Pregenerated sensors for VMN2R94 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090417Ensembl transcript IDs: ENSMUST00000172190.4, ENSMUST00000231457.2, ENSMUST00000231815.3
Found 216 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCTCAAGGAGAGGTCCCAATGCCCGAAACTATTACTGAGGCTATaGAGCACTCACAAAAAGGGACCTATCATGACTGCCCTCCAAAAG | + |
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Preference number: 1 (lower is better) Translates to: LLKERSQCPKLLLRL*STHKKGPIMTALQK Trigger: CTTTTGGAGGGCAGTCATGATAGGTCCCTTTTTGTGAGTGCTCCATAGCCTCAGTAATAGTTTCGGGCATTGGGACCTCTCCTTGAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR TCA 90 bp | GGAAACCCCAAAATGTTCAAGATTCCAGAGCCATGGGAAATATGGTaGGGAAAGCTGGTAGCAGGGATTGGAACCAGCCCAGAAGAAAGA | + |
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Preference number: 1 (lower is better) Translates to: GNPKMFKIPEPWEIW*GKLVAGIGTSPEER Trigger: TCTTTCTTCTGGGCTGGTTCCAATCCCTGCTACCAGCTTTCCTCACCATATTTCCCATGGCTCTGGAATCTTGAACATTTTGGGGTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR CCA 90 bp | TCCAGAGCCATGGGAAATATGGTGAGGAAAGCTGGTAGCAGGGATTaGAACCAGCCCAGAAGAAAGAAGTTTATTGCAGTCAACAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: SRAMGNMVRKAGSRD*NQPRRKKFIAVNKD Trigger: ATCTTTGTTGACTGCAATAAACTTCTTTCTTCTGGGCTGGTTCCAATCCCTGCTACCAGCTTTCCTCACCATATTTCCCATGGCTCTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR TCA 90 bp | TTCAGTGCAAGATCCCAGTGTACTGGAGATACCACTGGCATGGGATaGTCACTAAAATGCAAAATTAGAGTGGAGTCAACCAGAAACTGG | + |
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Preference number: 1 (lower is better) Translates to: FSARSQCTGDTTGMG*SLKCKIRVESTRNW Trigger: CCAGTTTCTGGTTGACTCCACTCTAATTTTGCATTTTAGTGATCATCCCATGCCAGTGGTATCTCCAGTACACTGGGATCTTGCACTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR TCA 90 bp | TTTCAAACATTTGACCACCAAACAGGCATCATATACCAGCTGATATaGGGTTCCAACACACATAGAGTAGAGGACTGTGGGGGTCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: FQTFDHQTGIIYQLI*GSNTHRVEDCGGLC Trigger: ACACAGACCCCCACAGTCCTCTACTCTATGTGTGTTGGAACCTCATATCAGCTGGTATATGATGCCTGTTTGGTGGTCAAATGTTTGAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR TCA 90 bp | GCTGAACCCTTGTTGCACAAAAGGATGATGTGTCCATGTTCAGTGTaGGCATCTTGGTCAATGAATGGTGGAGAAGTTGTCATCCATATT | + |
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Preference number: 1 (lower is better) Translates to: AEPLLHKRMMCPCSV*ASWSMNGGEVVIHI Trigger: AATATGGATGACAACTTCTCCACCATTCATTGACCAAGATGCTCACACTGAACATGGACACATCATCCTTTTGTGCAACAAGGGTTCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| 3UTR GCA 90 bp | CAACAAGATAATGTAACACTTGGGACCAAATATGAAGGCAAGGAGTaGTGTGCTGGAAGCCAAGATAGAGAATACTTCCATGGCTACCAT | + |
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Preference number: 1 (lower is better) Translates to: QQDNVTLGTKYEGKE*CAGSQDREYFHGYH Trigger: ATGGTAGCCATGGAAGTATTCTCTATCTTGGCTTCCAGCACAGCACTCCTTGCCTTCATATTTGGTCCCAAGTGTTACATTATCTTGTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| 3UTR TCA 90 bp | TTGTGGTTATCGGGGAGAATGAGACCAACCCATGACCACCTAAAATaGACCATCAAAGAAACAATGGCAAGTGTAAGAGATGTGTCTTTG | + |
|
Preference number: 1 (lower is better) Translates to: LWLSGRMRPTHDHLK*TIKETMASVRDVSL Trigger: CAAAGACACATCTCTTACACTTGCCATTGTTTCTTTGATGGTTCATTTTAGGTGGTCATGGGTTGGTCTCATTCTCCCCGATAACCACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
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| 3UTR CCA 90 bp | ATGAATGGTGGAGAAGTTGTCATCCATATTCCACAAATAAGAAGCTaGATCAGGGTGCAGATAGGAATGATGTATCTTGGACCCCATGAT | + |
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Preference number: 1 (lower is better) Translates to: MNGGEVVIHIPQIRS*IRVQIGMMYLGPHD Trigger: ATCATGGGGTCCAAGATACATCATTCCTATCTGCACCCTGATCCAGCTTCTTATTTGTGGAATATGGATGACAACTTCTCCACCATTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| 3UTR CCA 90 bp | AACCAGAAACTGGAGTGCTTTACAGGAGAAATAATGCAGGTCCTTTaGAGGAGCCTAGAAAATCTTGTACAGATTCTAGGCATTGAAAGT | + |
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Preference number: 1 (lower is better) Translates to: NQKLECFTGEIMQVL*RSLENLVQILGIES Trigger: ACTTTCAATGCCTAGAATCTGTACAAGATTTTCTAGGCTCCTCCAAAGGACCTGCATTATTTCTCCTGTAAAGCACTCCAGTTTCTGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR TCA 90 bp | AAATTGTGCAGAATCACCTACACGGTAGTAGTCAACATGCACAAATaGATCCTTGTTGAGGGATATAGAGAAGCTTCTACTAAGACTTCA | + |
|
Preference number: 1 (lower is better) Translates to: KLCRITYTVVVNMHK*ILVEGYREASTKTS Trigger: TGAAGTCTTAGTAGAAGCTTCTCTATATCCCTCAACAAGGATTCATTTGTGCATGTTGACTACTACCGTGTAGGTGATTCTGCACAATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| 3UTR TCA 90 bp | AATCAAATCCAAGAGATATGTTGGGTAAAATATAGGGGTTCCCATTaGTCTCCTCAATGGCAAATAGCAGAGCCAGAATATACTGGTAGT | + |
|
Preference number: 1 (lower is better) Translates to: NQIQEICWVKYRGSH*SPQWQIAEPEYTGS Trigger: ACTACCAGTATATTCTGGCTCTGCTATTTGCCATTGAGGAGATCAATGGGAACCCCTATATTTTACCCAACATATCTCTTGGATTTGATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
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| 3UTR GCA 90 bp | TCTGGCTTTTTGACTTTCACTGTTCTCATTATATATATATGGTTGTaGCAATGTTACCTAAGTAATATGGGAGGAGTAGGTTTCCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: SGFLTFTVLIIYIWL*QCYLSNMGGVGFPP Trigger: TGGAGGGAAACCTACTCCTCCCATATTACTTAGGTAACATTGGCACAACCATATATATATAATGAGAACAGTGAAAGTCAAAAAGCCAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| 3UTR GCA 90 bp | AATAACAAAGGAAGTCCCAAGAAGCTGAACAGAGACTTTCATCTCTaGTTAAGTCTCATGAAGAGCATGAAGAACATTTTCATACAAGCA | + |
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Preference number: 1 (lower is better) Translates to: NNKGSPKKLNRDFHL*LSLMKSMKNIFIQA Trigger: TGCTTGTATGAAAATGTTCTTCATGCTCTTCATGAGACTTAAGCAGAGATGAAAGTCTCTGTTCAGCTTCTTGGGACTTCCTTTGTTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR CCA 90 bp | AGCTGTTCTGGCTTTTTGACTTTCACTGTTCTCATTATATATATATaGTTGTGCCAATGTTACCTAAGTAATATGGGAGGAGTAGGTTTC | + |
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Preference number: 1 (lower is better) Translates to: SCSGFLTFTVLIIYI*LCQCYLSNMGGVGF Trigger: GAAACCTACTCCTCCCATATTACTTAGGTAACATTGGCACAACCATATATATATAATGAGAACAGTGAAAGTCAAAAAGCCAGAACAGCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| 3UTR TCA 90 bp | AGAAATGAAAAGGAAGATTTTCTATCAAGTAAGGATATACACATTTaGAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGAT | + |
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Preference number: 1 (lower is better) Translates to: RNEKEDFLSSKDIHI*NDTGMEASGLRLRD Trigger: ATCTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTCAAATGTGTATATCCTTACTTGATAGAAAATCTTCCTTTTCATTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| 3UTR GCA 90 bp | TATATCTTGTATGCTTGTTGGGTATTTGCCTTGATATATGCTAGATaGTTTGCCCTTAAGCCCTTTTGTTCAGCATTTTGCTGTTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: YILYACWVFALIYAR*FALKPFCSAFCCLK Trigger: TTTTAAACAGCAAAATGCTGAACAAAAGGGCTTAAGGGCAAAGCATCTAGCATATATCAAGGCAAATACCCAACAAGCATACAAGATATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| 3UTR CAA 90 bp | GTGCCATCCCCAGGGGGTCTTCATAGGCCAGAAAGCTCACAGATTTaGGAAAGCAGTGGTCCTTCTCTGTATTTGCATAATGACTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: VPSPGGLHRPESSQI*ESSGPSLYLHNDSL Trigger: CAGAGAGTCATTATGCAAATACAGAGAAGGACCACTGCTTTCCAAAATCTGTGAGCTTTCTGGCCTATGAAGACCCCCTGGGGATGGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| 3UTR-3UTR TCA 90 bp | TATAACTCCCAAGGGCCAAGATACAGAGATATCCCAGGACGGAGTGGAAGGCGAAAAGTAGTGGACATCTaGAGACCTCATTGGCATCAG | + |
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Preference number: 2 (lower is better) Translates to: YNSQGPRYRDIPGRSGRRKVVDI*RPHWHQ Trigger: CTGATGCCAATGAGGTCTTCAGATGTCCACTACTTT...TCGCCTTCCACTCCGTCCTGGGATATCTCTGTATCTTGGCCCTTGGGAGTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTCTGCTGAAGGATGCAGGCGACTGTGTTTGGCTTACCAATGAAGTTCAATGGAATTTGCCCAACTaGTTCATGTCTCGCTTTGGC | + |
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Preference number: 2 (lower is better) Translates to: GGLLKDAGDCVWLTNEVQWNLPN*FMSRFG Trigger: GCCAAAGCGAGACATGAACCAGTTGGGCAAATTCCA...TTGAACTTCATTGGTAAGCCAAACACAGTCGCCTGCATCCTTCAGCAGACCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR CAA 90 bp | CTCCCTGGAAAACTGACCTTAAAGGCAAGGACCACAGTAATAGCTTaGGCCAACACAGTGGCAAGAGCCACAGTGAAAGCAATTGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LPGKLTLKARTTVIA*ANTVARATVKAIAK Trigger: CTTTGCAATTGCTTTCACTGTGGCTCTTGCCACTGTGTTGGCCAAAGCTATTACTGTGGTCCTTGCCTTTAAGGTCAGTTTTCCAGGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| 3UTR-3UTR CCA 90 bp | AGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTCAAATAGCCTGCCCACCTGGCAACATGTaGGTGGGGAGGAGATATGGG | + |
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Preference number: 2 (lower is better) Translates to: RLHLAIPSSSKQQTQIACPPGNM*VGRRYG Trigger: CCCATATCTCCTCCCCACCCACATGTTGCCAGGTGG...GCAGGCTATTTGAGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR-3UTR TCA 90 bp | GAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGATGCTGAATCACTCAAATAGCCTGCAATaGGGCCTGGATAGGACAAGT | + |
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Preference number: 2 (lower is better) Translates to: EMIQEWRRQDLDSEMLNHSNSLQ*GLDRTS Trigger: ACTTGTCCTATCCAGGCCTCATTGCAGGCTATTTGA...GTGATTCAGCATCTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| 3UTR-3UTR TCA 90 bp | TTCATAGGCCAGAAAGCTCACAGATTTTGGAAAGCAGTGGTCCTTCTCTGTATTCCATGGGAAATATGGTaGGGAAAGCTGGTAGCAGGG | + |
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Preference number: 2 (lower is better) Translates to: FIGQKAHRFWKAVVLLCIPWEIW*GKLVAG Trigger: CCCTGCTACCAGCTTTCCTCACCATATTTCCCATGG...AATACAGAGAAGGACCACTGCTTTCCAAAATCTGTGAGCTTTCTGGCCTATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR-3UTR TCA 90 bp | TGGTGGAGAAGTTGTCATCCATATTCCACAAATAAGAAGCTGGATCAGGGTGCATGTGACTTGGCGTTGTaGGAAGCCAGGAAATGGCAT | + |
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Preference number: 2 (lower is better) Translates to: WWRSCHPYSTNKKLDQGACDLAL*EARKWH Trigger: ATGCCATTTCCTGGCTTCTCACAACGCCAAGTCACA...TGCACCCTGATCCAGCTTCTTATTTGTGGAATATGGATGACAACTTCTCCACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR-3UTR TCA 90 bp | GTGTCCATGTTCAGTGTGAGCATCTTGGTCAATGAATGGTGGAGAAGTTGTCATGGCAGATGTTATCCATaGTGTTCCTGTGAGTGCAGC | + |
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Preference number: 2 (lower is better) Translates to: VSMFSVSILVNEWWRSCHGRCYP*CSCECS Trigger: GCTGCACTCACAGGAACATCATGGATAACATCTGCC...ATGACAACTTCTCCACCATTCATTGACCAAGATGCTCACACTGAACATGGACAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
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| 3UTR-3UTR CCA 90 bp | CAGAAACTGGAGTGCTTTACAGGAGAAATAATGCAGGTCCTTTGGAGGAGCCTACACTATTTGTTGTTGTaGCCTTCTTGTGGGCATGGG | + |
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Preference number: 2 (lower is better) Translates to: QKLECFTGEIMQVLWRSLHYLLL*PSCGHG Trigger: CCCATGCCCACAAGAAGGCCACAACAACAAATAGTG...TAGGCTCCTCCAAAGGACCTGCATTATTTCTCCTGTAAAGCACTCCAGTTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR-3UTR CCA 90 bp | TTCATAGGCCAGAAAGCTCACAGATTTTGGAAAGCAGTGGTCCTTCTCTGTATTGCTGGTAGCAGGGATTaGAACCAGCCCAGAAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: FIGQKAHRFWKAVVLLCIAGSRD*NQPRRK Trigger: CTTTCTTCTGGGCTGGTTCCAATCCCTGCTACCAGC...AATACAGAGAAGGACCACTGCTTTCCAAAATCTGTGAGCTTTCTGGCCTATGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTCTGCTGAAGGATGCAGGCGACTGTGTTTGGCTTACCAATGAAGTTCAAGTAATGAATCGTGGATaGATGGGTTGTAATAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: GGLLKDAGDCVWLTNEVQVMNRG*MGCNRR Trigger: CCTTCTATTACAACCCATTCATCCACGATTCATTAC...TTGAACTTCATTGGTAAGCCAAACACAGTCGCCTGCATCCTTCAGCAGACCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGAAGGATGCAGGCGACTGTGTTTGGCTTACCAATGAAGTTCAAGGAACAGAGTCAACCAGAAACTaGAGTGCTTTACAGGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: LLKDAGDCVWLTNEVQGTESTRN*SALQEK Trigger: TTTCTCCTGTAAAGCACTCCAGTTTCTGGTTGACTC...TGTTCCTTGAACTTCATTGGTAAGCCAAACACAGTCGCCTGCATCCTTCAGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR-3UTR CCA 90 bp | AGGATATACACATTTGAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCATCTGCCATGGCTGCCTaGATGCTGTCATTCTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: RIYTFEMIQEWRRQDLDSSAMAA*MLSFSC Trigger: ACAGGAGAATGACAGCATCCAGGCAGCCATGGCAGA...TGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTCAAATGTGTATATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR CAA 90 bp | TGGTATGGTAGTGTGAATGGGCTTGACCCAGAAAGTGGCACTATTTaGAAGTATGGTCTTGTTAAAGAAGTATGCCACTGTGGAAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: WYGSVNGLDPESGTI*KYGLVKEVCHCGSG Trigger: CCCACTTCCACAGTGGCATACTTCTTTAACAAGACCATACTTCAAAATAGTGCCACTTTCTGGGTCAAGCCCATTCACACTACCATACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTCTGCTGAAGGATGCAGGCGACTGTGTTTGGCTTACCAATGAAGTTCAACCAGCAATTCTTAGATaGTTTAAATCACCAGAAAGG | + |
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Preference number: 2 (lower is better) Translates to: GGLLKDAGDCVWLTNEVQPAILR*FKSPER Trigger: CCTTTCTGGTGATTTAAATCATCTAAGAATTGCTGG...TTGAACTTCATTGGTAAGCCAAACACAGTCGCCTGCATCCTTCAGCAGACCACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCTGAAGGATGCAGGCGACTGTGTTTGGCTTACCAATGAAGTTCAAGGAACAGTTGGGTATTTGCCTTaGTATATGCTAGATGCTTTG | + |
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Preference number: 2 (lower is better) Translates to: LLKDAGDCVWLTNEVQGTVGYLP*YMLDAL Trigger: CAAAGCATCTAGCATATATCAAGGCAAATACCCAAC...TGTTCCTTGAACTTCATTGGTAAGCCAAACACAGTCGCCTGCATCCTTCAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| 3UTR-3UTR TCA 90 bp | TTCATAGGCCAGAAAGCTCACAGATTTTGGAAAGCAGTGGTCCTTCTCTGTATTGATAAAGACAACTGTTaGCCCTGGGGAGCATTTGCA | + |
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Preference number: 2 (lower is better) Translates to: FIGQKAHRFWKAVVLLCIDKDNC*PWGAFA Trigger: TGCAAATGCTCCCCAGGGTCAACAGTTGTCTTTATC...AATACAGAGAAGGACCACTGCTTTCCAAAATCTGTGAGCTTTCTGGCCTATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCATGTTCAGTGTGAGCATCTTGGTCAATGAATGGTGGAGAAGTTGTCATTATATCTCAGCCTTCTaGAGACAAAGCCACGCAGAT | + |
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Preference number: 2 (lower is better) Translates to: VSMFSVSILVNEWWRSCHYISAF*RQSHAD Trigger: ATCTGCGTGGCTTTGTCTCCAGAAGGCTGAGATATA...ATGACAACTTCTCCACCATTCATTGACCAAGATGCTCACACTGAACATGGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR-3UTR TCA 90 bp | AGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTCAAATAGCCTGCTCAAATAGCCTGCAATaGGGCCTGGATAGGACAAGT | + |
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Preference number: 2 (lower is better) Translates to: RLHLAIPSSSKQQTQIACSNSLQ*GLDRTS Trigger: ACTTGTCCTATCCAGGCCTCATTGCAGGCTATTTGA...GCAGGCTATTTGAGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| 3UTR-3UTR TCA 90 bp | TGGTGGAGAAGTTGTCATCCATATTCCACAAATAAGAAGCTGGATCAGGGTGCACTAGTAGCCTTCAGATaGAGATGTAGAATTCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: WWRSCHPYSTNKKLDQGALVAFR*RCRILC Trigger: GCAGAGAATTCTACATCTTCATCTGAAGGCTACTAG...TGCACCCTGATCCAGCTTCTTATTTGTGGAATATGGATGACAACTTCTCCACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR-3UTR TCA 90 bp | ATGGGAGGAGTAGGTTTCCCTCCAAGGATCATGGAATATCTGCAACTGGATAGATGCAGTCAACAAAGATaGAAAAGTAGTGGACATCTG | + |
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Preference number: 2 (lower is better) Translates to: MGGVGFPPRIMEYLQLDRCSQQR*KSSGHL Trigger: CAGATGTCCACTACTTTTTCATCTTTGTTGACTGCA...TCTATCCAGTTGCAGATATTCCATGATCCTTGGAGGGAAACCTACTCCTCCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR-3UTR TCA 90 bp | GAAGCTGAACAGAGACTTTCATCTCTGCTTAAGTCTCATGAAGAGCATGAAGAAATGAGAGGTTATTGGTaGAGCCTGGCTTCAGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: EAEQRLSSLLKSHEEHEEMRGYW*SLASVQ Trigger: TTGCACTGAAGCCAGGCTTCACCAATAACCTCTCAT...TTCTTCATGCTCTTCATGAGACTTAAGCAGAGATGAAAGTCTCTGTTCAGCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR-3UTR TCA 90 bp | AGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTCAAATAGCCTGCATACAGGACATCAAATaGGGAATGGGGTTGCCATCC | + |
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Preference number: 2 (lower is better) Translates to: RLHLAIPSSSKQQTQIACIQDIK*GMGLPS Trigger: GGATGGCAACCCCATTCCTCATTTGATGTCCTGTAT...GCAGGCTATTTGAGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR-3UTR GCA 90 bp | ACCCAGACACAGAAGAACACCAACATGCTGAATGACAGAAATTTGGATTCATTGGCCTACAACTCTTACTaGACACAGACTGAGGGATCT | + |
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Preference number: 2 (lower is better) Translates to: TQTQKNTNMLNDRNLDSLAYNSY*TQTEGS Trigger: AGATCCCTCAGTCTGTGTGCAGTAAGAGTTGTAGGC...CAATGAATCCAAATTTCTGTCATTCAGCATGTTGGTGTTCTTCTGTGTCTGGGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
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| 3UTR CAA 90 bp | CTATTTGTTGTTGTGGCCTTCTTGTGGGCATGGGCTTTAAGAACCTaGTCTTATGTGTTAAGAAACCAGTCTCTTACTAGTAGCCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: LFVVVAFLWAWALRT*SYVLRNQSLTSSLQ Trigger: CTGAAGGCTACTAGTAAGAGACTGGTTTCTTAACACATAAGACAAGGTTCTTAAAGCCCATGCCCACAAGAAGGCCACAACAACAAATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| 3UTR-3UTR TCA 90 bp | AATATGAAGGCAAGGAGTGCTGTGCTGGAAGCCAAGATAGAGAATACTTCCATGTATACACATTTGAAATaGTACAGGAATGGAGGCGTC | + |
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Preference number: 2 (lower is better) Translates to: NMKARSAVLEAKIENTSMYTHLK*YRNGGV Trigger: GACGCCTCCATTCCTGTATCATTTCAAATGTGTATA...CATGGAAGTATTCTCTATCTTGGCTTCCAGCACAGCACTCCTTGCCTTCATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR TCA 90 bp | AATATGAAGGCAAGGAGTGCTGTGCTGGAAGCCAAGATAGAGAATACTTCCATGGCTGTTCTGGCTTTTTaGCTTTCACTGTTCTCATTA | + |
|
Preference number: 2 (lower is better) Translates to: NMKARSAVLEAKIENTSMAVLAF*LSLFSL Trigger: TAATGAGAACAGTGAAAGTCAAAAAGCCAGAACAGC...CATGGAAGTATTCTCTATCTTGGCTTCCAGCACAGCACTCCTTGCCTTCATATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR TCA 90 bp | AGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTCAAATAGCCTGCCATGAGAAGAGACTATaGGAGGTTATTGGTGAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: RLHLAIPSSSKQQTQIACHEKRL*EVIGEA Trigger: GGCTTCACCAATAACCTCTCATAGTCTCTTCTCATG...GCAGGCTATTTGAGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR-3UTR TCA 90 bp | AATATGGGAGGAGTAGGTTTCCCTCCAAGGATCATGGAATATCTGCAACTGGATTATGTTCAATGTTCATaGCCCAGACAATCCATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: NMGGVGFPPRIMEYLQLDYVQCS*PRQSMS Trigger: TGACATGGATTGTCTGGGTCATGAACATTGAACATA...ATCCAGTTGCAGATATTCCATGATCCTTGGAGGGAAACCTACTCCTCCCATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR-3UTR GCA 90 bp | AATATGAAGGCAAGGAGTGCTGTGCTGGAAGCCAAGATAGAGAATACTTCCATGCCATTGCTCTTTCTCTaGCTTGATAGACTGAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: NMKARSAVLEAKIENTSMPLLFL*LDRLKS Trigger: AGATTTCAGTCTATCAAGGCAGAGAAAGAGCAATGG...CATGGAAGTATTCTCTATCTTGGCTTCCAGCACAGCACTCCTTGCCTTCATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CCA 90 bp | AATATGAAGGCAAGGAGTGCTGTGCTGGAAGCCAAGATAGAGAATACTTCCATGTGGAGTTCCATAATTTaGAATTTGCCCAACTGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: NMKARSAVLEAKIENTSMWSSII*NLPNWF Trigger: GAACCAGTTGGGCAAATTCCAAATTATGGAACTCCA...CATGGAAGTATTCTCTATCTTGGCTTCCAGCACAGCACTCCTTGCCTTCATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CAA 90 bp | CTTGTTGCACAAAAGGATGATGTGTCCATGTTCAGTGTGAGCATCTaGGTCAATGAATGGTGGAGAAGTTGTCATCCATATTCCACAAAT | + |
|
Preference number: 2 (lower is better) Translates to: LVAQKDDVSMFSVSI*VNEWWRSCHPYSTN Trigger: ATTTGTGGAATATGGATGACAACTTCTCCACCATTCATTGACCAAGATGCTCACACTGAACATGGACACATCATCCTTTTGTGCAACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR TCA 90 bp | AGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTCAAATAGCCTGCAATGAGACCAACCCATaGCCACCTAAAATGAACCAT | + |
|
Preference number: 2 (lower is better) Translates to: RLHLAIPSSSKQQTQIACNETNP*PPKMNH Trigger: ATGGTTCATTTTAGGTGGTCATGGGTTGGTCTCATT...GCAGGCTATTTGAGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGTGGAGAAGTTGTCATCCATATTCCACAAATAAGAAGCTGGATCAGGGTGCACTAAAACAGCTGTTCTaGCTTTTTGACTTTCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: WWRSCHPYSTNKKLDQGALKQLF*LFDFHC Trigger: ACAGTGAAAGTCAAAAAGCCAGAACAGCTGTTTTAG...TGCACCCTGATCCAGCTTCTTATTTGTGGAATATGGATGACAACTTCTCCACCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGTCCATGTTCAGTGTGAGCATCTTGGTCAATGAATGGTGGAGAAGTTGTCATATCCAAGAGATATGTTaGGTAAAATATAGGGGTTCC | + |
|
Preference number: 2 (lower is better) Translates to: VSMFSVSILVNEWWRSCHIQEIC*VKYRGS Trigger: GGAACCCCTATATTTTACCCAACATATCTCTTGGAT...ATGACAACTTCTCCACCATTCATTGACCAAGATGCTCACACTGAACATGGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR CAA 90 bp | ATCTTTAAACAACCATATGGGACCCAAGGAGTAGAAAGACCTAGTTaGAAAATACTTGGTATAGGGAGAGGCACTATTTGTTGTTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: IFKQPYGTQGVERPS*KILGIGRGTICCCG Trigger: GCCACAACAACAAATAGTGCCTCTCCCTATACCAAGTATTTTCAAACTAGGTCTTTCTACTCCTTGGGTCCCATATGGTTGTTTAAAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CAA 90 bp | ACAGTGCAAGTTCCAAGTAGAGAAAAGGTTAAATCCAGGTGTACTTaGTTTTATATCTCAGCCTTCTGGAGACAAAGCCACGCAGATTTT | + |
|
Preference number: 2 (lower is better) Translates to: TVQVPSREKVKSRCT*FYISAFWRQSHADF Trigger: AAAATCTGCGTGGCTTTGTCTCCAGAAGGCTGAGATATAAAACAAAGTACACCTGGATTTAACCTTTTCTCTACTTGGAACTTGCACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR-3UTR TCA 90 bp | AAGATGCCAATAACAAAGGCAGTGAATGCAGATAAGCACAAAGCTATGCTGCCTCCAGCAATTCTTAGATaGTTTAAATCACCAGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KMPITKAVNADKHKAMLPPAILR*FKSPER Trigger: CCTTTCTGGTGATTTAAATCATCTAAGAATTGCTGG...AGGCAGCATAGCTTTGTGCTTATCTGCATTCACTGCCTTTGTTATTGGCATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR TCA 90 bp | AGGATATACACATTTGAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGTAATGAATCGTGGATaGATGGGTTGTAATAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: RIYTFEMIQEWRRQDLDSVMNRG*MGCNRR Trigger: CCTTCTATTACAACCCATTCATCCACGATTCATTAC...TGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTCAAATGTGTATATCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR TCA 90 bp | AGGATATACACATTTGAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGTCAACATGCACAAATaGATCCTTGTTGAGGGATAT | + |
|
Preference number: 2 (lower is better) Translates to: RIYTFEMIQEWRRQDLDSVNMHK*ILVEGY Trigger: ATATCCCTCAACAAGGATTCATTTGTGCATGTTGAC...TGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTCAAATGTGTATATCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR TCA 90 bp | AGGATATACACATTTGAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAAGAGATCATAATCTCTaGGGGAAAATCATCTGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: RIYTFEMIQEWRRQDLDSRDHNL*GKIIWD Trigger: ATCCCAGATGATTTTCCCTCAGAGATTATGATCTCT...TGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTCAAATGTGTATATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR-3UTR GCA 90 bp | ATTACATTATGTTGGTATGGTAGTGTGAATGGGCTTGACCCAGAAAGTGGCACTTTTGCTATTTCAGGCTaGAGGAAGAATACTCATGAA | + |
|
Preference number: 2 (lower is better) Translates to: ITLCWYGSVNGLDPESGTFAISG*RKNTHE Trigger: TTCATGAGTATTCTTCCTGCAGCCTGAAATAGCAAA...AGTGCCACTTTCTGGGTCAAGCCCATTCACACTACCATACCAACATAATGTAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR-3UTR GCA 90 bp | GAATCCTTGTTGAGGGATATAGAGAAGCTTCTACTAAGACTTCATTTAGCCATTCAAACTCAAATAGCCTaGAATGAGGCCTGGATAGGA | + |
|
Preference number: 2 (lower is better) Translates to: ESLLRDIEKLLLRLHLAIQTQIA*NEAWIG Trigger: TCCTATCCAGGCCTCATTGCAGGCTATTTGAGTTTG...AATGGCTAAATGAAGTCTTAGTAGAAGCTTCTCTATATCCCTCAACAAGGATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR GCA 90 bp | AAGATGCCAATAACAAAGGCAGTGAATGCAGATAAGCACAAAGCTATGCTGCCTAACCAGAAACTGGAGTaGTTTACAGGAGAAATAATG | + |
|
Preference number: 2 (lower is better) Translates to: KMPITKAVNADKHKAMLPNQKLE*FTGEIM Trigger: CATTATTTCTCCTGTAAAGCACTCCAGTTTCTGGTT...AGGCAGCATAGCTTTGTGCTTATCTGCATTCACTGCCTTTGTTATTGGCATCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTTCTACTAAGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTCACAGTGAAAGCAATTaGAAAGGTGGTCTGCTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: KLLLRLHLAIPSSSKQQTHSESN*KGGLLK Trigger: CTTCAGCAGACCACCTTTGCAATTGCTTTCACTGTG...AGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCTTAGTAGAAGCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CCA 90 bp | ATTACATTATGTTGGTATGGTAGTGTGAATGGGCTTGACCCAGAAAGTGGCACTCATTGGCATCAGACATaGAGTTCCATAATTTGGAAT | + |
|
Preference number: 2 (lower is better) Translates to: ITLCWYGSVNGLDPESGTHWHQT*SSIIWN Trigger: ATTCCAAATTATGGAACTCCATGTCTGATGCCAATG...AGTGCCACTTTCTGGGTCAAGCCCATTCACACTACCATACCAACATAATGTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR-3UTR CCA 90 bp | AATATGAAGGCAAGGAGTGCTGTGCTGGAAGCCAAGATAGAGAATACTTCCATGAATGATGAAGCTGATTaGAAACCCCAAAATGTTCAA | + |
|
Preference number: 2 (lower is better) Translates to: NMKARSAVLEAKIENTSMNDEAD*KPQNVQ Trigger: TTGAACATTTTGGGGTTTCCAATCAGCTTCATCATT...CATGGAAGTATTCTCTATCTTGGCTTCCAGCACAGCACTCCTTGCCTTCATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR-3UTR CCA 90 bp | AGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTCAAATAGCCTGCATCTTGGTCAATGAATaGTGGAGAAGTTGTCATCCA | + |
|
Preference number: 2 (lower is better) Translates to: RLHLAIPSSSKQQTQIACILVNE*WRSCHP Trigger: TGGATGACAACTTCTCCACCATTCATTGACCAAGAT...GCAGGCTATTTGAGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR CAA 90 bp | GAGGCGTCAGGACTTAGACTCAGAGATGCTGAATCACTAGAGCAATaGTGGTTTTCAAACATTGGAAATAAATGGCTTTCATACTATAAC | + |
|
Preference number: 2 (lower is better) Translates to: EASGLRLRDAESLEQ*WFSNIGNKWLSYYN Trigger: GTTATAGTATGAAAGCCATTTATTTCCAATGTTTGAAAACCACAATTGCTCTAGTGATTCAGCATCTCTGAGTCTAAGTCCTGACGCCTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR TCA 90 bp | GAATCCTTGTTGAGGGATATAGAGAAGCTTCTACTAAGACTTCATTTAGCCATTAGGAGATATGGGATGTaGAAATGTTGGAGTGTGGAT | + |
|
Preference number: 2 (lower is better) Translates to: ESLLRDIEKLLLRLHLAIRRYGM*KCWSVD Trigger: ATCCACACTCCAACATTTTCACATCCCATATCTCCT...AATGGCTAAATGAAGTCTTAGTAGAAGCTTCTCTATATCCCTCAACAAGGATTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR-3UTR TCA 90 bp | GTGCTCTCTTCACTCATGACAACATCAAATATGTGTCTAGGTAATAGATCCAAATATAGGGGTTCCCATTaGTCTCCTCAATGGCAAATA | + |
|
Preference number: 2 (lower is better) Translates to: VLSSLMTTSNMCLGNRSKYRGSH*SPQWQI Trigger: TATTTGCCATTGAGGAGATCAATGGGAACCCCTATA...TTTGGATCTATTACCTAGACACATATTTGATGTTGTCATGAGTGAAGAGAGCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGATATACACATTTGAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGGAAATTTAAAGAGTTaGAGCAATGTCCCAATTTGG | + |
|
Preference number: 2 (lower is better) Translates to: RIYTFEMIQEWRRQDLDSGNLKS*SNVPIW Trigger: CCAAATTGGGACATTGCTTCAACTCTTTAAATTTCC...TGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTCAAATGTGTATATCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGATATACACATTTGAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCACATGACCACCTAAAATaGACCATCAAAGAAACAATG | + |
|
Preference number: 2 (lower is better) Translates to: RIYTFEMIQEWRRQDLDSHDHLK*TIKETM Trigger: CATTGTTTCTTTGATGGTTCATTTTAGGTGGTCATG...TGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTCAAATGTGTATATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR-3UTR GCA 90 bp | ACCCAGACACAGAAGAACACCAACATGCTGAATGACAGAAATTTGGATTCATTGTTGATATATGCTAGATaGTTTGCCCTTAAGCCCTTT | + |
|
Preference number: 2 (lower is better) Translates to: TQTQKNTNMLNDRNLDSLLIYAR*FALKPF Trigger: AAAGGGCTTAAGGGCAAAGCATCTAGCATATATCAA...CAATGAATCCAAATTTCTGTCATTCAGCATGTTGGTGTTCTTCTGTGTCTGGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR GCA 90 bp | ATTACATTATGTTGGTATGGTAGTGTGAATGGGCTTGACCCAGAAAGTGGCACTATGATCAAGGGTTCATaGTATGGAAAAAGTAAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: ITLCWYGSVNGLDPESGTMIKGS*YGKSKN Trigger: GTTCTTACTTTTTCCATAGCATGAACCCTTGATCAT...AGTGCCACTTTCTGGGTCAAGCCCATTCACACTACCATACCAACATAATGTAAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR-3UTR GCA 90 bp | AGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTCAAATAGCCTGCGTTGGACTACCTAAATaGCTCTGTTCTCTTTTCATA | + |
|
Preference number: 2 (lower is better) Translates to: RLHLAIPSSSKQQTQIACVGLPK*LCSLFI Trigger: TATGAAAAGAGAACAGAGGCATTTAGGTAGTCCAAC...GCAGGCTATTTGAGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR-3UTR CCA 90 bp | ACCCAGACACAGAAGAACACCAACATGCTGAATGACAGAAATTTGGATTCATTGCTAAAACAGCTGTTCTaGCTTTTTGACTTTCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: TQTQKNTNMLNDRNLDSLLKQLF*LFDFHC Trigger: ACAGTGAAAGTCAAAAAGCCAGAACAGCTGTTTTAG...CAATGAATCCAAATTTCTGTCATTCAGCATGTTGGTGTTCTTCTGTGTCTGGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CCA 90 bp | GTCTGCTCTTGTGATATTTCGGTAAAGTATGTGATTTCCTTTTACCCTTGTCTATTCAAGGTCAATTTATaGAGCAAGTCCAAGGAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: VCSCDISVKYVISFYPCLFKVNL*SKSKES Trigger: GCTCTCCTTGGACTTGCTCCATAAATTGACCTTGAA...TAGACAAGGGTAAAAGGAAATCACATACTTTACCGAAATATCACAAGAGCAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CAA 90 bp | TTTGGAATTTGCCCAACTGGTTCATGTCTCGCTTTGGCAATTACATaGAAGACTTTGAATGAATTTCAGAAGGGACTTAGAACTTGGATT | + |
|
Preference number: 2 (lower is better) Translates to: FGICPTGSCLALAIT*KTLNEFQKGLRTWI Trigger: AATCCAAGTTCTAAGTCCCTTCTGAAATTCATTCAAAGTCTTCAATGTAATTGCCAAAGCGAGACATGAACCAGTTGGGCAAATTCCAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CAA 90 bp | TGCTTTCTGAGAGTAAAAGATGTTCTGTTCCAGAGATATCCAAGGTaGTATATTGAGCTGCATATGAACTTGATGTTAGAATCACGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: CFLRVKDVLFQRYPR*YIELHMNLMLESRR Trigger: CCTACGTGATTCTAACATCAAGTTCATATGCAGCTCAATATACAACCTTGGATATCTCTGGAACAGAACATCTTTTACTCTCAGAAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR-3UTR TCA 90 bp | GAATCCTTGTTGAGGGATATAGAGAAGCTTCTACTAAGACTTCATTTAGCCATTTATACACATTTGAAATaGTACAGGAATGGAGGCGTC | + |
|
Preference number: 2 (lower is better) Translates to: ESLLRDIEKLLLRLHLAIYTHLK*YRNGGV Trigger: GACGCCTCCATTCCTGTATCATTTCAAATGTGTATA...AATGGCTAAATGAAGTCTTAGTAGAAGCTTCTCTATATCCCTCAACAAGGATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR TCA 90 bp | GAATCCTTGTTGAGGGATATAGAGAAGCTTCTACTAAGACTTCATTTAGCCATTGTAATGAATCGTGGATaGATGGGTTGTAATAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: ESLLRDIEKLLLRLHLAIVMNRG*MGCNRR Trigger: CCTTCTATTACAACCCATTCATCCACGATTCATTAC...AATGGCTAAATGAAGTCTTAGTAGAAGCTTCTCTATATCCCTCAACAAGGATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR TCA 90 bp | AAGCTTCTACTAAGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTTGCTCTCTTCACTCATaGCAACATCAAATATGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: KLLLRLHLAIPSSSKQQTCSLHS*QHQICV Trigger: GACACATATTTGATGTTGTCATGAGTGAAGAGAGCA...AGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCTTAGTAGAAGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGCTTCTACTAAGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTAGAGACTTTCATCTCTaGTTAAGTCTCATGAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: KLLLRLHLAIPSSSKQQTRDFHL*LSLMKS Trigger: GCTCTTCATGAGACTTAAGCAGAGATGAAAGTCTCT...AGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCTTAGTAGAAGCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR-3UTR CCA 90 bp | ATAGAGGTAATAAGTATTATAGTACTGAGATATGTGTGGCTGTCTAGCTGCAATTCCCTCCAAGGATCATaGAATATCTGCAACTGGATA | + |
|
Preference number: 2 (lower is better) Translates to: IEVISIIVLRYVWLSSCNSLQGS*NICNWI Trigger: TATCCAGTTGCAGATATTCCATGATCCTTGGAGGGA...ATTGCAGCTAGACAGCCACACATATCTCAGTACTATAATACTTATTACCTCTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CCA 90 bp | AAAATAGATTTCCAGTTAAGACATGATTTCCCTCTAGTTGAGCTGGTCATCAGCAATGCAAAATTAGAGTaGAGTCAACCAGAAACTGGA | + |
|
Preference number: 2 (lower is better) Translates to: KIDFQLRHDFPLVELVISNAKLE*SQPETG Trigger: TCCAGTTTCTGGTTGACTCCACTCTAATTTTGCATT...GCTGATGACCAGCTCAACTAGAGGGAAATCATGTCTTAACTGGAAATCTATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CAA 90 bp | TGTTCTGGCTTTTTGACTTTCACTGTTCTCATTATATATATATGGTaGTGCCAATGTTACCTAAGTAATATGGGAGGAGTAGGTTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: CSGFLTFTVLIIYIW*CQCYLSNMGGVGFP Trigger: AGGGAAACCTACTCCTCCCATATTACTTAGGTAACATTGGCACAACCATATATATATAATGAGAACAGTGAAAGTCAAAAAGCCAGAACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR CAA 90 bp | ATAGTACTGAGATATGTGTGGCTGTCTAGCTGCAATAACTATATCTaGTATGCTTGTTGGGTATTTGCCTTGATATATGCTAGATGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: IVLRYVWLSSCNNYI*YACWVFALIYARCF Trigger: AAAGCATCTAGCATATATCAAGGCAAATACCCAACAAGCATACAAGATATAGTTATTGCAGCTAGACAGCCACACATATCTCAGTACTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR CAA 90 bp | TGCCCAACTGGTTCATGTCTCGCTTTGGCAATTACATTGAAGACTTaGAATGAATTTCAGAAGGGACTTAGAACTTGGATTTTTAACATT | + |
|
Preference number: 2 (lower is better) Translates to: CPTGSCLALAITLKT*NEFQKGLRTWIFNI Trigger: AATGTTAAAAATCCAAGTTCTAAGTCCCTTCTGAAATTCATTCAAAGTCTTCAATGTAATTGCCAAAGCGAGACATGAACCAGTTGGGCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR-3UTR TCA 90 bp | AAGCTTCTACTAAGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTCCAGCAATTCTTAGATaGTTTAAATCACCAGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: KLLLRLHLAIPSSSKQQTPAILR*FKSPER Trigger: CCTTTCTGGTGATTTAAATCATCTAAGAATTGCTGG...AGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCTTAGTAGAAGCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR TCA 90 bp | GAATCCTTGTTGAGGGATATAGAGAAGCTTCTACTAAGACTTCATTTAGCCATTTGTTTGGCTTACCAATaGAGTTCAAGGAACATAAGA | + |
|
Preference number: 2 (lower is better) Translates to: ESLLRDIEKLLLRLHLAICLAYQ*SSRNIR Trigger: TCTTATGTTCCTTGAACTTCATTGGTAAGCCAAACA...AATGGCTAAATGAAGTCTTAGTAGAAGCTTCTCTATATCCCTCAACAAGGATTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CCA 90 bp | AAGCTTCTACTAAGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTCTAAAACAGCTGTTCTaGCTTTTTGACTTTCACTGT | + |
|
Preference number: 2 (lower is better) Translates to: KLLLRLHLAIPSSSKQQTLKQLF*LFDFHC Trigger: ACAGTGAAAGTCAAAAAGCCAGAACAGCTGTTTTAG...AGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCTTAGTAGAAGCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR GCA 90 bp | ATAGAGGTAATAAGTATTATAGTACTGAGATATGTGTGGCTGTCTAGCTGCAATTTTGCTATTTCAGGCTaGAGGAAGAATACTCATGAA | + |
|
Preference number: 2 (lower is better) Translates to: IEVISIIVLRYVWLSSCNFAISG*RKNTHE Trigger: TTCATGAGTATTCTTCCTGCAGCCTGAAATAGCAAA...ATTGCAGCTAGACAGCCACACATATCTCAGTACTATAATACTTATTACCTCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTCTCTTCACTCATGACAACATCAAATATGTGTCTAGGTAATAGATCCAAAAAAACTGAGACACATTaGCTAGAGTTGTTCTTCTTA | + |
|
Preference number: 2 (lower is better) Translates to: VLSSLMTTSNMCLGNRSKKTETH*LELFFL Trigger: TAAGAAGAACAACTCTAGCCAATGTGTCTCAGTTTT...TTTGGATCTATTACCTAGACACATATTTGATGTTGTCATGAGTGAAGAGAGCAC 36% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR-3UTR CCA 90 bp | GAATCCTTGTTGAGGGATATAGAGAAGCTTCTACTAAGACTTCATTTAGCCATTATTTTATTTCCTTTGTaGTTATCGGGGAGAATGAGA | + |
|
Preference number: 2 (lower is better) Translates to: ESLLRDIEKLLLRLHLAIILFPL*LSGRMR Trigger: TCTCATTCTCCCCGATAACCACAAAGGAAATAAAAT...AATGGCTAAATGAAGTCTTAGTAGAAGCTTCTCTATATCCCTCAACAAGGATTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR GCA 72 bp | GGCCAACACAGTGGCAAGAGCCACAGTGAAAGCAATTaGAAAGGTGGTCTGCTGAAGGATGCAGGCGACTGT | + |
|
Preference number: 3 (lower is better) Translates to: GQHSGKSHSESN*KGGLLKDAGDC Trigger: ACAGTCGCCTGCATCCTTCAGCAGACCACCTTTGCAATTGCTTTCACTGTGGCTCTTGCCACTGTGTTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR TCA 72 bp | AGCAGCAGATGGCCTTGCCCTGCTGGGTTACTGTTCTaGATCCAGGCCTACAACTCTTACTGCACACAGACT | + |
|
Preference number: 3 (lower is better) Translates to: SSRWPCPAGLLF*IQAYNSYCTQT Trigger: AGTCTGTGTGCAGTAAGAGTTGTAGGCCTGGATTCAGAACAGTAACCCAGCAGGGCAAGGCCATCTGCTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR GCA 72 bp | GTCCAAATTGGAATCCTGCTCAAGGAGAGGTCCCAATaGCCGAAACTATTACTGAGGCTATGGAGCACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: VQIGILLKERSQ*PKLLLRLWSTH Trigger: GTGAGTGCTCCATAGCCTCAGTAATAGTTTCGGGCATTGGGACCTCTCCTTGAGCAGGATTCCAATTTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CCA 72 bp | CCTGAAAATGTAGACCTCTCAGATCCTTTTCTGCCATaGCTGCCTGGATGCTGTCATTCTCCTGTCTTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PENVDLSDPFLP*LPGCCHSPVLR Trigger: CCTCAAGACAGGAGAATGACAGCATCCAGGCAGCCATGGCAGAAAAGGATCTGAGAGGTCTACATTTTCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CCA 72 bp | GAGAGGTCCCAATGCCCGAAACTATTACTGAGGCTATaGAGCACTCACAAAAAGGGACCTATCATGACTGCC | + |
|
Preference number: 3 (lower is better) Translates to: ERSQCPKLLLRL*STHKKGPIMTA Trigger: GGCAGTCATGATAGGTCCCTTTTTGTGAGTGCTCCATAGCCTCAGTAATAGTTTCGGGCATTGGGACCTCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR TCA 72 bp | GGAAGGCGACAGCTGAACCCTTGTTGCACAAAAGGATaGTGTGTCCATGTTCAGTGTGAGCATCTTGGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: GRRQLNPCCTKG*CVHVQCEHLGQ Trigger: TTGACCAAGATGCTCACACTGAACATGGACACATCATCCTTTTGTGCAACAAGGGTTCAGCTGTCGCCTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | TATAACTCCCAAGGGCCAAGATACAGAGATATCCCAGGACGGAGTGGAAGGCGATCCAAACTAAATATTTaGCTATTTCAGGCTGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: YNSQGPRYRDIPGRSGRRSKLNI*LFQAAG Trigger: TCCTGCAGCCTGAAATAGCAAAATATTTAGTTTGGA...TCGCCTTCCACTCCGTCCTGGGATATCTCTGTATCTTGGCCCTTGGGAGTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGTCTGCTGAAGGATGCAGGCGACTGTGTTTGGCTTACCAATGAAGTTCAATCCATAATTTGGAATTaGCCCAACTGGTTCATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: GGLLKDAGDCVWLTNEVQSIIWN*PNWFMS Trigger: AGACATGAACCAGTTGGGCAAATTCCAAATTATGGA...TTGAACTTCATTGGTAAGCCAAACACAGTCGCCTGCATCCTTCAGCAGACCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR TCA 72 bp | TTTGACCACCAAACAGGCATCATATACCAGCTGATATaGGGTTCCAACACACATAGAGTAGAGGACTGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: FDHQTGIIYQLI*GSNTHRVEDCG Trigger: CCCACAGTCCTCTACTCTATGTGTGTTGGAACCTCATATCAGCTGGTATATGATGCCTGTTTGGTGGTCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR GCA 72 bp | AAGAGCCTAAGGAATAGAAGGTCCAAATTGGAATCCTaGTCAAGGAGAGGTCCCAATGCCCGAAACTATTAC | + |
|
Preference number: 3 (lower is better) Translates to: KSLRNRRSKLES*SRRGPNARNYY Trigger: GTAATAGTTTCGGGCATTGGGACCTCTCCTTGAGCAGGATTCCAATTTGGACCTTCTATTCCTTAGGCTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CCA 72 bp | AGACCTCATTGGCATCAGACATGGAGTTCCATAATTTaGAATTTGCCCAACTGGTTCATGTCTCGCTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: RPHWHQTWSSII*NLPNWFMSRFG Trigger: GCCAAAGCGAGACATGAACCAGTTGGGCAAATTCCAAATTATGGAACTCCATGTCTGATGCCAATGAGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CCA 72 bp | TGTAGACCTCTCAGATCCTTTTCTGCCATGGCTGCCTaGATGCTGTCATTCTCCTGTCTTGAGGATAATAAA | + |
|
Preference number: 3 (lower is better) Translates to: CRPLRSFSAMAA*MLSFSCLEDNK Trigger: TTTATTATCCTCAAGACAGGAGAATGACAGCATCCAGGCAGCCATGGCAGAAAAGGATCTGAGAGGTCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CCA 72 bp | CACTTGCAGCAGGAATACAGGACATCAAATGAGGAATaGGGTTGCCATCCAATAGTCACATTTCTGACCGAA | + |
|
Preference number: 3 (lower is better) Translates to: HLQQEYRTSNEE*GCHPIVTFLTE Trigger: TTCGGTCAGAAATGTGACTATTGGATGGCAACCCCATTCCTCATTTGATGTCCTGTATTCCTGCTGCAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CCA 72 bp | GCAGTGGTCCTTCTCTGTATTTGCATAATGACTCTCTaGACACTTCACACACTGGTCTACATCTGGTCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: AVVLLCICIMTL*TLHTLVYIWSE Trigger: TTCTGACCAGATGTAGACCAGTGTGTGAAGTGTCCAGAGAGTCATTATGCAAATACAGAGAAGGACCACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCATAGGCCAGAAAGCTCACAGATTTTGGAAAGCAGTGGTCCTTCTCTGTATTAGCCTAACCCTTCCATaGCTCTTTCTCTGCCTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: FIGQKAHRFWKAVVLLCISLTLP*LFLCLD Trigger: ATCAAGGCAGAGAAAGAGCAATGGAAGGGTTAGGCT...AATACAGAGAAGGACCACTGCTTTCCAAAATCTGTGAGCTTTCTGGCCTATGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCCATGTTCAGTGTGAGCATCTTGGTCAATGAATGGTGGAGAAGTTGTCATGTTGCTGAGTGTGATTaGAACTGGGGAATCCTGATT | + |
|
Preference number: 3 (lower is better) Translates to: VSMFSVSILVNEWWRSCHVAECD*NWGILI Trigger: AATCAGGATTCCCCAGTTCAAATCACACTCAGCAAC...ATGACAACTTCTCCACCATTCATTGACCAAGATGCTCACACTGAACATGGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR TCA 72 bp | CAATGGAGAACATACCCTGAGTTTGAGGCCAGCCTGTaGCAGTGCAAGTTCCAAGTAGAGAAAAGGTTAAAT | + |
|
Preference number: 3 (lower is better) Translates to: QWRTYPEFEASL*QCKFQVEKRLN Trigger: ATTTAACCTTTTCTCTACTTGGAACTTGCACTGTCACAGGCTGGCCTCAAACTCAGGGTATGTTCTCCATTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR TCA 72 bp | TCCTTTGTGGTTATCGGGGAGAATGAGACCAACCCATaGCCACCTAAAATGAACCATCAAAGAAACAATGGC | + |
|
Preference number: 3 (lower is better) Translates to: SFVVIGENETNP*PPKMNHQRNNG Trigger: GCCATTGTTTCTTTGATGGTTCATTTTAGGTGGTCATGGGTTGGTCTCATTCTCCCCGATAACCACAAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR GCA 72 bp | CTGGTCTACATCTGTCTCATTAGAAATCTCATTTTCTaGACAAGGAGTGCACTTGTAGCAGCAGATGGCCTT | + |
|
Preference number: 3 (lower is better) Translates to: LVYICLIRNLIF*TRSALVAADGL Trigger: AAGGCCATCTGCTGCTACAAGTGCACTCCTTGTGCAGAAAATGAGATTTCTAATGAGACAGATGTAGACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR CCA 72 bp | CTGGAGTGCTTTACAGGAGAAATAATGCAGGTCCTTTaGAGGAGCCTAGAAAATCTTGTACAGATTCTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: LECFTGEIMQVL*RSLENLVQILG Trigger: GCCTAGAATCTGTACAAGATTTTCTAGGCTCCTCCAAAGGACCTGCATTATTTCTCCTGTAAAGCACTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CCA 72 bp | GCAGTGGTCCTTCTCTGTATTTGCATAATGACTCTCTaGACACTTCACACACTGGTCTACATCTGTCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: AVVLLCICIMTL*TLHTLVYICLI Trigger: AATGAGACAGATGTAGACCAGTGTGTGAAGTGTCCAGAGAGTCATTATGCAAATACAGAGAAGGACCACTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR-3UTR CAA 90 bp | AATATGAAGGCAAGGAGTGCTGTGCTGGAAGCCAAGATAGAGAATACTTCCATGAGACTACTAGAACAATaGACACTGGTAATCTGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: NMKARSAVLEAKIENTSMRLLEQ*TLVIWS Trigger: GCTCCAGATTACCAGTGTCAATTGTTCTAGTAGTCT...CATGGAAGTATTCTCTATCTTGGCTTCCAGCACAGCACTCCTTGCCTTCATATT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR TCA 72 bp | TTGTTGCACAAAAGGATGATGTGTCCATGTTCAGTGTaGGCATCTTGGTCAATGAATGGTGGAGAAGTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LLHKRMMCPCSV*ASWSMNGGEVV Trigger: GACAACTTCTCCACCATTCATTGACCAAGATGCTCACACTGAACATGGACACATCATCCTTTTGTGCAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR TCA 72 bp | TTGAAGCAATGTCCCAATTTGGGCAGATGTTATCCATaGTGTTCCTGTGAGTGCAGCAGTGAAGTTTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LKQCPNLGRCYP*CSCECSSEVSL Trigger: AAGAGAAACTTCACTGCTGCACTCACAGGAACATCATGGATAACATCTGCCCAAATTGGGACATTGCTTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR TCA 72 bp | TCGGGGAGAATGAGACCAACCCATGACCACCTAAAATaGACCATCAAAGAAACAATGGCAAGTGTAAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SGRMRPTHDHLK*TIKETMASVRD Trigger: ATCTCTTACACTTGCCATTGTTTCTTTGATGGTTCATTTTAGGTGGTCATGGGTTGGTCTCATTCTCCCCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR GCA 72 bp | GGCACTATTTTGAAGTATGGTCTTGTTAAAGAAGTATaGCACTGTGGAAGTGGGCTTTTAGACCCTCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: GTILKYGLVKEV*HCGSGLLDPHP Trigger: AGGATGAGGGTCTAAAAGCCCACTTCCACAGTGGCATACTTCTTTAACAAGACCATACTTCAAAATAGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR GCA 72 bp | AATGTAACACTTGGGACCAAATATGAAGGCAAGGAGTaGTGTGCTGGAAGCCAAGATAGAGAATACTTCCAT | + |
|
Preference number: 3 (lower is better) Translates to: NVTLGTKYEGKE*CAGSQDREYFH Trigger: ATGGAAGTATTCTCTATCTTGGCTTCCAGCACAGCACTCCTTGCCTTCATATTTGGTCCCAAGTGTTACATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR CCA 72 bp | GAGGCACTATTTGTTGTTGTGGCCTTCTTGTGGGCATaGGCTTTAAGAACCTTGTCTTATGTGTTAAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: EALFVVVAFLWA*ALRTLSYVLRN Trigger: GTTTCTTAACACATAAGACAAGGTTCTTAAAGCCCATGCCCACAAGAAGGCCACAACAACAAATAGTGCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CCA 72 bp | CACAGTGTGGTCAAAACATCTGAAGAGAATAGTCTATaGGGCCATTTCTGTACCAACCACTACATTCCGTTT | + |
|
Preference number: 3 (lower is better) Translates to: HSVVKTSEENSL*GHFCTNHYIPF Trigger: AAACGGAATGTAGTGGTTGGTACAGAAATGGCCCCATAGACTATTCTCTTCAGATGTTTTGACCACACTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGATGCTGAATCACTGTTGGGTATTTGCCTaGATATATGCTAGATGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: EMIQEWRRQDLDSEMLNHCWVFA*IYARCF Trigger: AAAGCATCTAGCATATATCAAGGCAAATACCCAACA...GTGATTCAGCATCTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | GAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGATGCTGAATCACACAAATGAATCCTTGTaGAGGGATATAGAGAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: EMIQEWRRQDLDSEMLNHTNESL*RDIEKL Trigger: AAGCTTCTCTATATCCCTCAACAAGGATTCATTTGT...GTGATTCAGCATCTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | GAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGATGCTGAATCACGAAAATCATCTGGGATaGCTTTCTGAGAGTAAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: EMIQEWRRQDLDSEMLNHENHLG*LSESKR Trigger: TCTTTTACTCTCAGAAAGCAATCCCAGATGATTTTC...GTGATTCAGCATCTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | AGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTCAAATAGCCTGCACAGCTGAACCCTTGTaGCACAAAAGGATGATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RLHLAIPSSSKQQTQIACTAEPL*HKRMMC Trigger: ACACATCATCCTTTTGTGCAACAAGGGTTCAGCTGT...GCAGGCTATTTGAGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR GCA 72 bp | GGAAGTCCCAAGAAGCTGAACAGAGACTTTCATCTCTaGTTAAGTCTCATGAAGAGCATGAAGAACATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GSPKKLNRDFHL*LSLMKSMKNIF Trigger: GAAAATGTTCTTCATGCTCTTCATGAGACTTAAGCAGAGATGAAAGTCTCTGTTCAGCTTCTTGGGACTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CCA 72 bp | CAGACATGGAGTTCCATAATTTGGAATTTGCCCAACTaGTTCATGTCTCGCTTTGGCAATTACATTGAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QTWSSIIWNLPN*FMSRFGNYIED Trigger: GTCTTCAATGTAATTGCCAAAGCGAGACATGAACCAGTTGGGCAAATTCCAAATTATGGAACTCCATGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CCA 72 bp | GGAGAAGTTGTCATCCATATTCCACAAATAAGAAGCTaGATCAGGGTGCAGATAGGAATGATGTATCTTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GEVVIHIPQIRS*IRVQIGMMYLG Trigger: TCCAAGATACATCATTCCTATCTGCACCCTGATCCAGCTTCTTATTTGTGGAATATGGATGACAACTTCTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGATGCCAATAACAAAGGCAGTGAATGCAGATAAGCACAAAGCTATGCTGCCTAGCTGTTCTGGCTTTTaGACTTTCACTGTTCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: KMPITKAVNADKHKAMLPSCSGF*TFTVLI Trigger: AATGAGAACAGTGAAAGTCAAAAAGCCAGAACAGCT...AGGCAGCATAGCTTTGTGCTTATCTGCATTCACTGCCTTTGTTATTGGCATCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | TGGTGGAGAAGTTGTCATCCATATTCCACAAATAAGAAGCTGGATCAGGGTGCATGGATAGGACAAGTGTaGAAGAGAAAAGTAATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: WWRSCHPYSTNKKLDQGAWIGQV*KRKVIQ Trigger: TTGGATTACTTTTCTCTTCAACACTTGTCCTATCCA...TGCACCCTGATCCAGCTTCTTATTTGTGGAATATGGATGACAACTTCTCCACCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | AATATGAAGGCAAGGAGTGCTGTGCTGGAAGCCAAGATAGAGAATACTTCCATGTGGATAGGACAAGTGTaGAAGAGAAAAGTAATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: NMKARSAVLEAKIENTSMWIGQV*KRKVIQ Trigger: TTGGATTACTTTTCTCTTCAACACTTGTCCTATCCA...CATGGAAGTATTCTCTATCTTGGCTTCCAGCACAGCACTCCTTGCCTTCATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | AATATGAAGGCAAGGAGTGCTGTGCTGGAAGCCAAGATAGAGAATACTTCCATGACAAATGAATCCTTGTaGAGGGATATAGAGAAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: NMKARSAVLEAKIENTSMTNESL*RDIEKL Trigger: AAGCTTCTCTATATCCCTCAACAAGGATTCATTTGT...CATGGAAGTATTCTCTATCTTGGCTTCCAGCACAGCACTCCTTGCCTTCATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTTCTACTAAGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTTGGGATGTGAAAATGTaGGAGTGTGGATGGGGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: KLLLRLHLAIPSSSKQQTWDVKM*ECGWGN Trigger: ATTCCCCCATCCACACTCCAACATTTTCACATCCCA...AGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCTTAGTAGAAGCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCCATGTTCAGTGTGAGCATCTTGGTCAATGAATGGTGGAGAAGTTGTCATCATGTTCACTCAAGATaGTATCATAAGGTCCAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: VSMFSVSILVNEWWRSCHHVHSR*YHKVQK Trigger: CTTTTGGACCTTATGATACAATCTTGAGTGAACATG...ATGACAACTTCTCCACCATTCATTGACCAAGATGCTCACACTGAACATGGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTCCATGTTCAGTGTGAGCATCTTGGTCAATGAATGGTGGAGAAGTTGTCATAGAATTTTATTTCCTTaGTGGTTATCGGGGAGAATG | + |
|
Preference number: 3 (lower is better) Translates to: VSMFSVSILVNEWWRSCHRILFP*WLSGRM Trigger: CATTCTCCCCGATAACCACAAAGGAAATAAAATTCT...ATGACAACTTCTCCACCATTCATTGACCAAGATGCTCACACTGAACATGGACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGATATACACATTTGAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAAGCTGTTCTGGCTTTTaGACTTTCACTGTTCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: RIYTFEMIQEWRRQDLDSSCSGF*TFTVLI Trigger: AATGAGAACAGTGAAAGTCAAAAAGCCAGAACAGCT...TGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTCAAATGTGTATATCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGACACAGAAGAACACCAACATGCTGAATGACAGAAATTTGGATTCATTGCAAAGAAGCATTGGTTaGACACTTGTCCAAAACATG | + |
|
Preference number: 3 (lower is better) Translates to: TQTQKNTNMLNDRNLDSLQRSIG*TLVQNM Trigger: CATGTTTTGGACAAGTGTCAAACCAATGCTTCTTTG...CAATGAATCCAAATTTCTGTCATTCAGCATGTTGGTGTTCTTCTGTGTCTGGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR TCA 72 bp | AGAATCACCTACACGGTAGTAGTCAACATGCACAAATaGATCCTTGTTGAGGGATATAGAGAAGCTTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: RITYTVVVNMHK*ILVEGYREAST Trigger: AGTAGAAGCTTCTCTATATCCCTCAACAAGGATTCATTTGTGCATGTTGACTACTACCGTGTAGGTGATTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR TCA 72 bp | GCCCAGAAGAAAGAAGTTTATTGCAGTCAACAAAGATaGAAAAGTAGTGGACATCTGAAGACCTCATTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: AQKKEVYCSQQR*KSSGHLKTSLA Trigger: TGCCAATGAGGTCTTCAGATGTCCACTACTTTTTCATCTTTGTTGACTGCAATAAACTTCTTTCTTCTGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR TCA 72 bp | CAAGAGATATGTTGGGTAAAATATAGGGGTTCCCATTaGTCTCCTCAATGGCAAATAGCAGAGCCAGAATAT | + |
|
Preference number: 3 (lower is better) Translates to: QEICWVKYRGSH*SPQWQIAEPEY Trigger: ATATTCTGGCTCTGCTATTTGCCATTGAGGAGATCAATGGGAACCCCTATATTTTACCCAACATATCTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR GCA 72 bp | TATGCTTGTTGGGTATTTGCCTTGATATATGCTAGATaGTTTGCCCTTAAGCCCTTTTGTTCAGCATTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: YACWVFALIYAR*FALKPFCSAFC Trigger: GCAAAATGCTGAACAAAAGGGCTTAAGGGCAAAGCATCTAGCATATATCAAGGCAAATACCCAACAAGCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR CCA 72 bp | AGTAAACAGCAAACTCAAATAGCCTGCAATGAGGCCTaGATAGGACAAGTGTTGAAGAGAAAAGTAATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SKQQTQIACNEA*IGQVLKRKVIQ Trigger: TTGGATTACTTTTCTCTTCAACACTTGTCCTATCCAGGCCTCATTGCAGGCTATTTGAGTTTGCTGTTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR CCA 72 bp | TCCATGTTCAGTGTGAGCATCTTGGTCAATGAATGGTaGAGAAGTTGTCATCCATATTCCACAAATAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SMFSVSILVNEW*RSCHPYSTNKK Trigger: CTTCTTATTTGTGGAATATGGATGACAACTTCTCCACCATTCATTGACCAAGATGCTCACACTGAACATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGATATACACATTTGAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAATCACTAGAGCAATaGTGGTTTTCAAACATTGGA | + |
|
Preference number: 3 (lower is better) Translates to: RIYTFEMIQEWRRQDLDSESLEQ*WFSNIG Trigger: TCCAATGTTTGAAAACCACAATTGCTCTAGTGATTC...TGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTCAAATGTGTATATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | AGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTCAAATAGCCTGCGAATCACTAGAGCAATaGTGGTTTTCAAACATTGGA | + |
|
Preference number: 3 (lower is better) Translates to: RLHLAIPSSSKQQTQIACESLEQ*WFSNIG Trigger: TCCAATGTTTGAAAACCACAATTGCTCTAGTGATTC...GCAGGCTATTTGAGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCCAGACACAGAAGAACACCAACATGCTGAATGACAGAAATTTGGATTCATTGTGTTGGGTATTTGCCTaGATATATGCTAGATGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: TQTQKNTNMLNDRNLDSLCWVFA*IYARCF Trigger: AAAGCATCTAGCATATATCAAGGCAAATACCCAACA...CAATGAATCCAAATTTCTGTCATTCAGCATGTTGGTGTTCTTCTGTGTCTGGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | AGGATATACACATTTGAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCATGGATAGGACAAGTGTaGAAGAGAAAAGTAATCCAA | + |
|
Preference number: 3 (lower is better) Translates to: RIYTFEMIQEWRRQDLDSWIGQV*KRKVIQ Trigger: TTGGATTACTTTTCTCTTCAACACTTGTCCTATCCA...TGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTCAAATGTGTATATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR GCA 72 bp | TCCCTTCCATCAGTTTATACTCACAGCTCCTCCTTGTaGTCTATACCTACCTTTTACATTTTAATAGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: SLPSVYTHSSSL*SIPTFYILIVT Trigger: AGTGACTATTAAAATGTAAAAGGTAGGTATAGAGCACAAGGAGGAGCTGTGAGTATAAACTGATGGAAGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CCA 72 bp | CTGTCTAGCTGCAATAACTATATCTTGTATGCTTGTTaGGTATTTGCCTTGATATATGCTAGATGCTTTGCC | + |
|
Preference number: 3 (lower is better) Translates to: LSSCNNYILYAC*VFALIYARCFA Trigger: GGCAAAGCATCTAGCATATATCAAGGCAAATACCCAACAAGCATACAAGATATAGTTATTGCAGCTAGACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR TCA 72 bp | AGTAAAAACCTAAGACATAAGTTAGAACCCATATTGTaGCATTTCTGTGGTAGACCTGACCACGTTTTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SKNLRHKLEPIL*HFCGRPDHVFG Trigger: ACCAAAAACGTGGTCAGGTCTACCACAGAAATGTCACAATATGGGTTCTAACTTATGTCTTAGGTTTTTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | AAGCTTCTACTAAGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTTCCAAACTAAATATTTaGCTATTTCAGGCTGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KLLLRLHLAIPSSSKQQTSKLNI*LFQAAG Trigger: TCCTGCAGCCTGAAATAGCAAAATATTTAGTTTGGA...AGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCTTAGTAGAAGCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTTGGTAAATTCCAAAGGTTAAGAATGTCATATCCTGAATCTTTTGTCTGTGAATCACTAGAGCAATaGTGGTTTTCAAACATTGGA | + |
|
Preference number: 3 (lower is better) Translates to: PFGKFQRLRMSYPESFVCESLEQ*WFSNIG Trigger: TCCAATGTTTGAAAACCACAATTGCTCTAGTGATTC...ACAGACAAAAGATTCAGGATATGACATTCTTAACCTTTGGAATTTACCAAAGGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAGAGGTAATAAGTATTATAGTACTGAGATATGTGTGGCTGTCTAGCTGCAATTGTTGGGTATTTGCCTaGATATATGCTAGATGCTTT | + |
|
Preference number: 3 (lower is better) Translates to: IEVISIIVLRYVWLSSCNCWVFA*IYARCF Trigger: AAAGCATCTAGCATATATCAAGGCAAATACCCAACA...ATTGCAGCTAGACAGCCACACATATCTCAGTACTATAATACTTATTACCTCTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR GCA 72 bp | TTGACTTTCACTGTTCTCATTATATATATATGGTTGTaGCAATGTTACCTAAGTAATATGGGAGGAGTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: LTFTVLIIYIWL*QCYLSNMGGVG Trigger: ACCTACTCCTCCCATATTACTTAGGTAACATTGGCACAACCATATATATATAATGAGAACAGTGAAAGTCAA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| CDS-3UTR GCA 90 bp | GAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGATGCTGAATCACAGCACAAAGCTATGCTaGCTAGTGCCATCCCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EMIQEWRRQDLDSEMLNHSTKLC*LVPSPG Trigger: CCCTGGGGATGGCACTAGGCAGCATAGCTTTGTGCT...GTGATTCAGCATCTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172190.4 |
||
| 3UTR CAA 72 bp | GAAGTGGAGAAGAGCCTAAGGAATAGAAGGTCCAAATaGGAATCCTGCTCAAGGAGAGGTCCCAATGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: EVEKSLRNRRSK*ESCSRRGPNAR Trigger: TCGGGCATTGGGACCTCTCCTTGAGCAGGATTCCAATTTGGACCTTCTATTCCTTAGGCTCTTCTCCACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| CDS-3UTR CCA 90 bp | ATGGGAGGAGTAGGTTTCCCTCCAAGGATCATGGAATATCTGCAACTGGATAGAACTTGTAGCAGCAGATaGCCTTGCCCTGCTGGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: MGGVGFPPRIMEYLQLDRTCSSR*PCPAGL Trigger: TAACCCAGCAGGGCAAGGCCATCTGCTGCTACAAGT...TCTATCCAGTTGCAGATATTCCATGATCCTTGGAGGGAAACCTACTCCTCCCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172190.4 |
||
| CDS-3UTR TCA 90 bp | AGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTCAAATAGCCTGCGCAAAGGTGGTCTGCTaGAGGATGCAGGCGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RLHLAIPSSSKQQTQIACAKVVC*RMQATV Trigger: CACAGTCGCCTGCATCCTTCAGCAGACCACCTTTGC...GCAGGCTATTTGAGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172190.4 |
||
| 3UTR CAA 72 bp | AAACTGACCTTAAAGGCAAGGACCACAGTAATAGCTTaGGCCAACACAGTGGCAAGAGCCACAGTGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: KLTLKARTTVIA*ANTVARATVKA Trigger: TGCTTTCACTGTGGCTCTTGCCACTGTGTTGGCCAAAGCTATTACTGTGGTCCTTGCCTTTAAGGTCAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR CAA 72 bp | AGACTTAGCAACATGAGAAGAGACTATGAGAGGTTATaGGTGAAGCCTGGCTTCAGTGCAAGATCCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLSNMRRDYERL*VKPGFSARSQC Trigger: ACACTGGGATCTTGCACTGAAGCCAGGCTTCACCAATAACCTCTCATAGTCTCTTCTCATGTTGCTAAGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CAA 72 bp | CCAGGGGGTCTTCATAGGCCAGAAAGCTCACAGATTTaGGAAAGCAGTGGTCCTTCTCTGTATTTGCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGGLHRPESSQI*ESSGPSLYLHN Trigger: ATTATGCAAATACAGAGAAGGACCACTGCTTTCCAAAATCTGTGAGCTTTCTGGCCTATGAAGACCCCCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| CDS-3UTR TCA 90 bp | CTGCTGAAGGATGCAGGCGACTGTGTTTGGCTTACCAATGAAGTTCAAGGAACATGCTCTCTTCACTCATaGCAACATCAAATATGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LLKDAGDCVWLTNEVQGTCSLHS*QHQICV Trigger: GACACATATTTGATGTTGTCATGAGTGAAGAGAGCA...TGTTCCTTGAACTTCATTGGTAAGCCAAACACAGTCGCCTGCATCCTTCAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| CDS-3UTR TCA 90 bp | GAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGATGCTGAATCACAGACTGAGGGATCTCTaGAAATATTTCTGGCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: EMIQEWRRQDLDSEMLNHRLRDL*KYFWPL Trigger: CAATGGCCAGAAATATTTTCAGAGATCCCTCAGTCT...GTGATTCAGCATCTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172190.4 |
||
| CDS-3UTR GCA 90 bp | GAATCCTTGTTGAGGGATATAGAGAAGCTTCTACTAAGACTTCATTTAGCCATTAGCAGCAGATGGCCTTaGCCTGCTGGGTTACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ESLLRDIEKLLLRLHLAISSRWP*PAGLLF Trigger: GAACAGTAACCCAGCAGGGCAAGGCCATCTGCTGCT...AATGGCTAAATGAAGTCTTAGTAGAAGCTTCTCTATATCCCTCAACAAGGATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172190.4 |
||
| 3UTR CAA 72 bp | TGTGATCTAGATCTTGAGACTGGGAGACACAGGCTTTaGACCGGGATCATGGAAAACAGTGGCCATAAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CDLDLETGRHRL*TGIMENSGHKN Trigger: ATTTTTATGGCCACTGTTTTCCATGATCCCGGTCAAAAGCCTGTGTCTCCCAGTCTCAAGATCTAGATCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| CDS-3UTR CCA 90 bp | GAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGATGCTGAATCACATCTTGGTCAATGAATaGTGGAGAAGTTGTCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: EMIQEWRRQDLDSEMLNHILVNE*WRSCHP Trigger: TGGATGACAACTTCTCCACCATTCATTGACCAAGAT...GTGATTCAGCATCTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172190.4 |
||
| 3UTR CAA 72 bp | GTTGTGGCCTTCTTGTGGGCATGGGCTTTAAGAACCTaGTCTTATGTGTTAAGAAACCAGTCTCTTACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VVAFLWAWALRT*SYVLRNQSLTS Trigger: ACTAGTAAGAGACTGGTTTCTTAACACATAAGACAAGGTTCTTAAAGCCCATGCCCACAAGAAGGCCACAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| 3UTR CAA 72 bp | ACTGGAGTGCTTTACAGGAGAAATAATGCAGGTCCTTaGGAGGAGCCTAGAAAATCTTGTACAGATTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TGVLYRRNNAGP*EEPRKSCTDSR Trigger: CCTAGAATCTGTACAAGATTTTCTAGGCTCCTCCAAAGGACCTGCATTATTTCTCCTGTAAAGCACTCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| CDS-3UTR TCA 90 bp | GAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGATGCTGAATCACTTGATATGGTTTAGCTaGATGTGGCCTTTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EMIQEWRRQDLDSEMLNHLIWFS*MWPFLF Trigger: GAAAAGAAAAGGCCACATTCAGCTAAACCATATCAA...GTGATTCAGCATCTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| CDS-3UTR TCA 90 bp | GAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGATGCTGAATCACCATGACCACCTAAAATaGACCATCAAAGAAACAATG | + |
|
Preference number: 4 (lower is better) Translates to: EMIQEWRRQDLDSEMLNHHDHLK*TIKETM Trigger: CATTGTTTCTTTGATGGTTCATTTTAGGTGGTCATG...GTGATTCAGCATCTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
||
| CDS-3UTR TCA 90 bp | AAGATGCCAATAACAAAGGCAGTGAATGCAGATAAGCACAAAGCTATGCTGCCTAATGAGACCAACCCATaGCCACCTAAAATGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KMPITKAVNADKHKAMLPNETNP*PPKMNH Trigger: ATGGTTCATTTTAGGTGGTCATGGGTTGGTCTCATT...AGGCAGCATAGCTTTGTGCTTATCTGCATTCACTGCCTTTGTTATTGGCATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| CDS-3UTR TCA 90 bp | AATATGGGAGGAGTAGGTTTCCCTCCAAGGATCATGGAATATCTGCAACTGGATTGCTCTCTTCACTCATaGCAACATCAAATATGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: NMGGVGFPPRIMEYLQLDCSLHS*QHQICV Trigger: GACACATATTTGATGTTGTCATGAGTGAAGAGAGCA...ATCCAGTTGCAGATATTCCATGATCCTTGGAGGGAAACCTACTCCTCCCATATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
||
| 3UTR CAA 72 bp | GGAGTTGTCAATATTCTCACTAGCCTAACCCTTCCATaGCTCTTTCTCTGCCTTGATAGACTGAAATCTATC | + |
|
Preference number: 4 (lower is better) Translates to: GVVNILTSLTLP*LFLCLDRLKSI Trigger: GATAGATTTCAGTCTATCAAGGCAGAGAAAGAGCAATGGAAGGGTTAGGCTAGTGAGAATATTGACAACTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| 3UTR CAA 72 bp | CAACCATATGGGACCCAAGGAGTAGAAAGACCTAGTTaGAAAATACTTGGTATAGGGAGAGGCACTATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QPYGTQGVERPS*KILGIGRGTIC Trigger: ACAAATAGTGCCTCTCCCTATACCAAGTATTTTCAAACTAGGTCTTTCTACTCCTTGGGTCCCATATGGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| CDS-3UTR TCA 90 bp | AATATGGGAGGAGTAGGTTTCCCTCCAAGGATCATGGAATATCTGCAACTGGATTTGATATGGTTTAGCTaGATGTGGCCTTTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NMGGVGFPPRIMEYLQLDLIWFS*MWPFLF Trigger: GAAAAGAAAAGGCCACATTCAGCTAAACCATATCAA...ATCCAGTTGCAGATATTCCATGATCCTTGGAGGGAAACCTACTCCTCCCATATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
||
| CDS-3UTR TCA 90 bp | AGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTCAAATAGCCTGCTATAGGGGTTCCCATTaGTCTCCTCAATGGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: RLHLAIPSSSKQQTQIACYRGSH*SPQWQI Trigger: TATTTGCCATTGAGGAGATCAATGGGAACCCCTATA...GCAGGCTATTTGAGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
||
| CDS-3UTR TCA 90 bp | CTGGAGTGCTTTACAGGAGAAATAATGCAGGTCCTTTGGAGGAGCCTAGAAAATCATGACCACCTAAAATaGACCATCAAAGAAACAATG | + |
|
Preference number: 4 (lower is better) Translates to: LECFTGEIMQVLWRSLENHDHLK*TIKETM Trigger: CATTGTTTCTTTGATGGTTCATTTTAGGTGGTCATG...ATTTTCTAGGCTCCTCCAAAGGACCTGCATTATTTCTCCTGTAAAGCACTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| CDS-3UTR TCA 90 bp | AAGATGCCAATAACAAAGGCAGTGAATGCAGATAAGCACAAAGCTATGCTGCCTTATGTTCAATGTTCATaGCCCAGACAATCCATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KMPITKAVNADKHKAMLPYVQCS*PRQSMS Trigger: TGACATGGATTGTCTGGGTCATGAACATTGAACATA...AGGCAGCATAGCTTTGTGCTTATCTGCATTCACTGCCTTTGTTATTGGCATCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| CDS-3UTR TCA 90 bp | AATATGGGAGGAGTAGGTTTCCCTCCAAGGATCATGGAATATCTGCAACTGGATAGAACACCAACATGCTaGATGACAGAAATTTGGATT | + |
|
Preference number: 4 (lower is better) Translates to: NMGGVGFPPRIMEYLQLDRTPTC*MTEIWI Trigger: AATCCAAATTTCTGTCATTCAGCATGTTGGTGTTCT...ATCCAGTTGCAGATATTCCATGATCCTTGGAGGGAAACCTACTCCTCCCATATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172190.4 |
||
| CDS-3UTR GCA 90 bp | AGGATATACACATTTGAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAACCCTGGGGAGCATTTaGAGAAAAGGATCCTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RIYTFEMIQEWRRQDLDSTLGSI*RKGSYF Trigger: AAAATAGGATCCTTTTCTGCAAATGCTCCCCAGGGT...TGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTCAAATGTGTATATCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
||
| CDS-3UTR GCA 90 bp | AAGCTTCTACTAAGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTGCCTACAACTCTTACTaGACACAGACTGAGGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: KLLLRLHLAIPSSSKQQTAYNSY*TQTEGS Trigger: AGATCCCTCAGTCTGTGTGCAGTAAGAGTTGTAGGC...AGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCTTAGTAGAAGCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172190.4 |
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| CDS-3UTR CCA 90 bp | GAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGATGCTGAATCACATTTTATTTCCTTTGTaGTTATCGGGGAGAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EMIQEWRRQDLDSEMLNHILFPL*LSGRMR Trigger: TCTCATTCTCCCCGATAACCACAAAGGAAATAAAAT...GTGATTCAGCATCTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
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| CDS-3UTR CCA 90 bp | GAATCCTTGTTGAGGGATATAGAGAAGCTTCTACTAAGACTTCATTTAGCCATTAGCGTTAAGCTGCCATaGAAAGAACACCATTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESLLRDIEKLLLRLHLAISVKLP*KEHHSL Trigger: GAGGGAATGGTGTTCTTTCCATGGCAGCTTAACGCT...AATGGCTAAATGAAGTCTTAGTAGAAGCTTCTCTATATCCCTCAACAAGGATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
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| CDS-3UTR TCA 90 bp | ATATACACATTTGAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGTATGTTCAATGTTCATaGCCCAGACAATCCATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IYTFEMIQEWRRQDLDSEYVQCS*PRQSMS Trigger: TGACATGGATTGTCTGGGTCATGAACATTGAACATA...CTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTCAAATGTGTATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
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| CDS-3UTR GCA 90 bp | AAAATAGATTTCCAGTTAAGACATGATTTCCCTCTAGTTGAGCTGGTCATCAGCACCCTGGGGAGCATTTaGAGAAAAGGATCCTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: KIDFQLRHDFPLVELVISTLGSI*RKGSYF Trigger: AAAATAGGATCCTTTTCTGCAAATGCTCCCCAGGGT...GCTGATGACCAGCTCAACTAGAGGGAAATCATGTCTTAACTGGAAATCTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
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| CDS-3UTR CCA 90 bp | GTGTCCATGTTCAGTGTGAGCATCTTGGTCAATGAATGGTGGAGAAGTTGTCATATTTTATTTCCTTTGTaGTTATCGGGGAGAATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSMFSVSILVNEWWRSCHILFPL*LSGRMR Trigger: TCTCATTCTCCCCGATAACCACAAAGGAAATAAAAT...ATGACAACTTCTCCACCATTCATTGACCAAGATGCTCACACTGAACATGGACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| CDS-3UTR CCA 90 bp | ATAGAGGTAATAAGTATTATAGTACTGAGATATGTGTGGCTGTCTAGCTGCAATAGCGTTAAGCTGCCATaGAAAGAACACCATTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: IEVISIIVLRYVWLSSCNSVKLP*KEHHSL Trigger: GAGGGAATGGTGTTCTTTCCATGGCAGCTTAACGCT...ATTGCAGCTAGACAGCCACACATATCTCAGTACTATAATACTTATTACCTCTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
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| CDS-3UTR CCA 90 bp | AAAATAGATTTCCAGTTAAGACATGATTTCCCTCTAGTTGAGCTGGTCATCAGCAAAGCTCACAGATTTTaGAAAGCAGTGGTCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KIDFQLRHDFPLVELVISKAHRF*KAVVLL Trigger: GAGAAGGACCACTGCTTTCCAAAATCTGTGAGCTTT...GCTGATGACCAGCTCAACTAGAGGGAAATCATGTCTTAACTGGAAATCTATTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172190.4 |
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| 3UTR CAA 72 bp | TGCCCAACTGGTTCATGTCTCGCTTTGGCAATTACATaGAAGACTTTGAATGAATTTCAGAAGGGACTTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CPTGSCLALAIT*KTLNEFQKGLR Trigger: TCTAAGTCCCTTCTGAAATTCATTCAAAGTCTTCAATGTAATTGCCAAAGCGAGACATGAACCAGTTGGGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
||
| CDS-3UTR TCA 90 bp | GAAGCTGAACAGAGACTTTCATCTCTGCTTAAGTCTCATGAAGAGCATGAAGAATTGATATGGTTTAGCTaGATGTGGCCTTTTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: EAEQRLSSLLKSHEEHEELIWFS*MWPFLF Trigger: GAAAAGAAAAGGCCACATTCAGCTAAACCATATCAA...TTCTTCATGCTCTTCATGAGACTTAAGCAGAGATGAAAGTCTCTGTTCAGCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| CDS-3UTR TCA 90 bp | GAATCCTTGTTGAGGGATATAGAGAAGCTTCTACTAAGACTTCATTTAGCCATTTATAGGGGTTCCCATTaGTCTCCTCAATGGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: ESLLRDIEKLLLRLHLAIYRGSH*SPQWQI Trigger: TATTTGCCATTGAGGAGATCAATGGGAACCCCTATA...AATGGCTAAATGAAGTCTTAGTAGAAGCTTCTCTATATCCCTCAACAAGGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
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| CDS-3UTR TCA 90 bp | AAGCTTCTACTAAGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTAATGAGACCAACCCATaGCCACCTAAAATGAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLLLRLHLAIPSSSKQQTNETNP*PPKMNH Trigger: ATGGTTCATTTTAGGTGGTCATGGGTTGGTCTCATT...AGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCTTAGTAGAAGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
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| CDS-3UTR TCA 90 bp | AGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTCAAATAGCCTGCTGTTTGGCTTACCAATaGAGTTCAAGGAACATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RLHLAIPSSSKQQTQIACCLAYQ*SSRNIR Trigger: TCTTATGTTCCTTGAACTTCATTGGTAAGCCAAACA...GCAGGCTATTTGAGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172190.4 |
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| CDS-3UTR TCA 90 bp | ATATACACATTTGAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGCACCAACATGCTGAATaGCAGAAATTTGGATTCATT | + |
|
Preference number: 4 (lower is better) Translates to: IYTFEMIQEWRRQDLDSEHQHAE*QKFGFI Trigger: AATGAATCCAAATTTCTGTCATTCAGCATGTTGGTG...CTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTCAAATGTGTATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172190.4 |
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| CDS-3UTR GCA 90 bp | ATAGAGGTAATAAGTATTATAGTACTGAGATATGTGTGGCTGTCTAGCTGCAATCACAGTGAAAGCAATTaGAAAGGTGGTCTGCTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IEVISIIVLRYVWLSSCNHSESN*KGGLLK Trigger: CTTCAGCAGACCACCTTTGCAATTGCTTTCACTGTG...ATTGCAGCTAGACAGCCACACATATCTCAGTACTATAATACTTATTACCTCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172190.4 |
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| CDS-3UTR CCA 90 bp | AGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTCAAATAGCCTGCAATATGCAGTCCATGTaGCTGGGATCATTTTTACAA | + |
|
Preference number: 4 (lower is better) Translates to: RLHLAIPSSSKQQTQIACNMQSM*LGSFLQ Trigger: TTGTAAAAATGATCCCAGCCACATGGACTGCATATT...GCAGGCTATTTGAGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
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| CDS-3UTR CCA 90 bp | ATATACACATTTGAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGTTGGTCAATGAATGGTaGAGAAGTTGTCATCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: IYTFEMIQEWRRQDLDSELVNEW*RSCHPY Trigger: ATATGGATGACAACTTCTCCACCATTCATTGACCAA...CTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTCAAATGTGTATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172190.4 |
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| 3UTR CAA 72 bp | CTTTCCCTTCCATCAGTTTATACTCACAGCTCCTCCTaGTGCTCTATACCTACCTTTTACATTTTAATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLPSVYTHSSS*CSIPTFYILIV Trigger: GACTATTAAAATGTAAAAGGTAGGTATAGAGCACAAGGAGGAGCTGTGAGTATAAACTGATGGAAGGGAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| CDS-3UTR TCA 90 bp | ATAGAGGTAATAAGTATTATAGTACTGAGATATGTGTGGCTGTCTAGCTGCAATTGTCCATGTTCAGTGTaGGCATCTTGGTCAATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: IEVISIIVLRYVWLSSCNCPCSV*ASWSMN Trigger: ATTCATTGACCAAGATGCTCACACTGAACATGGACA...ATTGCAGCTAGACAGCCACACATATCTCAGTACTATAATACTTATTACCTCTAT 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172190.4 |
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| CDS-3UTR CCA 90 bp | AAAATAGATTTCCAGTTAAGACATGATTTCCCTCTAGTTGAGCTGGTCATCAGCATCCAAGAGATATGTTaGGTAAAATATAGGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KIDFQLRHDFPLVELVISIQEIC*VKYRGS Trigger: GGAACCCCTATATTTTACCCAACATATCTCTTGGAT...GCTGATGACCAGCTCAACTAGAGGGAAATCATGTCTTAACTGGAAATCTATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
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| 3UTR CAA 72 bp | GGACTTAGACTCAGAGATGCTGAATCACTAGAGCAATaGTGGTTTTCAAACATTGGAAATAAATGGCTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GLRLRDAESLEQ*WFSNIGNKWLS Trigger: TGAAAGCCATTTATTTCCAATGTTTGAAAACCACAATTGCTCTAGTGATTCAGCATCTCTGAGTCTAAGTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| 3UTR CAA 72 bp | AGATATGTGTGGCTGTCTAGCTGCAATAACTATATCTaGTATGCTTGTTGGGTATTTGCCTTGATATATGCT | + |
|
Preference number: 4 (lower is better) Translates to: RYVWLSSCNNYI*YACWVFALIYA Trigger: AGCATATATCAAGGCAAATACCCAACAAGCATACAAGATATAGTTATTGCAGCTAGACAGCCACACATATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| CDS-3UTR CCA 90 bp | ATAGAGGTAATAAGTATTATAGTACTGAGATATGTGTGGCTGTCTAGCTGCAATATCCAAGAGATATGTTaGGTAAAATATAGGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IEVISIIVLRYVWLSSCNIQEIC*VKYRGS Trigger: GGAACCCCTATATTTTACCCAACATATCTCTTGGAT...ATTGCAGCTAGACAGCCACACATATCTCAGTACTATAATACTTATTACCTCTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
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| 3UTR CAA 72 bp | AATAACTATATCTTGTATGCTTGTTGGGTATTTGCCTaGATATATGCTAGATGCTTTGCCCTTAAGCCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NNYILYACWVFA*IYARCFALKPF Trigger: AAAGGGCTTAAGGGCAAAGCATCTAGCATATATCAAGGCAAATACCCAACAAGCATACAAGATATAGTTATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172190.4 ENSMUST00000231457.2 ENSMUST00000231815.3 |
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| 3UTR CAA 72 bp | ATAAGGTCCAAAAGTAATCTGTGGAAATTTAAAGAGTaGAAGCAATGTCCCAATTTGGGCAGATGTTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: IRSKSNLWKFKE*KQCPNLGRCYP Trigger: TGGATAACATCTGCCCAAATTGGGACATTGCTTCAACTCTTTAAATTTCCACAGATTACTTTTGGACCTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231457.2 |
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| CDS-3UTR CAA 90 bp | GAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGATGCTGAATCACGAAAGCTCACAGATTTaGGAAAGCAGTGGTCCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: EMIQEWRRQDLDSEMLNHESSQI*ESSGPS Trigger: AGAAGGACCACTGCTTTCCAAAATCTGTGAGCTTTC...GTGATTCAGCATCTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172190.4 |
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| CDS-3UTR CAA 90 bp | AATATGGGAGGAGTAGGTTTCCCTCCAAGGATCATGGAATATCTGCAACTGGATGGTCCTTCTCTGTATTaGCATAATGACTCTCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: NMGGVGFPPRIMEYLQLDGPSLY*HNDSLD Trigger: GTCCAGAGAGTCATTATGCAAATACAGAGAAGGACC...ATCCAGTTGCAGATATTCCATGATCCTTGGAGGGAAACCTACTCCTCCCATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172190.4 |
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| CDS-3UTR CAA 90 bp | GAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGATGCTGAATCACCATGTTCACTCAAGATaGTATCATAAGGTCCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: EMIQEWRRQDLDSEMLNHHVHSR*YHKVQK Trigger: CTTTTGGACCTTATGATACAATCTTGAGTGAACATG...GTGATTCAGCATCTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
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| CDS-3UTR CAA 90 bp | ATTACATTATGTTGGTATGGTAGTGTGAATGGGCTTGACCCAGAAAGTGGCACTCATATCCTGAATCTTTaGTCTGTCTCCATTCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ITLCWYGSVNGLDPESGTHILNL*SVSILN Trigger: GTTTAGAATGGAGACAGACAAAAGATTCAGGATATG...AGTGCCACTTTCTGGGTCAAGCCCATTCACACTACCATACCAACATAATGTAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231815.3 |
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| CDS-3UTR CAA 90 bp | AAGCTTCTACTAAGACTTCATTTAGCCATTCCATCAAGCAGTAAACAGCAAACTACAGCTGAACCCTTGTaGCACAAAAGGATGATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KLLLRLHLAIPSSSKQQTTAEPL*HKRMMC Trigger: ACACATCATCCTTTTGTGCAACAAGGGTTCAGCTGT...AGTTTGCTGTTTACTGCTTGATGGAATGGCTAAATGAAGTCTTAGTAGAAGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172190.4 |
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| CDS-3UTR CAA 90 bp | ATATACACATTTGAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGCATGTTCACTCAAGATaGTATCATAAGGTCCAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: IYTFEMIQEWRRQDLDSEHVHSR*YHKVQK Trigger: CTTTTGGACCTTATGATACAATCTTGAGTGAACATG...CTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTCAAATGTGTATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
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| CDS-3UTR CAA 90 bp | AGGATATACACATTTGAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAAGAATTTTATTTCCTTaGTGGTTATCGGGGAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: RIYTFEMIQEWRRQDLDSRILFP*WLSGRM Trigger: CATTCTCCCCGATAACCACAAAGGAAATAAAATTCT...TGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTCAAATGTGTATATCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
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| CDS-3UTR CAA 90 bp | AAAATAGATTTCCAGTTAAGACATGATTTCCCTCTAGTTGAGCTGGTCATCAGCCAAAGAAGCATTGGTTaGACACTTGTCCAAAACATG | + |
|
Preference number: 5 (lower is better) Translates to: KIDFQLRHDFPLVELVISQRSIG*TLVQNM Trigger: CATGTTTTGGACAAGTGTCAAACCAATGCTTCTTTG...GCTGATGACCAGCTCAACTAGAGGGAAATCATGTCTTAACTGGAAATCTATTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
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| CDS-3UTR CAA 90 bp | ATATACACATTTGAAATGATACAGGAATGGAGGCGTCAGGACTTAGACTCAGAGCATATCCTGAATCTTTaGTCTGTCTCCATTCTAAAC | + |
|
Preference number: 5 (lower is better) Translates to: IYTFEMIQEWRRQDLDSEHILNL*SVSILN Trigger: GTTTAGAATGGAGACAGACAAAAGATTCAGGATATG...CTCTGAGTCTAAGTCCTGACGCCTCCATTCCTGTATCATTTCAAATGTGTATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
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| CDS-3UTR CAA 90 bp | AAAATAGATTTCCAGTTAAGACATGATTTCCCTCTAGTTGAGCTGGTCATCAGCAGAATTTTATTTCCTTaGTGGTTATCGGGGAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: KIDFQLRHDFPLVELVISRILFP*WLSGRM Trigger: CATTCTCCCCGATAACCACAAAGGAAATAAAATTCT...GCTGATGACCAGCTCAACTAGAGGGAAATCATGTCTTAACTGGAAATCTATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172190.4 ENSMUST00000231815.3 |
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