCTTCCCCAGGAGCTGGGCTTTCAGCTCTCGTaGGTTGTTGGCAAAGATGGG +
Preference number: 4 (lower is better)
Translates to: QAYVCASEAQGYRLPQELGFQLS*VVGKDG
Trigger: CCCATCTTTGCCAACAACCCACGAGAGCTGAAAGCC...CAGCTCCTGGGGAAGCCTATATCCCTGGGCCTCTGAAGCACAGACGTAGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp CAGGCCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGCTTCCCCAGGAGCTGTGTTGGTGGAAGGAGTaGCCACACAGGAAGTGGACT +
Preference number: 4 (lower is better)
Translates to: QAYVCASEAQGYRLPQELCWWKE*PHRKWT
Trigger: AGTCCACTTCCTGTGTGGCCACTCCTTCCACCAACA...CAGCTCCTGGGGAAGCCTATATCCCTGGGCCTCTGAAGCACAGACGTAGGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR TCA 90 bp TGTGAGTTTGAGGCCAGCCTGGTCTACATAATGAGTTATAAGCCGGCCGAGGATAGGGTCGCTCAGGGCTaGACAGCGCAGGCCACAACC +
Preference number: 4 (lower is better)
Translates to: CEFEASLVYIMSYKPAEDRVAQG*TAQATT
Trigger: GGTTGTGGCCTGCGCTGTTCAGCCCTGAGCGACCCT...ATCCTCGGCCGGCTTATAACTCATTATGTAGACCAGGCTGGCCTCAAACTCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR TCA 90 bp ACCTTCCCAGAGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACCTGGCAAAGATGGGGATaGACTCCTCAGAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: TFPEVTGPTHYSSVMEPTWQRWG*TPQNWP
Trigger: GGGCCAGTTCTGAGGAGTTCATCCCCATCTTTGCCA...GGTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCTCTGGGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR TCA 90 bp CAGGCCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGCTTCCCCAGGAGCTGGAGGAAGGCTCTGTGTaGCCCAAAGGAAAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: QAYVCASEAQGYRLPQELEEGSV*PKGKRS
Trigger: ACTTCTCTTTCCTTTGGGTCACACAGAGCCTTCCTC...CAGCTCCTGGGGAAGCCTATATCCCTGGGCCTCTGAAGCACAGACGTAGGCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp CAGATAGAGGGCATGGGAGTAGTAGCCAGCCTGCCGGAGGACCTTGATGGCTGTCAGCCCCATCATGGTTaGCCTTGCTGTAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: QIEGMGVVASLPEDLDGCQPHHG*PCCRDG
Trigger: ACCATCTCTACAGCAAGGGCAACCATGATGGGGCTG...ACAGCCATCAAGGTCCTCCGGCAGGCTGGCTACTACTCCCATGCCCTCTATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213249.2
CDS-3UTR GCA 90 bp CCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGCTTCCCCAGGAGCTGCCTAAGCAACTGGGTTGTCTaGTCCGGTATGTGGTGCATG +
Preference number: 4 (lower is better)
Translates to: PTSVLQRPRDIGFPRSCLSNWVV*SGMWCM
Trigger: CATGCACCACATACCGGAGCAGACAACCCAGTTGCT...TAGGCAGCTCCTGGGGAAGCCTATATCCCTGGGCCTCTGAAGCACAGACGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR GCA 90 bp ATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCTGGTGCCCTTGAGTAGACACACGGCAATCACCTaGCGGTACTGCTCGTGCTGC +
Preference number: 4 (lower is better)
Translates to: IYRLWEQGPKHSLVPLSRHTAIT*RYCSCC
Trigger: GCAGCACGAGCAGTACCGGCAGGTGATTGCCGTGTG...TCTACTCAAGGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR GCA 90 bp CTCAGGAGACAGAGCAGGAGAATCTTTGTGAGTTTGAGGCCAGCCTGGTCTACACACAGGGAGGGCTCCTaGTCTCCATGGCGCTCACAC +
Preference number: 4 (lower is better)
Translates to: LRRQSRRIFVSLRPAWSTHREGS*SPWRSH
Trigger: GTGTGAGCGCCATGGAGAGCAGGAGCCCTCCCTGTG...TGTAGACCAGGCTGGCCTCAAACTCACAAAGATTCTCCTGCTCTGTCTCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR GCA 90 bp ATAGAGGGCATGGGAGTAGTAGCCAGCCTGCCGGAGGACCTTGATGGCTGTCTCAGAACCTGGTGGCCTTaGCTCCAGTTTGGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: IEGMGVVASLPEDLDGCLRTWWP*LQFGLC
Trigger: ACACAGACCAAACTGGAGGCAAGGCCACCAGGTTCT...GAGACAGCCATCAAGGTCCTCCGGCAGGCTGGCTACTACTCCCATGCCCTCTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR CCA 90 bp ACCTTCCCAGAGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACCGTGGTCTTTCCTGCTTaGCGAAAGGCCAGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: TFPEVTGPTHYSSVMEPTVVFPA*RKASPV
Trigger: TACTGGGCTGGCCTTTCGCCAAGCAGGAAAGACCAC...GGTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCTCTGGGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp AGGCAGGAAAAGCAGAGTCCCTTCTTGAGTCCTGAGGCTCCGGAACTGTGGTCACGCAGGCCACAACCATaGGTGTCCAACTCCACACGA +
Preference number: 4 (lower is better)
Translates to: RQEKQSPFLSPEAPELWSRRPQP*VSNSTR
Trigger: TCGTGTGGAGTTGGACACCCATGGTTGTGGCCTGCG...TGACCACAGTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCTTTTCCTGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR CCA 90 bp CTACCATCTCTTCCTCAGGCCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGTGGGGATCTTTCTCATaGGCCCAGTTCTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LPSLPQAYVCASEAQGYRWGSFS*AQFCSR
Trigger: GCGGCTGCAGAACTGGGCCCATGAGAAAGATCCCCA...CCTATATCCCTGGGCCTCTGAAGCACAGACGTAGGCCTGAGGAAGAGATGGTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp AGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACCAGACAGGAAGCTCGCCTTGAGCTCCTaGATTTCCTGGCGGATGCGA +
Preference number: 4 (lower is better)
Translates to: RSQAPPTTQVLWSQPDRKLALSS*ISWRMR
Trigger: TCGCATCCGCCAGGAAATCCAGGAGCTCAAGGCGAG...CTTCCTGTCTGGTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp CCAGAGACTGCCGATGCAGGGTTTGCAGGTAGGCGGTCAAGTTGTGGATGCGCTGCTCTTAGAACCTGGTaGCCTTGCCTCCAGTTTGGT +
Preference number: 4 (lower is better)
Translates to: PETADAGFAGRRSSCGCAALRTW*PCLQFG
Trigger: ACCAAACTGGAGGCAAGGCCACCAGGTTCTAAGAGC...AGCGCATCCACAACTTGACCGCCTACCTGCAAACCCTGCATCGGCAGTCTCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CAA 72 bp ATGATCAGCATTAGCCAGAGACTGCCGATGCAGGGTTaGCAGGTAGGCGGTCAAGTTGTGGATGCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: MISISQRLPMQG*QVGGQVVDALG
Trigger: GCCCAGCGCATCCACAACTTGACCGCCTACCTGCAAACCCTGCATCGGCAGTCTCTGGCTAATGCTGATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213249.2
ENSMUST00000214510.2
CDS-3UTR TCA 90 bp TTGAGTCCTGAGGCTCCGGAACTGTGGTCATGTCTGCTACCATCTCTTCCTCAGCTGAGTCGCAGACAGTaGTGCCAGGAGGGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LSPEAPELWSCLLPSLPQLSRRQ*CQEGGK
Trigger: TTTGCCTCCCTCCTGGCATCACTGTCTGCGACTCAG...CTGAGGAAGAGATGGTAGCAGACATGACCACAGTTCCGGAGCCTCAGGACTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR TCA 90 bp CCGGAGCTCATCCTGTGCAATCTGCTGGCTCTGTTTCTGCAGTTTTTGGACCAGCTGAGTCGCAGACAGTaGTGCCAGGAGGGAGGCAAA +
Preference number: 4 (lower is better)
Translates to: PELILCNLLALFLQFLDQLSRRQ*CQEGGK
Trigger: TTTGCCTCCCTCCTGGCATCACTGTCTGCGACTCAG...CTGGTCCAAAAACTGCAGAAACAGAGCCAGCAGATTGCACAGGATGAGCTCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR TCA 90 bp GTGCATGATTCTCAGCCAGATAGAGGGCATGGGAGTAGTAGCCAGCCTGCCGGACTTGTCGGAGTTCTGTaGGTCCCTGCTGGTAAACTC +
Preference number: 4 (lower is better)
Translates to: VHDSQPDRGHGSSSQPAGLVGVL*VPAGKL
Trigger: GAGTTTACCAGCAGGGACTCACAGAACTCCGACAAG...TCCGGCAGGCTGGCTACTACTCCCATGCCCTCTATCTGGCTGAGAATCATGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213249.2
ENSMUST00000214510.2
CDS-3UTR TCA 90 bp CTGCCGATGCAGGGTTTGCAGGTAGGCGGTCAAGTTGTGGATGCGCTGGGCATCGGTCTCCATACTGCATaGAGATTTGAGCCAACCCAT +
Preference number: 4 (lower is better)
Translates to: LPMQGLQVGGQVVDALGIGLHTA*RFEPTH
Trigger: ATGGGTTGGCTCAAATCTTCATGCAGTATGGAGACC...GATGCCCAGCGCATCCACAACTTGACCGCCTACCTGCAAACCCTGCATCGGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213249.2
CDS-3UTR TCA 90 bp AACCTTCCCAGAGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACGAGATGGCCTCTGCATaGAGTTTCTCCTTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: NLPRGHRPHPLLKCYGANEMASA*SFSLAW
Trigger: CCAGGCCAAGGAGAAACTTCATGCAGAGGCCATCTC...GTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCTCTGGGAAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR TCA 90 bp ACAGGCAAGGAACTAGAACTCAGGACGTTCTTAGATATTTGTCACCTGAGGGCGTGCGGGCGAAGTAGCTaGGGGCCTGTTCCCACAGGG +
Preference number: 4 (lower is better)
Translates to: TGKELELRTFLDICHLRACGRSS*GPVPTG
Trigger: CCCTGTGGGAACAGGCCCTCAGCTACTTCGCCCGCA...CGCCCTCAGGTGACAAATATCTAAGAACGTCCTGAGTTCTAGTTCCTTGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR GCA 90 bp CCTTCCCAGAGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACCAGGGTGCAGAGTGGATTaGCACCGTCTCTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: PSQRSQAPPTTQVLWSQPGCRVD*HRLSFP
Trigger: TGGAAAAGAGAGACGGTGGCAATCCACTCTGCACCC...TGGTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCTCTGGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR GCA 90 bp ATTCTCAGCCAGATAGAGGGCATGGGAGTAGTAGCCAGCCTGCCGGAGGACCTTGGGTGCAGAGTGGATTaGCACCGTCTCTCTTTTCCA +
Preference number: 4 (lower is better)
Translates to: ILSQIEGMGVVASLPEDLGCRVD*HRLSFP
Trigger: TGGAAAAGAGAGACGGTGGCAATCCACTCTGCACCC...AAGGTCCTCCGGCAGGCTGGCTACTACTCCCATGCCCTCTATCTGGCTGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp AGGAGGAGGCAGGAAAAGCAGAGTCCCTTCTTGAGTCCTGAGGCTCCGGAACTGCAGCCCCATCATGGTTaGCCTTGCTGTAGAGATGGT +
Preference number: 4 (lower is better)
Translates to: RRRQEKQSPFLSPEAPELQPHHG*PCCRDG
Trigger: ACCATCTCTACAGCAAGGGCAACCATGATGGGGCTG...CAGTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCTTTTCCTGCCTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR GCA 90 bp ATAGAGGGCATGGGAGTAGTAGCCAGCCTGCCGGAGGACCTTGATGGCTGTCTCGTTCGGATATACTGCTaGACAGCCCCATCATGGTTG +
Preference number: 4 (lower is better)
Translates to: IEGMGVVASLPEDLDGCLVRIYC*TAPSWL
Trigger: CAACCATGATGGGGCTGTGCAGCAGTATATCCGAAC...GAGACAGCCATCAAGGTCCTCCGGCAGGCTGGCTACTACTCCCATGCCCTCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000213249.2
CDS-3UTR CCA 90 bp TCAGAACTGGCCTGGGACAGAGGGGAGAAGCAAGCATGGTGGCTAAGGAAGGTGACAAGACACAACAGTTaGCTCTGTCCCTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: SELAWDRGEKQAWWLRKVTRHNS*LCPWDG
Trigger: GCCATCCCAGGGACAGAGCCAACTGTTGTGTCTTGT...CACCTTCCTTAGCCACCATGCTTGCTTCTCCCCTCTGTCCCAGGCCAGTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR CCA 90 bp CTATGTATCAACACAGTGAACTTCTTAACCTTCCCAGAGGTCACAGGCCCCACCTTCTCCTGCAATGCGTaGACCCGCCCATCCCGCGTC +
Preference number: 4 (lower is better)
Translates to: LCINTVNFLTFPEVTGPTFSCNA*TRPSRV
Trigger: GACGCGGGATGGGCGGGTCCACGCATTGCAGGAGAA...GGTGGGGCCTGTGACCTCTGGGAAGGTTAAGAAGTTCACTGTGTTGATACATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp TCTCTTCCTCAGGCCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGCTTCCCAAGTTGTGGATGCGCTaGGCATCCAGAAACTTCCGG +
Preference number: 4 (lower is better)
Translates to: SLPQAYVCASEAQGYRLPKLWMR*ASRNFR
Trigger: CCGGAAGTTTCTGGATGCCCAGCGCATCCACAACTT...GGGAAGCCTATATCCCTGGGCCTCTGAAGCACAGACGTAGGCCTGAGGAAGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp GGCCTTCCTCACTGGTGTAGAAGAATCTATACTGCTGGTCAGCAGGAGGGACAGGTAGCTGTGGAGTTGTaGGCCAGGGTCTGCACCACT +
Preference number: 4 (lower is better)
Translates to: GLPHWCRRIYTAGQQEGQVAVEL*ARVCTT
Trigger: AGTGGTGCAGACCCTGGCCCACAACTCCACAGCTAC...CTGTCCCTCCTGCTGACCAGCAGTATAGATTCTTCTACACCAGTGAGGAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp CCCTTCTTGAGTCCTGAGGCTCCGGAACTGTGGTCATGTCTGCTACCATCTCTTTGGCCACACAGGAAGTaGACTGAGGGCAGCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PFLSPEAPELWSCLLPSLWPHRK*TEGSSK
Trigger: CTTGGAGCTGCCCTCAGTCCACTTCCTGTGTGGCCA...AAGAGATGGTAGCAGACATGACCACAGTTCCGGAGCCTCAGGACTCAAGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp TCCCAGAGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACCAGACCTCTCAAAGCAGTGTTaGTGGAAGGAGTGGCCACAC +
Preference number: 4 (lower is better)
Translates to: SQRSQAPPTTQVLWSQPDLSKQC*WKEWPH
Trigger: GTGTGGCCACTCCTTCCACCAACACTGCTTTGAGAG...GTCTGGTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCTCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
3UTR CAA 72 bp GGCAAAAGGAGGAGGCAGGAAAAGCAGAGTCCCTTCTaGAGTCCTGAGGCTCCGGAACTGTGGTCATGTCTG +
Preference number: 4 (lower is better)
Translates to: GKRRRQEKQSPF*SPEAPELWSCL
Trigger: CAGACATGACCACAGTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCTTTTCCTGCCTCCTCCTTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
3UTR CAA 72 bp TGCGTCTTGCTGTGCCGGTCCCGGGTAATATCTCCCTaGTTCAGGGTGACACTGCCATCTGTGAACCCAATG +
Preference number: 4 (lower is better)
Translates to: CVLLCRSRVISP*FRVTLPSVNPM
Trigger: CATTGGGTTCACAGATGGCAGTGTCACCCTGAACAAGGGAGATATTACCCGGGACCGGCACAGCAAGACGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
CDS-3UTR TCA 90 bp CCTTCCCAGAGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACCACATCCCCAGCAACAATaGACTGCAGGTCTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: PSQRSQAPPTTQVLWSQPHPQQQ*TAGLEK
Trigger: CTTCTCAAGACCTGCAGTTCATTGTTGCTGGGGATG...TGGTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCTCTGGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR TCA 90 bp AAGCAGAGTCCCTTCTTGAGTCCTGAGGCTCCGGAACTGTGGTCATGTCTGCTACCTGCCGGAGGACCTTaGTGGCTGTCTCTACATCAA +
Preference number: 4 (lower is better)
Translates to: KQSPFLSPEAPELWSCLLPAGGP*WLSLHQ
Trigger: TTGATGTAGAGACAGCCATCAAGGTCCTCCGGCAGG...TAGCAGACATGACCACAGTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR TCA 90 bp GCTGAGGTGGCCTTCCTCACTGGTGTAGAAGAATCTATACTGCTGGTCAGCAGGCCGGTATGTGGTGCATaGGGGTCTTGCCATAGCGTT +
Preference number: 4 (lower is better)
Translates to: AEVAFLTGVEESILLVSRPVCGA*GSCHSV
Trigger: AACGCTATGGCAAGACCCTCATGCACCACATACCGG...CCTGCTGACCAGCAGTATAGATTCTTCTACACCAGTGAGGAAGGCCACCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR TCA 90 bp CCCAGAGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACCAGACAGCATGTGGTAATGCATaGTCTGCTGGAACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: PRGHRPHPLLKCYGANQTACGNA*SAGTAS
Trigger: GGAAGCTGTTCCAGCAGATCATGCATTACCACATGC...TGTCTGGTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR TCA 90 bp ATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCTGGTGCCCTTGAGTAGATCTTTGGACTCGCCTTaGGCTCCTGGATTTCCTGGC +
Preference number: 4 (lower is better)
Translates to: IYRLWEQGPKHSLVPLSRSLDSP*APGFPG
Trigger: GCCAGGAAATCCAGGAGCTCAAGGCGAGTCCAAAGA...TCTACTCAAGGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR GCA 90 bp TTGAGTCCTGAGGCTCCGGAACTGTGGTCATGTCTGCTACCATCTCTTCCTCAGGGATTTCCTGGCGGATaGGAGTGGTCTCCTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LSPEAPELWSCLLPSLPQGFPGG*EWSPLC
Trigger: ACAGAGAGGAGACCACTCGCATCCGCCAGGAAATCC...CTGAGGAAGAGATGGTAGCAGACATGACCACAGTTCCGGAGCCTCAGGACTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp GGCCTTCCTCACTGGTGTAGAAGAATCTATACTGCTGGTCAGCAGGAGGGACAGGGAGGCAAAGGAACTTaGAAGCAGCGGATCCCGACA +
Preference number: 4 (lower is better)
Translates to: GLPHWCRRIYTAGQQEGQGGKGT*KQRIPT
Trigger: TGTCGGGATCCGCTGCTTCCAAGTTCCTTTGCCTCC...CTGTCCCTCCTGCTGACCAGCAGTATAGATTCTTCTACACCAGTGAGGAAGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR CCA 90 bp ACCTTCCCAGAGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACCGTCACGACAAACAAGTaGGTGGTCTTTCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: TFPEVTGPTHYSSVMEPTVTTNK*VVFPAW
Trigger: CCAAGCAGGAAAGACCACCCACTTGTTTGTCGTGAC...GGTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCTCTGGGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
3UTR CAA 72 bp GAGGGTCTTGCCATAGCGTTTCATGTTACTCTCCGCTaGCTCGAAAGGCAGCTTCCCGATATACCGAAGGGC +
Preference number: 4 (lower is better)
Translates to: EGLAIAFHVTLR*LERQLPDIPKG
Trigger: GCCCTTCGGTATATCGGGAAGCTGCCTTTCGAGCAAGCGGAGAGTAACATGAAACGCTATGGCAAGACCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CAA 72 bp AGTTGTCACGACAAACAAGTGGGTGGTCTTTCCTGCTaGGCGAAAGGCCAGCCCAGTAACGGGATAGTTGCC +
Preference number: 4 (lower is better)
Translates to: SCHDKQVGGLSC*AKGQPSNGIVA
Trigger: GGCAACTATCCCGTTACTGGGCTGGCCTTTCGCCAAGCAGGAAAGACCACCCACTTGTTTGTCGTGACAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
CDS-3UTR TCA 90 bp ATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCTGGTGCCCTTGAGTAGACTTGTCGGAGTTCTGTaGGTCCCTGCTGGTAAACTC +
Preference number: 4 (lower is better)
Translates to: IYRLWEQGPKHSLVPLSRLVGVL*VPAGKL
Trigger: GAGTTTACCAGCAGGGACTCACAGAACTCCGACAAG...TCTACTCAAGGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR TCA 90 bp ATAGAGGGCATGGGAGTAGTAGCCAGCCTGCCGGAGGACCTTGATGGCTGTCTCACAGGTCATAGATGTTaGGAATCTGCTTGTCGGAGT +
Preference number: 4 (lower is better)
Translates to: IEGMGVVASLPEDLDGCLTGHRC*ESACRS
Trigger: ACTCCGACAAGCAGATTCTCAACATCTATGACCTGT...GAGACAGCCATCAAGGTCCTCCGGCAGGCTGGCTACTACTCCCATGCCCTCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213249.2
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp TATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCTGGTGCCCTGTGTGTCCTTCTCCTaGAATGCGTGGACCCGCCCA +
Preference number: 4 (lower is better)
Translates to: YTFIYRLWEQGPKHSLVPCVSFS*NAWTRP
Trigger: TGGGCGGGTCCACGCATTGCAGGAGAAGGACACACA...GGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp AACCTTCCCAGAGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACTGGGTCGATAGTCAGTaGAGAGGCCTTTCAGCAACT +
Preference number: 4 (lower is better)
Translates to: NLPRGHRPHPLLKCYGANWVDSQ*RGLSAT
Trigger: AGTTGCTGAAAGGCCTCTGCACTGACTATCGACCCA...GTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCTCTGGGAAGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR GCA 90 bp ACAGGCAAGGAACTAGAACTCAGGACGTTCTTAGATATTTGTCACCTGAGGGCGCCGCCACATACTCCTTaGAGTCCTCCTCCTTGCGGG +
Preference number: 4 (lower is better)
Translates to: TGKELELRTFLDICHLRAPPHTP*SPPPCG
Trigger: CCCGCAAGGAGGAGGACTGCAAGGAGTATGTGGCGG...CGCCCTCAGGTGACAAATATCTAAGAACGTCCTGAGTTCTAGTTCCTTGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp TCTCTTCCTCAGGCCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGCTTCCCCCGGATCACATAGGATaGCTCCAACTTTCCAATGGT +
Preference number: 4 (lower is better)
Translates to: SLPQAYVCASEAQGYRLPPDHIG*LQLSNG
Trigger: ACCATTGGAAAGTTGGAGCCATCCTATGTGATCCGG...GGGAAGCCTATATCCCTGGGCCTCTGAAGCACAGACGTAGGCCTGAGGAAGAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp AGGCAGGAAAAGCAGAGTCCCTTCTTGAGTCCTGAGGCTCCGGAACTGTGGTCATGGAAGTCGTGCATCTaGCACAGAACCAATGCCTTG +
Preference number: 4 (lower is better)
Translates to: RQEKQSPFLSPEAPELWSWKSCI*HRTNAL
Trigger: CAAGGCATTGGTTCTGTGCCAGATGCACGACTTCCA...TGACCACAGTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCTTTTCCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
3UTR CAA 72 bp TCCTGGAAGTCGTGCATCTGGCACAGAACCAATGCCTaGTCAAACACGTCACAGAATCGGCCACTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: SWKSCIWHRTNA*SNTSQNRPLFS
Trigger: GCTGAAGAGTGGCCGATTCTGTGACGTGTTTGACAAGGCATTGGTTCTGTGCCAGATGCACGACTTCCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR TCA 90 bp GTTCAGAAGCAGGGTGGTATGATCAGCATTAGCCAGAGACTGCCGATGCAGGGTCAGCGCTGTAGGCTATaGACTTGTTGCACAGGTCAT +
Preference number: 4 (lower is better)
Translates to: VQKQGGMISISQRLPMQGQRCRL*TCCTGH
Trigger: ATGACCTGTGCAACAAGTTCATAGCCTACAGCGCTG...ACCCTGCATCGGCAGTCTCTGGCTAATGCTGATCATACCACCCTGCTTCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213249.2
ENSMUST00000214510.2
CDS-3UTR TCA 90 bp GATATACTGCTGCACAGCCCCATCATGGTTGCCCTTGCTGTAGAGATGGTCTCCCAGCGCTGTAGGCTATaGACTTGTTGCACAGGTCAT +
Preference number: 4 (lower is better)
Translates to: DILLHSPIMVALAVEMVSQRCRL*TCCTGH
Trigger: ATGACCTGTGCAACAAGTTCATAGCCTACAGCGCTG...GGAGACCATCTCTACAGCAAGGGCAACCATGATGGGGCTGTGCAGCAGTATATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR TCA 90 bp AGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACCAGACAGGAAGGGTCTCCATACTGCATaGAGATTTGAGCCAACCCAT +
Preference number: 4 (lower is better)
Translates to: RSQAPPTTQVLWSQPDRKGLHTA*RFEPTH
Trigger: ATGGGTTGGCTCAAATCTTCATGCAGTATGGAGACC...CTTCCTGTCTGGTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR GCA 90 bp TGTGAGTTTGAGGCCAGCCTGGTCTACATAATGAGTTATAAGCCGGCCGAGGATCAGGGAAAATCCGGGTaGAGAGTGGATTGCCACCGT +
Preference number: 4 (lower is better)
Translates to: CEFEASLVYIMSYKPAEDQGKSG*RVDCHR
Trigger: ACGGTGGCAATCCACTCTGCACCCGGATTTTCCCTG...ATCCTCGGCCGGCTTATAACTCATTATGTAGACCAGGCTGGCCTCAAACTCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp GGCAGCTCCAAGGCACTGTTACAGATGCTACACTTGGTCTTCTGGAAAATCTTTGTGGGTGGTCTTTCCTaGTTGGCGAAAGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GSSKALLQMLHLVFWKIFVGGLS*LAKGQP
Trigger: GGGCTGGCCTTTCGCCAAGCAGGAAAGACCACCCAC...AAAGATTTTCCAGAAGACCAAGTGTAGCATCTGTAACAGTGCCTTGGAGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp CCCTTCTTGAGTCCTGAGGCTCCGGAACTGTGGTCATGTCTGCTACCATCTCTTCCATCCTGGAAGTCGTaGATCTGGCACAGAACCAAT +
Preference number: 4 (lower is better)
Translates to: PFLSPEAPELWSCLLPSLPSWKS*IWHRTN
Trigger: ATTGGTTCTGTGCCAGATGCACGACTTCCAGGATGG...AAGAGATGGTAGCAGACATGACCACAGTTCCGGAGCCTCAGGACTCAAGAAGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp ATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCTGGTGCCCTGGAGGCAAAGGAACTTaGAAGCAGCGGATCCCGACA +
Preference number: 4 (lower is better)
Translates to: ILLFIGSGSKDPSTAWCPGGKGT*KQRIPT
Trigger: TGTCGGGATCCGCTGCTTCCAAGTTCCTTTGCCTCC...AGGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR CCA 90 bp GCTGAGGTGGCCTTCCTCACTGGTGTAGAAGAATCTATACTGCTGGTCAGCAGGCGACAAACAAGTGGGTaGTCTTTCCTGCTTGGCGAA +
Preference number: 4 (lower is better)
Translates to: AEVAFLTGVEESILLVSRRQTSG*SFLLGE
Trigger: TTCGCCAAGCAGGAAAGACCACCCACTTGTTTGTCG...CCTGCTGACCAGCAGTATAGATTCTTCTACACCAGTGAGGAAGGCCACCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR CCA 90 bp CACAGAATCGGCCACTCTTCAGCAGGGAGATGGCCTCTGCATGAAGTTTCTCCTCGACAAACAAGTGGGTaGTCTTTCCTGCTTGGCGAA +
Preference number: 4 (lower is better)
Translates to: HRIGHSSAGRWPLHEVSPRQTSG*SFLLGE
Trigger: TTCGCCAAGCAGGAAAGACCACCCACTTGTTTGTCG...AGGAGAAACTTCATGCAGAGGCCATCTCCCTGCTGAAGAGTGGCCGATTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR CCA 90 bp CTACCATCTCTTCCTCAGGCCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGTCTTCAGCAGGGAGATaGCCTCTGCATGAAGTTTCT +
Preference number: 4 (lower is better)
Translates to: LPSLPQAYVCASEAQGYRSSAGR*PLHEVS
Trigger: AGAAACTTCATGCAGAGGCCATCTCCCTGCTGAAGA...CCTATATCCCTGGGCCTCTGAAGCACAGACGTAGGCCTGAGGAAGAGATGGTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp TCTCTTCCTCAGGCCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGCTTCCCTCCTGTGCAATCTGCTaGCTCTGTTTCTGCAGTTTT +
Preference number: 4 (lower is better)
Translates to: SLPQAYVCASEAQGYRLPSCAIC*LCFCSF
Trigger: AAAACTGCAGAAACAGAGCCAGCAGATTGCACAGGA...GGGAAGCCTATATCCCTGGGCCTCTGAAGCACAGACGTAGGCCTGAGGAAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp CTCAGGAGACAGAGCAGGAGAATCTTTGTGAGTTTGAGGCCAGCCTGGTCTACACCAGCTCTTAGAACCTaGTGGCCTTGCCTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: LRRQSRRIFVSLRPAWSTPALRT*WPCLQF
Trigger: AAACTGGAGGCAAGGCCACCAGGTTCTAAGAGCTGG...TGTAGACCAGGCTGGCCTCAAACTCACAAAGATTCTCCTGCTCTGTCTCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR TCA 90 bp GGCTTTCAGCTCTCGTGGGTTGTTGGCAAAGATGGGGATGAACTCCTCAGAACTCATCCCCAGCAACAATaGACTGCAGGTCTTGAGAAG +
Preference number: 4 (lower is better)
Translates to: GFQLSWVVGKDGDELLRTHPQQQ*TAGLEK
Trigger: CTTCTCAAGACCTGCAGTTCATTGTTGCTGGGGATG...AGTTCTGAGGAGTTCATCCCCATCTTTGCCAACAACCCACGAGAGCTGAAAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR TCA 90 bp AGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACCAGACAGGAAGACAGGTCATAGATGTTaGGAATCTGCTTGTCGGAGT +
Preference number: 4 (lower is better)
Translates to: RSQAPPTTQVLWSQPDRKTGHRC*ESACRS
Trigger: ACTCCGACAAGCAGATTCTCAACATCTATGACCTGT...CTTCCTGTCTGGTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR TCA 90 bp CTCAGGAGACAGAGCAGGAGAATCTTTGTGAGTTTGAGGCCAGCCTGGTCTACAAGAAGCAGGGTGGTATaGTCAGCATTAGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LRRQSRRIFVSLRPAWSTRSRVV*SALARD
Trigger: GTCTCTGGCTAATGCTGATCATACCACCCTGCTTCT...TGTAGACCAGGCTGGCCTCAAACTCACAAAGATTCTCCTGCTCTGTCTCCTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR GCA 90 bp CCGCACCCGGAGCTCATCCTGTGCAATCTGCTGGCTCTGTTTCTGCAGTTTTTGATCCTCACCAACCGATaGCAGAATATTGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PHPELILCNLLALFLQFLILTNR*QNIVLL
Trigger: AAGCAGCACAATATTCTGGCATCGGTTGGTGAGGAT...CAAAAACTGCAGAAACAGAGCCAGCAGATTGCACAGGATGAGCTCCGGGTGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp TGCCATAGCGTTTCATGTTACTCTCCGCTTGCTCGAAAGGCAGCTTCCCGATATATCTGCGTCTTGCTGTaGCGGTCCCGGGTAATATCT +
Preference number: 4 (lower is better)
Translates to: CHSVSCYSPLARKAASRYICVLL*RSRVIS
Trigger: AGATATTACCCGGGACCGGCACAGCAAGACGCAGAT...ATATCGGGAAGCTGCCTTTCGAGCAAGCGGAGAGTAACATGAAACGCTATGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp CTTGAGCTTGGTATAGCAGTTCAGAAGCAGGGTGGTATGATCAGCATTAGCCAGCCCTTGTGCAAAATCTaGGTCTTGCTGTGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LELGIAVQKQGGMISISQPLCKI*VLLCRS
Trigger: GGACCGGCACAGCAAGACGCAGATTTTGCACAAGGG...CTGGCTAATGCTGATCATACCACCCTGCTTCTGAACTGCTATACCAAGCTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp ATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCTGGTGCCCTCCGGAGCTCATCCTGTaGAATCTGCTGGCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: ILLFIGSGSKDPSTAWCPPELIL*NLLALF
Trigger: AAACAGAGCCAGCAGATTGCACAGGATGAGCTCCGG...AGGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR TCA 90 bp GTTCAGAAGCAGGGTGGTATGATCAGCATTAGCCAGAGACTGCCGATGCAGGGTACAGGTCATAGATGTTaGGAATCTGCTTGTCGGAGT +
Preference number: 4 (lower is better)
Translates to: VQKQGGMISISQRLPMQGTGHRC*ESACRS
Trigger: ACTCCGACAAGCAGATTCTCAACATCTATGACCTGT...ACCCTGCATCGGCAGTCTCTGGCTAATGCTGATCATACCACCCTGCTTCTGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000213249.2
ENSMUST00000214510.2
CDS-3UTR TCA 90 bp GGTATAGCAGTTCAGAAGCAGGGTGGTATGATCAGCATTAGCCAGAGACTGCCGTACTGCATGAAGATTTaGGCCAACCCATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: GIAVQKQGGMISISQRLPYCMKI*ANPSLS
Trigger: GGACAGTGATGGGTTGGCTCAAATCTTCATGCAGTA...CGGCAGTCTCTGGCTAATGCTGATCATACCACCCTGCTTCTGAACTGCTATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213249.2
CDS-3UTR GCA 90 bp CCCTTCTTGAGTCCTGAGGCTCCGGAACTGTGGTCATGTCTGCTACCATCTCTTATCCTCACCAACCGATaGCAGAATATTGTGCTGCTT +
Preference number: 4 (lower is better)
Translates to: PFLSPEAPELWSCLLPSLILTNR*QNIVLL
Trigger: AAGCAGCACAATATTCTGGCATCGGTTGGTGAGGAT...AAGAGATGGTAGCAGACATGACCACAGTTCCGGAGCCTCAGGACTCAAGAAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp CATACTATTATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCGTGGGTGGTCTTTCCTaGTTGGCGAAAGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: HTIILLFIGSGSKDPSTAVGGLS*LAKGQP
Trigger: GGGCTGGCCTTTCGCCAAGCAGGAAAGACCACCCAC...GGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATAATAGTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp CTCAGGAGACAGAGCAGGAGAATCTTTGTGAGTTTGAGGCCAGCCTGGTCTACACATCATGGTTGCCCTTaGTGTAGAGATGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LRRQSRRIFVSLRPAWSTHHGCP*CRDGLH
Trigger: ATGGAGACCATCTCTACAGCAAGGGCAACCATGATG...TGTAGACCAGGCTGGCCTCAAACTCACAAAGATTCTCCTGCTCTGTCTCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR GCA 90 bp ATGATGTGCATGATTCTCAGCCAGATAGAGGGCATGGGAGTAGTAGCCAGCCTGCATCATGGTTGCCCTTaGTGTAGAGATGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: MMCMILSQIEGMGVVASLHHGCP*CRDGLH
Trigger: ATGGAGACCATCTCTACAGCAAGGGCAACCATGATG...CAGGCTGGCTACTACTCCCATGCCCTCTATCTGGCTGAGAATCATGCACATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213249.2
CDS-3UTR GCA 90 bp ACAGGCAAGGAACTAGAACTCAGGACGTTCTTAGATATTTGTCACCTGAGGGCGCGGTCAAGTTGTGGATaGGCTGGGCATCCAGAAACT +
Preference number: 4 (lower is better)
Translates to: TGKELELRTFLDICHLRARSSCG*AGHPET
Trigger: AGTTTCTGGATGCCCAGCGCATCCACAACTTGACCG...CGCCCTCAGGTGACAAATATCTAAGAACGTCCTGAGTTCTAGTTCCTTGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR GCA 90 bp TTGAGTCCTGAGGCTCCGGAACTGTGGTCATGTCTGCTACCATCTCTTCCTCAGAGGCACTGTTACAGATaGTACACTTGGTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LSPEAPELWSCLLPSLPQRHCYR*YTWSSG
Trigger: TCCAGAAGACCAAGTGTAGCATCTGTAACAGTGCCT...CTGAGGAAGAGATGGTAGCAGACATGACCACAGTTCCGGAGCCTCAGGACTCAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp GGTATAGCAGTTCAGAAGCAGGGTGGTATGATCAGCATTAGCCAGAGACTGCCGGGCAAGAACCAGATCTaGCCTTCCATATCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: GIAVQKQGGMISISQRLPGKNQI*PSISPK
Trigger: CTTTGGAGATATGGAAGGCCAGATCTGGTTCTTGCC...CGGCAGTCTCTGGCTAATGCTGATCATACCACCCTGCTTCTGAACTGCTATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR CCA 90 bp AGGAGGAGGCAGGAAAAGCAGAGTCCCTTCTTGAGTCCTGAGGCTCCGGAACTGAAGTTGAGATTCTCATaGACCGTCAAACAAGACACA +
Preference number: 4 (lower is better)
Translates to: RRRQEKQSPFLSPEAPELKLRFS*TVKQDT
Trigger: TGTGTCTTGTTTGACGGTCCATGAGAATCTCAACTT...CAGTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCTTTTCCTGCCTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR CCA 90 bp TGCCATAGCGTTTCATGTTACTCTCCGCTTGCTCGAAAGGCAGCTTCCCGATATGTCACGACAAACAAGTaGGTGGTCTTTCCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: CHSVSCYSPLARKAASRYVTTNK*VVFPAW
Trigger: CCAAGCAGGAAAGACCACCCACTTGTTTGTCGTGAC...ATATCGGGAAGCTGCCTTTCGAGCAAGCGGAGAGTAACATGAAACGCTATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR CCA 90 bp AGCCCCATCATGGTTGCCCTTGCTGTAGAGATGGTCTCCATACTGCATGAAGATTGCACGATGAGCTTATaGCCCTCAAAGGCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: SPIMVALAVEMVSILHEDCTMSL*PSKAKQ
Trigger: CTGCTTTGCCTTTGAGGGCCATAAGCTCATCGTGCA...ATCTTCATGCAGTATGGAGACCATCTCTACAGCAAGGGCAACCATGATGGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR CCA 90 bp TATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCTGGTGCCCTCTCGTTTCTGTTCCTaGGCCCGGATCATATCCATC +
Preference number: 4 (lower is better)
Translates to: YTFIYRLWEQGPKHSLVPSRFCS*ARIISI
Trigger: GATGGATATGATCCGGGCCCAGGAACAGAAACGAGA...GGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR TCA 90 bp GACAGGAAGACCACAGGCAAGGAACTAGAACTCAGGACGTTCTTAGATATTTGTATGAACTGCAGGTCTTaGGAAGGGTCGCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: DRKTTGKELELRTFLDICMNCRS*EGSLRA
Trigger: AGCCCTGAGCGACCCTTCTCAAGACCTGCAGTTCAT...ACAAATATCTAAGAACGTCCTGAGTTCTAGTTCCTTGCCTGTGGTCTTCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR TCA 90 bp ATTCTCAGCCAGATAGAGGGCATGGGAGTAGTAGCCAGCCTGCCGGAGGACCTTTCACTGTCCAAATGTTaGCTCTTAGCCAGATTAATT +
Preference number: 4 (lower is better)
Translates to: ILSQIEGMGVVASLPEDLSLSKC*LLARLI
Trigger: AATTAATCTGGCTAAGAGTCAACATTTGGACAGTGA...AAGGTCCTCCGGCAGGCTGGCTACTACTCCCATGCCCTCTATCTGGCTGAGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213249.2
CDS-3UTR TCA 90 bp CTATGTATCAACACAGTGAACTTCTTAACCTTCCCAGAGGTCACAGGCCCCACCTACTGCATGAAGATTTaGGCCAACCCATCACTGTCC +
Preference number: 4 (lower is better)
Translates to: LCINTVNFLTFPEVTGPTYCMKI*ANPSLS
Trigger: GGACAGTGATGGGTTGGCTCAAATCTTCATGCAGTA...GGTGGGGCCTGTGACCTCTGGGAAGGTTAAGAAGTTCACTGTGTTGATACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR GCA 90 bp CATACTATTATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCTGTGTGTCCTTCTCCTaGAATGCGTGGACCCGCCCA +
Preference number: 4 (lower is better)
Translates to: HTIILLFIGSGSKDPSTACVSFS*NAWTRP
Trigger: TGGGCGGGTCCACGCATTGCAGGAGAAGGACACACA...GGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATAATAGTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR GCA 90 bp TTCAGTCCTCATACTATTATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCAATCAGCAGGTCCCGCTaGAGTCCAGCCTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FSPHTIILLFIGSGSKDPISRSR*SPASRL
Trigger: CAGCCTGGAGGCTGGACTGCAGCGGGACCTGCTGAT...TGGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATAATAGTATGAGGACTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp CTATGTATCAACACAGTGAACTTCTTAACCTTCCCAGAGGTCACAGGCCCCACCGGCAAGAACCAGATCTaGCCTTCCATATCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LCINTVNFLTFPEVTGPTGKNQI*PSISPK
Trigger: CTTTGGAGATATGGAAGGCCAGATCTGGTTCTTGCC...GGTGGGGCCTGTGACCTCTGGGAAGGTTAAGAAGTTCACTGTGTTGATACATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp AGGCAGGAAAAGCAGAGTCCCTTCTTGAGTCCTGAGGCTCCGGAACTGTGGTCATTAATGTCCTCTAGCTaGATCTTCAAGTACCACTCA +
Preference number: 4 (lower is better)
Translates to: RQEKQSPFLSPEAPELWSLMSSS*IFKYHS
Trigger: TGAGTGGTACTTGAAGATCCAGCTAGAGGACATTAA...TGACCACAGTTCCGGAGCCTCAGGACTCAAGAAGGGACTCTGCTTTTCCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
3UTR CAA 72 bp ATCCTGTGCAATCTGCTGGCTCTGTTTCTGCAGTTTTaGGACCAGGTAATCTCGGATGATAGACAGGGTAGC +
Preference number: 4 (lower is better)
Translates to: ILCNLLALFLQF*DQVISDDRQGS
Trigger: GCTACCCTGTCTATCATCCGAGATTACCTGGTCCAAAAACTGCAGAAACAGAGCCAGCAGATTGCACAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
3UTR CAA 72 bp TTTGAGGCAAGGTCTCATTATGTAGTGAAGGCTGGCTaGAGAAATCGTTACCTGGACCAGGCTGGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: FEARSHYVVKAG*RNRYLDQAGLQ
Trigger: TTGAAGGCCAGCCTGGTCCAGGTAACGATTTCTCAAGCCAGCCTTCACTACATAATGAGACCTTGCCTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
CDS-3UTR CCA 90 bp CAGGAAGACCACAGGCAAGGAACTAGAACTCAGGACGTTCTTAGATATTTGTCAACAAGACACAACAGTTaGCTCTGTCCCTGGGATGGC +
Preference number: 4 (lower is better)
Translates to: QEDHRQGTRTQDVLRYLSTRHNS*LCPWDG
Trigger: GCCATCCCAGGGACAGAGCCAACTGTTGTGTCTTGT...TGACAAATATCTAAGAACGTCCTGAGTTCTAGTTCCTTGCCTGTGGTCTTCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR TCA 90 bp ATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCTGGTGCCCTTGAGTAGATCACTGTCCAAATGTTaGCTCTTAGCCAGATTAATT +
Preference number: 4 (lower is better)
Translates to: IYRLWEQGPKHSLVPLSRSLSKC*LLARLI
Trigger: AATTAATCTGGCTAAGAGTCAACATTTGGACAGTGA...TCTACTCAAGGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR GCA 90 bp AAGGAACTAGAACTCAGGACGTTCTTAGATATTTGTCACCTGAGGGCGAAGTGTGTTCGGATATACTGCTaGACAGCCCCATCATGGTTG +
Preference number: 4 (lower is better)
Translates to: KELELRTFLDICHLRAKCVRIYC*TAPSWL
Trigger: CAACCATGATGGGGCTGTGCAGCAGTATATCCGAAC...ACACTTCGCCCTCAGGTGACAAATATCTAAGAACGTCCTGAGTTCTAGTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR GCA 90 bp TATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCTGGTGCCCGTACCACTCATGATGTaGATGATTCTCAGCCAGATA +
Preference number: 4 (lower is better)
Translates to: YTFIYRLWEQGPKHSLVPVPLMM*MILSQI
Trigger: TATCTGGCTGAGAATCATGCACATCATGAGTGGTAC...GGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp GACAGGAAGACCACAGGCAAGGAACTAGAACTCAGGACGTTCTTAGATATTTGTTGCACGATGAGCTTATaGCCCTCAAAGGCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: DRKTTGKELELRTFLDICCTMSL*PSKAKQ
Trigger: CTGCTTTGCCTTTGAGGGCCATAAGCTCATCGTGCA...ACAAATATCTAAGAACGTCCTGAGTTCTAGTTCCTTGCCTGTGGTCTTCCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp TGCCATAGCGTTTCATGTTACTCTCCGCTTGCTCGAAAGGCAGCTTCCCGATATAAGTTGAGATTCTCATaGACCGTCAAACAAGACACA +
Preference number: 4 (lower is better)
Translates to: CHSVSCYSPLARKAASRYKLRFS*TVKQDT
Trigger: TGTGTCTTGTTTGACGGTCCATGAGAATCTCAACTT...ATATCGGGAAGCTGCCTTTCGAGCAAGCGGAGAGTAACATGAAACGCTATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR CCA 90 bp ATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCTGGTGCCCTGTCTCTACATCAAAGTaGACTTCACTCTCACTCTTT +
Preference number: 4 (lower is better)
Translates to: ILLFIGSGSKDPSTAWCPVSTSK*TSLSLF
Trigger: AAAGAGTGAGAGTGAAGTCCACTTTGATGTAGAGAC...AGGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp CTTTTTCAGTCCTCATACTATTATACTTTTATTTATAGGCTCTGGGAGCAAGGAGGCTCCTGCTCTCCATaGCGCTCACACACGGCAATC +
Preference number: 4 (lower is better)
Translates to: LFQSSYYYTFIYRLWEQGGSCSP*RSHTAI
Trigger: GATTGCCGTGTGTGAGCGCCATGGAGAGCAGGAGCC...TCCTTGCTCCCAGAGCCTATAAATAAAAGTATAATAGTATGAGGACTGAAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
3UTR CAA 72 bp GTGACACTGCCATCTGTGAACCCAATGGCCATAAAGTaGAGATTCTCATGGACCGTCAAACAAGACACAACA +
Preference number: 4 (lower is better)
Translates to: VTLPSVNPMAIK*RFSWTVKQDTT
Trigger: TGTTGTGTCTTGTTTGACGGTCCATGAGAATCTCAACTTTATGGCCATTGGGTTCACAGATGGCAGTGTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213740.2
CDS-3UTR CCA 90 bp TTTCAGTCCTCATACTATTATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCAGGCCTTTCAGCAACTaGGTTGTCTGCTCCGGTATG +
Preference number: 4 (lower is better)
Translates to: FQSSYYYTFIYRLWEQGPRPFSN*VVCSGM
Trigger: CATACCGGAGCAGACAACCCAGTTGCTGAAAGGCCT...GGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATAATAGTATGAGGACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CCA 90 bp AAGACCACAGGCAAGGAACTAGAACTCAGGACGTTCTTAGATATTTGTCACCTGCTACACTTGGTCTTCTaGAAAATCTTTGGACTCGCC +
Preference number: 4 (lower is better)
Translates to: KTTGKELELRTFLDICHLLHLVF*KIFGLA
Trigger: GGCGAGTCCAAAGATTTTCCAGAAGACCAAGTGTAG...CAGGTGACAAATATCTAAGAACGTCCTGAGTTCTAGTTCCTTGCCTGTGGTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR TCA 90 bp TTTCAGTCCTCATACTATTATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCGCTTCGAGCTGTCCTTaGGCTTGGTATAGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: FQSSYYYTFIYRLWEQGPASSCP*AWYSSS
Trigger: TGAACTGCTATACCAAGCTCAAGGACAGCTCGAAGC...GGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATAATAGTATGAGGACTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR TCA 90 bp CTTTTTCAGTCCTCATACTATTATACTTTTATTTATAGGCTCTGGGAGCAAGGACAGCGCTGTAGGCTATaGACTTGTTGCACAGGTCAT +
Preference number: 4 (lower is better)
Translates to: LFQSSYYYTFIYRLWEQGQRCRL*TCCTGH
Trigger: ATGACCTGTGCAACAAGTTCATAGCCTACAGCGCTG...TCCTTGCTCCCAGAGCCTATAAATAAAAGTATAATAGTATGAGGACTGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR TCA 90 bp TTTCAGTCCTCATACTATTATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCGTCAGCATCACTTTCTaGGTAACTCTCAAAGCAGTG +
Preference number: 4 (lower is better)
Translates to: FQSSYYYTFIYRLWEQGPVSITF*VTLKAV
Trigger: CACTGCTTTGAGAGTTACTCAGAAAGTGATGCTGAC...GGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATAATAGTATGAGGACTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR TCA 90 bp CTTTTTCAGTCCTCATACTATTATACTTTTATTTATAGGCTCTGGGAGCAAGGAGCAGAGTCAACTTGTTaGAAACCCCTCGGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: LFQSSYYYTFIYRLWEQGAESTC*KPLGQS
Trigger: ACTTTGGCCGAGGGGTTTTCAACAAGTTGACTCTGC...TCCTTGCTCCCAGAGCCTATAAATAAAAGTATAATAGTATGAGGACTGAAAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp AAGTTCCCCTCCTGGAGTGCATCAGCAGGTCCCGCTGCAGTCCAGCCTCCAGGCGGGAGGCAAAGGAACTaGGAAGCAGCGGATCCCGAC +
Preference number: 5 (lower is better)
Translates to: KFPSWSASAGPAAVQPPGGRQRN*EAADPD
Trigger: GTCGGGATCCGCTGCTTCCAAGTTCCTTTGCCTCCC...GCCTGGAGGCTGGACTGCAGCGGGACCTGCTGATGCACTCCAGGAGGGGAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR CAA 90 bp AAGTTCCCCTCCTGGAGTGCATCAGCAGGTCCCGCTGCAGTCCAGCCTCCAGGCGGTGGTCTTTCCTGCTaGGCGAAAGGCCAGCCCAGT +
Preference number: 5 (lower is better)
Translates to: KFPSWSASAGPAAVQPPGGGLSC*AKGQPS
Trigger: ACTGGGCTGGCCTTTCGCCAAGCAGGAAAGACCACC...GCCTGGAGGCTGGACTGCAGCGGGACCTGCTGATGCACTCCAGGAGGGGAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS CCA 90 bp TGGCCCGGCAGCTCAGAGCCTCCCGATCGCCTCGGCCTTCCAGACTaGGTCGATAGTCAGTGCAGAGGCCTTTCAGCAACTGGGTTGTCT +
Preference number: 5 (lower is better)
Translates to: WPGSSEPPDRLGLPD*VDSQCRGLSATGLS
Trigger: AGACAACCCAGTTGCTGAAAGGCCTCTGCACTGACTATCGACCCAGTCTGGAAGGCCGAGGCGATCGGGAGGCTCTGAGCTGCCGGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS CCA 90 bp GGCCTTGCCTCCAGTTTGGTCTGTGTGTCCTTCTCCTGCAATGCGTaGACCCGCCCATCCCGCGTCAGCACGTACAAGGAGCCCCACTCA +
Preference number: 5 (lower is better)
Translates to: GLASSLVCVSFSCNA*TRPSRVSTYKEPHS
Trigger: TGAGTGGGGCTCCTTGTACGTGCTGACGCGGGATGGGCGGGTCCACGCATTGCAGGAGAAGGACACACAGACCAAACTGGAGGCAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS TCA 90 bp CCATATCTCCAAAGACCAGGCTCCCGCGGCCTGAGTCGCAGACAGTaGTGCCAGGAGGGAGGCAAAGGAACTTGGAAGCAGCGGATCCCG +
Preference number: 5 (lower is better)
Translates to: PYLQRPGSRGLSRRQ*CQEGGKGTWKQRIP
Trigger: CGGGATCCGCTGCTTCCAAGTTCCTTTGCCTCCCTCCTGGCATCACTGTCTGCGACTCAGGCCGCGGGAGCCTGGTCTTTGGAGATATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR CAA 90 bp CTGCCGATGCAGGGTTTGCAGGTAGGCGGTCAAGTTGTGGATGCGCTGGGCATCCGGGTGCAGAGTGGATaGCCACCGTCTCTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: LPMQGLQVGGQVVDALGIRVQSG*PPSLFS
Trigger: GGAAAAGAGAGACGGTGGCAATCCACTCTGCACCCG...GATGCCCAGCGCATCCACAACTTGACCGCCTACCTGCAAACCCTGCATCGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS TCA 90 bp CTAGGAAGGCTTTCAGCTCTCGTGGGTTGTTGGCAAAGATGGGGATaGACTCCTCAGAACTGGCCCGGCAGCTCAGAGCCTCCCGATCGC +
Preference number: 5 (lower is better)
Translates to: LGRLSALVGCWQRWG*TPQNWPGSSEPPDR
Trigger: GCGATCGGGAGGCTCTGAGCTGCCGGGCCAGTTCTGAGGAGTTCATCCCCATCTTTGCCAACAACCCACGAGAGCTGAAAGCCTTCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp CCAGAGACTGCCGATGCAGGGTTTGCAGGTAGGCGGTCAAGTTGTGGATGCGCTTGCAAAATCTGCGTCTaGCTGTGCCGGTCCCGGGTA +
Preference number: 5 (lower is better)
Translates to: PETADAGFAGRRSSCGCACKICV*LCRSRV
Trigger: TACCCGGGACCGGCACAGCAAGACGCAGATTTTGCA...AGCGCATCCACAACTTGACCGCCTACCTGCAAACCCTGCATCGGCAGTCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR CAA 90 bp TCTCTTCCTCAGGCCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGCTTCCCGGTGGTCTTTCCTGCTaGGCGAAAGGCCAGCCCAGT +
Preference number: 5 (lower is better)
Translates to: SLPQAYVCASEAQGYRLPGGLSC*AKGQPS
Trigger: ACTGGGCTGGCCTTTCGCCAAGCAGGAAAGACCACC...GGGAAGCCTATATCCCTGGGCCTCTGAAGCACAGACGTAGGCCTGAGGAAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR CAA 90 bp CTGCCGATGCAGGGTTTGCAGGTAGGCGGTCAAGTTGTGGATGCGCTGGGCATCCGGGTAATATCTCCCTaGTTCAGGGTGACACTGCCA +
Preference number: 5 (lower is better)
Translates to: LPMQGLQVGGQVVDALGIRVISP*FRVTLP
Trigger: TGGCAGTGTCACCCTGAACAAGGGAGATATTACCCG...GATGCCCAGCGCATCCACAACTTGACCGCCTACCTGCAAACCCTGCATCGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR CAA 90 bp CAGCAACTGGGTTGTCTGCTCCGGTATGTGGTGCATGAGGGTCTTGCCATAGCGAATGAACTGCAGGTCTaGAGAAGGGTCGCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: QQLGCLLRYVVHEGLAIANELQV*RRVAQG
Trigger: GCCCTGAGCGACCCTTCTCAAGACCTGCAGTTCATT...CGCTATGGCAAGACCCTCATGCACCACATACCGGAGCAGACAACCCAGTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR CAA 90 bp CCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGCTTCCCCAGGAGCTGCCTAAGCTCTCGTGGGTTGTaGGCAAAGATGGGGATGAAC +
Preference number: 5 (lower is better)
Translates to: PTSVLQRPRDIGFPRSCLSSRGL*AKMGMN
Trigger: GTTCATCCCCATCTTTGCCAACAACCCACGAGAGCT...TAGGCAGCTCCTGGGGAAGCCTATATCCCTGGGCCTCTGAAGCACAGACGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp GAATCGGCCACTCTTCAGCAGGGAGATGGCCTCTGCATGAAGTTTCTCCTTGGCGGCCTTGCCTCCAGTTaGGTCTGTGTGTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ESATLQQGDGLCMKFLLGGLASS*VCVSFS
Trigger: GGAGAAGGACACACAGACCAAACTGGAGGCAAGGCC...GCCAAGGAGAAACTTCATGCAGAGGCCATCTCCCTGCTGAAGAGTGGCCGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR CAA 90 bp GCTGAGGTGGCCTTCCTCACTGGTGTAGAAGAATCTATACTGCTGGTCAGCAGGTGCAAAATCTGCGTCTaGCTGTGCCGGTCCCGGGTA +
Preference number: 5 (lower is better)
Translates to: AEVAFLTGVEESILLVSRCKICV*LCRSRV
Trigger: TACCCGGGACCGGCACAGCAAGACGCAGATTTTGCA...CCTGCTGACCAGCAGTATAGATTCTTCTACACCAGTGAGGAAGGCCACCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR CAA 90 bp GGCCTTCCTCACTGGTGTAGAAGAATCTATACTGCTGGTCAGCAGGAGGGACAGGCCTGCCGGAGGACCTaGATGGCTGTCTCTACATCA +
Preference number: 5 (lower is better)
Translates to: GLPHWCRRIYTAGQQEGQACRRT*MAVSTS
Trigger: TGATGTAGAGACAGCCATCAAGGTCCTCCGGCAGGC...CTGTCCCTCCTGCTGACCAGCAGTATAGATTCTTCTACACCAGTGAGGAAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp CTATGTATCAACACAGTGAACTTCTTAACCTTCCCAGAGGTCACAGGCCCCACCGCCGCCACATACTCCTaGCAGTCCTCCTCCTTGCGG +
Preference number: 5 (lower is better)
Translates to: LCINTVNFLTFPEVTGPTAATYS*QSSSLR
Trigger: CCGCAAGGAGGAGGACTGCAAGGAGTATGTGGCGGC...GGTGGGGCCTGTGACCTCTGGGAAGGTTAAGAAGTTCACTGTGTTGATACATAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp CTCTTCCTCAGGCCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGCTTCCCCGCACTTGAGCTGATGTaGGAACTGATCGTGGAGATC +
Preference number: 5 (lower is better)
Translates to: LFLRPTSVLQRPRDIGFPALELM*ELIVEI
Trigger: GATCTCCACGATCAGTTCCAACATCAGCTCAAGTGC...GGGGAAGCCTATATCCCTGGGCCTCTGAAGCACAGACGTAGGCCTGAGGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp ATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCTGGTGCCCTGGGAGGCAAAGGAACTaGGAAGCAGCGGATCCCGAC +
Preference number: 5 (lower is better)
Translates to: ILLFIGSGSKDPSTAWCPGRQRN*EAADPD
Trigger: GTCGGGATCCGCTGCTTCCAAGTTCCTTTGCCTCCC...AGGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR CAA 90 bp ATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCTGGTGCCCTTGAGTAGACATGTTACTCTCCGCTaGCTCGAAAGGCAGCTTCCC +
Preference number: 5 (lower is better)
Translates to: IYRLWEQGPKHSLVPLSRHVTLR*LERQLP
Trigger: GGGAAGCTGCCTTTCGAGCAAGCGGAGAGTAACATG...TCTACTCAAGGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp TTGAGTCCTGAGGCTCCGGAACTGTGGTCATGTCTGCTACCATCTCTTCCTCAGAACAAGACACAACAGTaGGCTCTGTCCCTGGGATGG +
Preference number: 5 (lower is better)
Translates to: LSPEAPELWSCLLPSLPQNKTQQ*ALSLGW
Trigger: CCATCCCAGGGACAGAGCCAACTGTTGTGTCTTGTT...CTGAGGAAGAGATGGTAGCAGACATGACCACAGTTCCGGAGCCTCAGGACTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR CAA 90 bp GCTGAGGTGGCCTTCCTCACTGGTGTAGAAGAATCTATACTGCTGGTCAGCAGGCTTTCAGCAACTGGGTaGTCTGCTCCGGTATGTGGT +
Preference number: 5 (lower is better)
Translates to: AEVAFLTGVEESILLVSRLSATG*SAPVCG
Trigger: ACCACATACCGGAGCAGACAACCCAGTTGCTGAAAG...CCTGCTGACCAGCAGTATAGATTCTTCTACACCAGTGAGGAAGGCCACCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp GGCCTTCCTCACTGGTGTAGAAGAATCTATACTGCTGGTCAGCAGGAGGGACAGTTCAGCTCTCGTGGGTaGTTGGCAAAGATGGGGATG +
Preference number: 5 (lower is better)
Translates to: GLPHWCRRIYTAGQQEGQFSSRG*LAKMGM
Trigger: CATCCCCATCTTTGCCAACAACCCACGAGAGCTGAA...CTGTCCCTCCTGCTGACCAGCAGTATAGATTCTTCTACACCAGTGAGGAAGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp CCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGCTTCCCCAGGAGCTGCCTAACTGAACATTTTCAGTaGTCACGACAAACAAGTGGG +
Preference number: 5 (lower is better)
Translates to: PTSVLQRPRDIGFPRSCLTEHFQ*SRQTSG
Trigger: CCCACTTGTTTGTCGTGACAACTGAAAATGTTCAGT...TAGGCAGCTCCTGGGGAAGCCTATATCCCTGGGCCTCTGAAGCACAGACGTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR CAA 90 bp CAGGAAGACCACAGGCAAGGAACTAGAACTCAGGACGTTCTTAGATATTTGTCAAGGGTAGCTGTGGAGTaGTGGGCCAGGGTCTGCACC +
Preference number: 5 (lower is better)
Translates to: QEDHRQGTRTQDVLRYLSRVAVE*WARVCT
Trigger: GGTGCAGACCCTGGCCCACAACTCCACAGCTACCCT...TGACAAATATCTAAGAACGTCCTGAGTTCTAGTTCCTTGCCTGTGGTCTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp AGGTCACAGGCCCCACCCACTACTCAAGTGTTATGGAGCCAACCAGACAGGAAGATACTGCATGAAGATTaGAGCCAACCCATCACTGTC +
Preference number: 5 (lower is better)
Translates to: RSQAPPTTQVLWSQPDRKILHED*SQPITV
Trigger: GACAGTGATGGGTTGGCTCAAATCTTCATGCAGTAT...CTTCCTGTCTGGTTGGCTCCATAACACTTGAGTAGTGGGTGGGGCCTGTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS TCA 90 bp GTTGCACAGGTCATAGATGTTGAGAATCTGCTTGTCGGAGTTCTGTaGGTCCCTGCTGGTAAACTCGGACCTGCACGGGAAAGAAAAGCA +
Preference number: 5 (lower is better)
Translates to: VAQVIDVENLLVGVL*VPAGKLGPARERKA
Trigger: TGCTTTTCTTTCCCGTGCAGGTCCGAGTTTACCAGCAGGGACTCACAGAACTCCGACAAGCAGATTCTCAACATCTATGACCTGTGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000214460.2
CDS-3UTR CAA 90 bp AAGGAACTAGAACTCAGGACGTTCTTAGATATTTGTCACCTGAGGGCGAAGTGTCGGGTGCAGAGTGGATaGCCACCGTCTCTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: KELELRTFLDICHLRAKCRVQSG*PPSLFS
Trigger: GGAAAAGAGAGACGGTGGCAATCCACTCTGCACCCG...ACACTTCGCCCTCAGGTGACAAATATCTAAGAACGTCCTGAGTTCTAGTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp TATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCTGGTGCCCAACAGCATCTCCAGTTaGGTCTGTGTGTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: YTFIYRLWEQGPKHSLVPNSISS*VCVSFS
Trigger: GGAGAAGGACACACAGACCAAACTGGAGATGCTGTT...GGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp CCTACGTCTGTGCTTCAGAGGCCCAGGGATATAGGCTTCCCCAGGAGCTGCCTAATCACTGTCCAAATGTaGACTCTTAGCCAGATTAAT +
Preference number: 5 (lower is better)
Translates to: PTSVLQRPRDIGFPRSCLITVQM*TLSQIN
Trigger: ATTAATCTGGCTAAGAGTCAACATTTGGACAGTGAT...TAGGCAGCTCCTGGGGAAGCCTATATCCCTGGGCCTCTGAAGCACAGACGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp ACAGGCAAGGAACTAGAACTCAGGACGTTCTTAGATATTTGTCACCTGAGGGCGATCATATCCATCACCTaGCGGTTCTCAGGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: TGKELELRTFLDICHLRAIISIT*RFSGRQ
Trigger: CTGCCTCCCTGAGAACCGCAAGGTGATGGATATGAT...CGCCCTCAGGTGACAAATATCTAAGAACGTCCTGAGTTCTAGTTCCTTGCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp CTCAGGAGACAGAGCAGGAGAATCTTTGTGAGTTTGAGGCCAGCCTGGTCTACAGCTACTTCTAGATGCTaGTGCCAGCTCTTAGAACCT +
Preference number: 5 (lower is better)
Translates to: LRRQSRRIFVSLRPAWSTATSRC*CQLLEP
Trigger: AGGTTCTAAGAGCTGGCACAAGCATCTAGAAGTAGC...TGTAGACCAGGCTGGCCTCAAACTCACAAAGATTCTCCTGCTCTGTCTCCTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS-3UTR CAA 90 bp GGTATAGCAGTTCAGAAGCAGGGTGGTATGATCAGCATTAGCCAGAGACTGCCGATACTGCATGAAGATTaGAGCCAACCCATCACTGTC +
Preference number: 5 (lower is better)
Translates to: GIAVQKQGGMISISQRLPILHED*SQPITV
Trigger: GACAGTGATGGGTTGGCTCAAATCTTCATGCAGTAT...CGGCAGTCTCTGGCTAATGCTGATCATACCACCCTGCTTCTGAACTGCTATACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213249.2
CDS-3UTR CAA 90 bp ATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCAAGCACAGCCTGGTGCCCTCTGTTTCTGCAGTTTTaGGACCAGGTAATCTCGGAT +
Preference number: 5 (lower is better)
Translates to: ILLFIGSGSKDPSTAWCPLFLQF*DQVISD
Trigger: ATCCGAGATTACCTGGTCCAAAAACTGCAGAAACAG...AGGGCACCAGGCTGTGCTTGGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp GACAGGAAGACCACAGGCAAGGAACTAGAACTCAGGACGTTCTTAGATATTTGTGTCAGCAGAGTCAACTaGTTGAAAACCCCTCGGCCA +
Preference number: 5 (lower is better)
Translates to: DRKTTGKELELRTFLDICVSRVN*LKTPRP
Trigger: TGGCCGAGGGGTTTTCAACAAGTTGACTCTGCTGAC...ACAAATATCTAAGAACGTCCTGAGTTCTAGTTCCTTGCCTGTGGTCTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp AAGACCACAGGCAAGGAACTAGAACTCAGGACGTTCTTAGATATTTGTCACCTGAGCAGAGTCAACTTGTaGAAAACCCCTCGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: KTTGKELELRTFLDICHLSRVNL*KTPRPK
Trigger: CTTTGGCCGAGGGGTTTTCAACAAGTTGACTCTGCT...CAGGTGACAAATATCTAAGAACGTCCTGAGTTCTAGTTCCTTGCCTGTGGTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp AAGACCACAGGCAAGGAACTAGAACTCAGGACGTTCTTAGATATTTGTCACCTGCCAATGGCCATAAAGTaGAGATTCTCATGGACCGTC +
Preference number: 5 (lower is better)
Translates to: KTTGKELELRTFLDICHLPMAIK*RFSWTV
Trigger: GACGGTCCATGAGAATCTCAACTTTATGGCCATTGG...CAGGTGACAAATATCTAAGAACGTCCTGAGTTCTAGTTCCTTGCCTGTGGTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp TTTCAGTCCTCATACTATTATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCAATGAACTGCAGGTCTaGAGAAGGGTCGCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: FQSSYYYTFIYRLWEQGPNELQV*RRVAQG
Trigger: GCCCTGAGCGACCCTTCTCAAGACCTGCAGTTCATT...GGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATAATAGTATGAGGACTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR CAA 90 bp GGTATAGCAGTTCAGAAGCAGGGTGGTATGATCAGCATTAGCCAGAGACTGCCGATCACTGTCCAAATGTaGACTCTTAGCCAGATTAAT +
Preference number: 5 (lower is better)
Translates to: GIAVQKQGGMISISQRLPITVQM*TLSQIN
Trigger: ATTAATCTGGCTAAGAGTCAACATTTGGACAGTGAT...CGGCAGTCTCTGGCTAATGCTGATCATACCACCCTGCTTCTGAACTGCTATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000213249.2
CDS-3UTR CAA 90 bp CTCAGGAGACAGAGCAGGAGAATCTTTGTGAGTTTGAGGCCAGCCTGGTCTACATTACAGATGCTACACTaGGTCTTCTGGAAAATCTTT +
Preference number: 5 (lower is better)
Translates to: LRRQSRRIFVSLRPAWSTLQMLH*VFWKIF
Trigger: AAAGATTTTCCAGAAGACCAAGTGTAGCATCTGTAA...TGTAGACCAGGCTGGCCTCAAACTCACAAAGATTCTCCTGCTCTGTCTCCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp TTTCAGTCCTCATACTATTATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCCGGGTAATATCTCCCTaGTTCAGGGTGACACTGCCA +
Preference number: 5 (lower is better)
Translates to: FQSSYYYTFIYRLWEQGPRVISP*FRVTLP
Trigger: TGGCAGTGTCACCCTGAACAAGGGAGATATTACCCG...GGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATAATAGTATGAGGACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR CAA 90 bp TTTCAGTCCTCATACTATTATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCACTCTCAAAGCAGTGTaGGTGGAAGGAGTGGCCACA +
Preference number: 5 (lower is better)
Translates to: FQSSYYYTFIYRLWEQGPTLKAV*VEGVAT
Trigger: TGTGGCCACTCCTTCCACCAACACTGCTTTGAGAGT...GGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATAATAGTATGAGGACTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS-3UTR CAA 90 bp CTTTTTCAGTCCTCATACTATTATACTTTTATTTATAGGCTCTGGGAGCAAGGACCAATGGCCATAAAGTaGAGATTCTCATGGACCGTC +
Preference number: 5 (lower is better)
Translates to: LFQSSYYYTFIYRLWEQGPMAIK*RFSWTV
Trigger: GACGGTCCATGAGAATCTCAACTTTATGGCCATTGG...TCCTTGCTCCCAGAGCCTATAAATAAAAGTATAATAGTATGAGGACTGAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS-3UTR CAA 90 bp TTCAGTCCTCATACTATTATACTTTTATTTATAGGCTCTGGGAGCAAGGACCCAACTGAACATTTTCAGTaGTCACGACAAACAAGTGGG +
Preference number: 5 (lower is better)
Translates to: FSPHTIILLFIGSGSKDPTEHFQ*SRQTSG
Trigger: CCCACTTGTTTGTCGTGACAACTGAAAATGTTCAGT...TGGGTCCTTGCTCCCAGAGCCTATAAATAAAAGTATAATAGTATGAGGACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS TCA 72 bp CAAAGACCAGGCTCCCGCGGCCTGAGTCGCAGACAGTaGTGCCAGGAGGGAGGCAAAGGAACTTGGAAGCAG +
Preference number: 6 (lower is better)
Translates to: QRPGSRGLSRRQ*CQEGGKGTWKQ
Trigger: CTGCTTCCAAGTTCCTTTGCCTCCCTCCTGGCATCACTGTCTGCGACTCAGGCCGCGGGAGCCTGGTCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000034644.10
ENSMUST00000214510.2
CDS GCA 72 bp TGCCTCCAGTTTGGTCTGTGTGTCCTTCTCCTGCAATaGGTGGACCCGCCCATCCCGCGTCAGCACGTACAA +
Preference number: 6 (lower is better)
Translates to: CLQFGLCVLLLQ*VDPPIPRQHVQ
Trigger: TTGTACGTGCTGACGCGGGATGGGCGGGTCCACGCATTGCAGGAGAAGGACACACAGACCAAACTGGAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS CAA 90 bp AGATGCTTGTGCCAGCTCTTAGAACCTGGTGGCCTTGCCTCCAGTTaGGTCTGTGTGTCCTTCTCCTGCAATGCGTGGACCCGCCCATCC +
Preference number: 6 (lower is better)
Translates to: RCLCQLLEPGGLASS*VCVSFSCNAWTRPS
Trigger: GGATGGGCGGGTCCACGCATTGCAGGAGAAGGACACACAGACCAAACTGGAGGCAAGGCCACCAGGTTCTAAGAGCTGGCACAAGCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS TCA 72 bp CTTTCAGCTCTCGTGGGTTGTTGGCAAAGATGGGGATaGACTCCTCAGAACTGGCCCGGCAGCTCAGAGCCT +
Preference number: 6 (lower is better)
Translates to: LSALVGCWQRWG*TPQNWPGSSEP
Trigger: AGGCTCTGAGCTGCCGGGCCAGTTCTGAGGAGTTCATCCCCATCTTTGCCAACAACCCACGAGAGCTGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS CAA 90 bp ACCTCACTCATGTGTTCTAGGAAGGCTTTCAGCTCTCGTGGGTTGTaGGCAAAGATGGGGATGAACTCCTCAGAACTGGCCCGGCAGCTC +
Preference number: 6 (lower is better)
Translates to: TSLMCSRKAFSSRGL*AKMGMNSSELARQL
Trigger: GAGCTGCCGGGCCAGTTCTGAGGAGTTCATCCCCATCTTTGCCAACAACCCACGAGAGCTGAAAGCCTTCCTAGAACACATGAGTGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS CAA 90 bp TGCACCTCACTCATGTGTTCTAGGAAGGCTTTCAGCTCTCGTGGGTaGTTGGCAAAGATGGGGATGAACTCCTCAGAACTGGCCCGGCAG +
Preference number: 6 (lower is better)
Translates to: CTSLMCSRKAFSSRG*LAKMGMNSSELARQ
Trigger: CTGCCGGGCCAGTTCTGAGGAGTTCATCCCCATCTTTGCCAACAACCCACGAGAGCTGAAAGCCTTCCTAGAACACATGAGTGAGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000034644.10
CDS TCA 72 bp GTCATAGATGTTGAGAATCTGCTTGTCGGAGTTCTGTaGGTCCCTGCTGGTAAACTCGGACCTGCACGGGAA +
Preference number: 6 (lower is better)
Translates to: VIDVENLLVGVL*VPAGKLGPARE
Trigger: TTCCCGTGCAGGTCCGAGTTTACCAGCAGGGACTCACAGAACTCCGACAAGCAGATTCTCAACATCTATGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214460.2
CDS CAA 72 bp CCTAAGAAACCTATTCCTGGAGCTACTTCTAGATGCTaGTGCCAGCTCTTAGAACCTGGTGGCCTTGCCTCC +
Preference number: 6 (lower is better)
Translates to: PKKPIPGATSRC*CQLLEPGGLAS
Trigger: GGAGGCAAGGCCACCAGGTTCTAAGAGCTGGCACAAGCATCTAGAAGTAGCTCCAGGAATAGGTTTCTTAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2
CDS GCA 72 bp AAGAAACCTATTCCTGGAGCTACTTCTAGATGCTTGTaGCAGCTCTTAGAACCTGGTGGCCTTGCCTCCAGT +
Preference number: 6 (lower is better)
Translates to: KKPIPGATSRCL*QLLEPGGLASS
Trigger: ACTGGAGGCAAGGCCACCAGGTTCTAAGAGCTGGCACAAGCATCTAGAAGTAGCTCCAGGAATAGGTTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000214510.2