Pregenerated sensors for VOPP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037788Ensembl transcript IDs: ENSMUST00000114297.5, ENSMUST00000127485.8, ENSMUST00000145608.7
Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGTGTGCCTGGGAGCACAGCAGTGTTCCTAGTAGCAGAGCAGTGTaGCTGGGAGCACAGCAGCATGACTGGGAGCACAGCAGTGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: WCAWEHSSVPSSRAV*LGAQQHDWEHSSVP Trigger: AGGCACACTGCTGTGCTCCCAGTCATGCTGCTGTGCTCCCAGGCACACTGCTCTGCTACTAGGAACACTGCTGTGCTCCCAGGCACACCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR CCA 90 bp | ATGACTGGGAGCAGAGCAGCGTTCTTGGGAGCACAGCAACGTGACTaGGAGCAGAGAAGCATATCTGGGAGCACAGCAGTGTGGCTGGAA | + |
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Preference number: 1 (lower is better) Translates to: MTGSRAAFLGAQQRD*EQRSISGSTAVWLE Trigger: TTCCAGCCACACTGCTGTGCTCCCAGATATGCTTCTCTGCTCCCAGTCACGTTGCTGTGCTCCCAAGAACGCTGCTCTGCTCCCAGTCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR CCA 90 bp | CAACGTGACTGGGAGCAGAGAAGCATATCTGGGAGCACAGCAGTGTaGCTGGAAATCCAGCAGTGTGCCTGGGAGCACAGTGGTGTGAAT | + |
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Preference number: 1 (lower is better) Translates to: QRDWEQRSISGSTAV*LEIQQCAWEHSGVN Trigger: ATTCACACCACTGTGCTCCCAGGCACACTGCTGGATTTCCAGCCACACTGCTGTGCTCCCAGATATGCTTCTCTGCTCCCAGTCACGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR GCA 90 bp | CAAGTGTTGCCAAGAAAGAGCATGCACAAGTCTGCCTCATGTCTGTaGCCAAGCCCCGGCTCTACAGGACCTCAGCACACAGAAGTAGAG | + |
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Preference number: 1 (lower is better) Translates to: QVLPRKSMHKSASCL*PSPGSTGPQHTEVE Trigger: CTCTACTTCTGTGTGCTGAGGTCCTGTAGAGCCGGGGCTTGGGCACAGACATGAGGCAGACTTGTGCATGCTCTTTCTTGGCAACACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
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| 3UTR GCA 90 bp | TCTCCTCTGGCAATACTCGGATACCACAGGGCACTCAAGGTGAGCTaGACAGACCAAAGTGTGGCTCTCAGTTTATCACCTGCTCACCAC | + |
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Preference number: 1 (lower is better) Translates to: SPLAILGYHRALKVS*TDQSVALSLSPAHH Trigger: GTGGTGAGCAGGTGATAAACTGAGAGCCACACTTTGGTCTGTGCAGCTCACCTTGAGTGCCCTGTGGTATCCGAGTATTGCCAGAGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR TCA 90 bp | TGCATTCTCCTCTGGCAATACTCGGATACCACAGGGCACTCAAGGTaGGCTGCACAGACCAAAGTGTGGCTCTCAGTTTATCACCTGCTC | + |
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Preference number: 1 (lower is better) Translates to: CILLWQYSDTTGHSR*AAQTKVWLSVYHLL Trigger: GAGCAGGTGATAAACTGAGAGCCACACTTTGGTCTGTGCAGCTCACCTTGAGTGCCCTGTGGTATCCGAGTATTGCCAGAGGAGAATGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR GCA 90 bp | AAGAAATATGAGCCAAGTGTTGCCAAGAAAGAGCATGCACAAGTCTaGCTCATGTCTGTGCCCAAGCCCCGGCTCTACAGGACCTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: KKYEPSVAKKEHAQV*LMSVPKPRLYRTSA Trigger: TGCTGAGGTCCTGTAGAGCCGGGGCTTGGGCACAGACATGAGGCAGACTTGTGCATGCTCTTTCTTGGCAACACTTGGCTCATATTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
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| 3UTR GCA 90 bp | AAGCATATCTGGGAGCACAGCAGTGTGGCTGGAAATCCAGCAGTGTaGCTGGGAGCACAGTGGTGTGAATGCAATCAACATATTGGCCCT | + |
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Preference number: 1 (lower is better) Translates to: KHIWEHSSVAGNPAV*LGAQWCECNQHIGP Trigger: AGGGCCAATATGTTGATTGCATTCACACCACTGTGCTCCCAGGCACACTGCTGGATTTCCAGCCACACTGCTGTGCTCCCAGATATGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR CCA 90 bp | TTATACAGAGCAGGAACCTGGAGGCAGGAACTGATGCAGAGGTCATaGAGGAGTGCTGCTTACTGGTGTGTTCCTTATGGCTTGCTCAGC | + |
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Preference number: 1 (lower is better) Translates to: LYRAGTWRQELMQRS*RSAAYWCVPYGLLS Trigger: GCTGAGCAAGCCATAAGGAACACACCAGTAAGCAGCACTCCTCCATGACCTCTGCATCAGTTCCTGCCTCCAGGTTCCTGCTCTGTATAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR TCA 90 bp | ATCAGGACAGGAACTTATACAGAGCAGGAACCTGGAGGCAGGAACTaGTGCAGAGGTCATGGAGGAGTGCTGCTTACTGGTGTGTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: IRTGTYTEQEPGGRN*CRGHGGVLLTGVFL Trigger: AAGGAACACACCAGTAAGCAGCACTCCTCCATGACCTCTGCATCAGTTCCTGCCTCCAGGTTCCTGCTCTGTATAAGTTCCTGTCCTGAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR CCA 90 bp | ATATCTGGGAGCACAGCAGTGTGGCTGGAAATCCAGCAGTGTGCCTaGGAGCACAGTGGTGTGAATGCAATCAACATATTGGCCCTCAAA | + |
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Preference number: 1 (lower is better) Translates to: ISGSTAVWLEIQQCA*EHSGVNAINILALK Trigger: TTTGAGGGCCAATATGTTGATTGCATTCACACCACTGTGCTCCCAGGCACACTGCTGGATTTCCAGCCACACTGCTGTGCTCCCAGATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR GCA 90 bp | CAGCTTGCAACCACCACTGACTCCGAATTATTATTGAGTCAGTGCTaGTCCCATTCGCCCTTTCTCATGACCCTCTTCATGCTGAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: QLATTTDSELLLSQC*SHSPFLMTLFMLRQ Trigger: TTGCCTCAGCATGAAGAGGGTCATGAGAAAGGGCGAATGGGAGCAGCACTGACTCAATAATAATTCGGAGTCAGTGGTGGTTGCAAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
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| 3UTR GCA 90 bp | AGAGGTCATGGAGGAGTGCTGCTTACTGGTGTGTTCCTTATGGCTTaGTCAGCCTGCTTTCTTACAGAATTCAGGACACAAGCTCAGGGA | + |
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Preference number: 1 (lower is better) Translates to: RGHGGVLLTGVFLMA*SACFLTEFRTQAQG Trigger: TCCCTGAGCTTGTGTCCTGAATTCTGTAAGAAAGCAGGCTGAGCAAGCCATAAGGAACACACCAGTAAGCAGCACTCCTCCATGACCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR CCA 90 bp | CTAGCTCTAACTCAGCAATGCTGGTCTTGCTTTGCTGAGTTTCTTTaGCTGTCCTCTTCCTCTCCAAGGGTCAATGTAACTACCCGGCCT | + |
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Preference number: 1 (lower is better) Translates to: LALTQQCWSCFAEFL*LSSSSPRVNVTTRP Trigger: AGGCCGGGTAGTTACATTGACCCTTGGAGAGGAAGAGGACAGCCAAAGAAACTCAGCAAAGCAAGACCAGCATTGCTGAGTTAGAGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
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| 3UTR CCA 90 bp | GATGCAGAGGTCATGGAGGAGTGCTGCTTACTGGTGTGTTCCTTATaGCTTGCTCAGCCTGCTTTCTTACAGAATTCAGGACACAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: DAEVMEECCLLVCSL*LAQPAFLQNSGHKL Trigger: GAGCTTGTGTCCTGAATTCTGTAAGAAAGCAGGCTGAGCAAGCCATAAGGAACACACCAGTAAGCAGCACTCCTCCATGACCTCTGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR CCA 90 bp | TGGAGGCAGGAACTGATGCAGAGGTCATGGAGGAGTGCTGCTTACTaGTGTGTTCCTTATGGCTTGCTCAGCCTGCTTTCTTACAGAATT | + |
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Preference number: 1 (lower is better) Translates to: WRQELMQRSWRSAAY*CVPYGLLSLLSYRI Trigger: AATTCTGTAAGAAAGCAGGCTGAGCAAGCCATAAGGAACACACCAGTAAGCAGCACTCCTCCATGACCTCTGCATCAGTTCCTGCCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR GCA 90 bp | TTGGGATCACATACAACCCTAGCTCTAACTCAGCAATGCTGGTCTTaGTTTGCTGAGTTTCTTTGGCTGTCCTCTTCCTCTCCAAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: LGSHTTLALTQQCWS*FAEFLWLSSSSPRV Trigger: GACCCTTGGAGAGGAAGAGGACAGCCAAAGAAACTCAGCAAAGCAAGACCAGCATTGCTGAGTTAGAGCTAGGGTTGTATGTGATCCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
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| 3UTR GCA 90 bp | CCAGATACACTAGCATGTATGGAGCCTAGTTGCTCTTACAGTTCTTaGTTCTTTCCTGAGCCTCTTGGGCCCTCCTGCTACAATCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: PDTLACMEPSCSYSS*FFPEPLGPSCYNLP Trigger: AGGAAGATTGTAGCAGGAGGGCCCAAGAGGCTCAGGAAAGAAGCAAGAACTGTAAGAGCAACTAGGCTCCATACATGCTAGTGTATCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
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| 3UTR TCA 90 bp | GAAGTTCACTGCCAACTACTGCATCATGTGAGTCTTATCTCAGCCTaGCCACTTTATCTGCCCCCTAACACACAGGCTATGCCTTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: EVHCQLLHHVSLISA*PLYLPPNTQAMPSF Trigger: AAAGGAAGGCATAGCCTGTGTGTTAGGGGGCAGATAAAGTGGTCAGGCTGAGATAAGACTCACATGATGCAGTAGTTGGCAGTGAACTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
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| 3UTR TCA 90 bp | GTGGATAGTGTCTCTTCGAAGTTCACTGCCAACTACTGCATCATGTaGGTCTTATCTCAGCCTGACCACTTTATCTGCCCCCTAACACAC | + |
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Preference number: 1 (lower is better) Translates to: VDSVSSKFTANYCIM*VLSQPDHFICPLTH Trigger: GTGTGTTAGGGGGCAGATAAAGTGGTCAGGCTGAGATAAGACTCACATGATGCAGTAGTTGGCAGTGAACTTCGAAGAGACACTATCCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
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| 3UTR GCA 90 bp | GTCATCGCCAGGCCTTTATTCCCTGTGTGTGCTGATGGTTGCTGTTaGCCTGAAGCTGATCTGCTGTCTCTTCTACTTTACTTTCAATCT | + |
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Preference number: 1 (lower is better) Translates to: VIARPLFPVCADGCC*PEADLLSLLLYFQS Trigger: AGATTGAAAGTAAAGTAGAAGAGACAGCAGATCAGCTTCAGGGCAACAGCAACCATCAGCACACACAGGGAATAAAGGCCTGGCGATGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
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| 3UTR CCA 90 bp | TCTCTGTTGGGATCACATACAACCCTAGCTCTAACTCAGCAATGCTaGTCTTGCTTTGCTGAGTTTCTTTGGCTGTCCTCTTCCTCTCCA | + |
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Preference number: 1 (lower is better) Translates to: SLLGSHTTLALTQQC*SCFAEFLWLSSSSP Trigger: TGGAGAGGAAGAGGACAGCCAAAGAAACTCAGCAAAGCAAGACCAGCATTGCTGAGTTAGAGCTAGGGTTGTATGTGATCCCAACAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
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| 3UTR CCA 90 bp | CACAGCAGTGTGGCTGGAAATCCAGCAGTGTGCCTGGGAGCACAGTaGTGTGAATGCAATCAACATATTGGCCCTCAAATTTATGAAACA | + |
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Preference number: 1 (lower is better) Translates to: HSSVAGNPAVCLGAQ*CECNQHIGPQIYET Trigger: TGTTTCATAAATTTGAGGGCCAATATGTTGATTGCATTCACACCACTGTGCTCCCAGGCACACTGCTGGATTTCCAGCCACACTGCTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR TCA 90 bp | ACATACAACCCTAGCTCTAACTCAGCAATGCTGGTCTTGCTTTGCTaGGTTTCTTTGGCTGTCCTCTTCCTCTCCAAGGGTCAATGTAAC | + |
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Preference number: 1 (lower is better) Translates to: TYNPSSNSAMLVLLC*VSLAVLFLSKGQCN Trigger: GTTACATTGACCCTTGGAGAGGAAGAGGACAGCCAAAGAAACTCAGCAAAGCAAGACCAGCATTGCTGAGTTAGAGCTAGGGTTGTATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
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| 3UTR TCA 90 bp | GAGACAGGGTTTATTGCTTTCAAAAACAAGACATGTGAGTGGCCATaGTGCATTCTCCTCTGGCAATACTCGGATACCACAGGGCACTCA | + |
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Preference number: 1 (lower is better) Translates to: ETGFIAFKNKTCEWP*CILLWQYSDTTGHS Trigger: TGAGTGCCCTGTGGTATCCGAGTATTGCCAGAGGAGAATGCATCATGGCCACTCACATGTCTTGTTTTTGAAAGCAATAAACCCTGTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR TCA 90 bp | GGAACTAATCACTCTATAACAAATGAAACATTCGCTTCTCAAGAATaGGGAATGGAGGTGGTCACGAGGCTGTGGAGGATGAGGAACAGG | + |
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Preference number: 1 (lower is better) Translates to: GTNHSITNETFASQE*GMEVVTRLWRMRNR Trigger: CCTGTTCCTCATCCTCCACAGCCTCGTGACCACCTCCATTCCTCATTCTTGAGAAGCGAATGTTTCATTTGTTATAGAGTGATTAGTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
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| 3UTR GCA 90 bp | AGCATGACCAAAGCCACTTCAGGAGGAAAGGCTTTGTTCAGCTTATaGTTCCATATCACAGTTCATCACCAAAGGCAATCAGGACAGGAA | + |
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Preference number: 1 (lower is better) Translates to: SMTKATSGGKALFSL*FHITVHHQRQSGQE Trigger: TTCCTGTCCTGATTGCCTTTGGTGATGAACTGTGATATGGAAGCATAAGCTGAACAAAGCCTTTCCTCCTGAAGTGGCTTTGGTCATGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR TCA 90 bp | CAAAGTTCCAGAGACAGGGTTTATTGCTTTCAAAAACAAGACATGTaGGTGGCCATGATGCATTCTCCTCTGGCAATACTCGGATACCAC | + |
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Preference number: 1 (lower is better) Translates to: QSSRDRVYCFQKQDM*VAMMHSPLAILGYH Trigger: GTGGTATCCGAGTATTGCCAGAGGAGAATGCATCATGGCCACTCACATGTCTTGTTTTTGAAAGCAATAAACCCTGTCTCTGGAACTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR GCA 90 bp | AGTCCATCACTTTTCTGTTCTTACATGAAAGAAGTTACTAAGGACTaGTGTGTGCTGTACCAGGAAACACAAGAGCTGTGCCTAGCTACC | + |
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Preference number: 1 (lower is better) Translates to: SPSLFCSYMKEVTKD*CVLYQETQELCLAT Trigger: GGTAGCTAGGCACAGCTCTTGTGTTTCCTGGTACAGCACACAGCAGTCCTTAGTAACTTCTTTCATGTAAGAACAGAAAAGTGATGGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
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| 3UTR TCA 90 bp | TCAAATGTCCTCCACAAAAGACTTGAAAGAGAGCTGGGCTTGCTTTaGGAATATCCAAGTTTTCCCTTGGACCACCCTATCAGCAAGTAT | + |
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Preference number: 1 (lower is better) Translates to: SNVLHKRLERELGLL*EYPSFPLDHPISKY Trigger: ATACTTGCTGATAGGGTGGTCCAAGGGAAAACTTGGATATTCTCAAAGCAAGCCCAGCTCTCTTTCAAGTCTTTTGTGGAGGACATTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
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| 3UTR TCA 90 bp | GGGACATATACCCAGAAGTGCAATTTCCATAGGCATTGTCAGTGTTaGCGTCAGAAGGAATTCCAATGTGGGCTCAATGGCAAACAAAAT | + |
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Preference number: 1 (lower is better) Translates to: GTYTQKCNFHRHCQC*RQKEFQCGLNGKQN Trigger: ATTTTGTTTGCCATTGAGCCCACATTGGAATTCCTTCTGACGTCAACACTGACAATGCCTATGGAAATTGCACTTCTGGGTATATGTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
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| 3UTR TCA 90 bp | TTACTTAATCCCTCGATGCTATTTGATGATGAAGTACTAAACCTCTaGGGCCAATACTGCAGTTTCTGGCTTCAGAGGAATTCAGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: LLNPSMLFDDEVLNL*GQYCSFWLQRNSGR Trigger: CCTGCCTGAATTCCTCTGAAGCCAGAAACTGCAGTATTGGCCTCAGAGGTTTAGTACTTCATCATCAAATAGCATCGAGGGATTAAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR GCA 90 bp | ATGTTTGGACCATGTAGTCGTCTTGATTGTAAACAGCAGACATTGTaGTTTGTTGTCTTATGTAAAACAAGGACCCAAGCATGGAGGGGT | + |
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Preference number: 1 (lower is better) Translates to: MFGPCSRLDCKQQTL*FVVLCKTRTQAWRG Trigger: ACCCCTCCATGCTTGGGTCCTTGTTTTACATAAGACAACAAAGCACAATGTCTGCTGTTTACAATCAAGACGACTACATGGTCCAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
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| 3UTR TCA 90 bp | AAACTCTGCCAAGTGTCAGATAGAAGAACAATTCTCTTTGCATCTTaGGCATGTCACCAAGAAAGCAAGACAGGCTACAATACCTGTTAC | + |
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Preference number: 1 (lower is better) Translates to: KLCQVSDRRTILFAS*ACHQESKTGYNTCY Trigger: GTAACAGGTATTGTAGCCTGTCTTGCTTTCTTGGTGACATGCTCAAGATGCAAAGAGAATTGTTCTTCTATCTGACACTTGGCAGAGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR TCA 90 bp | CTAATTAAGAAAATGCCCTACTGGTTTGCCTACAGGCAGATCTTATaGAGCATTTTCTCAGCTGAAGCTCTCACTTCTCTGATAACTCTA | + |
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Preference number: 1 (lower is better) Translates to: LIKKMPYWFAYRQIL*SIFSAEALTSLITL Trigger: TAGAGTTATCAGAGAAGTGAGAGCTTCAGCTGAGAAAATGCTTCATAAGATCTGCCTGTAGGCAAACCAGTAGGGCATTTTCTTAATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR GCA 90 bp | GAGAGTAAAGGGTCACAAGTCAGAAAAGAAGTTAAGCTATTTCTTTaGAGAGCACACAGCTTCTTTATCAAAATAATGTATGAATGGCTA | + |
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Preference number: 1 (lower is better) Translates to: ESKGSQVRKEVKLFL*RAHSFFIKIMYEWL Trigger: TAGCCATTCATACATTATTTTGATAAAGAAGCTGTGTGCTCTGCAAAGAAATAGCTTAACTTCTTTTCTGACTTGTGACCCTTTACTCTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
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| 3UTR CCA 90 bp | ACAAATAGTATTAGAAGGAGAGTATGGTTTAATAGAAAAGGATGGTaGGCTAGAGAATTAATGTTCATAGAGAGGTTGTCAGTTTTGGAC | + |
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Preference number: 1 (lower is better) Translates to: TNSIRRRVWFNRKGW*ARELMFIERLSVLD Trigger: GTCCAAAACTGACAACCTCTCTATGAACATTAATTCTCTAGCCCACCATCCTTTTCTATTAAACCATACTCTCCTTCTAATACTATTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
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| 3UTR CAA 90 bp | TGTGCCTGGGAACACAGCAGCATGACTGGGAGCAGAGCAGCGTTCTaGGGAGCACAGCAACGTGACTGGGAGCAGAGAAGCATATCTGGG | + |
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Preference number: 2 (lower is better) Translates to: CAWEHSSMTGSRAAF*GAQQRDWEQRSISG Trigger: CCCAGATATGCTTCTCTGCTCCCAGTCACGTTGCTGTGCTCCCAAGAACGCTGCTCTGCTCCCAGTCATGCTGCTGTGTTCCCAGGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR-3UTR CCA 90 bp | AGCCCCGGCTCTACAGGACCTCAGCACACAGAAGTAGAGCTGCTGGAAGGGGTGGTGCTCAATGATGGGTaGCAGCATCTGCATCCACAA | + |
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Preference number: 2 (lower is better) Translates to: SPGSTGPQHTEVELLEGVVLNDG*QHLHPQ Trigger: TTGTGGATGCAGATGCTGCCACCCATCATTGAGCAC...CACCCCTTCCAGCAGCTCTACTTCTGTGTGCTGAGGTCCTGTAGAGCCGGGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
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| 3UTR-3UTR TCA 90 bp | AACTTATACAGAGCAGGAACCTGGAGGCAGGAACTGATGCAGAGGTCATGGAGGTACCAGCCTGTGTCTTaGGGGGAGGCAGCACCAACT | + |
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Preference number: 2 (lower is better) Translates to: NLYRAGTWRQELMQRSWRYQPVS*GEAAPT Trigger: AGTTGGTGCTGCCTCCCCTCAAGACACAGGCTGGTA...CCTCCATGACCTCTGCATCAGTTCCTGCCTCCAGGTTCCTGCTCTGTATAAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR-3UTR TCA 90 bp | TTCTCAAGAATGAGGAATGGAGGTGGTCACGAGGCTGTGGAGGATGAGGAACAGTTCTTGCTTCTTTCCTaGGCCTCTTGGGCCCTCCTG | + |
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Preference number: 2 (lower is better) Translates to: FSRMRNGGGHEAVEDEEQFLLLS*ASWALL Trigger: CAGGAGGGCCCAAGAGGCTCAGGAAAGAAGCAAGAA...CTGTTCCTCATCCTCCACAGCCTCGTGACCACCTCCATTCCTCATTCTTGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
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| 3UTR-3UTR CCA 90 bp | GTCATCGCCAGGCCTTTATTCCCTGTGTGTGCTGATGGTTGCTGTTGCCCTGAAAATGAGGAATGGAGGTaGTCACGAGGCTGTGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: VIARPLFPVCADGCCCPENEEWR*SRGCGG Trigger: TCCTCCACAGCCTCGTGACCACCTCCATTCCTCATT...TTCAGGGCAACAGCAACCATCAGCACACACAGGGAATAAAGGCCTGGCGATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGTGCTGCTTACTGGTGTGTTCCTTATGGCTTGCTCAGCCTGCTTTCTTACCAGTCATCTACCTGTaGTGTGCCTGGGAGCACAGC | + |
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Preference number: 2 (lower is better) Translates to: EECCLLVCSLWLAQPAFLPVIYL*CAWEHS Trigger: GCTGTGCTCCCAGGCACACCACAGGTAGATGACTGG...TAAGAAAGCAGGCTGAGCAAGCCATAAGGAACACACCAGTAAGCAGCACTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR-3UTR TCA 90 bp | ACTACCCGGCCTAATGTGCCCCTCAGCTCTATAGTGCCCATAAAACCCATCACCCCTCCACAAAAGACTTaGAAGAGAGCTGGGCTTGCT | + |
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Preference number: 2 (lower is better) Translates to: TTRPNVPLSSIVPIKPITPPQKT*KRAGLA Trigger: AGCAAGCCCAGCTCTCTTTCAAGTCTTTTGTGGAGG...GGTGATGGGTTTTATGGGCACTATAGAGCTGAGGGGCACATTAGGCCGGGTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
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| 3UTR-3UTR TCA 90 bp | AGGACCTCAGCACACAGAAGTAGAGCTGCTGGAAGGGGTGAGCCTTACTCACCAACTGAGGCCTGGTTCTaGCCCTCATTTTTAAGTGGA | + |
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Preference number: 2 (lower is better) Translates to: RTSAHRSRAAGRGEPYSPTEAWF*PSFLSG Trigger: TCCACTTAAAAATGAGGGTCAGAACCAGGCCTCAGT...TGGTGAGTAAGGCTCACCCCTTCCAGCAGCTCTACTTCTGTGTGCTGAGGTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
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| 3UTR-3UTR GCA 90 bp | ACTACCCGGCCTAATGTGCCCCTCAGCTCTATAGTGCCCATAAAACCCATCACCCTAACACACAGGCTATaGCTTCCTTTCCCCTTAGCC | + |
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Preference number: 2 (lower is better) Translates to: TTRPNVPLSSIVPIKPITLTHRL*LPFPLA Trigger: GGCTAAGGGGAAAGGAAGGCATAGCCTGTGTGTTAG...GGTGATGGGTTTTATGGGCACTATAGAGCTGAGGGGCACATTAGGCCGGGTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGTGCTGCTTACTGGTGTGTTCCTTATGGCTTGCTCAGCCTGCTTTCTTACATCTACCTGTGGTGTaGCTGGGAGCACAGCAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: EECCLLVCSLWLAQPAFLHLPVV*LGAQQC Trigger: ACACTGCTGTGCTCCCAGGCACACCACAGGTAGATG...TAAGAAAGCAGGCTGAGCAAGCCATAAGGAACACACCAGTAAGCAGCACTCCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CAA 90 bp | CAGAGGTCATGGAGGAGTGCTGCTTACTGGTGTGTTCCTTATGGCTaGCTCAGCCTGCTTTCTTACAGAATTCAGGACACAAGCTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: QRSWRSAAYWCVPYG*LSLLSYRIQDTSSG Trigger: CCCTGAGCTTGTGTCCTGAATTCTGTAAGAAAGCAGGCTGAGCAAGCCATAAGGAACACACCAGTAAGCAGCACTCCTCCATGACCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR TCA 90 bp | AGACATCTTAGCTATACTTCCTTGCTCTTAGTACACAAGGTCTCAACCTGGGTTGGTGTTGGAGCCCTCTaGGTAGAGACACCCCACCCC | + |
|
Preference number: 2 (lower is better) Translates to: RHLSYTSLLLVHKVSTWVGVGAL*VETPHP Trigger: GGGGTGGGGTGTCTCTACTCAGAGGGCTCCAACACC...AACCCAGGTTGAGACCTTGTGTACTAAGAGCAAGGAAGTATAGCTAAGATGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR CCA 90 bp | CAGACCAAAGTGTGGCTCTCAGTTTATCACCTGCTCACCACATTGGCTCTAGTTGCACAGCAGTGTGCCTaGGAACACAGCAGCATGACT | + |
|
Preference number: 2 (lower is better) Translates to: QTKVWLSVYHLLTTLALVAQQCA*EHSSMT Trigger: AGTCATGCTGCTGTGTTCCCAGGCACACTGCTGTGC...AACTAGAGCCAATGTGGTGAGCAGGTGATAAACTGAGAGCCACACTTTGGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CAA 90 bp | AGTGTGGCTCTCAGTTTATCACCTGCTCACCACATTGGCTCTAGTTaGGATGACTACAGGAGCATCAGTCCTGTCACTGGGCCAGTTCTA | + |
|
Preference number: 2 (lower is better) Translates to: SVALSLSPAHHIGSS*DDYRSISPVTGPVL Trigger: TAGAACTGGCCCAGTGACAGGACTGATGCTCCTGTAGTCATCCAAACTAGAGCCAATGTGGTGAGCAGGTGATAAACTGAGAGCCACACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CAA 90 bp | GCACAGACCAAAGTGTGGCTCTCAGTTTATCACCTGCTCACCACATaGGCTCTAGTTTGGATGACTACAGGAGCATCAGTCCTGTCACTG | + |
|
Preference number: 2 (lower is better) Translates to: AQTKVWLSVYHLLTT*ALVWMTTGASVLSL Trigger: CAGTGACAGGACTGATGCTCCTGTAGTCATCCAAACTAGAGCCAATGTGGTGAGCAGGTGATAAACTGAGAGCCACACTTTGGTCTGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR TCA 90 bp | GGCAGCATCTGCATCCACAAACTGTCTTTAAAGGTATCCATTCCTTCCCCGCAGTTCACTCTCCCCATCTaGTCTCAAAGGACACCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: GSICIHKLSLKVSIPSPQFTLPI*SQRTPS Trigger: TGAGGGTGTCCTTTGAGATCAGATGGGGAGAGTGAA...CTGCGGGGAAGGAATGGATACCTTTAAAGACAGTTTGTGGATGCAGATGCTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR TCA 90 bp | TTATACAGAGCAGGAACCTGGAGGCAGGAACTGATGCAGAGGTCATGGAGGAGTGATGCCAAACTGCAGTaGAAATTGAAGGTGTGGCTC | + |
|
Preference number: 2 (lower is better) Translates to: LYRAGTWRQELMQRSWRSDAKLQ*KLKVWL Trigger: GAGCCACACCTTCAATTTTCACTGCAGTTTGGCATC...ACTCCTCCATGACCTCTGCATCAGTTCCTGCCTCCAGGTTCCTGCTCTGTATAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR GCA 90 bp | CTTGATCAGCCGTTCCCTGATGCAATCCCAGGGGCAGCTCTGACTGTGCTTCTTGGTCTTTCCTATTCCTaGAGAGGAAAGCCTATTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LDQPFPDAIPGAALTVLLGLSYS*RGKPIF Trigger: GAAAATAGGCTTTCCTCTGCAGGAATAGGAAAGACC...AAGAAGCACAGTCAGAGCTGCCCCTGGGATTGCATCAGGGAACGGCTGATCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR GCA 90 bp | TGCATCTTGAGCATGTCACCAAGAAAGCAAGACAGGCTACAATACCTGTTACATGGGAGCACAGCAGTGTaGCTGGGAGCACAGCAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: CILSMSPRKQDRLQYLLHGSTAV*LGAQQH Trigger: ATGCTGCTGTGCTCCCAGGCACACTGCTGTGCTCCC...ATGTAACAGGTATTGTAGCCTGTCTTGCTTTCTTGGTGACATGCTCAAGATGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CCA 90 bp | CTTGATCAGCCGTTCCCTGATGCAATCCCAGGGGCAGCTCTGACTGTGCTTCTTAAGGAACGGAGGAAATaGAAGTTAAAGCCACAAGTG | + |
|
Preference number: 2 (lower is better) Translates to: LDQPFPDAIPGAALTVLLKERRK*KLKPQV Trigger: CACTTGTGGCTTTAACTTCCATTTCCTCCGTTCCTT...AAGAAGCACAGTCAGAGCTGCCCCTGGGATTGCATCAGGGAACGGCTGATCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR CCA 90 bp | GTCATCGCCAGGCCTTTATTCCCTGTGTGTGCTGATGGTTGCTGTTGCCCTGAAACAAATGAGAATCCCTaGGCAAAGAAAGAGCGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: VIARPLFPVCADGCCCPETNENP*AKKERL Trigger: CAAGCGCTCTTTCTTTGCCCAGGGATTCTCATTTGT...TTCAGGGCAACAGCAACCATCAGCACACACAGGGAATAAAGGCCTGGCGATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTTATGCTTCCATATCACAGTTCATCACCAAAGGCAATCAGGACAGGAACTGCAGAGCAGTGTGCCTaGGAGCACAGCAGCATGACT | + |
|
Preference number: 2 (lower is better) Translates to: QLMLPYHSSSPKAIRTGTAEQCA*EHSSMT Trigger: AGTCATGCTGCTGTGCTCCCAGGCACACTGCTCTGC...AGTTCCTGTCCTGATTGCCTTTGGTGATGAACTGTGATATGGAAGCATAAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR TCA 90 bp | TGTTGCCAAGAAAGAGCATGCACAAGTCTGCCTCATGTCTGTGCCCAAGCCCCGAGAAAAGCCAGACGATaGTTCATAAAACGCAATGTC | + |
|
Preference number: 2 (lower is better) Translates to: CCQERACTSLPHVCAQAPRKARR*FIKRNV Trigger: GACATTGCGTTTTATGAATCATCGTCTGGCTTTTCT...CGGGGCTTGGGCACAGACATGAGGCAGACTTGTGCATGCTCTTTCTTGGCAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR GCA 90 bp | AGGACCTCAGCACACAGAAGTAGAGCTGCTGGAAGGGGTGAGCCTTACTCACCAAGAGACACTTTTGGATaGCTGATCCAACAAGTAACA | + |
|
Preference number: 2 (lower is better) Translates to: RTSAHRSRAAGRGEPYSPRDTFG*LIQQVT Trigger: TGTTACTTGTTGGATCAGGCATCCAAAAGTGTCTCT...TGGTGAGTAAGGCTCACCCCTTCCAGCAGCTCTACTTCTGTGTGCTGAGGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR GCA 90 bp | CAGCTTATGCTTCCATATCACAGTTCATCACCAAAGGCAATCAGGACAGGAACTAGTGCCTGTCTACTCTaGCTTCTGGCACCGTGCAAC | + |
|
Preference number: 2 (lower is better) Translates to: QLMLPYHSSSPKAIRTGTSACLL*LLAPCN Trigger: GTTGCACGGTGCCAGAAGGCAGAGTAGACAGGCACT...AGTTCCTGTCCTGATTGCCTTTGGTGATGAACTGTGATATGGAAGCATAAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CCA 90 bp | TTATACAGAGCAGGAACCTGGAGGCAGGAACTGATGCAGAGGTCATGGAGGAGTTTCTGTCCTCAAAGCTaGATTCAGAGTGCTGAGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LYRAGTWRQELMQRSWRSFCPQS*IQSAEL Trigger: CAACTCAGCACTCTGAATCCAGCTTTGAGGACAGAA...ACTCCTCCATGACCTCTGCATCAGTTCCTGCCTCCAGGTTCCTGCTCTGTATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR TCA 90 bp | GAGGAGTGCTGCTTACTGGTGTGTTCCTTATGGCTTGCTCAGCCTGCTTTCTTAAAGTTTTGCCCACCTTaGTATTCTTTCCCTGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: EECCLLVCSLWLAQPAFLKFCPP*YSFPVC Trigger: GCAGACAGGGAAAGAATATCAAGGTGGGCAAAACTT...TAAGAAAGCAGGCTGAGCAAGCCATAAGGAACACACCAGTAAGCAGCACTCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR TCA 90 bp | TTATACAGAGCAGGAACCTGGAGGCAGGAACTGATGCAGAGGTCATGGAGGAGTATTCTCTTTGCATCTTaGGCATGTCACCAAGAAAGC | + |
|
Preference number: 2 (lower is better) Translates to: LYRAGTWRQELMQRSWRSILFAS*ACHQES Trigger: GCTTTCTTGGTGACATGCTCAAGATGCAAAGAGAAT...ACTCCTCCATGACCTCTGCATCAGTTCCTGCCTCCAGGTTCCTGCTCTGTATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR GCA 90 bp | CTTGATCAGCCGTTCCCTGATGCAATCCCAGGGGCAGCTCTGACTGTGCTTCTTCCTCACTTCAATACATaGACTAAAAGAAAAGCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LDQPFPDAIPGAALTVLLPHFNT*TKRKAR Trigger: TCTGGCTTTTCTTTTAGTGCATGTATTGAAGTGAGG...AAGAAGCACAGTCAGAGCTGCCCCTGGGATTGCATCAGGGAACGGCTGATCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR GCA 90 bp | AACTTATACAGAGCAGGAACCTGGAGGCAGGAACTGATGCAGAGGTCATGGAGGGGTCATTTGTGTGAATaGTTTGGGCTATGTCACTTG | + |
|
Preference number: 2 (lower is better) Translates to: NLYRAGTWRQELMQRSWRGHLCE*FGLCHL Trigger: CAAGTGACATAGCCCAAAGCATTCACACAAATGACC...CCTCCATGACCTCTGCATCAGTTCCTGCCTCCAGGTTCCTGCTCTGTATAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR TCA 90 bp | TTATACAGAGCAGGAACCTGGAGGCAGGAACTGATGCAGAGGTCATGGAGGAGTTTAAATCTGCAGGGATaGAACTTAGATGTAGATGGC | + |
|
Preference number: 2 (lower is better) Translates to: LYRAGTWRQELMQRSWRSLNLQG*NLDVDG Trigger: GCCATCTACATCTAAGTTTCATCCCTGCAGATTTAA...ACTCCTCCATGACCTCTGCATCAGTTCCTGCCTCCAGGTTCCTGCTCTGTATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR GCA 90 bp | AAGGTGAGCTGCACAGACCAAAGTGTGGCTCTCAGTTTATCACCTGCTCACCACCACAATATATTGCATTaGGACCAGCAGGAACAAACA | + |
|
Preference number: 2 (lower is better) Translates to: KVSCTDQSVALSLSPAHHHNILH*DQQEQT Trigger: TGTTTGTTCCTGCTGGTCGCAATGCAATATATTGTG...GTGGTGAGCAGGTGATAAACTGAGAGCCACACTTTGGTCTGTGCAGCTCACCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR GCA 90 bp | AACTTATACAGAGCAGGAACCTGGAGGCAGGAACTGATGCAGAGGTCATGGAGGTATTCTTTCCCTGTCTaGTACCTCAAGAGAAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: NLYRAGTWRQELMQRSWRYSFPV*YLKRKP Trigger: TGGTTTTCTCTTGAGGTAGCAGACAGGGAAAGAATA...CCTCCATGACCTCTGCATCAGTTCCTGCCTCCAGGTTCCTGCTCTGTATAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CCA 90 bp | TGTTGCCAAGAAAGAGCATGCACAAGTCTGCCTCATGTCTGTGCCCAAGCCCCGACCCTCATTTTTAAGTaGAAGCAAATATGTACTTGG | + |
|
Preference number: 2 (lower is better) Translates to: CCQERACTSLPHVCAQAPTLIFK*KQICTW Trigger: CCAAGTACATATTTGCTTCCACTTAAAAATGAGGGT...CGGGGCTTGGGCACAGACATGAGGCAGACTTGTGCATGCTCTTTCTTGGCAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR TCA 90 bp | GTTCTGTATAATAGAAATGTTGCAAAAGGAAAGAACGGTCCAGTCATCTACCTGAACCTCCCCCAAGCCTaGCAAGTGAGAAGCTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: VLYNRNVAKGKNGPVIYLNLPQA*QVRSFQ Trigger: CTGGAAGCTTCTCACTTGTCAGGCTTGGGGGAGGTT...CAGGTAGATGACTGGACCGTTCTTTCCTTTTGCAACATTTCTATTATACAGAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR-3UTR GCA 90 bp | AGAAGGAATTCCAATGTGGGCTCAATGGCAAACAAAATTTACCTTACACAGACAACCCTCAGGGACTGTTaGCACACTCTCTCAGAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: RRNSNVGSMANKIYLTQTTLRDC*HTLSES Trigger: GCTCTCTGAGAGAGTGTGGCAACAGTCCCTGAGGGT...TGTCTGTGTAAGGTAAATTTTGTTTGCCATTGAGCCCACATTGGAATTCCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR GCA 90 bp | TTATACAGAGCAGGAACCTGGAGGCAGGAACTGATGCAGAGGTCATGGAGGAGTAAGAACAATTCTCTTTaGATCTTGAGCATGTCACCA | + |
|
Preference number: 2 (lower is better) Translates to: LYRAGTWRQELMQRSWRSKNNSL*ILSMSP Trigger: TGGTGACATGCTCAAGATGCAAAGAGAATTGTTCTT...ACTCCTCCATGACCTCTGCATCAGTTCCTGCCTCCAGGTTCCTGCTCTGTATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
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| 3UTR-3UTR CCA 90 bp | TTCTCAAGAATGAGGAATGGAGGTGGTCACGAGGCTGTGGAGGATGAGGAACAGTTTTTGAGAAAGCAGTaGTTGAGACTAATGATCTGG | + |
|
Preference number: 2 (lower is better) Translates to: FSRMRNGGGHEAVEDEEQFLRKQ*LRLMIW Trigger: CCAGATCATTAGTCTCAACCACTGCTTTCTCAAAAA...CTGTTCCTCATCCTCCACAGCCTCGTGACCACCTCCATTCCTCATTCTTGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCATCGCCAGGCCTTTATTCCCTGTGTGTGCTGATGGTTGCTGTTGCCCTGAAAATAGAAAAGGATGGTaGGCTAGAGAATTAATGTTC | + |
|
Preference number: 2 (lower is better) Translates to: VIARPLFPVCADGCCCPENRKGW*ARELMF Trigger: GAACATTAATTCTCTAGCCCACCATCCTTTTCTATT...TTCAGGGCAACAGCAACCATCAGCACACACAGGGAATAAAGGCCTGGCGATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCCTACATGGTCATTTGTGGAAATTGCTAGACTTGGCCTTCAACTTGGAATTATTATTGAGTCAGTGCTaGTCCCATTCGCCCTTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: GLHGHLWKLLDLAFNLELLLSQC*SHSPFL Trigger: GAGAAAGGGCGAATGGGAGCAGCACTGACTCAATAA...TAATTCCAAGTTGAAGGCCAAGTCTAGCAATTTCCACAAATGACCATGTAGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAATTCCAATGTGGGCTCAATGGCAAACAAAATTTACCTTACACAGACATTGGGAGAATGGGCTGGGATaGTGGATAGTGTCTCTTCGA | + |
|
Preference number: 2 (lower is better) Translates to: GIPMWAQWQTKFTLHRHWENGLG*WIVSLR Trigger: TCGAAGAGACACTATCCACCATCCCAGCCCATTCTC...CCAATGTCTGTGTAAGGTAAATTTTGTTTGCCATTGAGCCCACATTGGAATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR CCA 90 bp | GTTCTGTATAATAGAAATGTTGCAAAAGGAAAGAACGGTCCAGTCATCTACCTGATCCAGCAGTGTGCCTaGGAGCACAGTGGTGTGAAT | + |
|
Preference number: 2 (lower is better) Translates to: VLYNRNVAKGKNGPVIYLIQQCA*EHSGVN Trigger: ATTCACACCACTGTGCTCCCAGGCACACTGCTGGAT...CAGGTAGATGACTGGACCGTTCTTTCCTTTTGCAACATTTCTATTATACAGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CCA 90 bp | CAGCTTATGCTTCCATATCACAGTTCATCACCAAAGGCAATCAGGACAGGAACTAAGAAAATGCCCTACTaGTTTGCCTACAGGCAGATC | + |
|
Preference number: 2 (lower is better) Translates to: QLMLPYHSSSPKAIRTGTKKMPY*FAYRQI Trigger: GATCTGCCTGTAGGCAAACCAGTAGGGCATTTTCTT...AGTTCCTGTCCTGATTGCCTTTGGTGATGAACTGTGATATGGAAGCATAAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CAA 90 bp | AACGTTTGTAAAAGAGAGGGATGTTTGGAAAAACCCTGTGATCTCTaGGCAAGCACAGCATTGGAAGTAAAGGCACTGAGAGTAAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: NVCKREGCLEKPCDL*ASTALEVKALRVRT Trigger: TGTCCTTACTCTCAGTGCCTTTACTTCCAATGCTGTGCTTGCCAAGAGATCACAGGGTTTTTCCAAACATCCCTCTCTTTTACAAACGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR GCA 90 bp | CAAACTGTCTTTAAAGGTATCCATTCCTTCCCCGCAGTTTCCTATGAAACTGTCCAGCAATGCTGGTCTTaGTTTGCTGAGTTTCTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: QTVFKGIHSFPAVSYETVQQCWS*FAEFLW Trigger: CCAAAGAAACTCAGCAAAGCAAGACCAGCATTGCTG...GACAGTTTCATAGGAAACTGCGGGGAAGGAATGGATACCTTTAAAGACAGTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGACCAAAGTTCCAGAGACAGGGTTTATTGCTTTCAAAAACAAGACATGTGAACCCTGTGATCTCTTaGCAAGCACAGCATTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VRPKFQRQGLLLSKTRHVNPVIS*QAQHWK Trigger: CTTCCAATGCTGTGCTTGCCAAGAGATCACAGGGTT...CACATGTCTTGTTTTTGAAAGCAATAAACCCTGTCTCTGGAACTTTGGTCTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CCA 90 bp | AATCTGCAAATGCCCAAGTTTCTTGTATCAAATGGCACAGTTTATAACCACAAAGCACAGCAGTGTGGCTaGAAATCCAGCAGTGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: NLQMPKFLVSNGTVYNHKAQQCG*KSSSVP Trigger: AGGCACACTGCTGGATTTCCAGCCACACTGCTGTGC...TTTGTGGTTATAAACTGTGCCATTTGATACAAGAAACTTGGGCATTTGCAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CCA 90 bp | AATCTGCAAATGCCCAAGTTTCTTGTATCAAATGGCACAGTTTATAACCACAAATACCTGTGGTGTGCCTaGGAGCACAGCAGTGTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: NLQMPKFLVSNGTVYNHKYLWCA*EHSSVP Trigger: AGGAACACTGCTGTGCTCCCAGGCACACCACAGGTA...TTTGTGGTTATAAACTGTGCCATTTGATACAAGAAACTTGGGCATTTGCAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CAA 90 bp | GGCCTACATGGTCATTTGTGGAAATTGCTAGACTTGGCCTTCAACTaGGAATTATATGAGGAGATACAGATATTCTCTGGGCCAATGACT | + |
|
Preference number: 2 (lower is better) Translates to: GLHGHLWKLLDLAFN*ELYEEIQIFSGPMT Trigger: AGTCATTGGCCCAGAGAATATCTGTATCTCCTCATATAATTCCAAGTTGAAGGCCAAGTCTAGCAATTTCCACAAATGACCATGTAGGCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR CAA 90 bp | GGAAGGGAAAACTCTGCCAAGTGTCAGATAGAAGAACAATTCTCTTaGCATCTTGAGCATGTCACCAAGAAAGCAAGACAGGCTACAATA | + |
|
Preference number: 2 (lower is better) Translates to: GRENSAKCQIEEQFS*HLEHVTKKARQATI Trigger: TATTGTAGCCTGTCTTGCTTTCTTGGTGACATGCTCAAGATGCAAAGAGAATTGTTCTTCTATCTGACACTTGGCAGAGTTTTCCCTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR TCA 90 bp | TTTAAGTGGAAGCAAATATGTACTTGGGTCTTTCCTATTCCTGCAGAGGAAAGCATCAGCAAGTATCGGTaGGGATGGGAAGGTAAACAA | + |
|
Preference number: 2 (lower is better) Translates to: FKWKQICTWVFPIPAEESISKYR*GWEGKQ Trigger: TTGTTTACCTTCCCATCCTCACCGATACTTGCTGAT...GCTTTCCTCTGCAGGAATAGGAAAGACCCAAGTACATATTTGCTTCCACTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR TCA 90 bp | GAACGGAGGAAATGGAAGTTAAAGCCACAAGTGATAGAAGAGAGAAGAAATGTTGAGCTGGGCTTGCTTTaGGAATATCCAAGTTTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: ERRKWKLKPQVIEERRNVELGLL*EYPSFP Trigger: GGGAAAACTTGGATATTCTCAAAGCAAGCCCAGCTC...AACATTTCTTCTCTCTTCTATCACTTGTGGCTTTAACTTCCATTTCCTCCGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR TCA 90 bp | TTTAAGTGGAAGCAAATATGTACTTGGGTCTTTCCTATTCCTGCAGAGGAAAGCAACTACTGCATCATGTaGGTCTTATCTCAGCCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: FKWKQICTWVFPIPAEESNYCIM*VLSQPD Trigger: GTCAGGCTGAGATAAGACTCACATGATGCAGTAGTT...GCTTTCCTCTGCAGGAATAGGAAAGACCCAAGTACATATTTGCTTCCACTTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR TCA 90 bp | GGCCTACATGGTCATTTGTGGAAATTGCTAGACTTGGCCTTCAACTTGGAATTATTCAGGCTCTCTGGTTaGAAGAAGGAAAAAGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GLHGHLWKLLDLAFNLELFRLSG*KKEKER Trigger: CCTTTCTTTTTCCTTCTTTCAACCAGAGAGCCTGAA...TAATTCCAAGTTGAAGGCCAAGTCTAGCAATTTCCACAAATGACCATGTAGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR GCA 90 bp | TCACTTTTCTGTTCTTACATGAAAGAAGTTACTAAGGACTGCTGTGTGCTGTACGAAACACAAGAGCTGTaGCTAGCTACCCATGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: SLFCSYMKEVTKDCCVLYETQEL*LATHEE Trigger: CTCTTCATGGGTAGCTAGGCACAGCTCTTGTGTTTC...GTACAGCACACAGCAGTCCTTAGTAACTTCTTTCATGTAAGAACAGAAAAGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR GCA 90 bp | CATAAAGGCCTACATGGTCATTTGTGGAAATTGCTAGACTTGGCCTTCAACTTGCAGTTTTGGACAAGATaGCATGGAATTGCTAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: HKGLHGHLWKLLDLAFNLQFWTR*HGIART Trigger: TGTCCTAGCAATTCCATGGCATCTTGTCCAAAACTG...CAAGTTGAAGGCCAAGTCTAGCAATTTCCACAAATGACCATGTAGGCCTTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGTTCTGACCCTCATTTTTAAGTGGAAGCAAATATGTACTTGGGTCTTTCCTATCCAAGTTTTCCCTTaGACCACCCTATCAGCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LVLTLIFKWKQICTWVFPIQVFP*TTLSAS Trigger: ACTTGCTGATAGGGTGGTCCAAGGGAAAACTTGGAT...AGGAAAGACCCAAGTACATATTTGCTTCCACTTAAAAATGAGGGTCAGAACCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR CCA 90 bp | ATCTCAAAGGACACCCTCACTTCAATACATGCACTAAAAGAAAAGCCAGACGATACAGAGGAGACAGTGTaGATTCAAATGTCCTCCACA | + |
|
Preference number: 2 (lower is better) Translates to: ISKDTLTSIHALKEKPDDTEETV*IQMSST Trigger: TGTGGAGGACATTTGAATCCACACTGTCTCCTCTGT...ATCGTCTGGCTTTTCTTTTAGTGCATGTATTGAAGTGAGGGTGTCCTTTGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR CCA 90 bp | ATCTCAAAGGACACCCTCACTTCAATACATGCACTAAAAGAAAAGCCAGACGATCTTCTATTAGGAGAATaGGCTGGGATGGTGGATAGT | + |
|
Preference number: 2 (lower is better) Translates to: ISKDTLTSIHALKEKPDDLLLGE*AGMVDS Trigger: ACTATCCACCATCCCAGCCCATTCTCCTAATAGAAG...ATCGTCTGGCTTTTCTTTTAGTGCATGTATTGAAGTGAGGGTGTCCTTTGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGACCAAAGTTCCAGAGACAGGGTTTATTGCTTTCAAAAACAAGACATGTGCAATACTGCAGTTTCTaGCTTCAGAGGAATTCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: VRPKFQRQGLLLSKTRHVQYCSF*LQRNSG Trigger: GCCTGAATTCCTCTGAAGCCAGAAACTGCAGTATTG...CACATGTCTTGTTTTTGAAAGCAATAAACCCTGTCTCTGGAACTTTGGTCTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR TCA 90 bp | GGTGTGGCTCCCAGTAAACTCATATGGAAAATATACATTCACATCTTTCTTGGTGAAGTACTAAACCTCTaGGGCCAATACTGCAGTTTC | + |
|
Preference number: 2 (lower is better) Translates to: GVAPSKLIWKIYIHIFLGEVLNL*GQYCSF Trigger: GAAACTGCAGTATTGGCCTCAGAGGTTTAGTACTTC...ACCAAGAAAGATGTGAATGTATATTTTCCATATGAGTTTACTGGGAGCCACACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR GCA 90 bp | CCACTCCCCACCATACTACATATAAATAATCTAGACATCTTAGCTATACTTCCTGCTCTAACTCAGCAATaGTGGTCTTGCTTTGCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: PLPTILHINNLDILAILPALTQQ*WSCFAE Trigger: CTCAGCAAAGCAAGACCAGCATTGCTGAGTTAGAGC...AGGAAGTATAGCTAAGATGTCTAGATTATTTATATGTAGTATGGTGGGGAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR GCA 90 bp | GGTGTGGCTCCCAGTAAACTCATATGGAAAATATACATTCACATCTTTCTTGGTGCACAGTGGTGTGAATaGAATCAACATATTGGCCCT | + |
|
Preference number: 2 (lower is better) Translates to: GVAPSKLIWKIYIHIFLGAQWCE*NQHIGP Trigger: AGGGCCAATATGTTGATTGCATTCACACCACTGTGC...ACCAAGAAAGATGTGAATGTATATTTTCCATATGAGTTTACTGGGAGCCACACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CCA 90 bp | TATCAAATGGCTCTGATTTTCTCATTTACAATGTCAGCCCCCTTCCTTGCAGCCAAGCAAATATGTACTTaGGTCTTTCCTATTCCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: YQMALIFSFTMSAPFLAAKQICT*VFPIPA Trigger: TGCAGGAATAGGAAAGACCCAAGTACATATTTGCTT...GGCTGCAAGGAAGGGGGCTGACATTGTAAATGAGAAAATCAGAGCCATTTGATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR CCA 90 bp | CCACTCCCCACCATACTACATATAAATAATCTAGACATCTTAGCTATACTTCCTCTAAGAAAAGGGTGTTaGAGCCCTCTGAGTAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: PLPTILHINNLDILAILPLRKGC*SPLSRD Trigger: GTCTCTACTCAGAGGGCTCCAACACCCTTTTCTTAG...AGGAAGTATAGCTAAGATGTCTAGATTATTTATATGTAGTATGGTGGGGAGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR CCA 90 bp | GGAATTCCAATGTGGGCTCAATGGCAAACAAAATTTACCTTACACAGACATTGGCTCAAGAGACACTTTTaGATGCCTGATCCAACAAGT | + |
|
Preference number: 2 (lower is better) Translates to: GIPMWAQWQTKFTLHRHWLKRHF*MPDPTS Trigger: ACTTGTTGGATCAGGCATCCAAAAGTGTCTCTTGAG...CCAATGTCTGTGTAAGGTAAATTTTGTTTGCCATTGAGCCCACATTGGAATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR CAA 90 bp | CTCACCTGGGAAATGGCATCTCTAACTACACTTCTTTCTCTACTTTaGATTATGTCATCTGTGCAACTAAGTAGGTTTTCACGGCTCTAT | + |
|
Preference number: 2 (lower is better) Translates to: LTWEMASLTTLLSLL*IMSSVQLSRFSRLY Trigger: ATAGAGCCGTGAAAACCTACTTAGTTGCACAGATGACATAATCAAAAGTAGAGAAAGAAGTGTAGTTAGAGATGCCATTTCCCAGGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR TCA 90 bp | ATCTCAAAGGACACCCTCACTTCAATACATGCACTAAAAGAAAAGCCAGACGATCCTATTTTCAAAATGTaGGTGGAGACCAAAGAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: ISKDTLTSIHALKEKPDDPIFKM*VETKEH Trigger: ATGCTCTTTGGTCTCCACTCACATTTTGAAAATAGG...ATCGTCTGGCTTTTCTTTTAGTGCATGTATTGAAGTGAGGGTGTCCTTTGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGACCAAAGTTCCAGAGACAGGGTTTATTGCTTTCAAAAACAAGACATGTGAAAGAGAGGGATGTTTaGAAAAACCCTGTGATCTCT | + |
|
Preference number: 2 (lower is better) Translates to: VRPKFQRQGLLLSKTRHVKERDV*KNPVIS Trigger: AGAGATCACAGGGTTTTTCCAAACATCCCTCTCTTT...CACATGTCTTGTTTTTGAAAGCAATAAACCCTGTCTCTGGAACTTTGGTCTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR TCA 90 bp | AGACACTTTTGGATGCCTGATCCAACAAGTAACAGTTTATCAAATGGCTCTGATAAATACACATCAACGTaGCTAACTACGCAAGGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RHFWMPDPTSNSLSNGSDKYTST*LTTQGK Trigger: TTTCCCTTGCGTAGTTAGTCACGTTGATGTGTATTT...ATCAGAGCCATTTGATAAACTGTTACTTGTTGGATCAGGCATCCAAAAGTGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR TCA 90 bp | TTAAGGTTTTCTAAAAACAGTGGTCAAAGCCTTGAAGACGTGGCTTTAGTAAATGAGAAGGAAGACAAATaGGAATCCCTGGGCAAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LRFSKNSGQSLEDVALVNEKEDK*ESLGKE Trigger: TTCTTTGCCCAGGGATTCTCATTTGTCTTCCTTCTC...ATTTACTAAAGCCACGTCTTCAAGGCTTTGACCACTGTTTTTAGAAAACCTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR GCA 90 bp | GATGCCATGGAATTGCTAGGACAAGGAACAAAGATTAGAGCATTAAAAGATGAATGTATGGAGCCTAGTTaGTCTTACAGTTCTTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: DAMELLGQGTKIRALKDECMEPS*SYSSCF Trigger: GAAGCAAGAACTGTAAGAGCAACTAGGCTCCATACA...TTCATCTTTTAATGCTCTAATCTTTGTTCCTTGTCCTAGCAATTCCATGGCATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR GCA 90 bp | CTAGACTTGGCCTTCAACTTGGAATTATATGAGGAGATACAGATATTCTCTGGGAAGGAAATGTGCTTCTaGTTGGTGTTTAGTTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: LDLAFNLELYEEIQIFSGKEMCF*LVFSFC Trigger: ACAGAAACTAAACACCAAGCAGAAGCACATTTCCTT...CCCAGAGAATATCTGTATCTCCTCATATAATTCCAAGTTGAAGGCCAAGTCTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGAGACCAAAGTTCCAGAGACAGGGTTTATTGCTTTCAAAAACAAGACATGTGCCTATGAAATCACCATaGCCCATATTACAATGTATC | + |
|
Preference number: 2 (lower is better) Translates to: VRPKFQRQGLLLSKTRHVPMKSP*PILQCI Trigger: GATACATTGTAATATGGGCCATGGTGATTTCATAGG...CACATGTCTTGTTTTTGAAAGCAATAAACCCTGTCTCTGGAACTTTGGTCTCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CAA 90 bp | CTACTTTACTTTCAATCTCTCTTTCTGGGGCATATACTTCTCCCATaGCTCGGAACTAATCACTCTATAACAAATGAAACATTCGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LLYFQSLFLGHILLP*LGTNHSITNETFAS Trigger: AGAAGCGAATGTTTCATTTGTTATAGAGTGATTAGTTCCGAGCAATGGGAGAAGTATATGCCCCAGAAAGAGAGATTGAAAGTAAAGTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCTGTATAATAGAAATGTTGCAAAAGGAAAGAACGGTCCAGTCATCTACCTGAATGATCAAGTAGCCTaGTTTATCTCTTCTAGCACA | + |
|
Preference number: 2 (lower is better) Translates to: VLYNRNVAKGKNGPVIYLNDQVA*FISSST Trigger: TGTGCTAGAAGAGATAAATCAGGCTACTTGATCATT...CAGGTAGATGACTGGACCGTTCTTTCCTTTTGCAACATTTCTATTATACAGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR GCA 90 bp | TCACTTTTCTGTTCTTACATGAAAGAAGTTACTAAGGACTGCTGTGTGCTGTACCATTGTGTGAATTCTTaGTTCCTTCTCTTTCAGTGT | + |
|
Preference number: 2 (lower is better) Translates to: SLFCSYMKEVTKDCCVLYHCVNS*FLLFQC Trigger: ACACTGAAAGAGAAGGAAGCAAGAATTCACACAATG...GTACAGCACACAGCAGTCCTTAGTAACTTCTTTCATGTAAGAACAGAAAAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGTGTAAAAACTGTAAGGAAATGTGCTTCTGCTTGGTGTTTAGTTTCTGTTTTTGCTCTTACAGTTCTTaGTTCTTTCCTGAGCCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: LCKNCKEMCFCLVFSFCFCSYSS*FFPEPL Trigger: AAGAGGCTCAGGAAAGAAGCAAGAACTGTAAGAGCA...AAAACAGAAACTAAACACCAAGCAGAAGCACATTTCCTTACAGTTTTTACACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR CCA 90 bp | AGAAGGAATTCCAATGTGGGCTCAATGGCAAACAAAATTTACCTTACACAGACATTTTCAAAATGTGAGTaGAGACCAAAGAGCATCAAC | + |
|
Preference number: 2 (lower is better) Translates to: RRNSNVGSMANKIYLTQTFSKCE*RPKSIN Trigger: GTTGATGCTCTTTGGTCTCCACTCACATTTTGAAAA...TGTCTGTGTAAGGTAAATTTTGTTTGCCATTGAGCCCACATTGGAATTCCTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR CAA 90 bp | AACTGTAAGGAAATGTGCTTCTGCTTGGTGTTTAGTTTCTGTTTTTaGAGAAAGCAGTGGTTGAGACTAATGATCTGGGATTCATACAAT | + |
|
Preference number: 2 (lower is better) Translates to: NCKEMCFCLVFSFCF*RKQWLRLMIWDSYN Trigger: ATTGTATGAATCCCAGATCATTAGTCTCAACCACTGCTTTCTCAAAAAACAGAAACTAAACACCAAGCAGAAGCACATTTCCTTACAGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR GCA 90 bp | GATGCCATGGAATTGCTAGGACAAGGAACAAAGATTAGAGCATTAAAAGATGAAAACTGTAAGGAAATGTaGTTCTGCTTGGTGTTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: DAMELLGQGTKIRALKDENCKEM*FCLVFS Trigger: ACTAAACACCAAGCAGAAGCACATTTCCTTACAGTT...TTCATCTTTTAATGCTCTAATCTTTGTTCCTTGTCCTAGCAATTCCATGGCATC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR CAA 90 bp | AATGTTCATAGAGAGGTTGTCAGTTTTGGACAAGATGCCATGGAATaGCTAGGACAAGGAACAAAGATTAGAGCATTAAAAGATGAAATA | + |
|
Preference number: 2 (lower is better) Translates to: NVHREVVSFGQDAME*LGQGTKIRALKDEI Trigger: TATTTCATCTTTTAATGCTCTAATCTTTGTTCCTTGTCCTAGCAATTCCATGGCATCTTGTCCAAAACTGACAACCTCTCTATGAACATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR CCA 72 bp | AGCACAGCAGTGTGCCTGGGAACACAGCAGCATGACTaGGAGCAGAGCAGCGTTCTTGGGAGCACAGCAACG | + |
|
Preference number: 3 (lower is better) Translates to: STAVCLGTQQHD*EQSSVLGSTAT Trigger: CGTTGCTGTGCTCCCAAGAACGCTGCTCTGCTCCCAGTCATGCTGCTGTGTTCCCAGGCACACTGCTGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR GCA 72 bp | GAGCCAAGTGTTGCCAAGAAAGAGCATGCACAAGTCTaGCTCATGTCTGTGCCCAAGCCCCGGCTCTACAGG | + |
|
Preference number: 3 (lower is better) Translates to: EPSVAKKEHAQV*LMSVPKPRLYR Trigger: CCTGTAGAGCCGGGGCTTGGGCACAGACATGAGGCAGACTTGTGCATGCTCTTTCTTGGCAACACTTGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR CCA 72 bp | AGCAGAGCAGCGTTCTTGGGAGCACAGCAACGTGACTaGGAGCAGAGAAGCATATCTGGGAGCACAGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SRAAFLGAQQRD*EQRSISGSTAV Trigger: CACTGCTGTGCTCCCAGATATGCTTCTCTGCTCCCAGTCACGTTGCTGTGCTCCCAAGAACGCTGCTCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCAAGCCCCGGCTCTACAGGACCTCAGCACACAGAAGTAGAGCTGCTGGAATCCTCCACAAAAGACTaGAAAGAGAGCTGGGCTTGC | + |
|
Preference number: 3 (lower is better) Translates to: CPSPGSTGPQHTEVELLESSTKD*KESWAC Trigger: GCAAGCCCAGCTCTCTTTCAAGTCTTTTGTGGAGGA...TTCCAGCAGCTCTACTTCTGTGTGCTGAGGTCCTGTAGAGCCGGGGCTTGGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR CCA 72 bp | GCAGGAACCTGGAGGCAGGAACTGATGCAGAGGTCATaGAGGAGTGCTGCTTACTGGTGTGTTCCTTATGGC | + |
|
Preference number: 3 (lower is better) Translates to: AGTWRQELMQRS*RSAAYWCVPYG Trigger: GCCATAAGGAACACACCAGTAAGCAGCACTCCTCCATGACCTCTGCATCAGTTCCTGCCTCCAGGTTCCTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CAA 90 bp | AACTTATACAGAGCAGGAACCTGGAGGCAGGAACTGATGCAGAGGTCATGGAGGATACCAGCCTGTGTCTaGAGGGGAGGCAGCACCAAC | + |
|
Preference number: 3 (lower is better) Translates to: NLYRAGTWRQELMQRSWRIPACV*RGGSTN Trigger: GTTGGTGCTGCCTCCCCTCAAGACACAGGCTGGTAT...CCTCCATGACCTCTGCATCAGTTCCTGCCTCCAGGTTCCTGCTCTGTATAAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR GCA 72 bp | GAGGCAGGAACTGATGCAGAGGTCATGGAGGAGTGCTaGTTACTGGTGTGTTCCTTATGGCTTGCTCAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: EAGTDAEVMEEC*LLVCSLWLAQP Trigger: AGGCTGAGCAAGCCATAAGGAACACACCAGTAAGCAGCACTCCTCCATGACCTCTGCATCAGTTCCTGCCTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR GCA 72 bp | CTGGAGGCAGGAACTGATGCAGAGGTCATGGAGGAGTaGTGCTTACTGGTGTGTTCCTTATGGCTTGCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: LEAGTDAEVMEE*CLLVCSLWLAQ Trigger: CTGAGCAAGCCATAAGGAACACACCAGTAAGCAGCACTCCTCCATGACCTCTGCATCAGTTCCTGCCTCCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CCA 72 bp | GTTGCAAAAGGAAAGAACGGTCCAGTCATCTACCTGTaGTGTGCCTGGGAGCACAGCAGTGTTCCTAGTAGC | + |
|
Preference number: 3 (lower is better) Translates to: VAKGKNGPVIYL*CAWEHSSVPSS Trigger: GCTACTAGGAACACTGCTGTGCTCCCAGGCACACCACAGGTAGATGACTGGACCGTTCTTTCCTTTTGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CAA 90 bp | TTATACAGAGCAGGAACCTGGAGGCAGGAACTGATGCAGAGGTCATGGAGGAGTCACCTGCTCACCACATaGGCTCTAGTTTGGATGACT | + |
|
Preference number: 3 (lower is better) Translates to: LYRAGTWRQELMQRSWRSHLLTT*ALVWMT Trigger: AGTCATCCAAACTAGAGCCAATGTGGTGAGCAGGTG...ACTCCTCCATGACCTCTGCATCAGTTCCTGCCTCCAGGTTCCTGCTCTGTATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR TCA 72 bp | GGTTTTCACGGCTCTATCCACAAACGTCCCCTCTTCTaGGGCCAGCACATCTCTGTTGGGATCACATACAAC | + |
|
Preference number: 3 (lower is better) Translates to: GFHGSIHKRPLF*GQHISVGITYN Trigger: GTTGTATGTGATCCCAACAGAGATGTGCTGGCCTCAGAAGAGGGGACGTTTGTGGATAGAGCCGTGAAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR TCA 72 bp | CTCTGGCAATACTCGGATACCACAGGGCACTCAAGGTaGGCTGCACAGACCAAAGTGTGGCTCTCAGTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: LWQYSDTTGHSR*AAQTKVWLSVY Trigger: ATAAACTGAGAGCCACACTTTGGTCTGTGCAGCTCACCTTGAGTGCCCTGTGGTATCCGAGTATTGCCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR GCA 72 bp | CTAGCATGTATGGAGCCTAGTTGCTCTTACAGTTCTTaGTTCTTTCCTGAGCCTCTTGGGCCCTCCTGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: LACMEPSCSYSS*FFPEPLGPSCY Trigger: GTAGCAGGAGGGCCCAAGAGGCTCAGGAAAGAAGCAAGAACTGTAAGAGCAACTAGGCTCCATACATGCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR GCA 72 bp | ATCGCCAGGCCTTTATTCCCTGTGTGTGCTGATGGTTaGTGTTGCCCTGAAGCTGATCTGCTGTCTCTTCTA | + |
|
Preference number: 3 (lower is better) Translates to: IARPLFPVCADG*CCPEADLLSLL Trigger: TAGAAGAGACAGCAGATCAGCTTCAGGGCAACAGCAACCATCAGCACACACAGGGAATAAAGGCCTGGCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR GCA 72 bp | GCAATACTCGGATACCACAGGGCACTCAAGGTGAGCTaGACAGACCAAAGTGTGGCTCTCAGTTTATCACCT | + |
|
Preference number: 3 (lower is better) Translates to: AILGYHRALKVS*TDQSVALSLSP Trigger: AGGTGATAAACTGAGAGCCACACTTTGGTCTGTGCAGCTCACCTTGAGTGCCCTGTGGTATCCGAGTATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CCA 72 bp | GAACTGATGCAGAGGTCATGGAGGAGTGCTGCTTACTaGTGTGTTCCTTATGGCTTGCTCAGCCTGCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ELMQRSWRSAAY*CVPYGLLSLLS Trigger: AGAAAGCAGGCTGAGCAAGCCATAAGGAACACACCAGTAAGCAGCACTCCTCCATGACCTCTGCATCAGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CAA 90 bp | GTCATCGCCAGGCCTTTATTCCCTGTGTGTGCTGATGGTTGCTGTTGCCCTGAAGACTCCGAATTATTATaGAGTCAGTGCTGCTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: VIARPLFPVCADGCCCPEDSELL*SQCCSH Trigger: ATGGGAGCAGCACTGACTCAATAATAATTCGGAGTC...TTCAGGGCAACAGCAACCATCAGCACACACAGGGAATAAAGGCCTGGCGATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCATCGCCAGGCCTTTATTCCCTGTGTGTGCTGATGGTTGCTGTTGCCCTGAAGGCCTACATGGTCATTaGTGGAAATTGCTAGACTTG | + |
|
Preference number: 3 (lower is better) Translates to: VIARPLFPVCADGCCCPEGLHGH*WKLLDL Trigger: CAAGTCTAGCAATTTCCACAAATGACCATGTAGGCC...TTCAGGGCAACAGCAACCATCAGCACACACAGGGAATAAAGGCCTGGCGATGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR TCA 72 bp | AGTTTTCCCTTGGACCACCCTATCAGCAAGTATCGGTaGGGATGGGAAGGTAAACAAAAGGGCCTGTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: SFPLDHPISKYR*GWEGKQKGLSI Trigger: GATGGACAGGCCCTTTTGTTTACCTTCCCATCCTCACCGATACTTGCTGATAGGGTGGTCCAAGGGAAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR TCA 72 bp | CCTAGCTCTAACTCAGCAATGCTGGTCTTGCTTTGCTaGGTTTCTTTGGCTGTCCTCTTCCTCTCCAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: PSSNSAMLVLLC*VSLAVLFLSKG Trigger: ACCCTTGGAGAGGAAGAGGACAGCCAAAGAAACTCAGCAAAGCAAGACCAGCATTGCTGAGTTAGAGCTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR CCA 72 bp | AGCTGGGCTTGCTTTGAGAATATCCAAGTTTTCCCTTaGACCACCCTATCAGCAAGTATCGGTGAGGATGGG | + |
|
Preference number: 3 (lower is better) Translates to: SWACFENIQVFP*TTLSASIGEDG Trigger: CCCATCCTCACCGATACTTGCTGATAGGGTGGTCCAAGGGAAAACTTGGATATTCTCAAAGCAAGCCCAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR CCA 72 bp | CAGGAAGCCAGAGACACAAGGGTGCTCAATGATGGGTaGCAGCATCTGCATCCACAAACTGTCTTTAAAGGT | + |
|
Preference number: 3 (lower is better) Translates to: QEARDTRVLNDG*QHLHPQTVFKG Trigger: ACCTTTAAAGACAGTTTGTGGATGCAGATGCTGCCACCCATCATTGAGCACCCTTGTGTCTCTGGCTTCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR CCA 72 bp | GTGGCTGGAAATCCAGCAGTGTGCCTGGGAGCACAGTaGTGTGAATGCAATCAACATATTGGCCCTCAAATT | + |
|
Preference number: 3 (lower is better) Translates to: VAGNPAVCLGAQ*CECNQHIGPQI Trigger: AATTTGAGGGCCAATATGTTGATTGCATTCACACCACTGTGCTCCCAGGCACACTGCTGGATTTCCAGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CCA 72 bp | TCAGTTTATCACCTGCTCACCACATTGGCTCTAGTTTaGATGACTACAGGAGCATCAGTCCTGTCACTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SVYHLLTTLALV*MTTGASVLSLG Trigger: GCCCAGTGACAGGACTGATGCTCCTGTAGTCATCCAAACTAGAGCCAATGTGGTGAGCAGGTGATAAACTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGCATCTGCATCCACAAACTGTCTTTAAAGGTATCCATTCCTTCCCCGCAGTATCCAAGTTTTCCCTaGGACCACCCTATCAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: GSICIHKLSLKVSIPSPQYPSFP*DHPISK Trigger: CTTGCTGATAGGGTGGTCCAAGGGAAAACTTGGATA...CTGCGGGGAAGGAATGGATACCTTTAAAGACAGTTTGTGGATGCAGATGCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR CAA 90 bp | GTCATCGCCAGGCCTTTATTCCCTGTGTGTGCTGATGGTTGCTGTTGCCCTGAATTGAGAAAGCAGTGGTaGAGACTAATGATCTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: VIARPLFPVCADGCCCPELRKQW*RLMIWD Trigger: ATCCCAGATCATTAGTCTCAACCACTGCTTTCTCAA...TTCAGGGCAACAGCAACCATCAGCACACACAGGGAATAAAGGCCTGGCGATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCAAGAATGAGGAATGGAGGTGGTCACGAGGCTGTGGAGGATGAGGAACAGGGTCATTTGTGGAAATaGCTAGACTTGGCCTTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: FSRMRNGGGHEAVEDEEQGHLWK*LDLAFN Trigger: GTTGAAGGCCAAGTCTAGCAATTTCCACAAATGACC...CTGTTCCTCATCCTCCACAGCCTCGTGACCACCTCCATTCCTCATTCTTGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR TCA 72 bp | GCACTTTGTTCTCCTAGCTACTTGAAGGATTGGAGATaGCCATGCCTAGAGAGATATCGGAGAGAGCCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ALCSPSYLKDWR*PCLERYRREPA Trigger: AGCTGGCTCTCTCCGATATCTCTCTAGGCATGGTCATCTCCAATCCTTCAAGTAGCTAGGAGAACAAAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR TCA 72 bp | GACATGTGTCCTGCACGCCCTTTCTCTATCCAAGAGTaGTGGATCCAGATGAAAGCCACTCACGAATGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: DMCPARPFSIQE*WIQMKATHEWF Trigger: AAACCATTCGTGAGTGGCTTTCATCTGGATCCATCACTCTTGGATAGAGAAAGGGCGTGCAGGACACATGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR GCA 72 bp | ACCACCACTGACTCCGAATTATTATTGAGTCAGTGCTaGTCCCATTCGCCCTTTCTCATGACCCTCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: TTTDSELLLSQC*SHSPFLMTLFM Trigger: CATGAAGAGGGTCATGAGAAAGGGCGAATGGGAGCAGCACTGACTCAATAATAATTCGGAGTCAGTGGTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR GCA 72 bp | AGGCCTTTATTCCCTGTGTGTGCTGATGGTTGCTGTTaGCCTGAAGCTGATCTGCTGTCTCTTCTACTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: RPLFPVCADGCC*PEADLLSLLLY Trigger: GTAAAGTAGAAGAGACAGCAGATCAGCTTCAGGGCAACAGCAACCATCAGCACACACAGGGAATAAAGGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR GCA 72 bp | AACATAGAATCTTTAGTTCAGAACCAGGATGAGCAGTaGCTGTCTACTCTGCCTTCTGGCACCGTGCAACTC | + |
|
Preference number: 3 (lower is better) Translates to: NIESLVQNQDEQ*LSTLPSGTVQL Trigger: GAGTTGCACGGTGCCAGAAGGCAGAGTAGACAGGCACTGCTCATCCTGGTTCTGAACTAAAGATTCTATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR GCA 72 bp | CTGCTTACTGGTGTGTTCCTTATGGCTTGCTCAGCCTaGTTTCTTACAGAATTCAGGACACAAGCTCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LLTGVFLMACSA*FLTEFRTQAQG Trigger: TCCCTGAGCTTGTGTCCTGAATTCTGTAAGAAAGCAGGCTGAGCAAGCCATAAGGAACACACCAGTAAGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR GCA 72 bp | GGAGGAGTGCTGCTTACTGGTGTGTTCCTTATGGCTTaGTCAGCCTGCTTTCTTACAGAATTCAGGACACAA | + |
|
Preference number: 3 (lower is better) Translates to: GGVLLTGVFLMA*SACFLTEFRTQ Trigger: TTGTGTCCTGAATTCTGTAAGAAAGCAGGCTGAGCAAGCCATAAGGAACACACCAGTAAGCAGCACTCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CCA 72 bp | GTCATGGAGGAGTGCTGCTTACTGGTGTGTTCCTTATaGCTTGCTCAGCCTGCTTTCTTACAGAATTCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VMEECCLLVCSL*LAQPAFLQNSG Trigger: TCCTGAATTCTGTAAGAAAGCAGGCTGAGCAAGCCATAAGGAACACACCAGTAAGCAGCACTCCTCCATGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGCATCTGCATCCACAAACTGTCTTTAAAGGTATCCATTCCTTCCCCGCAGGAAGCAAATATGTACTaGGGTCTTTCCTATTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: GSICIHKLSLKVSIPSPQEANMY*GLSYSC Trigger: GCAGGAATAGGAAAGACCCAAGTACATATTTGCTTC...CTGCGGGGAAGGAATGGATACCTTTAAAGACAGTTTGTGGATGCAGATGCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR CAA 90 bp | TTCTCAAGAATGAGGAATGGAGGTGGTCACGAGGCTGTGGAGGATGAGGAACAGTGTCTTCTCTTGGAGTaGTATCTGATTTTGTACCAG | + |
|
Preference number: 3 (lower is better) Translates to: FSRMRNGGGHEAVEDEEQCLLLE*YLILYQ Trigger: CTGGTACAAAATCAGATACAACTCCAAGAGAAGACA...CTGTTCCTCATCCTCCACAGCCTCGTGACCACCTCCATTCCTCATTCTTGAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCATCGCCAGGCCTTTATTCCCTGTGTGTGCTGATGGTTGCTGTTGCCCTGAAAGTATAGTCAGGTTCTaGACAGAAATATCCCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VIARPLFPVCADGCCCPESIVRF*TEISPK Trigger: TTTTGGGGATATTTCTGTCAAGAACCTGACTATACT...TTCAGGGCAACAGCAACCATCAGCACACACAGGGAATAAAGGCCTGGCGATGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGACCAAAGTGTGGCTCTCAGTTTATCACCTGCTCACCACATTGGCTCTAGTTCAAGTTTTGCCCACCTaGATATTCTTTCCCTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QTKVWLSVYHLLTTLALVQVLPT*IFFPCL Trigger: CAGACAGGGAAAGAATATCAAGGTGGGCAAAACTTG...AACTAGAGCCAATGTGGTGAGCAGGTGATAAACTGAGAGCCACACTTTGGTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CAA 90 bp | TTATACAGAGCAGGAACCTGGAGGCAGGAACTGATGCAGAGGTCATGGAGGAGTAATTCTCTTTGCATCTaGAGCATGTCACCAAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LYRAGTWRQELMQRSWRSNSLCI*SMSPRK Trigger: CTTTCTTGGTGACATGCTCAAGATGCAAAGAGAATT...ACTCCTCCATGACCTCTGCATCAGTTCCTGCCTCCAGGTTCCTGCTCTGTATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR TCA 72 bp | ACCCAGAAGTGCAATTTCCATAGGCATTGTCAGTGTTaGCGTCAGAAGGAATTCCAATGTGGGCTCAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: TQKCNFHRHCQC*RQKEFQCGLNG Trigger: GCCATTGAGCCCACATTGGAATTCCTTCTGACGTCAACACTGACAATGCCTATGGAAATTGCACTTCTGGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR TCA 72 bp | AGACAAATGAGAATCCCTGGGCAAAGAAAGAGCGCTTaGATTGACAGCTTGCAACCACCACTGACTCCGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RQMRIPGQRKSA*IDSLQPPLTPN Trigger: ATTCGGAGTCAGTGGTGGTTGCAAGCTGTCAATTCAAGCGCTCTTTCTTTGCCCAGGGATTCTCATTTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR GCA 72 bp | TTGGGATCACATACAACCCTAGCTCTAACTCAGCAATaGTGGTCTTGCTTTGCTGAGTTTCTTTGGCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: LGSHTTLALTQQ*WSCFAEFLWLS Trigger: GGACAGCCAAAGAAACTCAGCAAAGCAAGACCAGCATTGCTGAGTTAGAGCTAGGGTTGTATGTGATCCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR GCA 72 bp | CATGAAATGTGCATGGGGGTGCTTAGGAACTCAGTATaGATACGGAGTGTGAAAGAGTTGAGCTCTTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: HEMCMGVLRNSV*IRSVKELSSSA Trigger: AGCTGAAGAGCTCAACTCTTTCACACTCCGTATGCATACTGAGTTCCTAAGCACCCCCATGCACATTTCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR GCA 72 bp | TTTGGGCTATGTCACTTGGGTGTAAGTCATGAAATGTaGATGGGGGTGCTTAGGAACTCAGTATGCATACGG | + |
|
Preference number: 3 (lower is better) Translates to: FGLCHLGVSHEM*MGVLRNSVCIR Trigger: CCGTATGCATACTGAGTTCCTAAGCACCCCCATGCACATTTCATGACTTACACCCAAGTGACATAGCCCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGGGATGTTTGGAAAAACCCTGTGATCTCTTGGCAAGCACAGCATTGGAAGCTGGCGCTTGGTCTTTaGCTCCATAAACATATGTTA | + |
|
Preference number: 3 (lower is better) Translates to: ERDVWKNPVISWQAQHWKLALGL*LHKHML Trigger: TAACATATGTTTATGGAGCAAAAGACCAAGCGCCAG...CTTCCAATGCTGTGCTTGCCAAGAGATCACAGGGTTTTTCCAAACATCCCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CAA 90 bp | AACTTATACAGAGCAGGAACCTGGAGGCAGGAACTGATGCAGAGGTCATGGAGGTTAAAGAAAGATCTTTaGGAAGGGAAAACTCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: NLYRAGTWRQELMQRSWRLKKDL*EGKTLP Trigger: TGGCAGAGTTTTCCCTTCCAAAAGATCTTTCTTTAA...CCTCCATGACCTCTGCATCAGTTCCTGCCTCCAGGTTCCTGCTCTGTATAAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR TCA 72 bp | GTACCAGGAAACACAAGAGCTGTGCCTAGCTACCCATaGAGAGCAGGCTGTGTAAAAACTGTAAGGAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: VPGNTRAVPSYP*RAGCVKTVRKC Trigger: ACATTTCCTTACAGTTTTTACACAGCCTGCTCTTCATGGGTAGCTAGGCACAGCTCTTGTGTTTCCTGGTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR TCA 72 bp | CACTCTATAACAAATGAAACATTCGCTTCTCAAGAATaGGGAATGGAGGTGGTCACGAGGCTGTGGAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: HSITNETFASQE*GMEVVTRLWRM Trigger: CATCCTCCACAGCCTCGTGACCACCTCCATTCCTCATTCTTGAGAAGCGAATGTTTCATTTGTTATAGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR GCA 72 bp | GTGCTACCAGATACACTAGCATGTATGGAGCCTAGTTaGTCTTACAGTTCTTGCTTCTTTCCTGAGCCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: VLPDTLACMEPS*SYSSCFFPEPL Trigger: AAGAGGCTCAGGAAAGAAGCAAGAACTGTAAGAGCAACTAGGCTCCATACATGCTAGTGTATCTGGTAGCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR TCA 72 bp | TCCTTTCTCTCCAGTCAGTCTCCTGGTAGGACAACCTaGAAAGCCCTGCTTATAGAATTCAACCACTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: SFLSSQSPGRTT*KALLIEFNHFS Trigger: AGAAAAGTGGTTGAATTCTATAAGCAGGGCTTTTCAGGTTGTCCTACCAGGAGACTGACTGGAGAGAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR TCA 72 bp | AATGAGAATCCCTGGGCAAAGAAAGAGCGCTTGAATTaGCAGCTTGCAACCACCACTGACTCCGAATTATTA | + |
|
Preference number: 3 (lower is better) Translates to: NENPWAKKERLN*QLATTTDSELL Trigger: TAATAATTCGGAGTCAGTGGTGGTTGCAAGCTGTCAATTCAAGCGCTCTTTCTTTGCCCAGGGATTCTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR TCA 72 bp | CCCTCGATGCTATTTGATGATGAAGTACTAAACCTCTaGGGCCAATACTGCAGTTTCTGGCTTCAGAGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: PSMLFDDEVLNL*GQYCSFWLQRN Trigger: ATTCCTCTGAAGCCAGAAACTGCAGTATTGGCCTCAGAGGTTTAGTACTTCATCATCAAATAGCATCGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR TCA 72 bp | AAAATGCCCTACTGGTTTGCCTACAGGCAGATCTTATaGAGCATTTTCTCAGCTGAAGCTCTCACTTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: KMPYWFAYRQIL*SIFSAEALTSL Trigger: CAGAGAAGTGAGAGCTTCAGCTGAGAAAATGCTTCATAAGATCTGCCTGTAGGCAAACCAGTAGGGCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR GCA 72 bp | AATCCAGCAGTGTGCCTGGGAGCACAGTGGTGTGAATaGAATCAACATATTGGCCCTCAAATTTATGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: NPAVCLGAQWCE*NQHIGPQIYET Trigger: TGTTTCATAAATTTGAGGGCCAATATGTTGATTGCATTCACACCACTGTGCTCCCAGGCACACTGCTGGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CCA 72 bp | CTGATGGGTCTGAAGGTAACACCTATGAAATCACCATaGCCCATATTACAATGTATCCTACAGACCTCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LMGLKVTPMKSP*PILQCILQTSV Trigger: GACAGAGGTCTGTAGGATACATTGTAATATGGGCCATGGTGATTTCATAGGTGTTACCTTCAGACCCATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CCA 72 bp | ACACTAGCCAGTACAGCAACTATACATAGGCATCTTTaGCATCTAGAACCTGTTATAGGTAGCCCAATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: TLASTATIHRHL*HLEPVIGSPIC Trigger: GCAGATTGGGCTACCTATAACAGGTTCTAGATGCCAAAGATGCCTATGTATAGTTGCTGTACTGGCTAGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CAA 90 bp | CATAAAGGCCTACATGGTCATTTGTGGAAATTGCTAGACTTGGCCTTCAACTTGACCTCAGTCTCTCCATaGTGTGAATTCTTGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HKGLHGHLWKLLDLAFNLTSVSP*CEFLLP Trigger: AGGAAGCAAGAATTCACACAATGGAGAGACTGAGGT...CAAGTTGAAGGCCAAGTCTAGCAATTTCCACAAATGACCATGTAGGCCTTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR CAA 90 bp | CATAAAGGCCTACATGGTCATTTGTGGAAATTGCTAGACTTGGCCTTCAACTTGGAGAGGTTGTCAGTTTaGGACAAGATGCCATGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HKGLHGHLWKLLDLAFNLERLSV*DKMPWN Trigger: ATTCCATGGCATCTTGTCCAAAACTGACAACCTCTC...CAAGTTGAAGGCCAAGTCTAGCAATTTCCACAAATGACCATGTAGGCCTTTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGCTTATGCTTCCATATCACAGTTCATCACCAAAGGCAATCAGGACAGGAACTAAAAGAGAGGGATGTTaGGAAAAACCCTGTGATCTC | + |
|
Preference number: 3 (lower is better) Translates to: QLMLPYHSSSPKAIRTGTKREGC*EKPCDL Trigger: GAGATCACAGGGTTTTTCCAAACATCCCTCTCTTTT...AGTTCCTGTCCTGATTGCCTTTGGTGATGAACTGTGATATGGAAGCATAAGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR TCA 72 bp | AGACAGTGTGGATTCAAATGTCCTCCACAAAAGACTTaGAAGAGAGCTGGGCTTGCTTTGAGAATATCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: RQCGFKCPPQKT*KRAGLALRISK Trigger: CTTGGATATTCTCAAAGCAAGCCCAGCTCTCTTTCAAGTCTTTTGTGGAGGACATTTGAATCCACACTGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR GCA 72 bp | CTTTTCTGTTCTTACATGAAAGAAGTTACTAAGGACTaGTGTGTGCTGTACCAGGAAACACAAGAGCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: LFCSYMKEVTKD*CVLYQETQELC Trigger: GCACAGCTCTTGTGTTTCCTGGTACAGCACACAGCAGTCCTTAGTAACTTCTTTCATGTAAGAACAGAAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR GCA 72 bp | AAAGCCACTTCAGGAGGAAAGGCTTTGTTCAGCTTATaGTTCCATATCACAGTTCATCACCAAAGGCAATCA | + |
|
Preference number: 3 (lower is better) Translates to: KATSGGKALFSL*FHITVHHQRQS Trigger: TGATTGCCTTTGGTGATGAACTGTGATATGGAAGCATAAGCTGAACAAAGCCTTTCCTCCTGAAGTGGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR TCA 72 bp | TTTATTGCTTTCAAAAACAAGACATGTGAGTGGCCATaGTGCATTCTCCTCTGGCAATACTCGGATACCACA | + |
|
Preference number: 3 (lower is better) Translates to: FIAFKNKTCEWP*CILLWQYSDTT Trigger: TGTGGTATCCGAGTATTGCCAGAGGAGAATGCATCATGGCCACTCACATGTCTTGTTTTTGAAAGCAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR TCA 72 bp | ATCAGGTTTCTGTCCTCAAAGCTGGATTCAGAGTGCTaGGTTGTAGTTTTTAGCTCCACTACATGTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: IRFLSSKLDSEC*VVVFSSTTCSF Trigger: AAAGGAACATGTAGTGGAGCTAAAAACTACAACTCAGCACTCTGAATCCAGCTTTGAGGACAGAAACCTGAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CAA 90 bp | GAACGGAGGAAATGGAAGTTAAAGCCACAAGTGATAGAAGAGAGAAGAAATGTTAGAGCTGGGCTTGCTTaGAGAATATCCAAGTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: ERRKWKLKPQVIEERRNVRAGLA*RISKFS Trigger: GGAAAACTTGGATATTCTCAAAGCAAGCCCAGCTCT...AACATTTCTTCTCTCTTCTATCACTTGTGGCTTTAACTTCCATTTCCTCCGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTGTGGCTCCCAGTAAACTCATATGGAAAATATACATTCACATCTTTCTTGAAACCCTGTGATCTCTaGGCAAGCACAGCATTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KVWLPVNSYGKYTFTSFLKPCDL*ASTALE Trigger: TTCCAATGCTGTGCTTGCCAAGAGATCACAGGGTTT...CAAGAAAGATGTGAATGTATATTTTCCATATGAGTTTACTGGGAGCCACACCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CAA 90 bp | AGAAGGAATTCCAATGTGGGCTCAATGGCAAACAAAATTTACCTTACACAGACAAGAGAGAAGAAATGTTaGGACCATGTAGTCGTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: RRNSNVGSMANKIYLTQTREKKC*DHVVVL Trigger: CAAGACGACTACATGGTCCAAACATTTCTTCTCTCT...TGTCTGTGTAAGGTAAATTTTGTTTGCCATTGAGCCCACATTGGAATTCCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR CAA 90 bp | TCACTTTTCTGTTCTTACATGAAAGAAGTTACTAAGGACTGCTGTGTGCTGTACCCATTGTGTGAATTCTaGCTTCCTTCTCTTTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLFCSYMKEVTKDCCVLYPLCEF*LPSLSV Trigger: CACTGAAAGAGAAGGAAGCAAGAATTCACACAATGG...GTACAGCACACAGCAGTCCTTAGTAACTTCTTTCATGTAAGAACAGAAAAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR TCA 72 bp | CAAGTGTCAGATAGAAGAACAATTCTCTTTGCATCTTaGGCATGTCACCAAGAAAGCAAGACAGGCTACAAT | + |
|
Preference number: 3 (lower is better) Translates to: QVSDRRTILFAS*ACHQESKTGYN Trigger: ATTGTAGCCTGTCTTGCTTTCTTGGTGACATGCTCAAGATGCAAAGAGAATTGTTCTTCTATCTGACACTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CCA 72 bp | CTGACCCTCATTTTTAAGTGGAAGCAAATATGTACTTaGGTCTTTCCTATTCCTGCAGAGGAAAGCCTATTT | + |
|
Preference number: 3 (lower is better) Translates to: LTLIFKWKQICT*VFPIPAEESLF Trigger: AAATAGGCTTTCCTCTGCAGGAATAGGAAAGACCCAAGTACATATTTGCTTCCACTTAAAAATGAGGGTCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR-3UTR CAA 90 bp | CTAGACTTGGCCTTCAACTTGGAATTATATGAGGAGATACAGATATTCTCTGGGTTTCATCTGAATCACTaGAGGAATAGGATGCTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LDLAFNLELYEEIQIFSGFHLNH*RNRMLL Trigger: CAAAAGCATCCTATTCCTCAAGTGATTCAGATGAAA...CCCAGAGAATATCTGTATCTCCTCATATAATTCCAAGTTGAAGGCCAAGTCTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTGTGGCTCCCAGTAAACTCATATGGAAAATATACATTCACATCTTTCTTGTACACTCACAATATATaGCATTGCGACCAGCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KVWLPVNSYGKYTFTSFLYTHNI*HCDQQE Trigger: TTCCTGCTGGTCGCAATGCAATATATTGTGAGTGTA...CAAGAAAGATGTGAATGTATATTTTCCATATGAGTTTACTGGGAGCCACACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTGTGGCTCCCAGTAAACTCATATGGAAAATATACATTCACATCTTTCTTGATGTTCTACAGGCCATaGGTAACTTCTATGAAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: KVWLPVNSYGKYTFTSFLMFYRP*VTSMKV Trigger: CACCTTCATAGAAGTTACCAATGGCCTGTAGAACAT...CAAGAAAGATGTGAATGTATATTTTCCATATGAGTTTACTGGGAGCCACACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR GCA 72 bp | AGAATACTCAATGTCCACTCAAGAGACACTTTTGGATaGCTGATCCAACAAGTAACAGTTTATCAAATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: RILNVHSRDTFG*LIQQVTVYQMA Trigger: AGCCATTTGATAAACTGTTACTTGTTGGATCAGGCATCCAAAAGTGTCTCTTGAGTGGACATTGAGTATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR GCA 72 bp | CATCTAGAACCTGTTATAGGTAGCCCAATCTGCAAATaGCCAAGTTTCTTGTATCAAATGGCACAGTTTATA | + |
|
Preference number: 3 (lower is better) Translates to: HLEPVIGSPICK*PSFLYQMAQFI Trigger: TATAAACTGTGCCATTTGATACAAGAAACTTGGGCATTTGCAGATTGGGCTACCTATAACAGGTTCTAGATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CCA 72 bp | AAAGTTTTTCTTTCAGTGAGTGTGACTGTCTTCTCTTaGTTCAATAGAAGTTTATTATTCCAAACCTCCCCC | + |
|
Preference number: 3 (lower is better) Translates to: KVFLSVSVTVFS*FNRSLLFQTSP Trigger: GGGGGAGGTTTGGAATAATAAACTTCTATTGAACCAAGAGAAGACAGTCACACTCACTGAAAGAAAAACTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CCA 72 bp | GAAAGAGTTGAGCTCTTCAGCTACAAAATTAAGTGTTaGAAAGTGAATGCTAAATCAACAGTGAGCAGTATC | + |
|
Preference number: 3 (lower is better) Translates to: ERVELFSYKIKC*KVNAKSTVSSI Trigger: GATACTGCTCACTGTTGATTTAGCATTCACTTTCCAACACTTAATTTTGTAGCTGAAGAGCTCAACTCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTGTGGCTCCCAGTAAACTCATATGGAAAATATACATTCACATCTTTCTTGTCTAAAGACCAAGTTTaGCCCACCTTGATATTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: KVWLPVNSYGKYTFTSFLSKDQV*PTLIFF Trigger: AAAGAATATCAAGGTGGGCAAAACTTGGTCTTTAGA...CAAGAAAGATGTGAATGTATATTTTCCATATGAGTTTACTGGGAGCCACACCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGTGTAAAAACTGTAAGGAAATGTGCTTCTGCTTGGTGTTTAGTTTCTGTTTTTTTCAGTGTCTTCTCTaGGAGTTGTATCTGATTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LCKNCKEMCFCLVFSFCFFQCLL*ELYLIL Trigger: CAAAATCAGATACAACTCCAAGAGAAGACACTGAAA...AAAACAGAAACTAAACACCAAGCAGAAGCACATTTCCTTACAGTTTTTACACAG 36% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR TCA 72 bp | TTATTTAACTATAGATGTCCAACTGAGGCCTGGTTCTaGCCCTCATTTTTAAGTGGAAGCAAATATGTACTT | + |
|
Preference number: 3 (lower is better) Translates to: LFNYRCPTEAWF*PSFLSGSKYVL Trigger: AAGTACATATTTGCTTCCACTTAAAAATGAGGGTCAGAACCAGGCCTCAGTTGGACATCTATAGTTAAATAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR CCA 72 bp | GTAAAGAATACTCAATGTCCACTCAAGAGACACTTTTaGATGCCTGATCCAACAAGTAACAGTTTATCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: VKNTQCPLKRHF*MPDPTSNSLSN Trigger: ATTTGATAAACTGTTACTTGTTGGATCAGGCATCCAAAAGTGTCTCTTGAGTGGACATTGAGTATTCTTTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR CCA 72 bp | GCTCAATGGCAAACAAAATTTACCTTACACAGACATTaGAGTATAAAATTGCTGAGCCTTAGCAATTGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: AQWQTKFTLHRH*SIKLLSLSNCS Trigger: TGAACAATTGCTAAGGCTCAGCAATTTTATACTCCAATGTCTGTGTAAGGTAAATTTTGTTTGCCATTGAGC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR CCA 72 bp | ATTAGAAGGAGAGTATGGTTTAATAGAAAAGGATGGTaGGCTAGAGAATTAATGTTCATAGAGAGGTTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: IRRRVWFNRKGW*ARELMFIERLS Trigger: TGACAACCTCTCTATGAACATTAATTCTCTAGCCCACCATCCTTTTCTATTAAACCATACTCTCCTTCTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR CCA 72 bp | AGTATTAGAAGGAGAGTATGGTTTAATAGAAAAGGATaGTGGGCTAGAGAATTAATGTTCATAGAGAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: SIRRRVWFNRKG*WARELMFIERL Trigger: CAACCTCTCTATGAACATTAATTCTCTAGCCCACCATCCTTTTCTATTAAACCATACTCTCCTTCTAATACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR CCA 72 bp | GAAGAAAGAATCTGTACAAAACAAGCAATGGATAGATaGGTTTATCTTATAGGAGGAAGGCTTGTGTATGAT | + |
|
Preference number: 3 (lower is better) Translates to: EERICTKQAMDR*VYLIGGRLVYD Trigger: ATCATACACAAGCCTTCCTCCTATAAGATAAACCCATCTATCCATTGCTTGTTTTGTACAGATTCTTTCTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR CAA 72 bp | GAACACAGCAGCATGACTGGGAGCAGAGCAGCGTTCTaGGGAGCACAGCAACGTGACTGGGAGCAGAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: EHSSMTGSRAAF*GAQQRDWEQRS Trigger: GCTTCTCTGCTCCCAGTCACGTTGCTGTGCTCCCAAGAACGCTGCTCTGCTCCCAGTCATGCTGCTGTGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| CDS-3UTR CCA 90 bp | TGCCCAAGCCCCGGCTCTACAGGACCTCAGCACACAGAAGTAGAGCTGCTGGAACATTTGCTGTGCTCCTaGAGCAGGATTTGGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPSPGSTGPQHTEVELLEHLLCS*SRIWWL Trigger: CAGCCACCAAATCCTGCTCCAGGAGCACAGCAAATG...TTCCAGCAGCTCTACTTCTGTGTGCTGAGGTCCTGTAGAGCCGGGGCTTGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| CDS-3UTR GCA 90 bp | ACAGCCCCACAGCTTCTATTAGGAGAATGGGCTGGGATGGTGGATAGTGTCTCTCGGTCCCATTTGCTGTaGTCCTGGAGCAGGATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TAPQLLLGEWAGMVDSVSRSHLL*SWSRIW Trigger: CCAAATCCTGCTCCAGGAGCACAGCAAATGGGACCG...AGAGACACTATCCACCATCCCAGCCCATTCTCCTAATAGAAGCTGTGGGGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| CDS-3UTR CCA 90 bp | CAGACCAAAGTGTGGCTCTCAGTTTATCACCTGCTCACCACATTGGCTCTAGTTACCACAGCCTCTGTATaGAAAGGGCCCTCACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTKVWLSVYHLLTTLALVTTASV*KGPSHS Trigger: GCTGTGTGAGGGCCCTTTCCATACAGAGGCTGTGGT...AACTAGAGCCAATGTGGTGAGCAGGTGATAAACTGAGAGCCACACTTTGGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CAA 72 bp | CTCAGTTTATCACCTGCTCACCACATTGGCTCTAGTTaGGATGACTACAGGAGCATCAGTCCTGTCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSPAHHIGSS*DDYRSISPVTG Trigger: CCCAGTGACAGGACTGATGCTCCTGTAGTCATCCAAACTAGAGCCAATGTGGTGAGCAGGTGATAAACTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| CDS-3UTR TCA 90 bp | CAAACTGTCTTTAAAGGTATCCATTCCTTCCCCGCAGTTTCCTATGAAACTGTCTGTGCCTCCGTGAGGTaGATTGGGCTGGACCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QTVFKGIHSFPAVSYETVCASVR*IGLDLE Trigger: TTCCAGGTCCAGCCCAATTCACCTCACGGAGGCACA...GACAGTTTCATAGGAAACTGCGGGGAAGGAATGGATACCTTTAAAGACAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR CAA 72 bp | TGGAGGAGTGCTGCTTACTGGTGTGTTCCTTATGGCTaGCTCAGCCTGCTTTCTTACAGAATTCAGGACACA | + |
|
Preference number: 4 (lower is better) Translates to: WRSAAYWCVPYG*LSLLSYRIQDT Trigger: TGTGTCCTGAATTCTGTAAGAAAGCAGGCTGAGCAAGCCATAAGGAACACACCAGTAAGCAGCACTCCTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| CDS-3UTR CCA 90 bp | CATAAAGGCCTACATGGTCATTTGTGGAAATTGCTAGACTTGGCCTTCAACTTGACCACAGCCTCTGTATaGAAAGGGCCCTCACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HKGLHGHLWKLLDLAFNLTTASV*KGPSHS Trigger: GCTGTGTGAGGGCCCTTTCCATACAGAGGCTGTGGT...CAAGTTGAAGGCCAAGTCTAGCAATTTCCACAAATGACCATGTAGGCCTTTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| CDS-3UTR CCA 90 bp | GGAATTCCAATGTGGGCTCAATGGCAAACAAAATTTACCTTACACAGACATTGGACCACAGCCTCTGTATaGAAAGGGCCCTCACACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GIPMWAQWQTKFTLHRHWTTASV*KGPSHS Trigger: GCTGTGTGAGGGCCCTTTCCATACAGAGGCTGTGGT...CCAATGTCTGTGTAAGGTAAATTTTGTTTGCCATTGAGCCCACATTGGAATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR CAA 72 bp | AAAGTGTGGCTCTCAGTTTATCACCTGCTCACCACATaGGCTCTAGTTTGGATGACTACAGGAGCATCAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KVWLSVYHLLTT*ALVWMTTGASV Trigger: GACTGATGCTCCTGTAGTCATCCAAACTAGAGCCAATGTGGTGAGCAGGTGATAAACTGAGAGCCACACTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| CDS-3UTR CCA 90 bp | GGAATTCCAATGTGGGCTCAATGGCAAACAAAATTTACCTTACACAGACATTGGTGGAGCAGGATTTGGTaGCTGCCTGGTATAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: GIPMWAQWQTKFTLHRHWWSRIW*LPGIGH Trigger: GTGTCCTATACCAGGCAGCCACCAAATCCTGCTCCA...CCAATGTCTGTGTAAGGTAAATTTTGTTTGCCATTGAGCCCACATTGGAATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR CAA 72 bp | AAAAGAGAGGGATGTTTGGAAAAACCCTGTGATCTCTaGGCAAGCACAGCATTGGAAGTAAAGGCACTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KREGCLEKPCDL*ASTALEVKALR Trigger: TCTCAGTGCCTTTACTTCCAATGCTGTGCTTGCCAAGAGATCACAGGGTTTTTCCAAACATCCCTCTCTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CAA 72 bp | AACAGCATGACCAAAGCCACTTCAGGAGGAAAGGCTTaGTTCAGCTTATGCTTCCATATCACAGTTCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: NSMTKATSGGKA*FSLCFHITVHH Trigger: GTGATGAACTGTGATATGGAAGCATAAGCTGAACAAAGCCTTTCCTCCTGAAGTGGCTTTGGTCATGCTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCTGCTTATAGAATTCAACCACTTTTCTAGTACAGAGTCCCAAAGATTTTGGAGCAGGATTTGGTaGCTGCCTGGTATAGGACAC | + |
|
Preference number: 4 (lower is better) Translates to: KALLIEFNHFSSTESQRFWSRIW*LPGIGH Trigger: GTGTCCTATACCAGGCAGCCACCAAATCCTGCTCCA...AAATCTTTGGGACTCTGTACTAGAAAAGTGGTTGAATTCTATAAGCAGGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR CAA 72 bp | GCCAAAGTGAGACCAAAGTTCCAGAGACAGGGTTTATaGCTTTCAAAAACAAGACATGTGAGTGGCCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: AKVRPKFQRQGL*LSKTRHVSGHD Trigger: ATCATGGCCACTCACATGTCTTGTTTTTGAAAGCAATAAACCCTGTCTCTGGAACTTTGGTCTCACTTTGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CAA 72 bp | TTGGAAGTAAAGGCACTGAGAGTAAGGACATTATCATaGTCACATCAGAGCAAGAGGAGCAAGATTAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LEVKALRVRTLS*SHQSKRSKIRR Trigger: CCTTCTAATCTTGCTCCTCTTGCTCTGATGTGACAATGATAATGTCCTTACTCTCAGTGCCTTTACTTCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CAA 72 bp | AACTCTGCCAAGTGTCAGATAGAAGAACAATTCTCTTaGCATCTTGAGCATGTCACCAAGAAAGCAAGACAG | + |
|
Preference number: 4 (lower is better) Translates to: NSAKCQIEEQFS*HLEHVTKKARQ Trigger: CTGTCTTGCTTTCTTGGTGACATGCTCAAGATGCAAAGAGAATTGTTCTTCTATCTGACACTTGGCAGAGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CAA 72 bp | GGTCATTTGTGGAAATTGCTAGACTTGGCCTTCAACTaGGAATTATATGAGGAGATACAGATATTCTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GHLWKLLDLAFN*ELYEEIQIFSG Trigger: CCCAGAGAATATCTGTATCTCCTCATATAATTCCAAGTTGAAGGCCAAGTCTAGCAATTTCCACAAATGACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR CAA 72 bp | AGAGACCATAAAGGCCTACATGGTCATTTGTGGAAATaGCTAGACTTGGCCTTCAACTTGGAATTATATGAG | + |
|
Preference number: 4 (lower is better) Translates to: RDHKGLHGHLWK*LDLAFNLELYE Trigger: CTCATATAATTCCAAGTTGAAGGCCAAGTCTAGCAATTTCCACAAATGACCATGTAGGCCTTTATGGTCTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR CAA 72 bp | GCCTGGGAGCACAGTGGTGTGAATGCAATCAACATATaGGCCCTCAAATTTATGAAACATAGAATCTTTAGT | + |
|
Preference number: 4 (lower is better) Translates to: AWEHSGVNAINI*ALKFMKHRIFS Trigger: ACTAAAGATTCTATGTTTCATAAATTTGAGGGCCAATATGTTGATTGCATTCACACCACTGTGCTCCCAGGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| 3UTR CAA 72 bp | GTTAAAGCCACAAGTGATAGAAGAGAGAAGAAATGTTaGGACCATGTAGTCGTCTTGATTGTAAACAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VKATSDRREKKC*DHVVVLIVNSR Trigger: TCTGCTGTTTACAATCAAGACGACTACATGGTCCAAACATTTCTTCTCTCTTCTATCACTTGTGGCTTTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| 3UTR CAA 72 bp | AGAGAGGTTGTCAGTTTTGGACAAGATGCCATGGAATaGCTAGGACAAGGAACAAAGATTAGAGCATTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: REVVSFGQDAME*LGQGTKIRALK Trigger: TTTTAATGCTCTAATCTTTGTTCCTTGTCCTAGCAATTCCATGGCATCTTGTCCAAAACTGACAACCTCTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR CAA 72 bp | TTTCAATCTCTCTTTCTGGGGCATATACTTCTCCCATaGCTCGGAACTAATCACTCTATAACAAATGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: FQSLFLGHILLP*LGTNHSITNET Trigger: TGTTTCATTTGTTATAGAGTGATTAGTTCCGAGCAATGGGAGAAGTATATGCCCCAGAAAGAGAGATTGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||
| 3UTR CAA 72 bp | GTTATAGGTAGCCCAATCTGCAAATGCCCAAGTTTCTaGTATCAAATGGCACAGTTTATAACCACAAACATA | + |
|
Preference number: 4 (lower is better) Translates to: VIGSPICKCPSF*YQMAQFITTNI Trigger: TATGTTTGTGGTTATAAACTGTGCCATTTGATACAAGAAACTTGGGCATTTGCAGATTGGGCTACCTATAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000145608.7 |
||
| CDS-3UTR CAA 90 bp | CTTGATCAGCCGTTCCCTGATGCAATCCCAGGGGCAGCTCTGACTGTGCTTCTTATATGGCGGTCCCATTaGCTGTGCTCCTGGAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LDQPFPDAIPGAALTVLLIWRSH*LCSWSR Trigger: CCTGCTCCAGGAGCACAGCAAATGGGACCGCCATAT...AAGAAGCACAGTCAGAGCTGCCCCTGGGATTGCATCAGGGAACGGCTGATCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| CDS-3UTR CAA 90 bp | ACAGCCCCACAGCTTCTATTAGGAGAATGGGCTGGGATGGTGGATAGTGTCTCTGAGGGGGTGGGTAAGTaGTGCCTCCGTGAGGTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: TAPQLLLGEWAGMVDSVSEGVGK*CLREVN Trigger: ATTCACCTCACGGAGGCACAACTTACCCACCCCCTC...AGAGACACTATCCACCATCCCAGCCCATTCTCCTAATAGAAGCTGTGGGGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114297.5 |
||
| CDS-3UTR CAA 90 bp | GGCCTACATGGTCATTTGTGGAAATTGCTAGACTTGGCCTTCAACTTGGAATTAACTCTGGAGCAGGATTaGGTGGCTGCCTGGTATAGG | + |
|
Preference number: 5 (lower is better) Translates to: GLHGHLWKLLDLAFNLELTLEQD*VAAWYR Trigger: CCTATACCAGGCAGCCACCAAATCCTGCTCCAGAGT...TAATTCCAAGTTGAAGGCCAAGTCTAGCAATTTCCACAAATGACCATGTAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127485.8 |
||