Pregenerated sensors for VMN2R93 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079698Ensembl transcript IDs: ENSMUST00000079206.8, ENSMUST00000231879.3, ENSMUST00000231938.2
Found 290 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GCTGAGCAAGCCAGTGAAAGCAAGCCAGTAAAGAACATCCCTCCATaGCCTCTGCATCAGCTCCTGCTTCCTGACCTGATTGAGTTCCAG | + |
Preference number: 1 (lower is better) Translates to: AEQASESKPVKNIPP*PLHQLLLPDLIEFQ Trigger: CTGGAACTCAATCAGGTCAGGAAGCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCTTTCACTGGCTTGCTCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR TCA 90 bp | TCTTTAGAAGGTTTGGAGACTGTACTGGCTGGTTTTATGTGTCACTaGGAAAGGAGCTTTAGCTGGGGAAGTGCCTCCATGAGATCCAGC | + |
Preference number: 1 (lower is better) Translates to: SLEGLETVLAGFMCH*ERSFSWGSASMRSS Trigger: GCTGGATCTCATGGAGGCACTTCCCCAGCTAAAGCTCCTTTCTCAGTGACACATAAAACCAGCCAGTACAGTCTCCAAACCTTCTAAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR TCA 90 bp | GTCAGGCAGAATACCCTGACATTATTACTGATACAACTTTGTGCTTaGAGGGAGCCCACACTTCTTGGTCTGAACCCCAAACACATACAT | + |
Preference number: 1 (lower is better) Translates to: VRQNTLTLLLIQLCA*REPTLLGLNPKHIH Trigger: ATGTATGTGTTTGGGGTTCAGACCAAGAAGTGTGGGCTCCCTTCAAGCACAAAGTTGTATCAGTAATAATGTCAGGGTATTCTGCCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR GCA 90 bp | CAGAAAGCTCACAGATTTTTGGAGGCAGTTGTTCCTCTCTGTATTTaGATAATGACTCTCTGGACACTTCACACACTGGTCTACATCTGG | + |
Preference number: 1 (lower is better) Translates to: QKAHRFLEAVVPLCI*IMTLWTLHTLVYIW Trigger: CCAGATGTAGACCAGTGTGTGAAGTGTCCAGAGAGTCATTATGCAAATACAGAGAGGAACAACTGCCTCCAAAAATCTGTGAGCTTTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR TCA 90 bp | AGAACATATCCCACATATAGGCAAAAGCTTTTTGTTCCAGTTGTTTaGGACACACATGGACACAAAGCTGACCATCTGCTACACATGTGC | + |
Preference number: 1 (lower is better) Translates to: RTYPTYRQKLFVPVV*DTHGHKADHLLHMC Trigger: GCACATGTGTAGCAGATGGTCAGCTTTGTGTCCATGTGTGTCTCAAACAACTGGAACAAAAAGCTTTTGCCTATATGTGGGATATGTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR TCA 90 bp | TGTTTAAACAAGCCTATTGGGCCCAGAGAGTTGAAAGTACTAATTTaGATATGTTTGGCCAAGGGAGTTGTACCACTTGAAGGTGTGGCA | + |
Preference number: 1 (lower is better) Translates to: CLNKPIGPRELKVLI*ICLAKGVVPLEGVA Trigger: TGCCACACCTTCAAGTGGTACAACTCCCTTGGCCAAACATATTCAAATTAGTACTTTCAACTCTCTGGGCCCAATAGGCTTGTTTAAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR GCA 90 bp | TCCATGTTCAGTATGAGCATCTTGGTCAATGAATGGTGGATAAGTTaGCATCCATATTCCACAAAGAAGAAGTTGGATCAGGGTGCAGAT | + |
Preference number: 1 (lower is better) Translates to: SMFSMSILVNEWWIS*HPYSTKKKLDQGAD Trigger: ATCTGCACCCTGATCCAACTTCTTCTTTGTGGAATATGGATGGCAACTTATCCACCATTCATTGACCAAGATGCTCATACTGAACATGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR CCA 90 bp | ATTTGCATAATGACTCTCTGGACACTTCACACACTGGTCTACATCTaGTCAGAAATAGAGGTGATCAAGAGATTAGGAGTTCAGGCTAAG | + |
Preference number: 1 (lower is better) Translates to: ICIMTLWTLHTLVYI*SEIEVIKRLGVQAK Trigger: CTTAGCCTGAACTCCTAATCTCTTGATCACCTCTATTTCTGACCAGATGTAGACCAGTGTGTGAAGTGTCCAGAGAGTCATTATGCAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR CCA 90 bp | GATGATGTGTCCATGTTCAGTATGAGCATCTTGGTCAATGAATGGTaGATAAGTTGCCATCCATATTCCACAAAGAAGAAGTTGGATCAG | + |
Preference number: 1 (lower is better) Translates to: DDVSMFSMSILVNEW*ISCHPYSTKKKLDQ Trigger: CTGATCCAACTTCTTCTTTGTGGAATATGGATGGCAACTTATCCACCATTCATTGACCAAGATGCTCATACTGAACATGGACACATCATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR GCA 90 bp | TTGTTCCAGTTGTTTGAGACACACATGGACACAAAGCTGACCATCTaGTACACATGTGCAATGAAGCCTAGGTTAAATGTAAGGTTTAAA | + |
Preference number: 1 (lower is better) Translates to: LFQLFETHMDTKLTI*YTCAMKPRLNVRFK Trigger: TTTAAACCTTACATTTAACCTAGGCTTCATTGCACATGTGTAGCAGATGGTCAGCTTTGTGTCCATGTGTGTCTCAAACAACTGGAACAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR GCA 90 bp | GTAGGTTGGACAAAATGTACTTTTTATAATGCTATGCTTAGGCATTaGCACCATAGAGTCAAGTGTTTAAACAAGCCTATTGGGCCCAGA | + |
Preference number: 1 (lower is better) Translates to: VGWTKCTFYNAMLRH*HHRVKCLNKPIGPR Trigger: TCTGGGCCCAATAGGCTTGTTTAAACACTTGACTCTATGGTGGCAATGCCTAAGCATAGCATTATAAAAAGTACATTTTGTCCAACCTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR CCA 90 bp | AAGGATGATGTGTCCATGTTCAGTATGAGCATCTTGGTCAATGAATaGTGGATAAGTTGCCATCCATATTCCACAAAGAAGAAGTTGGAT | + |
Preference number: 1 (lower is better) Translates to: KDDVSMFSMSILVNE*WISCHPYSTKKKLD Trigger: ATCCAACTTCTTCTTTGTGGAATATGGATGGCAACTTATCCACCATTCATTGACCAAGATGCTCATACTGAACATGGACACATCATCCTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR CCA 90 bp | GGATCCCAGACATTGGAACAAGAAACTAGAACATTGAAGTTGCCTTaGAAACTCCAAAATGTTCAAGATTCTAGAGGCATGTGTTATCTG | + |
Preference number: 1 (lower is better) Translates to: GSQTLEQETRTLKLP*KLQNVQDSRGMCYL Trigger: CAGATAACACATGCCTCTAGAATCTTGAACATTTTGGAGTTTCCAAGGCAACTTCAATGTTCTAGTTTCTTGTTCCAATGTCTGGGATCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR TCA 90 bp | AGATTATGTGTGGATCCCAGACATTGGAACAAGAAACTAGAACATTaGAGTTGCCTTGGAAACTCCAAAATGTTCAAGATTCTAGAGGCA | + |
Preference number: 1 (lower is better) Translates to: RLCVDPRHWNKKLEH*SCLGNSKMFKILEA Trigger: TGCCTCTAGAATCTTGAACATTTTGGAGTTTCCAAGGCAACTTCAATGTTCTAGTTTCTTGTTCCAATGTCTGGGATCCACACATAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR GCA 90 bp | TCTTTCCTTGAAGCCTTCACAAGATGTAGAATTTTCAGCTCCTGCTaGATCAAGTCTGATTGGATGATACCATGCTCTCATATTTATGAT | + |
Preference number: 1 (lower is better) Translates to: SFLEAFTRCRIFSSC*IKSDWMIPCSHIYD Trigger: ATCATAAATATGAGAGCATGGTATCATCCAATCAGACTTGATGCAGCAGGAGCTGAAAATTCTACATCTTGTGAAGGCTTCAAGGAAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR-3UTR CCA 90 bp | GTGGGTAAACCTTCAGAGCCACCACAGAGGGATGGGGAGTGGAAAGAGGAGTTCAGCACAAAGCTATGCTaGCAAGAGCCATCCCCAGGG | + |
Preference number: 2 (lower is better) Translates to: VGKPSEPPQRDGEWKEEFSTKLC*QEPSPG Trigger: CCCTGGGGATGGCTCTTGCCAGCATAGCTTTGTGCT...GAACTCCTCTTTCCACTCCCCATCCCTCTGTGGTGGCTCTGAAGGTTTACCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | GTGGGTAAACCTTCAGAGCCACCACAGAGGGATGGGGAGTGGAAAGAGGAGTTCAGAGGGGGAACAGGGTaGAAAAGTCTGGGACAGAAG | + |
Preference number: 2 (lower is better) Translates to: VGKPSEPPQRDGEWKEEFRGGTG*KSLGQK Trigger: CTTCTGTCCCAGACTTTTTCACCCTGTTCCCCCTCT...GAACTCCTCTTTCCACTCCCCATCCCTCTGTGGTGGCTCTGAAGGTTTACCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR CCA 90 bp | GTGGGTAAACCTTCAGAGCCACCACAGAGGGATGGGGAGTGGAAAGAGGAGTTCGGAGCCCACACTTCTTaGTCTGAACCCCAAACACAT | + |
Preference number: 2 (lower is better) Translates to: VGKPSEPPQRDGEWKEEFGAHTS*SEPQTH Trigger: ATGTGTTTGGGGTTCAGACCAAGAAGTGTGGGCTCC...GAACTCCTCTTTCCACTCCCCATCCCTCTGTGGTGGCTCTGAAGGTTTACCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | GTGGGTAAACCTTCAGAGCCACCACAGAGGGATGGGGAGTGGAAAGAGGAGTTCAAGGTTGACCAGGGATaGGCACAACTTGGATTGCAT | + |
Preference number: 2 (lower is better) Translates to: VGKPSEPPQRDGEWKEEFKVDQG*AQLGLH Trigger: ATGCAATCCAAGTTGTGCTCATCCCTGGTCAACCTT...GAACTCCTCTTTCCACTCCCCATCCCTCTGTGGTGGCTCTGAAGGTTTACCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR GCA 90 bp | GTGGGTAAACCTTCAGAGCCACCACAGAGGGATGGGGAGTGGAAAGAGGAGTTCACTGATACAACTTTGTaGTTGAAGGGAGCCCACACT | + |
Preference number: 2 (lower is better) Translates to: VGKPSEPPQRDGEWKEEFTDTTL*LKGAHT Trigger: AGTGTGGGCTCCCTTCAAGCACAAAGTTGTATCAGT...GAACTCCTCTTTCCACTCCCCATCCCTCTGTGGTGGCTCTGAAGGTTTACCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR GCA 90 bp | GTGGGTAAACCTTCAGAGCCACCACAGAGGGATGGGGAGTGGAAAGAGGAGTTCACCATAGAGGCCTTTTaGAAGCTAACTTCTCCAAGA | + |
Preference number: 2 (lower is better) Translates to: VGKPSEPPQRDGEWKEEFTIEAF*KLTSPR Trigger: TCTTGGAGAAGTTAGCTTGCAAAAGGCCTCTATGGT...GAACTCCTCTTTCCACTCCCCATCCCTCTGTGGTGGCTCTGAAGGTTTACCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR CCA 90 bp | CAACTCCTTTTCTCAGGCAGGGACCCATGTATTTTCAGCCCAAACTCTATCCTTGCCACCACAGAGGGATaGGGAGTGGAAAGAGGAGTT | + |
Preference number: 2 (lower is better) Translates to: QLLFSGRDPCIFSPNSILATTEG*GVERGV Trigger: AACTCCTCTTTCCACTCCCCATCCCTCTGTGGTGGC...AAGGATAGAGTTTGGGCTGAAAATACATGGGTCCCTGCCTGAGAAAAGGAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | GTGGGTAAACCTTCAGAGCCACCACAGAGGGATGGGGAGTGGAAAGAGGAGTTCGCTGATGTATTTGGCTaGCCAATGAAGTTCAAAGAA | + |
Preference number: 2 (lower is better) Translates to: VGKPSEPPQRDGEWKEEFADVFG*PMKFKE Trigger: TTCTTTGAACTTCATTGGTCAGCCAAATACATCAGC...GAACTCCTCTTTCCACTCCCCATCCCTCTGTGGTGGCTCTGAAGGTTTACCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | AGGACCGAATGGAAGGCAACAGCTGAGCCCTTGTTGCACAAAAGGATGATGTGTTACAAACCACTGATATaGACCAGGAGTGGAGTCATC | + |
Preference number: 2 (lower is better) Translates to: RTEWKATAEPLLHKRMMCYKPLI*TRSGVI Trigger: GATGACTCCACTCCTGGTTCATATCAGTGGTTTGTA...ACACATCATCCTTTTGTGCAACAAGGGCTCAGCTGTTGCCTTCCATTCGGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | CCAGAGATAGCCAGGGTTGGACCTAGAGCTCCAGGTGTACTTGGTGTTAGAGTCAGGATTGAAACCAGCTaGGTAGAAAGAAGTTACAGT | + |
Preference number: 2 (lower is better) Translates to: PEIARVGPRAPGVLGVRVRIETS*VERSYS Trigger: ACTGTAACTTCTTTCTACTCAGCTGGTTTCAATCCT...GACTCTAACACCAAGTACACCTGGAGCTCTAGGTCCAACCCTGGCTATCTCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR-3UTR TCA 90 bp | CAACTCCTTTTCTCAGGCAGGGACCCATGTATTTTCAGCCCAAACTCTATCCTTAAGGTTGACCAGGGATaGGCACAACTTGGATTGCAT | + |
Preference number: 2 (lower is better) Translates to: QLLFSGRDPCIFSPNSILKVDQG*AQLGLH Trigger: ATGCAATCCAAGTTGTGCTCATCCCTGGTCAACCTT...AAGGATAGAGTTTGGGCTGAAAATACATGGGTCCCTGCCTGAGAAAAGGAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | TGGTACCATCTCTGGGATTCTATACGAAAGCAAGCTGAGCAAGCCAGTGAAAGCATAGTGAAGAAAGGTTaGCCAGGGATGAGCACAACT | + |
Preference number: 2 (lower is better) Translates to: WYHLWDSIRKQAEQASESIVKKG*PGMSTT Trigger: AGTTGTGCTCATCCCTGGTCAACCTTTCTTCACTAT...GCTTTCACTGGCTTGCTCAGCTTGCTTTCGTATAGAATCCCAGAGATGGTACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | TCTTCTCACATACAACATCATATTCGCCTCTGCATAAGTATGGGCACACTGGTTGCAAAGGTGGTCTGCTaGAGGATGCAGGCTGATGTA | + |
Preference number: 2 (lower is better) Translates to: SSHIQHHIRLCISMGTLVAKVVC*RMQADV Trigger: TACATCAGCCTGCATCCTTCAGCAGACCACCTTTGC...AACCAGTGTGCCCATACTTATGCAGAGGCGAATATGATGTTGTATGTGAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR-3UTR CCA 90 bp | CAACTCCTTTTCTCAGGCAGGGACCCATGTATTTTCAGCCCAAACTCTATCCTTGCGAGTCATTTTCTGTaGGTAAACCTTCAGAGCCAC | + |
Preference number: 2 (lower is better) Translates to: QLLFSGRDPCIFSPNSILASHFL*VNLQSH Trigger: GTGGCTCTGAAGGTTTACCCACAGAAAATGACTCGC...AAGGATAGAGTTTGGGCTGAAAATACATGGGTCCCTGCCTGAGAAAAGGAGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR CCA 90 bp | TGGAGAGCAGCTGAGGCTTGGCACTATGAGAAGCCATGGAATACCATTGTTGGGTTTAAACAAGCCTATTaGGCCCAGAGAGTTGAAAGT | + |
Preference number: 2 (lower is better) Translates to: WRAAEAWHYEKPWNTIVGFKQAY*AQRVES Trigger: ACTTTCAACTCTCTGGGCCCAATAGGCTTGTTTAAA...CCCAACAATGGTATTCCATGGCTTCTCATAGTGCCAAGCCTCAGCTGCTCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR-3UTR CCA 90 bp | TGGAGAGCAGCTGAGGCTTGGCACTATGAGAAGCCATGGAATACCATTGTTGGGCTAGAAGATTATGTGTaGATCCCAGACATTGGAACA | + |
Preference number: 2 (lower is better) Translates to: WRAAEAWHYEKPWNTIVGLEDYV*IPDIGT Trigger: TGTTCCAATGTCTGGGATCCACACATAATCTTCTAG...CCCAACAATGGTATTCCATGGCTTCTCATAGTGCCAAGCCTCAGCTGCTCTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR-3UTR TCA 90 bp | CCATTCTCCTTCTACTGTATGGTAGTAGGTGACTGTATCTTTGCGAGTCATTTTGAAGGCAAGGAGTGCTaGGCTGGAAGCCAAGATAGA | + |
Preference number: 2 (lower is better) Translates to: PFSFYCMVVGDCIFASHFEGKEC*AGSQDR Trigger: TCTATCTTGGCTTCCAGCTCAGCACTCCTTGCCTTC...AAAATGACTCGCAAAGATACAGTCACCTACTACCATACAGTAGAAGGAGAATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR-3UTR GCA 90 bp | TCCCCATTCTCCTTCTACTGTATGGTAGTAGGTGACTGTATCTTTGCGAGTCATGCTAGGATGGAAGCTTaGATGTCCCAACTGATGGAT | + |
Preference number: 2 (lower is better) Translates to: SPFSFYCMVVGDCIFASHARMEA*MSQLMD Trigger: ATCCATCAGTTGGGACATGCAAGCTTCCATCCTAGC...ATGACTCGCAAAGATACAGTCACCTACTACCATACAGTAGAAGGAGAATGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR GCA 90 bp | CAACTCCTTTTCTCAGGCAGGGACCCATGTATTTTCAGCCCAAACTCTATCCTTTTTGTAGTCACTTTATaGCCCAGGAAAGGAGGATGC | + |
Preference number: 2 (lower is better) Translates to: QLLFSGRDPCIFSPNSILFVVTL*PRKGGC Trigger: GCATCCTCCTTTCCTGGGGCATAAAGTGACTACAAA...AAGGATAGAGTTTGGGCTGAAAATACATGGGTCCCTGCCTGAGAAAAGGAGTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR GCA 90 bp | CAACTCCTTTTCTCAGGCAGGGACCCATGTATTTTCAGCCCAAACTCTATCCTTACTGATACAACTTTGTaGTTGAAGGGAGCCCACACT | + |
Preference number: 2 (lower is better) Translates to: QLLFSGRDPCIFSPNSILTDTTL*LKGAHT Trigger: AGTGTGGGCTCCCTTCAAGCACAAAGTTGTATCAGT...AAGGATAGAGTTTGGGCTGAAAATACATGGGTCCCTGCCTGAGAAAAGGAGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR CCA 90 bp | GGCCCTGACATTTTTCTATACTGGAGCATAGAACTTTCTCAGTTTCTTAATGGTGCCACCACAGAGGGATaGGGAGTGGAAAGAGGAGTT | + |
Preference number: 2 (lower is better) Translates to: GPDIFLYWSIELSQFLNGATTEG*GVERGV Trigger: AACTCCTCTTTCCACTCCCCATCCCTCTGTGGTGGC...ACCATTAAGAAACTGAGAAAGTTCTATGCTCCAGTATAGAAAAATGTCAGGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR CCA 90 bp | TGGTACCATCTCTGGGATTCTATACGAAAGCAAGCTGAGCAAGCCAGTGAAAGCAAGCTCACAGATTTTTaGAGGCAGTTGTTCCTCTCT | + |
Preference number: 2 (lower is better) Translates to: WYHLWDSIRKQAEQASESKLTDF*RQLFLS Trigger: AGAGAGGAACAACTGCCTCCAAAAATCTGTGAGCTT...GCTTTCACTGGCTTGCTCAGCTTGCTTTCGTATAGAATCCCAGAGATGGTACCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR-3UTR CCA 90 bp | CAAAGAAACTGTGTTCCAGAGATAGCCAGGGTTGGACCTAGAGCTCCAGGTGTAGTGGATCCCAGACATTaGAACAAGAAACTAGAACAT | + |
Preference number: 2 (lower is better) Translates to: QRNCVPEIARVGPRAPGVVDPRH*NKKLEH Trigger: ATGTTCTAGTTTCTTGTTCCAATGTCTGGGATCCAC...TACACCTGGAGCTCTAGGTCCAACCCTGGCTATCTCTGGAACACAGTTTCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR CAA 90 bp | GCAGGCCACCTAGAAGAACATATCCCACATATAGGCAAAAGCTTTTaGTTCCAGTTGTTTGAGACACACATGGACACAAAGCTGACCATC | + |
Preference number: 2 (lower is better) Translates to: AGHLEEHIPHIGKSF*FQLFETHMDTKLTI Trigger: GATGGTCAGCTTTGTGTCCATGTGTGTCTCAAACAACTGGAACAAAAAGCTTTTGCCTATATGTGGGATATGTTCTTCTAGGTGGCCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR CAA 90 bp | CCAGAAAGCTCACAGATTTTTGGAGGCAGTTGTTCCTCTCTGTATTaGCATAATGACTCTCTGGACACTTCACACACTGGTCTACATCTG | + |
Preference number: 2 (lower is better) Translates to: PESSQIFGGSCSSLY*HNDSLDTSHTGLHL Trigger: CAGATGTAGACCAGTGTGTGAAGTGTCCAGAGAGTCATTATGCAAATACAGAGAGGAACAACTGCCTCCAAAAATCTGTGAGCTTTCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | TCCCCATTCTCCTTCTACTGTATGGTAGTAGGTGACTGTATCTTTGCGAGTCATTACAAACCACTGATATaGACCAGGAGTGGAGTCATC | + |
Preference number: 2 (lower is better) Translates to: SPFSFYCMVVGDCIFASHYKPLI*TRSGVI Trigger: GATGACTCCACTCCTGGTTCATATCAGTGGTTTGTA...ATGACTCGCAAAGATACAGTCACCTACTACCATACAGTAGAAGGAGAATGGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | TTCACCCCCTCCCACAATTCTTCTCACATACAACATCATATTCGCCTCTGCATACCACACTTCTTGGTCTaGACCCCAAACACATACATA | + |
Preference number: 2 (lower is better) Translates to: FTPSHNSSHIQHHIRLCIPHFLV*TPNTYI Trigger: TATGTATGTGTTTGGGGTTCAGACCAAGAAGTGTGG...TATGCAGAGGCGAATATGATGTTGTATGTGAGAAGAATTGTGGGAGGGGGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | TGGTACCATCTCTGGGATTCTATACGAAAGCAAGCTGAGCAAGCCAGTGAAAGCCAGAGGTTAACAGAATaGTCAATCAATAACCAGGCA | + |
Preference number: 2 (lower is better) Translates to: WYHLWDSIRKQAEQASESQRLTE*SINNQA Trigger: TGCCTGGTTATTGATTGATCATTCTGTTAACCTCTG...GCTTTCACTGGCTTGCTCAGCTTGCTTTCGTATAGAATCCCAGAGATGGTACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | AGAGTACAAAGAAACTGTGTTCCAGAGATAGCCAGGGTTGGACCTAGAGCTCCACCTGATAATAAGGATTaGAACCAGCTGAGTAGAAAG | + |
Preference number: 2 (lower is better) Translates to: RVQRNCVPEIARVGPRAPPDNKD*NQLSRK Trigger: CTTTCTACTCAGCTGGTTTCAATCCTTATTATCAGG...TGGAGCTCTAGGTCCAACCCTGGCTATCTCTGGAACACAGTTTCTTTGTACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR-3UTR CCA 90 bp | CCATTCTCCTTCTACTGTATGGTAGTAGGTGACTGTATCTTTGCGAGTCATTTTCAGAGGGATGGGGAGTaGAAAGAGGAGTTCAGTATC | + |
Preference number: 2 (lower is better) Translates to: PFSFYCMVVGDCIFASHFQRDGE*KEEFSI Trigger: GATACTGAACTCCTCTTTCCACTCCCCATCCCTCTG...AAAATGACTCGCAAAGATACAGTCACCTACTACCATACAGTAGAAGGAGAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR CCA 90 bp | TGGTACCATCTCTGGGATTCTATACGAAAGCAAGCTGAGCAAGCCAGTGAAAGCACAACATTGACAGCCTaGCAATCAGAGTTCCTTTTT | + |
Preference number: 2 (lower is better) Translates to: WYHLWDSIRKQAEQASESTTLTA*QSEFLF Trigger: AAAAAGGAACTCTGATTGCCAGGCTGTCAATGTTGT...GCTTTCACTGGCTTGCTCAGCTTGCTTTCGTATAGAATCCCAGAGATGGTACCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR CCA 90 bp | ATAGCCAGGGTTGGACCTAGAGCTCCAGGTGTACTTGGTGTTAGAGTCACCCATTGTGTTTATTGTGGATaGTATTGTTCACCTAACTTC | + |
Preference number: 2 (lower is better) Translates to: IARVGPRAPGVLGVRVTHCVYCG*YCSPNF Trigger: GAAGTTAGGTGAACAATACCATCCACAATAAACACA...ATGGGTGACTCTAACACCAAGTACACCTGGAGCTCTAGGTCCAACCCTGGCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
3UTR CAA 90 bp | TGGAAAGAGGAGTTCAGTATCAGGTGTGGGAAAGGACAGATGAGATaGCTAGGTGGCAACGAAAATGAACGTAAATATGCAACTAATGGG | + |
Preference number: 2 (lower is better) Translates to: WKEEFSIRCGKGQMR*LGGNENERKYATNG Trigger: CCCATTAGTTGCATATTTACGTTCATTTTCGTTGCCACCTAGCAATCTCATCTGTCCTTTCCCACACCTGATACTGAACTCCTCTTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR TCA 90 bp | TCTTCTCACATACAACATCATATTCGCCTCTGCATAAGTATGGGCACACTGGTTCCACACTTCTTGGTCTaGACCCCAAACACATACATA | + |
Preference number: 2 (lower is better) Translates to: SSHIQHHIRLCISMGTLVPHFLV*TPNTYI Trigger: TATGTATGTGTTTGGGGTTCAGACCAAGAAGTGTGG...AACCAGTGTGCCCATACTTATGCAGAGGCGAATATGATGTTGTATGTGAGAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR TCA 90 bp | CAACTCCTTTTCTCAGGCAGGGACCCATGTATTTTCAGCCCAAACTCTATCCTTTTTGTTCCAGTTGTTTaGGACACACATGGACACAAA | + |
Preference number: 2 (lower is better) Translates to: QLLFSGRDPCIFSPNSILFVPVV*DTHGHK Trigger: TTTGTGTCCATGTGTGTCTCAAACAACTGGAACAAA...AAGGATAGAGTTTGGGCTGAAAATACATGGGTCCCTGCCTGAGAAAAGGAGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR GCA 90 bp | CCATTCTCCTTCTACTGTATGGTAGTAGGTGACTGTATCTTTGCGAGTCATTTTGAGCACAACTTGGATTaGATTCCATGGTCAGGCAGA | + |
Preference number: 2 (lower is better) Translates to: PFSFYCMVVGDCIFASHFEHNLD*IPWSGR Trigger: TCTGCCTGACCATGGAATGCAATCCAAGTTGTGCTC...AAAATGACTCGCAAAGATACAGTCACCTACTACCATACAGTAGAAGGAGAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR GCA 90 bp | TTCACCCCCTCCCACAATTCTTCTCACATACAACATCATATTCGCCTCTGCATAGTCATACTTTACCAATaGATGACAGCCCATTTGTGC | + |
Preference number: 2 (lower is better) Translates to: FTPSHNSSHIQHHIRLCIVILYQ*MTAHLC Trigger: GCACAAATGGGCTGTCATGCATTGGTAAAGTATGAC...TATGCAGAGGCGAATATGATGTTGTATGTGAGAAGAATTGTGGGAGGGGGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR GCA 90 bp | CAAAGAAACTGTGTTCCAGAGATAGCCAGGGTTGGACCTAGAGCTCCAGGTGTACTTTTTATAATGCTATaGTTAGGCATTGCCACCATA | + |
Preference number: 2 (lower is better) Translates to: QRNCVPEIARVGPRAPGVLFIML*LGIATI Trigger: TATGGTGGCAATGCCTAAGCATAGCATTATAAAAAG...TACACCTGGAGCTCTAGGTCCAACCCTGGCTATCTCTGGAACACAGTTTCTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
3UTR-3UTR CCA 90 bp | TTCACCCCCTCCCACAATTCTTCTCACATACAACATCATATTCGCCTCTGCATAAGCCCACTGTTAGTCTaGCAGCTTTTGATGTTTCAA | + |
Preference number: 2 (lower is better) Translates to: FTPSHNSSHIQHHIRLCISPLLV*QLLMFQ Trigger: TTGAAACATCAAAAGCTGCCAGACTAACAGTGGGCT...TATGCAGAGGCGAATATGATGTTGTATGTGAGAAGAATTGTGGGAGGGGGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR TCA 90 bp | CCATTCTCCTTCTACTGTATGGTAGTAGGTGACTGTATCTTTGCGAGTCATTTTAAGGATACAAACCACTaGTATGAACCAGGAGTGGAG | + |
Preference number: 2 (lower is better) Translates to: PFSFYCMVVGDCIFASHFKDTNH*YEPGVE Trigger: CTCCACTCCTGGTTCATATCAGTGGTTTGTATCCTT...AAAATGACTCGCAAAGATACAGTCACCTACTACCATACAGTAGAAGGAGAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR TCA 90 bp | AATCTTCAAGCTAGGATGGAAGCTTGCATGTCCCAACTGATGGATTATCAACTTCCAGAAATTCTCAGATaGGTTGATGCACCAGAAAGC | + |
Preference number: 2 (lower is better) Translates to: NLQARMEACMSQLMDYQLPEILR*VDAPES Trigger: GCTTTCTGGTGCATCAACTCATCTGAGAATTTCTGG...AAGTTGATAATCCATCAGTTGGGACATGCAAGCTTCCATCCTAGCTTGAAGATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR TCA 90 bp | TTCACCCCCTCCCACAATTCTTCTCACATACAACATCATATTCGCCTCTGCATATTTGTTCCAGTTGTTTaGGACACACATGGACACAAA | + |
Preference number: 2 (lower is better) Translates to: FTPSHNSSHIQHHIRLCIFVPVV*DTHGHK Trigger: TTTGTGTCCATGTGTGTCTCAAACAACTGGAACAAA...TATGCAGAGGCGAATATGATGTTGTATGTGAGAAGAATTGTGGGAGGGGGTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | CCACTAGATTCATGTCCAAAGACCAAAGTCTTTAAGTGCTCAGTTTCCTTTTTGACTTTGGACCAAATATaGAGGCAAGGAGTGCTGAGC | + |
Preference number: 2 (lower is better) Translates to: PLDSCPKTKVFKCSVSFLTLDQI*RQGVLS Trigger: GCTCAGCACTCCTTGCCTTCATATTTGGTCCAAAGT...CAAAAAGGAAACTGAGCACTTAAAGACTTTGGTCTTTGGACATGAATCTAGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
||
3UTR-3UTR TCA 90 bp | AACAATCTACAGAACAAGATCCAGGACATCCAAGTTTACTCAGTCAAAGTGTTGGCCAGTAGCATGAAATaGTCACCAAGAACACCAGCA | + |
Preference number: 2 (lower is better) Translates to: NNLQNKIQDIQVYSVKVLASSMK*SPRTPA Trigger: TGCTGGTGTTCTTGGTGATCATTTCATGCTACTGGC...CAACACTTTGACTGAGTAAACTTGGATGTCCTGGATCTTGTTCTGTAGATTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR-3UTR GCA 90 bp | TGGTACCATCTCTGGGATTCTATACGAAAGCAAGCTGAGCAAGCCAGTGAAAGCTGTTGCTATATGTTTTaGTGGAGAGGCATAAATATG | + |
Preference number: 2 (lower is better) Translates to: WYHLWDSIRKQAEQASESCCYMF*WRGINM Trigger: CATATTTATGCCTCTCCAGCAAAACATATAGCAACA...GCTTTCACTGGCTTGCTCAGCTTGCTTTCGTATAGAATCCCAGAGATGGTACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR GCA 90 bp | CCACTAGATTCATGTCCAAAGACCAAAGTCTTTAAGTGCTCAGTTTCCTTTTTGGCTAGGATGGAAGCTTaGATGTCCCAACTGATGGAT | + |
Preference number: 2 (lower is better) Translates to: PLDSCPKTKVFKCSVSFLARMEA*MSQLMD Trigger: ATCCATCAGTTGGGACATGCAAGCTTCCATCCTAGC...CAAAAAGGAAACTGAGCACTTAAAGACTTTGGTCTTTGGACATGAATCTAGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR GCA 90 bp | CCATTCTCCTTCTACTGTATGGTAGTAGGTGACTGTATCTTTGCGAGTCATTTTTTTGTAGTCACTTTATaGCCCAGGAAAGGAGGATGC | + |
Preference number: 2 (lower is better) Translates to: PFSFYCMVVGDCIFASHFFVVTL*PRKGGC Trigger: GCATCCTCCTTTCCTGGGGCATAAAGTGACTACAAA...AAAATGACTCGCAAAGATACAGTCACCTACTACCATACAGTAGAAGGAGAATGG 42% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR CCA 90 bp | AGATTTATGTGTGAATATGAACTTCACTCTTTAGAAGGTTTGGAGACTGTACTGAGGGCCCATTGTGGGTaGTACCATCTCTGGGATTCT | + |
Preference number: 2 (lower is better) Translates to: RFMCEYELHSLEGLETVLRAHCG*YHLWDS Trigger: AGAATCCCAGAGATGGTACCACCCACAATGGGCCCT...CAGTACAGTCTCCAAACCTTCTAAAGAGTGAAGTTCATATTCACACATAAATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR CAA 90 bp | CTAGAAGAACATATCCCACATATAGGCAAAAGCTTTTTGTTCCAGTaGTTTGAGACACACATGGACACAAAGCTGACCATCTGCTACACA | + |
Preference number: 2 (lower is better) Translates to: LEEHIPHIGKSFLFQ*FETHMDTKLTICYT Trigger: TGTGTAGCAGATGGTCAGCTTTGTGTCCATGTGTGTCTCAAACAACTGGAACAAAAAGCTTTTGCCTATATGTGGGATATGTTCTTCTAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR CAA 90 bp | CTTGTTGCACAAAAGGATGATGTGTCCATGTTCAGTATGAGCATCTaGGTCAATGAATGGTGGATAAGTTGCCATCCATATTCCACAAAG | + |
Preference number: 2 (lower is better) Translates to: LVAQKDDVSMFSMSI*VNEWWISCHPYSTK Trigger: CTTTGTGGAATATGGATGGCAACTTATCCACCATTCATTGACCAAGATGCTCATACTGAACATGGACACATCATCCTTTTGTGCAACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | TTCACCCCCTCCCACAATTCTTCTCACATACAACATCATATTCGCCTCTGCATAAGAGGCATAAATATGTaGTACCCCAAATCTCATATG | + |
Preference number: 2 (lower is better) Translates to: FTPSHNSSHIQHHIRLCIRGINM*YPKSHM Trigger: CATATGAGATTTGGGGTATCACATATTTATGCCTCT...TATGCAGAGGCGAATATGATGTTGTATGTGAGAAGAATTGTGGGAGGGGGTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | GGCCCTGACATTTTTCTATACTGGAGCATAGAACTTTCTCAGTTTCTTAATGGTATACAACTTTGTGCTTaGAGGGAGCCCACACTTCTT | + |
Preference number: 2 (lower is better) Translates to: GPDIFLYWSIELSQFLNGIQLCA*REPTLL Trigger: AAGAAGTGTGGGCTCCCTTCAAGCACAAAGTTGTAT...ACCATTAAGAAACTGAGAAAGTTCTATGCTCCAGTATAGAAAAATGTCAGGGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | GATATGGAACATAATGAGGCCAACTCCTTTTCTCAGGCAGGGACCCATGTATTTATGAAACTCAGACCTTaGTTATTGGCCTTGACAATA | + |
Preference number: 2 (lower is better) Translates to: DMEHNEANSFSQAGTHVFMKLRP*LLALTI Trigger: TATTGTCAAGGCCAATAATCAAGGTCTGAGTTTCAT...AAATACATGGGTCCCTGCCTGAGAAAAGGAGTTGGCCTCATTATGTTCCATATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | AACAATCTACAGAACAAGATCCAGGACATCCAAGTTTACTCAGTCAAAGTGTTGCCAGCATCACTGAGGTaGAATCATGTGGAAAGTGTT | + |
Preference number: 2 (lower is better) Translates to: NNLQNKIQDIQVYSVKVLPASLR*NHVESV Trigger: AACACTTTCCACATGATTTCACCTCAGTGATGCTGG...CAACACTTTGACTGAGTAAACTTGGATGTCCTGGATCTTGTTCTGTAGATTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR-3UTR GCA 90 bp | TCTACTGGCTATTTAACTTTCAGTGTTCCCAATAGATATGGGAGTGTTTGTAACTGGTCTGCTGAAGGATaGAGGCTGATGTATTTGGCT | + |
Preference number: 2 (lower is better) Translates to: STGYLTFSVPNRYGSVCNWSAEG*RLMYLA Trigger: AGCCAAATACATCAGCCTGCATCCTTCAGCAGACCA...GTTACAAACACTCCCATATCTATTGGGAACACTGAAAGTTAAATAGCCAGTAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR-3UTR CCA 90 bp | GATATGGAACATAATGAGGCCAACTCCTTTTCTCAGGCAGGGACCCATGTATTTGAAGGTCTGCTTTACTaGATTTTTGTCAAACAACTC | + |
Preference number: 2 (lower is better) Translates to: DMEHNEANSFSQAGTHVFEGLLY*IFVKQL Trigger: GAGTTGTTTGACAAAAATCCAGTAAAGCAGACCTTC...AAATACATGGGTCCCTGCCTGAGAAAAGGAGTTGGCCTCATTATGTTCCATATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR CCA 90 bp | CCACTAGATTCATGTCCAAAGACCAAAGTCTTTAAGTGCTCAGTTTCCTTTTTGGGAGACTGTACTGGCTaGTTTTATGTGTCACTGAGA | + |
Preference number: 2 (lower is better) Translates to: PLDSCPKTKVFKCSVSFLGDCTG*FYVSLR Trigger: TCTCAGTGACACATAAAACCAGCCAGTACAGTCTCC...CAAAAAGGAAACTGAGCACTTAAAGACTTTGGTCTTTGGACATGAATCTAGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR CCA 90 bp | GTTCAAGAACAATCTACAGAACAAGATCCAGGACATCCAAGTTTACTCAGTCAAGTAATGCCAGCCCTTTaGAGGCACCTAGAAGATTAT | + |
Preference number: 2 (lower is better) Translates to: VQEQSTEQDPGHPSLLSQVMPAL*RHLEDY Trigger: ATAATCTTCTAGGTGCCTCCAAAGGGCTGGCATTAC...TTGACTGAGTAAACTTGGATGTCCTGGATCTTGTTCTGTAGATTGTTCTTGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR-3UTR TCA 90 bp | TCTACTGGCTATTTAACTTTCAGTGTTCCCAATAGATATGGGAGTGTTTGTAACAAGGATACAAACCACTaGTATGAACCAGGAGTGGAG | + |
Preference number: 2 (lower is better) Translates to: STGYLTFSVPNRYGSVCNKDTNH*YEPGVE Trigger: CTCCACTCCTGGTTCATATCAGTGGTTTGTATCCTT...GTTACAAACACTCCCATATCTATTGGGAACACTGAAAGTTAAATAGCCAGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | TCTTCTCACATACAACATCATATTCGCCTCTGCATAAGTATGGGCACACTGGTTCAAACCTGCAACATATaGAAATCCAGAACAAAACTG | + |
Preference number: 2 (lower is better) Translates to: SSHIQHHIRLCISMGTLVQTCNI*KSRTKL Trigger: CAGTTTTGTTCTGGATTTTCATATGTTGCAGGTTTG...AACCAGTGTGCCCATACTTATGCAGAGGCGAATATGATGTTGTATGTGAGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | CCATTCTCCTTCTACTGTATGGTAGTAGGTGACTGTATCTTTGCGAGTCATTTTCAGGAATATAAACCCTaGCTAAGACAGAGACTATGT | + |
Preference number: 2 (lower is better) Translates to: PFSFYCMVVGDCIFASHFQEYKP*LRQRLC Trigger: ACATAGTCTCTGTCTTAGTCAGGGTTTATATTCCTG...AAAATGACTCGCAAAGATACAGTCACCTACTACCATACAGTAGAAGGAGAATGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | GGCCCTGACATTTTTCTATACTGGAGCATAGAACTTTCTCAGTTTCTTAATGGTTGTGGAAATGTAAGCTaGATAAATCCTTTCCTCCCC | + |
Preference number: 2 (lower is better) Translates to: GPDIFLYWSIELSQFLNGCGNVS*INPFLP Trigger: GGGGAGGAAAGGATTTATTCAGCTTACATTTCCACA...ACCATTAAGAAACTGAGAAAGTTCTATGCTCCAGTATAGAAAAATGTCAGGGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | AACAATCTACAGAACAAGATCCAGGACATCCAAGTTTACTCAGTCAAAGTGTTGAATACCATTGTTGGGTaGAAAGCCTCAGTTCCAGTT | + |
Preference number: 2 (lower is better) Translates to: NNLQNKIQDIQVYSVKVLNTIVG*KASVPV Trigger: AACTGGAACTGAGGCTTTTCACCCAACAATGGTATT...CAACACTTTGACTGAGTAAACTTGGATGTCCTGGATCTTGTTCTGTAGATTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR-3UTR GCA 90 bp | GGCCCTGACATTTTTCTATACTGGAGCATAGAACTTTCTCAGTTTCTTAATGGTGTCATACTTTACCAATaGATGACAGCCCATTTGTGC | + |
Preference number: 2 (lower is better) Translates to: GPDIFLYWSIELSQFLNGVILYQ*MTAHLC Trigger: GCACAAATGGGCTGTCATGCATTGGTAAAGTATGAC...ACCATTAAGAAACTGAGAAAGTTCTATGCTCCAGTATAGAAAAATGTCAGGGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | AGATTTATGTGTGAATATGAACTTCACTCTTTAGAAGGTTTGGAGACTGTACTGATACAACTTTGTGCTTaGAGGGAGCCCACACTTCTT | + |
Preference number: 2 (lower is better) Translates to: RFMCEYELHSLEGLETVLIQLCA*REPTLL Trigger: AAGAAGTGTGGGCTCCCTTCAAGCACAAAGTTGTAT...CAGTACAGTCTCCAAACCTTCTAAAGAGTGAAGTTCATATTCACACATAAATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | GGCCCTGACATTTTTCTATACTGGAGCATAGAACTTTCTCAGTTTCTTAATGGTCAGAGGTTAACAGAATaGTCAATCAATAACCAGGCA | + |
Preference number: 2 (lower is better) Translates to: GPDIFLYWSIELSQFLNGQRLTE*SINNQA Trigger: TGCCTGGTTATTGATTGATCATTCTGTTAACCTCTG...ACCATTAAGAAACTGAGAAAGTTCTATGCTCCAGTATAGAAAAATGTCAGGGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | GGCCCTGACATTTTTCTATACTGGAGCATAGAACTTTCTCAGTTTCTTAATGGTTGTCCATGTTCAGTATaGGCATCTTGGTCAATGAAT | + |
Preference number: 2 (lower is better) Translates to: GPDIFLYWSIELSQFLNGCPCSV*ASWSMN Trigger: ATTCATTGACCAAGATGCTCATACTGAACATGGACA...ACCATTAAGAAACTGAGAAAGTTCTATGCTCCAGTATAGAAAAATGTCAGGGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR-3UTR TCA 90 bp | ATACATTACATTTACTCATTCAGGAGACAGAACAATGCAGATCTTGGAGTTCAACTCTCTTCAGGGAACTaGAGATTGTGTCATACAGAC | + |
Preference number: 2 (lower is better) Translates to: IHYIYSFRRQNNADLGVQLSSGN*RLCHTD Trigger: GTCTGTATGACACAATCTTCAGTTCCCTGAAGAGAG...TTGAACTCCAAGATCTGCATTGTTCTGTCTCCTGAATGAGTAAATGTAATGTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR-3UTR TCA 90 bp | AACAATCTACAGAACAAGATCCAGGACATCCAAGTTTACTCAGTCAAAGTGTTGCTGGTTTTAAAAGTATaGATGGATCATGGAGAGCAG | + |
Preference number: 2 (lower is better) Translates to: NNLQNKIQDIQVYSVKVLLVLKV*MDHGEQ Trigger: CTGCTCTCCATGATCCATTCATACTTTTAAAACCAG...CAACACTTTGACTGAGTAAACTTGGATGTCCTGGATCTTGTTCTGTAGATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
3UTR-3UTR GCA 90 bp | TCTTCTCACATACAACATCATATTCGCCTCTGCATAAGTATGGGCACACTGGTTATAGTAAAAGCCTTCTaGAAACCTGCAACATATGAA | + |
Preference number: 2 (lower is better) Translates to: SSHIQHHIRLCISMGTLVIVKAF*KPATYE Trigger: TTCATATGTTGCAGGTTTGCAGAAGGCTTTTACTAT...AACCAGTGTGCCCATACTTATGCAGAGGCGAATATGATGTTGTATGTGAGAAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR GCA 90 bp | CCACTAGATTCATGTCCAAAGACCAAAGTCTTTAAGTGCTCAGTTTCCTTTTTGAATAAGAACTTACTGTaGTCTGAGAGGCTCTACTCA | + |
Preference number: 2 (lower is better) Translates to: PLDSCPKTKVFKCSVSFLNKNLL*SERLYS Trigger: TGAGTAGAGCCTCTCAGAGCACAGTAAGTTCTTATT...CAAAAAGGAAACTGAGCACTTAAAGACTTTGGTCTTTGGACATGAATCTAGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR GCA 90 bp | GGCCCTGACATTTTTCTATACTGGAGCATAGAACTTTCTCAGTTTCTTAATGGTTCAGCATGTATATATTaGTGCTCTGGTTCAGGTCAT | + |
Preference number: 2 (lower is better) Translates to: GPDIFLYWSIELSQFLNGSACIY*CSGSGH Trigger: ATGACCTGAACCAGAGCAGCAATATATACATGCTGA...ACCATTAAGAAACTGAGAAAGTTCTATGCTCCAGTATAGAAAAATGTCAGGGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR GCA 90 bp | AACAATCTACAGAACAAGATCCAGGACATCCAAGTTTACTCAGTCAAAGTGTTGGAACCACTGTTATTATaGATACTCAGGAAGGACACT | + |
Preference number: 2 (lower is better) Translates to: NNLQNKIQDIQVYSVKVLEPLLL*ILRKDT Trigger: AGTGTCCTTCCTGAGTATGCATAATAACAGTGGTTC...CAACACTTTGACTGAGTAAACTTGGATGTCCTGGATCTTGTTCTGTAGATTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR-3UTR CCA 90 bp | TCTTCTCACATACAACATCATATTCGCCTCTGCATAAGTATGGGCACACTGGTTTATATAGTAAATTCCTaGGGAAGTTTAGGAAAGTGC | + |
Preference number: 2 (lower is better) Translates to: SSHIQHHIRLCISMGTLVYIVNS*GSLGKC Trigger: GCACTTTCCTAAACTTCCCCAGGAATTTACTATATA...AACCAGTGTGCCCATACTTATGCAGAGGCGAATATGATGTTGTATGTGAGAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR CCA 90 bp | AGATTTATGTGTGAATATGAACTTCACTCTTTAGAAGGTTTGGAGACTGTACTGGGAGACTGTACTGGCTaGTTTTATGTGTCACTGAGA | + |
Preference number: 2 (lower is better) Translates to: RFMCEYELHSLEGLETVLGDCTG*FYVSLR Trigger: TCTCAGTGACACATAAAACCAGCCAGTACAGTCTCC...CAGTACAGTCTCCAAACCTTCTAAAGAGTGAAGTTCATATTCACACATAAATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR CCA 90 bp | TCTATGCATTTCTTAAAATCTACAATGCAAGGGATTCTTCAAGTAGGCCCAGATACACTGGTCTACATCTaGTCAGAAATAGAGGTGATC | + |
Preference number: 2 (lower is better) Translates to: SMHFLKSTMQGILQVGPDTLVYI*SEIEVI Trigger: GATCACCTCTATTTCTGACCAGATGTAGACCAGTGT...ATCTGGGCCTACTTGAAGAATCCCTTGCATTGTAGATTTTAAGAAATGCATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
||
3UTR-3UTR CCA 90 bp | AAATGTGTCAGTATGGACATAGGCTTTAAACCCTTGTCCTACCTGCCTAGAAGATTTGGACATTGCTTTTaGTTAGATGACCATTTTCAC | + |
Preference number: 2 (lower is better) Translates to: KCVSMDIGFKPLSYLPRRFGHCF*LDDHFH Trigger: GTGAAAATGGTCATCTAACCAAAAGCAATGTCCAAA...TCTTCTAGGCAGGTAGGACAAGGGTTTAAAGCCTATGTCCATACTGACACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
3UTR-3UTR TCA 90 bp | AGCAGAAAAGGCAGTATATATAGTAAATTCCTGGGGAAGTTTAGGAAAGTGCACCAAACCTGCAACATATaGAAATCCAGAACAAAACTG | + |
Preference number: 2 (lower is better) Translates to: SRKGSIYSKFLGKFRKVHQTCNI*KSRTKL Trigger: CAGTTTTGTTCTGGATTTTCATATGTTGCAGGTTTG...GTGCACTTTCCTAAACTTCCCCAGGAATTTACTATATATACTGCCTTTTCTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR GCA 90 bp | CCATTCTCCTTCTACTGTATGGTAGTAGGTGACTGTATCTTTGCGAGTCATTTTATAGTAAAAGCCTTCTaGAAACCTGCAACATATGAA | + |
Preference number: 2 (lower is better) Translates to: PFSFYCMVVGDCIFASHFIVKAF*KPATYE Trigger: TTCATATGTTGCAGGTTTGCAGAAGGCTTTTACTAT...AAAATGACTCGCAAAGATACAGTCACCTACTACCATACAGTAGAAGGAGAATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR GCA 90 bp | TCTATGCATTTCTTAAAATCTACAATGCAAGGGATTCTTCAAGTAGGCCCAGATGAATGGTGGATAAGTTaGCATCCATATTCCACAAAG | + |
Preference number: 2 (lower is better) Translates to: SMHFLKSTMQGILQVGPDEWWIS*HPYSTK Trigger: CTTTGTGGAATATGGATGGCAACTTATCCACCATTC...ATCTGGGCCTACTTGAAGAATCCCTTGCATTGTAGATTTTAAGAAATGCATAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
||
3UTR-3UTR CCA 90 bp | CCATTCTCCTTCTACTGTATGGTAGTAGGTGACTGTATCTTTGCGAGTCATTTTGTCAAACAACTCTACTaGCTATTTAACTTTCAGTGT | + |
Preference number: 2 (lower is better) Translates to: PFSFYCMVVGDCIFASHFVKQLY*LFNFQC Trigger: ACACTGAAAGTTAAATAGCCAGTAGAGTTGTTTGAC...AAAATGACTCGCAAAGATACAGTCACCTACTACCATACAGTAGAAGGAGAATGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR CCA 90 bp | AGATTTATGTGTGAATATGAACTTCACTCTTTAGAAGGTTTGGAGACTGTACTGAGCCCACTGTTAGTCTaGCAGCTTTTGATGTTTCAA | + |
Preference number: 2 (lower is better) Translates to: RFMCEYELHSLEGLETVLSPLLV*QLLMFQ Trigger: TTGAAACATCAAAAGCTGCCAGACTAACAGTGGGCT...CAGTACAGTCTCCAAACCTTCTAAAGAGTGAAGTTCATATTCACACATAAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR CCA 90 bp | AGAACAATGCAGATCTTGGAGTTCAAGAACAATCTACAGAACAAGATCCAGGACACATTGAAGTTGCCTTaGAAACTCCAAAATGTTCAA | + |
Preference number: 2 (lower is better) Translates to: RTMQILEFKNNLQNKIQDTLKLP*KLQNVQ Trigger: TTGAACATTTTGGAGTTTCCAAGGCAACTTCAATGT...GTCCTGGATCTTGTTCTGTAGATTGTTCTTGAACTCCAAGATCTGCATTGTTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR-3UTR TCA 90 bp | TCTATGCATTTCTTAAAATCTACAATGCAAGGGATTCTTCAAGTAGGCCCAGATAGAGGCATAAATATGTaGTACCCCAAATCTCATATG | + |
Preference number: 2 (lower is better) Translates to: SMHFLKSTMQGILQVGPDRGINM*YPKSHM Trigger: CATATGAGATTTGGGGTATCACATATTTATGCCTCT...ATCTGGGCCTACTTGAAGAATCCCTTGCATTGTAGATTTTAAGAAATGCATAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR GCA 90 bp | CCACTAGATTCATGTCCAAAGACCAAAGTCTTTAAGTGCTCAGTTTCCTTTTTGCCTTCAGGCCAATGCTaGTGTAATTATATTTTTCAA | + |
Preference number: 2 (lower is better) Translates to: PLDSCPKTKVFKCSVSFLPSGQC*CNYIFQ Trigger: TTGAAAAATATAATTACAGCAGCATTGGCCTGAAGG...CAAAAAGGAAACTGAGCACTTAAAGACTTTGGTCTTTGGACATGAATCTAGTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR CCA 90 bp | CCACTAGATTCATGTCCAAAGACCAAAGTCTTTAAGTGCTCAGTTTCCTTTTTGGACATTTTTCTATACTaGAGCATAGAACTTTCTCAG | + |
Preference number: 2 (lower is better) Translates to: PLDSCPKTKVFKCSVSFLDIFLY*SIELSQ Trigger: CTGAGAAAGTTCTATGCTCCAGTATAGAAAAATGTC...CAAAAAGGAAACTGAGCACTTAAAGACTTTGGTCTTTGGACATGAATCTAGTGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR TCA 90 bp | ATACATTACATTTACTCATTCAGGAGACAGAACAATGCAGATCTTGGAGTTCAAGATCTTTCCATCTTCTaGTATCTTCCTCAATTTCTC | + |
Preference number: 2 (lower is better) Translates to: IHYIYSFRRQNNADLGVQDLSIF*YLPQFL Trigger: GAGAAATTGAGGAAGATATCAGAAGATGGAAAGATC...TTGAACTCCAAGATCTGCATTGTTCTGTCTCCTGAATGAGTAAATGTAATGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR-3UTR GCA 90 bp | AGATTTATGTGTGAATATGAACTTCACTCTTTAGAAGGTTTGGAGACTGTACTGCTTAACATGAAGGTCTaGTTTACTGGATTTTTGTCA | + |
Preference number: 2 (lower is better) Translates to: RFMCEYELHSLEGLETVLLNMKV*FTGFLS Trigger: TGACAAAAATCCAGTAAAGCAGACCTTCATGTTAAG...CAGTACAGTCTCCAAACCTTCTAAAGAGTGAAGTTCATATTCACACATAAATCT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR GCA 90 bp | AGATTTATGTGTGAATATGAACTTCACTCTTTAGAAGGTTTGGAGACTGTACTGATGAACAATAATCTTTaGCACTGCCTATTTTCCTTC | + |
Preference number: 2 (lower is better) Translates to: RFMCEYELHSLEGLETVLMNNNL*HCLFSF Trigger: GAAGGAAAATAGGCAGTGGCAAAGATTATTGTTCAT...CAGTACAGTCTCCAAACCTTCTAAAGAGTGAAGTTCATATTCACACATAAATCT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR CCA 90 bp | AGATTTATGTGTGAATATGAACTTCACTCTTTAGAAGGTTTGGAGACTGTACTGCATCTATTATGGATATaGAACATAATGAGGCCAACT | + |
Preference number: 2 (lower is better) Translates to: RFMCEYELHSLEGLETVLHLLWI*NIMRPT Trigger: AGTTGGCCTCATTATGTTCCATATCCATAATAGATG...CAGTACAGTCTCCAAACCTTCTAAAGAGTGAAGTTCATATTCACACATAAATCT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR CCA 72 bp | CCGAGGGCCAAGAAACAGAGGTATCCCAGGACCGAATaGAAGGCAACAGCTGAGCCCTTGTTGCACAAAAGG | + |
Preference number: 3 (lower is better) Translates to: PRAKKQRYPRTE*KATAEPLLHKR Trigger: CCTTTTGTGCAACAAGGGCTCAGCTGTTGCCTTCCATTCGGTCCTGGGATACCTCTGTTTCTTGGCCCTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
||
3UTR TCA 72 bp | GGTTTGGAGACTGTACTGGCTGGTTTTATGTGTCACTaGGAAAGGAGCTTTAGCTGGGGAAGTGCCTCCATG | + |
Preference number: 3 (lower is better) Translates to: GLETVLAGFMCH*ERSFSWGSASM Trigger: CATGGAGGCACTTCCCCAGCTAAAGCTCCTTTCTCAGTGACACATAAAACCAGCCAGTACAGTCTCCAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR CCA 72 bp | ACCAAACAGAGCCTAGAGTACTACAGAAGACAGAGCTaGATAGGTAATGCCAGCCCTTTGGAGGCACCTAGA | + |
Preference number: 3 (lower is better) Translates to: TKQSLEYYRRQS*IGNASPLEAPR Trigger: TCTAGGTGCCTCCAAAGGGCTGGCATTACCTATCCAGCTCTGTCTTCTGTAGTACTCTAGGCTCTGTTTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
3UTR-3UTR CAA 90 bp | AGGACCGAATGGAAGGCAACAGCTGAGCCCTTGTTGCACAAAAGGATGATGTGTACCACAGTAATAGCTTaGGCCAACACAGTGGCAAGA | + |
Preference number: 3 (lower is better) Translates to: RTEWKATAEPLLHKRMMCTTVIA*ANTVAR Trigger: TCTTGCCACTGTGTTGGCCAAAGCTATTACTGTGGT...ACACATCATCCTTTTGTGCAACAAGGGCTCAGCTGTTGCCTTCCATTCGGTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
||
3UTR TCA 72 bp | AACTTTGTGCTTGAAGGGAGCCCACACTTCTTGGTCTaGACCCCAAACACATACATAGCAGAGGGCTTCCTT | + |
Preference number: 3 (lower is better) Translates to: NFVLEGSPHFLV*TPNTYIAEGFL Trigger: AAGGAAGCCCTCTGCTATGTATGTGTTTGGGGTTCAGACCAAGAAGTGTGGGCTCCCTTCAAGCACAAAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR TCA 72 bp | TGGCACTATGAGAAGCCATGGAATACCATTGTTGGGTaGAAAGCCTCAGTTCCAGTTAAAGGCCCAGGAGAG | + |
Preference number: 3 (lower is better) Translates to: WHYEKPWNTIVG*KASVPVKGPGE Trigger: CTCTCCTGGGCCTTTAACTGGAACTGAGGCTTTTCACCCAACAATGGTATTCCATGGCTTCTCATAGTGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
3UTR GCA 72 bp | GCTGTTCCTTGGCCATGGGACACCATAGAGGCCTTTTaGAAGCTAACTTCTCCAAGAAGGAGAAATCCTGAT | + |
Preference number: 3 (lower is better) Translates to: AVPWPWDTIEAF*KLTSPRRRNPD Trigger: ATCAGGATTTCTCCTTCTTGGAGAAGTTAGCTTGCAAAAGGCCTCTATGGTGTCCCATGGCCAAGGAACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR CAA 90 bp | GTGGGTAAACCTTCAGAGCCACCACAGAGGGATGGGGAGTGGAAAGAGGAGTTCGCCCTCTCAATCTTGTaGACTATTTCAAAGTTTACT | + |
Preference number: 3 (lower is better) Translates to: VGKPSEPPQRDGEWKEEFALSIL*TISKFT Trigger: AGTAAACTTTGAAATAGTCAACAAGATTGAGAGGGC...GAACTCCTCTTTCCACTCCCCATCCCTCTGTGGTGGCTCTGAAGGTTTACCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR CAA 90 bp | TGGTACCATCTCTGGGATTCTATACGAAAGCAAGCTGAGCAAGCCAGTGAAAGCCATAGTGAAGAAAGGTaGACCAGGGATGAGCACAAC | + |
Preference number: 3 (lower is better) Translates to: WYHLWDSIRKQAEQASESHSEER*TRDEHN Trigger: GTTGTGCTCATCCCTGGTCAACCTTTCTTCACTATG...GCTTTCACTGGCTTGCTCAGCTTGCTTTCGTATAGAATCCCAGAGATGGTACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR CAA 90 bp | AGGACCGAATGGAAGGCAACAGCTGAGCCCTTGTTGCACAAAAGGATGATGTGTAAAGCTCACAGATTTTaGGAGGCAGTTGTTCCTCTC | + |
Preference number: 3 (lower is better) Translates to: RTEWKATAEPLLHKRMMCKAHRF*EAVVPL Trigger: GAGAGGAACAACTGCCTCCAAAAATCTGTGAGCTTT...ACACATCATCCTTTTGTGCAACAAGGGCTCAGCTGTTGCCTTCCATTCGGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
||
3UTR-3UTR CAA 90 bp | AGAGTACAAAGAAACTGTGTTCCAGAGATAGCCAGGGTTGGACCTAGAGCTCCAAGGGAGTTGTACCACTaGAAGGTGTGGCATTGTGAA | + |
Preference number: 3 (lower is better) Translates to: RVQRNCVPEIARVGPRAPRELYH*KVWHCE Trigger: TTCACAATGCCACACCTTCAAGTGGTACAACTCCCT...TGGAGCTCTAGGTCCAACCCTGGCTATCTCTGGAACACAGTTTCTTTGTACTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
3UTR TCA 72 bp | GGAAGGCAACAGCTGAGCCCTTGTTGCACAAAAGGATaGTGTGTCCATGTTCAGTATGAGCATCTTGGTCAA | + |
Preference number: 3 (lower is better) Translates to: GRQQLSPCCTKG*CVHVQYEHLGQ Trigger: TTGACCAAGATGCTCATACTGAACATGGACACATCATCCTTTTGTGCAACAAGGGCTCAGCTGTTGCCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR TCA 72 bp | AGACCCCAGTGTTCTGGAGATGCCAGTAGCATGAAATaGTCACCAAGAACACCAGCAACAGTAGAATGGAAC | + |
Preference number: 3 (lower is better) Translates to: RPQCSGDASSMK*SPRTPATVEWN Trigger: GTTCCATTCTACTGTTGCTGGTGTTCTTGGTGATCATTTCATGCTACTGGCATCTCCAGAACACTGGGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR-3UTR CAA 90 bp | CAAAGAAACTGTGTTCCAGAGATAGCCAGGGTTGGACCTAGAGCTCCAGGTGTACAAGAAACTAGAACATaGAAGTTGCCTTGGAAACTC | + |
Preference number: 3 (lower is better) Translates to: QRNCVPEIARVGPRAPGVQETRT*KLPWKL Trigger: GAGTTTCCAAGGCAACTTCAATGTTCTAGTTTCTTG...TACACCTGGAGCTCTAGGTCCAACCCTGGCTATCTCTGGAACACAGTTTCTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR TCA 72 bp | CATGACAGCCCATTTGTGCACATAGTGAAGAAAGGTTaGCCAGGGATGAGCACAACTTGGATTGCATTCCAT | + |
Preference number: 3 (lower is better) Translates to: HDSPFVHIVKKG*PGMSTTWIAFH Trigger: ATGGAATGCAATCCAAGTTGTGCTCATCCCTGGTCAACCTTTCTTCACTATGTGCACAAATGGGCTGTCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR GCA 72 bp | GCAGAATACCCTGACATTATTACTGATACAACTTTGTaGTTGAAGGGAGCCCACACTTCTTGGTCTGAACCC | + |
Preference number: 3 (lower is better) Translates to: AEYPDIITDTTL*LKGAHTSWSEP Trigger: GGGTTCAGACCAAGAAGTGTGGGCTCCCTTCAAGCACAAAGTTGTATCAGTAATAATGTCAGGGTATTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR CCA 72 bp | CCATGTGGTACTGGTTTTAAAAGTATGAATGGATCATaGAGAGCAGCTGAGGCTTGGCACTATGAGAAGCCA | + |
Preference number: 3 (lower is better) Translates to: PCGTGFKSMNGS*RAAEAWHYEKP Trigger: TGGCTTCTCATAGTGCCAAGCCTCAGCTGCTCTCCATGATCCATTCATACTTTTAAAACCAGTACCACATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR-3UTR CAA 90 bp | AGGACCGAATGGAAGGCAACAGCTGAGCCCTTGTTGCACAAAAGGATGATGTGTAATGAAACTCAGACCTaGATTATTGGCCTTGACAAT | + |
Preference number: 3 (lower is better) Translates to: RTEWKATAEPLLHKRMMCNETQT*IIGLDN Trigger: ATTGTCAAGGCCAATAATCAAGGTCTGAGTTTCATT...ACACATCATCCTTTTGTGCAACAAGGGCTCAGCTGTTGCCTTCCATTCGGTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
||
3UTR TCA 72 bp | ATCTTCAAGCTAGGATGGAAGCTTGCATGTCCCAACTaGTGGATTATCAACTTTCAGTGGCCAAAGGACCTA | + |
Preference number: 3 (lower is better) Translates to: IFKLGWKLACPN*WIINFQWPKDL Trigger: TAGGTCCTTTGGCCACTGAAAGTTGATAATCCATCAGTTGGGACATGCAAGCTTCCATCCTAGCTTGAAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR TCA 72 bp | GTAACACTTTGGACCAAATATGAAGGCAAGGAGTGCTaGGCTGGAAGCCAAGATAGAGAATACTTCCATAGC | + |
Preference number: 3 (lower is better) Translates to: VTLWTKYEGKEC*AGSQDREYFHS Trigger: GCTATGGAAGTATTCTCTATCTTGGCTTCCAGCTCAGCACTCCTTGCCTTCATATTTGGTCCAAAGTGTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
||
3UTR CCA 72 bp | GCAGTTGTTCCTCTCTGTATTTGCATAATGACTCTCTaGACACTTCACACACTGGTCTACATCTGGTCAGAA | + |
Preference number: 3 (lower is better) Translates to: AVVPLCICIMTL*TLHTLVYIWSE Trigger: TTCTGACCAGATGTAGACCAGTGTGTGAAGTGTCCAGAGAGTCATTATGCAAATACAGAGAGGAACAACTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
||
3UTR-3UTR CAA 90 bp | AGAACAATGCAGATCTTGGAGTTCAAGAACAATCTACAGAACAAGATCCAGGACAGTAACCATGTGAACTaGGTAGCACTGGACATGTGC | + |
Preference number: 3 (lower is better) Translates to: RTMQILEFKNNLQNKIQDSNHVN*VALDMC Trigger: GCACATGTCCAGTGCTACCAAGTTCACATGGTTACT...GTCCTGGATCTTGTTCTGTAGATTGTTCTTGAACTCCAAGATCTGCATTGTTCT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
3UTR TCA 72 bp | AATACCCTGACATTATTACTGATACAACTTTGTGCTTaGAGGGAGCCCACACTTCTTGGTCTGAACCCCAAA | + |
Preference number: 3 (lower is better) Translates to: NTLTLLLIQLCA*REPTLLGLNPK Trigger: TTTGGGGTTCAGACCAAGAAGTGTGGGCTCCCTTCAAGCACAAAGTTGTATCAGTAATAATGTCAGGGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR TCA 72 bp | CCCACATATAGGCAAAAGCTTTTTGTTCCAGTTGTTTaGGACACACATGGACACAAAGCTGACCATCTGCTA | + |
Preference number: 3 (lower is better) Translates to: PTYRQKLFVPVV*DTHGHKADHLL Trigger: TAGCAGATGGTCAGCTTTGTGTCCATGTGTGTCTCAAACAACTGGAACAAAAAGCTTTTGCCTATATGTGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR TCA 72 bp | GCCAAGGGAGTTGTACCACTTGAAGGTGTGGCATTGTaGAGAAAATGTGTCAGTATGGACATAGGCTTTAAA | + |
Preference number: 3 (lower is better) Translates to: AKGVVPLEGVAL*RKCVSMDIGFK Trigger: TTTAAAGCCTATGTCCATACTGACACATTTTCTTCACAATGCCACACCTTCAAGTGGTACAACTCCCTTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
3UTR GCA 72 bp | CACAATTCTTCTCACATACAACATCATATTCGCCTCTaGATAAGTATGGGCACACTGGTTATCCTCCCATTC | + |
Preference number: 3 (lower is better) Translates to: HNSSHIQHHIRL*ISMGTLVILPF Trigger: GAATGGGAGGATAACCAGTGTGCCCATACTTATGCAGAGGCGAATATGATGTTGTATGTGAGAAGAATTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR GCA 72 bp | GAAGCCTTCACAAGATGTAGAATTTTCAGCTCCTGCTaGATCAAGTCTGATTGGATGATACCATGCTCTCAT | + |
Preference number: 3 (lower is better) Translates to: EAFTRCRIFSSC*IKSDWMIPCSH Trigger: ATGAGAGCATGGTATCATCCAATCAGACTTGATGCAGCAGGAGCTGAAAATTCTACATCTTGTGAAGGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
3UTR CCA 72 bp | ATGACTCTCTGGACACTTCACACACTGGTCTACATCTaGTCAGAAATAGAGGTGATCAAGAGATTAGGAGTT | + |
Preference number: 3 (lower is better) Translates to: MTLWTLHTLVYI*SEIEVIKRLGV Trigger: AACTCCTAATCTCTTGATCACCTCTATTTCTGACCAGATGTAGACCAGTGTGTGAAGTGTCCAGAGAGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
||
3UTR-3UTR CAA 90 bp | CAACTCCTTTTCTCAGGCAGGGACCCATGTATTTTCAGCCCAAACTCTATCCTTATAGGCAAAAGCTTTTaGTTCCAGTTGTTTGAGACA | + |
Preference number: 3 (lower is better) Translates to: QLLFSGRDPCIFSPNSILIGKSF*FQLFET Trigger: TGTCTCAAACAACTGGAACAAAAAGCTTTTGCCTAT...AAGGATAGAGTTTGGGCTGAAAATACATGGGTCCCTGCCTGAGAAAAGGAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR TCA 72 bp | AGTATCCCCATTCTCCTTCTACTGTATGGTAGTAGGTaGCTGTATCTTTGCGAGTCATTTTCTGTGGGTAAA | + |
Preference number: 3 (lower is better) Translates to: SIPILLLLYGSR*LYLCESFSVGK Trigger: TTTACCCACAGAAAATGACTCGCAAAGATACAGTCACCTACTACCATACAGTAGAAGGAGAATGGGGATACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR TCA 72 bp | AAGCCTATTGGGCCCAGAGAGTTGAAAGTACTAATTTaGATATGTTTGGCCAAGGGAGTTGTACCACTTGAA | + |
Preference number: 3 (lower is better) Translates to: KPIGPRELKVLI*ICLAKGVVPLE Trigger: TTCAAGTGGTACAACTCCCTTGGCCAAACATATTCAAATTAGTACTTTCAACTCTCTGGGCCCAATAGGCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
3UTR GCA 72 bp | TTGTTTGAGACACACATGGACACAAAGCTGACCATCTaGTACACATGTGCAATGAAGCCTAGGTTAAATGTA | + |
Preference number: 3 (lower is better) Translates to: LFETHMDTKLTI*YTCAMKPRLNV Trigger: TACATTTAACCTAGGCTTCATTGCACATGTGTAGCAGATGGTCAGCTTTGTGTCCATGTGTGTCTCAAACAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR CCA 72 bp | GTGTCCATGTTCAGTATGAGCATCTTGGTCAATGAATaGTGGATAAGTTGCCATCCATATTCCACAAAGAAG | + |
Preference number: 3 (lower is better) Translates to: VSMFSMSILVNE*WISCHPYSTKK Trigger: CTTCTTTGTGGAATATGGATGGCAACTTATCCACCATTCATTGACCAAGATGCTCATACTGAACATGGACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
||
3UTR-3UTR CAA 90 bp | TTCACCCCCTCCCACAATTCTTCTCACATACAACATCATATTCGCCTCTGCATAATAGGCAAAAGCTTTTaGTTCCAGTTGTTTGAGACA | + |
Preference number: 3 (lower is better) Translates to: FTPSHNSSHIQHHIRLCIIGKSF*FQLFET Trigger: TGTCTCAAACAACTGGAACAAAAAGCTTTTGCCTAT...TATGCAGAGGCGAATATGATGTTGTATGTGAGAAGAATTGTGGGAGGGGGTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR CAA 90 bp | TCTACTGGCTATTTAACTTTCAGTGTTCCCAATAGATATGGGAGTGTTTGTAACACAGCTGAGCCCTTGTaGCACAAAAGGATGATGTGT | + |
Preference number: 3 (lower is better) Translates to: STGYLTFSVPNRYGSVCNTAEPL*HKRMMC Trigger: ACACATCATCCTTTTGTGCAACAAGGGCTCAGCTGT...GTTACAAACACTCCCATATCTATTGGGAACACTGAAAGTTAAATAGCCAGTAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
||
3UTR-3UTR CAA 90 bp | AACAATCTACAGAACAAGATCCAGGACATCCAAGTTTACTCAGTCAAAGTGTTGGAAGACAGTCTTTCCTaGAAGCCTTCACAAGATGTA | + |
Preference number: 3 (lower is better) Translates to: NNLQNKIQDIQVYSVKVLEDSLS*KPSQDV Trigger: TACATCTTGTGAAGGCTTCAAGGAAAGACTGTCTTC...CAACACTTTGACTGAGTAAACTTGGATGTCCTGGATCTTGTTCTGTAGATTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
3UTR-3UTR CAA 90 bp | GTTCAAGAACAATCTACAGAACAAGATCCAGGACATCCAAGTTTACTCAGTCAATGTGGATCCCAGACATaGGAACAAGAAACTAGAACA | + |
Preference number: 3 (lower is better) Translates to: VQEQSTEQDPGHPSLLSQCGSQT*EQETRT Trigger: TGTTCTAGTTTCTTGTTCCAATGTCTGGGATCCACA...TTGACTGAGTAAACTTGGATGTCCTGGATCTTGTTCTGTAGATTGTTCTTGAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR GCA 72 bp | AGTATGAGCATCTTGGTCAATGAATGGTGGATAAGTTaGCATCCATATTCCACAAAGAAGAAGTTGGATCAG | + |
Preference number: 3 (lower is better) Translates to: SMSILVNEWWIS*HPYSTKKKLDQ Trigger: CTGATCCAACTTCTTCTTTGTGGAATATGGATGGCAACTTATCCACCATTCATTGACCAAGATGCTCATACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
||
3UTR CCA 72 bp | CATTTACTCATTCAGGAGACAGAACAATGCAGATCTTaGAGTTCAAGAACAATCTACAGAACAAGATCCAGG | + |
Preference number: 3 (lower is better) Translates to: HLLIQETEQCRS*SSRTIYRTRSR Trigger: CCTGGATCTTGTTCTGTAGATTGTTCTTGAACTCCAAGATCTGCATTGTTCTGTCTCCTGAATGAGTAAATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
3UTR-3UTR CAA 90 bp | CCACTAGATTCATGTCCAAAGACCAAAGTCTTTAAGTGCTCAGTTTCCTTTTTGTGCTTTACTGGATTTTaGTCAAACAACTCTACTGGC | + |
Preference number: 3 (lower is better) Translates to: PLDSCPKTKVFKCSVSFLCFTGF*SNNSTG Trigger: GCCAGTAGAGTTGTTTGACAAAAATCCAGTAAAGCA...CAAAAAGGAAACTGAGCACTTAAAGACTTTGGTCTTTGGACATGAATCTAGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR CAA 90 bp | CCATTCTCCTTCTACTGTATGGTAGTAGGTGACTGTATCTTTGCGAGTCATTTTCTAGCCCTCTCAATCTaGTTGACTATTTCAAAGTTT | + |
Preference number: 3 (lower is better) Translates to: PFSFYCMVVGDCIFASHFLALSI*LTISKF Trigger: AAACTTTGAAATAGTCAACAAGATTGAGAGGGCTAG...AAAATGACTCGCAAAGATACAGTCACCTACTACCATACAGTAGAAGGAGAATGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR-3UTR CAA 90 bp | TCTATGCATTTCTTAAAATCTACAATGCAAGGGATTCTTCAAGTAGGCCCAGATTGTTCCTCTCTGTATTaGCATAATGACTCTCTGGAC | + |
Preference number: 3 (lower is better) Translates to: SMHFLKSTMQGILQVGPDCSSLY*HNDSLD Trigger: GTCCAGAGAGTCATTATGCAAATACAGAGAGGAACA...ATCTGGGCCTACTTGAAGAATCCCTTGCATTGTAGATTTTAAGAAATGCATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR TCA 72 bp | TCCTTTAGTGATGAACAGCAATGTGGAAATGTAAGCTaGATAAATCCTTTCCTCCCCAACTTGATTCTTGGT | + |
Preference number: 3 (lower is better) Translates to: SFSDEQQCGNVS*INPFLPNLILG Trigger: ACCAAGAATCAAGTTGGGGAGGAAAGGATTTATTCAGCTTACATTTCCACATTGCTGTTCATCACTAAAGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR TCA 72 bp | ACAGACAAGCAGATTTCTGAGTTTAAGGCCATCGCGTaGCAGTGCAAGTTGCAAATTGAGAAAATCTTATAT | + |
Preference number: 3 (lower is better) Translates to: TDKQISEFKAIA*QCKLQIEKILY Trigger: ATATAAGATTTTCTCAATTTGCAACTTGCACTGTCACGCGATGGCCTTAAACTCAGAAATCTGCTTGTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR-3UTR CAA 90 bp | GGCCCTGACATTTTTCTATACTGGAGCATAGAACTTTCTCAGTTTCTTAATGGTGCCCTCTCAATCTTGTaGACTATTTCAAAGTTTACT | + |
Preference number: 3 (lower is better) Translates to: GPDIFLYWSIELSQFLNGALSIL*TISKFT Trigger: AGTAAACTTTGAAATAGTCAACAAGATTGAGAGGGC...ACCATTAAGAAACTGAGAAAGTTCTATGCTCCAGTATAGAAAAATGTCAGGGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR CAA 90 bp | CCACTAGATTCATGTCCAAAGACCAAAGTCTTTAAGTGCTCAGTTTCCTTTTTGCTAGCCCTCTCAATCTaGTTGACTATTTCAAAGTTT | + |
Preference number: 3 (lower is better) Translates to: PLDSCPKTKVFKCSVSFLLALSI*LTISKF Trigger: AAACTTTGAAATAGTCAACAAGATTGAGAGGGCTAG...CAAAAAGGAAACTGAGCACTTAAAGACTTTGGTCTTTGGACATGAATCTAGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR CAA 90 bp | AGATTTATGTGTGAATATGAACTTCACTCTTTAGAAGGTTTGGAGACTGTACTGGTTTTGGTTTTGGTTTaGGTTGGTGGTTCGTTCTCT | + |
Preference number: 3 (lower is better) Translates to: RFMCEYELHSLEGLETVLVLVLV*VGGSFS Trigger: AGAGAACGAACCACCAACCAAAACCAAAACCAAAAC...CAGTACAGTCTCCAAACCTTCTAAAGAGTGAAGTTCATATTCACACATAAATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR CAA 90 bp | AGATTTATGTGTGAATATGAACTTCACTCTTTAGAAGGTTTGGAGACTGTACTGAGCTTTTTGTTCCAGTaGTTTGAGACACACATGGAC | + |
Preference number: 3 (lower is better) Translates to: RFMCEYELHSLEGLETVLSFLFQ*FETHMD Trigger: GTCCATGTGTGTCTCAAACAACTGGAACAAAAAGCT...CAGTACAGTCTCCAAACCTTCTAAAGAGTGAAGTTCATATTCACACATAAATCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR-3UTR CAA 90 bp | GTTCAAGAACAATCTACAGAACAAGATCCAGGACATCCAAGTTTACTCAGTCAAAACATTGAAGTTGCCTaGGAAACTCCAAAATGTTCA | + |
Preference number: 3 (lower is better) Translates to: VQEQSTEQDPGHPSLLSQNIEVA*ETPKCS Trigger: TGAACATTTTGGAGTTTCCAAGGCAACTTCAATGTT...TTGACTGAGTAAACTTGGATGTCCTGGATCTTGTTCTGTAGATTGTTCTTGAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR TCA 72 bp | ATGTGTTATCTGCTGAGGAAACCTGATAATAAGGATTaGAACCAGCTGAGTAGAAAGAAGTTACAGTCAACA | + |
Preference number: 3 (lower is better) Translates to: MCYLLRKPDNKD*NQLSRKKLQST Trigger: TGTTGACTGTAACTTCTTTCTACTCAGCTGGTTTCAATCCTTATTATCAGGTTTCCTCAGCAGATAACACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR CCA 72 bp | GTCCACATTGAAATCAGCATGTATATATTGCTGCTCTaGTTCAGGTCATATTTAGAGAGTCATGTTGACAAT | + |
Preference number: 3 (lower is better) Translates to: VHIEISMYILLL*FRSYLESHVDN Trigger: ATTGTCAACATGACTCTCTAAATATGACCTGAACCAGAGCAGCAATATATACATGCTGATTTCAATGTGGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR CCA 72 bp | TTGTTATTATATAAAATTGATATTACTGGGCAGTCCTaGTACATGCCTTTAATCCCATCACTTGGTAGGCAG | + |
Preference number: 3 (lower is better) Translates to: LLLYKIDITGQS*YMPLIPSLGRQ Trigger: CTGCCTACCAAGTGATGGGATTAAAGGCATGTACCAGGACTGCCCAGTAATATCAATTTTATATAATAACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR CCA 72 bp | TGTAGAATTTTCAGCTCCTGCTGCATCAAGTCTGATTaGATGATACCATGCTCTCATATTTATGATAATGGA | + |
Preference number: 3 (lower is better) Translates to: CRIFSSCCIKSD*MIPCSHIYDNG Trigger: TCCATTATCATAAATATGAGAGCATGGTATCATCCAATCAGACTTGATGCAGCAGGAGCTGAAAATTCTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR TCA 72 bp | ACATTTATGAATATAGAGTCATACTTTACCAATGCATaGCAGCCCATTTGTGCACATAGTGAAGAAAGGTTG | + |
Preference number: 3 (lower is better) Translates to: TFMNIESYFTNA*QPICAHSEERL Trigger: CAACCTTTCTTCACTATGTGCACAAATGGGCTGTCATGCATTGGTAAAGTATGACTCTATATTCATAAATGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR GCA 90 bp | TGGTACCATCTCTGGGATTCTATACGAAAGCAAGCTGAGCAAGCCAGTGAAAGCAGCAGCAGATGGCCTTaGCCTCCTGGCTTACTTTCC | + |
Preference number: 4 (lower is better) Translates to: WYHLWDSIRKQAEQASESSSRWP*PPGLLS Trigger: GGAAAGTAAGCCAGGAGGGCAAGGCCATCTGCTGCT...GCTTTCACTGGCTTGCTCAGCTTGCTTTCGTATAGAATCCCAGAGATGGTACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS-3UTR GCA 90 bp | AGAGTACAAAGAAACTGTGTTCCAGAGATAGCCAGGGTTGGACCTAGAGCTCCAAGCAGCAGATGGCCTTaGCCTCCTGGCTTACTTTCC | + |
Preference number: 4 (lower is better) Translates to: RVQRNCVPEIARVGPRAPSSRWP*PPGLLS Trigger: GGAAAGTAAGCCAGGAGGGCAAGGCCATCTGCTGCT...TGGAGCTCTAGGTCCAACCCTGGCTATCTCTGGAACACAGTTTCTTTGTACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR CCA 90 bp | CCAGAGATAGCCAGGGTTGGACCTAGAGCTCCAGGTGTACTTGGTGTTAGAGTCGATAAGGACAACTGTTaGCCTTGGGGAGCATTTGCA | + |
Preference number: 4 (lower is better) Translates to: PEIARVGPRAPGVLGVRVDKDNC*PWGAFA Trigger: TGCAAATGCTCCCCAAGGCCAACAGTTGTCCTTATC...GACTCTAACACCAAGTACACCTGGAGCTCTAGGTCCAACCCTGGCTATCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR CCA 90 bp | TGGTACCATCTCTGGGATTCTATACGAAAGCAAGCTGAGCAAGCCAGTGAAAGCAGCACAAAGCTATGCTaGCAAGAGCCATCCCCAGGG | + |
Preference number: 4 (lower is better) Translates to: WYHLWDSIRKQAEQASESSTKLC*QEPSPG Trigger: CCCTGGGGATGGCTCTTGCCAGCATAGCTTTGTGCT...GCTTTCACTGGCTTGCTCAGCTTGCTTTCGTATAGAATCCCAGAGATGGTACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS-3UTR GCA 90 bp | GTGGGTAAACCTTCAGAGCCACCACAGAGGGATGGGGAGTGGAAAGAGGAGTTCGGCCATTGTATCATCTaGTCAGATAAGGACAACTGT | + |
Preference number: 4 (lower is better) Translates to: VGKPSEPPQRDGEWKEEFGHCII*SDKDNC Trigger: ACAGTTGTCCTTATCTGAGCAGATGATACAATGGCC...GAACTCCTCTTTCCACTCCCCATCCCTCTGTGGTGGCTCTGAAGGTTTACCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR GCA 90 bp | ATAGCCAGGGTTGGACCTAGAGCTCCAGGTGTACTTGGTGTTAGAGTCACCCATTCTCTGCACAAGGAGTaGAATTGTAGCAGCAGATGG | + |
Preference number: 4 (lower is better) Translates to: IARVGPRAPGVLGVRVTHSLHKE*NCSSRW Trigger: CCATCTGCTGCTACAATTGCACTCCTTGTGCAGAGA...ATGGGTGACTCTAACACCAAGTACACCTGGAGCTCTAGGTCCAACCCTGGCTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR TCA 90 bp | TGGAGAGCAGCTGAGGCTTGGCACTATGAGAAGCCATGGAATACCATTGTTGGGTACCCCCTTCAACACTaGAGGGACTTTCAGAAACAT | + |
Preference number: 4 (lower is better) Translates to: WRAAEAWHYEKPWNTIVGYPLQH*RDFQKH Trigger: ATGTTTCTGAAAGTCCCTTCAGTGTTGAAGGGGGTA...CCCAACAATGGTATTCCATGGCTTCTCATAGTGCCAAGCCTCAGCTGCTCTCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR CCA 90 bp | GTGGGTAAACCTTCAGAGCCACCACAGAGGGATGGGGAGTGGAAAGAGGAGTTCAAGCAGAGACAAGTTTaGGAATTTGCAATAGCCAGA | + |
Preference number: 4 (lower is better) Translates to: VGKPSEPPQRDGEWKEEFKQRQV*EFAIAR Trigger: TCTGGCTATTGCAAATTCCCAAACTTGTCTCTGCTT...GAACTCCTCTTTCCACTCCCCATCCCTCTGTGGTGGCTCTGAAGGTTTACCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR CCA 90 bp | AGAGTACAAAGAAACTGTGTTCCAGAGATAGCCAGGGTTGGACCTAGAGCTCCAATGGCCTTGCCCTCCTaGCTTACTTTCCTGAATCCA | + |
Preference number: 4 (lower is better) Translates to: RVQRNCVPEIARVGPRAPMALPS*LTFLNP Trigger: TGGATTCAGGAAAGTAAGCCAGGAGGGCAAGGCCAT...TGGAGCTCTAGGTCCAACCCTGGCTATCTCTGGAACACAGTTTCTTTGTACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR TCA 90 bp | GTGGGTAAACCTTCAGAGCCACCACAGAGGGATGGGGAGTGGAAAGAGGAGTTCAAATCTCCTTCATGGTaGAACTCTTCAGTGATTATG | + |
Preference number: 4 (lower is better) Translates to: VGKPSEPPQRDGEWKEEFKSPSW*NSSVIM Trigger: CATAATCACTGAAGAGTTTCACCATGAAGGAGATTT...GAACTCCTCTTTCCACTCCCCATCCCTCTGTGGTGGCTCTGAAGGTTTACCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR TCA 90 bp | ATAGCCAGGGTTGGACCTAGAGCTCCAGGTGTACTTGGTGTTAGAGTCACCCATAGATTGAGGGATCTCTaGAAATATTGCTGGCCATTG | + |
Preference number: 4 (lower is better) Translates to: IARVGPRAPGVLGVRVTHRLRDL*KYCWPL Trigger: CAATGGCCAGCAATATTTTCAGAGATCCCTCAATCT...ATGGGTGACTCTAACACCAAGTACACCTGGAGCTCTAGGTCCAACCCTGGCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR TCA 90 bp | TTCACCCCCTCCCACAATTCTTCTCACATACAACATCATATTCGCCTCTGCATAGAAGGCAAGGAGTGCTaGGCTGGAAGCCAAGATAGA | + |
Preference number: 4 (lower is better) Translates to: FTPSHNSSHIQHHIRLCIEGKEC*AGSQDR Trigger: TCTATCTTGGCTTCCAGCTCAGCACTCCTTGCCTTC...TATGCAGAGGCGAATATGATGTTGTATGTGAGAAGAATTGTGGGAGGGGGTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS-3UTR TCA 90 bp | ATAGCCAGGGTTGGACCTAGAGCTCCAGGTGTACTTGGTGTTAGAGTCACCCATTGCAGCTGTCTCATTTaGAATCTCATTCTCTGCACA | + |
Preference number: 4 (lower is better) Translates to: IARVGPRAPGVLGVRVTHCSCLI*NLILCT Trigger: TGTGCAGAGAATGAGATTTCAAATGAGACAGCTGCA...ATGGGTGACTCTAACACCAAGTACACCTGGAGCTCTAGGTCCAACCCTGGCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR GCA 90 bp | ATAGCCAGGGTTGGACCTAGAGCTCCAGGTGTACTTGGTGTTAGAGTCACCCATGGCCATTGTATCATCTaGTCAGATAAGGACAACTGT | + |
Preference number: 4 (lower is better) Translates to: IARVGPRAPGVLGVRVTHGHCII*SDKDNC Trigger: ACAGTTGTCCTTATCTGAGCAGATGATACAATGGCC...ATGGGTGACTCTAACACCAAGTACACCTGGAGCTCTAGGTCCAACCCTGGCTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR CCA 90 bp | CAACTCCTTTTCTCAGGCAGGGACCCATGTATTTTCAGCCCAAACTCTATCCTTATGGCCTTGCCCTCCTaGCTTACTTTCCTGAATCCA | + |
Preference number: 4 (lower is better) Translates to: QLLFSGRDPCIFSPNSILMALPS*LTFLNP Trigger: TGGATTCAGGAAAGTAAGCCAGGAGGGCAAGGCCAT...AAGGATAGAGTTTGGGCTGAAAATACATGGGTCCCTGCCTGAGAAAAGGAGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS-3UTR TCA 90 bp | TGGAGAGCAGCTGAGGCTTGGCACTATGAGAAGCCATGGAATACCATTGTTGGGAAATCTCCTTCATGGTaGAACTCTTCAGTGATTATG | + |
Preference number: 4 (lower is better) Translates to: WRAAEAWHYEKPWNTIVGKSPSW*NSSVIM Trigger: CATAATCACTGAAGAGTTTCACCATGAAGGAGATTT...CCCAACAATGGTATTCCATGGCTTCTCATAGTGCCAAGCCTCAGCTGCTCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR TCA 90 bp | TCCCCATTCTCCTTCTACTGTATGGTAGTAGGTGACTGTATCTTTGCGAGTCATGGTGTTCAGTGTTCATaGCCCAGACAATCCATGTCA | + |
Preference number: 4 (lower is better) Translates to: SPFSFYCMVVGDCIFASHGVQCS*PRQSMS Trigger: TGACATGGATTGTCTGGGTCATGAACACTGAACACC...ATGACTCGCAAAGATACAGTCACCTACTACCATACAGTAGAAGGAGAATGGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR TCA 90 bp | TTCACCCCCTCCCACAATTCTTCTCACATACAACATCATATTCGCCTCTGCATAACTTTGGACCAAATATaGAGGCAAGGAGTGCTGAGC | + |
Preference number: 4 (lower is better) Translates to: FTPSHNSSHIQHHIRLCITLDQI*RQGVLS Trigger: GCTCAGCACTCCTTGCCTTCATATTTGGTCCAAAGT...TATGCAGAGGCGAATATGATGTTGTATGTGAGAAGAATTGTGGGAGGGGGTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS-3UTR CCA 90 bp | TCTTCTCACATACAACATCATATTCGCCTCTGCATAAGTATGGGCACACTGGTTAAGCAACTGCAAAGGTaGTCTGCTGAAGGATGCAGG | + |
Preference number: 4 (lower is better) Translates to: SSHIQHHIRLCISMGTLVKQLQR*SAEGCR Trigger: CCTGCATCCTTCAGCAGACCACCTTTGCAGTTGCTT...AACCAGTGTGCCCATACTTATGCAGAGGCGAATATGATGTTGTATGTGAGAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS-3UTR TCA 90 bp | CAACTCCTTTTCTCAGGCAGGGACCCATGTATTTTCAGCCCAAACTCTATCCTTAGATTGAGGGATCTCTaGAAATATTGCTGGCCATTG | + |
Preference number: 4 (lower is better) Translates to: QLLFSGRDPCIFSPNSILRLRDL*KYCWPL Trigger: CAATGGCCAGCAATATTTTCAGAGATCCCTCAATCT...AAGGATAGAGTTTGGGCTGAAAATACATGGGTCCCTGCCTGAGAAAAGGAGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS-3UTR GCA 90 bp | TTCACCCCCTCCCACAATTCTTCTCACATACAACATCATATTCGCCTCTGCATAGCCTTGGGGAGCATTTaGAGAAAAGGATCCTACTTT | + |
Preference number: 4 (lower is better) Translates to: FTPSHNSSHIQHHIRLCIALGSI*RKGSYF Trigger: AAAGTAGGATCCTTTTCTGCAAATGCTCCCCAAGGC...TATGCAGAGGCGAATATGATGTTGTATGTGAGAAGAATTGTGGGAGGGGGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
CDS-3UTR GCA 90 bp | GATATGGAACATAATGAGGCCAACTCCTTTTCTCAGGCAGGGACCCATGTATTTCATAGTGAAAGCAACTaGAAAGGTGGTCTGCTGAAG | + |
Preference number: 4 (lower is better) Translates to: DMEHNEANSFSQAGTHVFHSESN*KGGLLK Trigger: CTTCAGCAGACCACCTTTGCAGTTGCTTTCACTATG...AAATACATGGGTCCCTGCCTGAGAAAAGGAGTTGGCCTCATTATGTTCCATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS-3UTR GCA 90 bp | TGGTACCATCTCTGGGATTCTATACGAAAGCAAGCTGAGCAAGCCAGTGAAAGCGAATGGTGGATAAGTTaGCATCCATATTCCACAAAG | + |
Preference number: 4 (lower is better) Translates to: WYHLWDSIRKQAEQASESEWWIS*HPYSTK Trigger: CTTTGTGGAATATGGATGGCAACTTATCCACCATTC...GCTTTCACTGGCTTGCTCAGCTTGCTTTCGTATAGAATCCCAGAGATGGTACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
||
CDS-3UTR CCA 90 bp | TATTGGGCCCAGAGAGTTGAAAGTACTAATTTGAATATGTTTGGCCAAGGGAGTAATTGTAGCAGCAGATaGCCTTGCCCTCCTGGCTTA | + |
Preference number: 4 (lower is better) Translates to: YWAQRVESTNLNMFGQGSNCSSR*PCPPGL Trigger: TAAGCCAGGAGGGCAAGGCCATCTGCTGCTACAATT...ACTCCCTTGGCCAAACATATTCAAATTAGTACTTTCAACTCTCTGGGCCCAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR CCA 90 bp | CAACTCCTTTTCTCAGGCAGGGACCCATGTATTTTCAGCCCAAACTCTATCCTTAAGCTCACAGATTTTTaGAGGCAGTTGTTCCTCTCT | + |
Preference number: 4 (lower is better) Translates to: QLLFSGRDPCIFSPNSILKLTDF*RQLFLS Trigger: AGAGAGGAACAACTGCCTCCAAAAATCTGTGAGCTT...AAGGATAGAGTTTGGGCTGAAAATACATGGGTCCCTGCCTGAGAAAAGGAGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
||
3UTR CAA 72 bp | GAATACCCTGACATTATTACTGATACAACTTTGTGCTaGAAGGGAGCCCACACTTCTTGGTCTGAACCCCAA | + |
Preference number: 4 (lower is better) Translates to: EYPDIITDTTLC*KGAHTSWSEPQ Trigger: TTGGGGTTCAGACCAAGAAGTGTGGGCTCCCTTCAAGCACAAAGTTGTATCAGTAATAATGTCAGGGTATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR CAA 72 bp | CAGGCAGAATACCCTGACATTATTACTGATACAACTTaGTGCTTGAAGGGAGCCCACACTTCTTGGTCTGAA | + |
Preference number: 4 (lower is better) Translates to: QAEYPDIITDTT*CLKGAHTSWSE Trigger: TTCAGACCAAGAAGTGTGGGCTCCCTTCAAGCACAAAGTTGTATCAGTAATAATGTCAGGGTATTCTGCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR CAA 72 bp | AAACTGACCTTAAAGGCAAGAACCACAGTAATAGCTTaGGCCAACACAGTGGCAAGAGCCATAGTGAAAGCA | + |
Preference number: 4 (lower is better) Translates to: KLTLKARTTVIA*ANTVARAIVKA Trigger: TGCTTTCACTATGGCTCTTGCCACTGTGTTGGCCAAAGCTATTACTGTGGTTCTTGCCTTTAAGGTCAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
||
3UTR CAA 72 bp | AACCCTTGTCCTACCTGCCTAGAAGACAGTCTTTCCTaGAAGCCTTCACAAGATGTAGAATTTTCAGCTCCT | + |
Preference number: 4 (lower is better) Translates to: NPCPTCLEDSLS*KPSQDVEFSAP Trigger: AGGAGCTGAAAATTCTACATCTTGTGAAGGCTTCAAGGAAAGACTGTCTTCTAGGCAGGTAGGACAAGGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
CDS-3UTR TCA 90 bp | AATCTTCAAGCTAGGATGGAAGCTTGCATGTCCCAACTGATGGATTATCAACTTTGTGCACATGAGAGGTaGGCCAAATACCAGCATTCA | + |
Preference number: 4 (lower is better) Translates to: NLQARMEACMSQLMDYQLCAHER*AKYQHS Trigger: TGAATGCTGGTATTTGGCTCACCTCTCATGTGCACA...AAGTTGATAATCCATCAGTTGGGACATGCAAGCTTCCATCCTAGCTTGAAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
CDS-3UTR TCA 90 bp | TATTGGGCCCAGAGAGTTGAAAGTACTAATTTGAATATGTTTGGCCAAGGGAGTTGTGCACATGAGAGGTaGGCCAAATACCAGCATTCA | + |
Preference number: 4 (lower is better) Translates to: YWAQRVESTNLNMFGQGSCAHER*AKYQHS Trigger: TGAATGCTGGTATTTGGCTCACCTCTCATGTGCACA...ACTCCCTTGGCCAAACATATTCAAATTAGTACTTTCAACTCTCTGGGCCCAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
CDS-3UTR TCA 90 bp | TGGTACCATCTCTGGGATTCTATACGAAAGCAAGCTGAGCAAGCCAGTGAAAGCTACATCTGTCTCATTTaGAATCTCATTCTCTGCACA | + |
Preference number: 4 (lower is better) Translates to: WYHLWDSIRKQAEQASESYICLI*NLILCT Trigger: TGTGCAGAGAATGAGATTTCAAATGAGACAGATGTA...GCTTTCACTGGCTTGCTCAGCTTGCTTTCGTATAGAATCCCAGAGATGGTACCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
||
CDS-3UTR TCA 90 bp | TCTATGCATTTCTTAAAATCTACAATGCAAGGGATTCTTCAAGTAGGCCCAGATGCAAAGGTGGTCTGCTaGAGGATGCAGGCTGATGTA | + |
Preference number: 4 (lower is better) Translates to: SMHFLKSTMQGILQVGPDAKVVC*RMQADV Trigger: TACATCAGCCTGCATCCTTCAGCAGACCACCTTTGC...ATCTGGGCCTACTTGAAGAATCCCTTGCATTGTAGATTTTAAGAAATGCATAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
||
CDS-3UTR TCA 90 bp | CAACTCCTTTTCTCAGGCAGGGACCCATGTATTTTCAGCCCAAACTCTATCCTTTGTCCATGTTCAGTATaGGCATCTTGGTCAATGAAT | + |
Preference number: 4 (lower is better) Translates to: QLLFSGRDPCIFSPNSILCPCSV*ASWSMN Trigger: ATTCATTGACCAAGATGCTCATACTGAACATGGACA...AAGGATAGAGTTTGGGCTGAAAATACATGGGTCCCTGCCTGAGAAAAGGAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
||
CDS-3UTR GCA 90 bp | TTCACCCCCTCCCACAATTCTTCTCACATACAACATCATATTCGCCTCTGCATATCCTCAATGGCAAATTaGAGAGCCAGAATATACTGG | + |
Preference number: 4 (lower is better) Translates to: FTPSHNSSHIQHHIRLCISSMAN*RARIYW Trigger: CCAGTATATTCTGGCTCTGCAATTTGCCATTGAGGA...TATGCAGAGGCGAATATGATGTTGTATGTGAGAAGAATTGTGGGAGGGGGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
CDS-3UTR GCA 90 bp | TTCACCCCCTCCCACAATTCTTCTCACATACAACATCATATTCGCCTCTGCATAGGCCATTGTATCATCTaGTCAGATAAGGACAACTGT | + |
Preference number: 4 (lower is better) Translates to: FTPSHNSSHIQHHIRLCIGHCII*SDKDNC Trigger: ACAGTTGTCCTTATCTGAGCAGATGATACAATGGCC...TATGCAGAGGCGAATATGATGTTGTATGTGAGAAGAATTGTGGGAGGGGGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
CDS-3UTR CCA 90 bp | CAACTCCTTTTCTCAGGCAGGGACCCATGTATTTTCAGCCCAAACTCTATCCTTAAGCAGAGACAAGTTTaGGAATTTGCAATAGCCAGA | + |
Preference number: 4 (lower is better) Translates to: QLLFSGRDPCIFSPNSILKQRQV*EFAIAR Trigger: TCTGGCTATTGCAAATTCCCAAACTTGTCTCTGCTT...AAGGATAGAGTTTGGGCTGAAAATACATGGGTCCCTGCCTGAGAAAAGGAGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
CDS-3UTR CCA 90 bp | TCCCCATTCTCCTTCTACTGTATGGTAGTAGGTGACTGTATCTTTGCGAGTCATACCCAAGAGATATGTTaGGTAAAAGATTGGGGTTCC | + |
Preference number: 4 (lower is better) Translates to: SPFSFYCMVVGDCIFASHTQEIC*VKDWGS Trigger: GGAACCCCAATCTTTTACCCAACATATCTCTTGGGT...ATGACTCGCAAAGATACAGTCACCTACTACCATACAGTAGAAGGAGAATGGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
CDS-3UTR CCA 90 bp | GATATGGAACATAATGAGGCCAACTCCTTTTCTCAGGCAGGGACCCATGTATTTAGTAATGTCCCAATTTaGGCAGATGCCATCCATGAT | + |
Preference number: 4 (lower is better) Translates to: DMEHNEANSFSQAGTHVFSNVPI*ADAIHD Trigger: ATCATGGATGGCATCTGCCCAAATTGGGACATTACT...AAATACATGGGTCCCTGCCTGAGAAAAGGAGTTGGCCTCATTATGTTCCATATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
CDS-3UTR CCA 90 bp | AGAGTACAAAGAAACTGTGTTCCAGAGATAGCCAGGGTTGGACCTAGAGCTCCAAGTATGAAGTCCATGTaGCTGGGATCATTTTTACAA | + |
Preference number: 4 (lower is better) Translates to: RVQRNCVPEIARVGPRAPSMKSM*LGSFLQ Trigger: TTGTAAAAATGATCCCAGCCACATGGACTTCATACT...TGGAGCTCTAGGTCCAACCCTGGCTATCTCTGGAACACAGTTTCTTTGTACTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
CDS-3UTR CCA 90 bp | CCACTAGATTCATGTCCAAAGACCAAAGTCTTTAAGTGCTCAGTTTCCTTTTTGAATTGTAGCAGCAGATaGCCTTGCCCTCCTGGCTTA | + |
Preference number: 4 (lower is better) Translates to: PLDSCPKTKVFKCSVSFLNCSSR*PCPPGL Trigger: TAAGCCAGGAGGGCAAGGCCATCTGCTGCTACAATT...CAAAAAGGAAACTGAGCACTTAAAGACTTTGGTCTTTGGACATGAATCTAGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
||
CDS-3UTR TCA 90 bp | AGCAGAAAAGGCAGTATATATAGTAAATTCCTGGGGAAGTTTAGGAAAGTGCACGGTGTTCAGTGTTCATaGCCCAGACAATCCATGTCA | + |
Preference number: 4 (lower is better) Translates to: SRKGSIYSKFLGKFRKVHGVQCS*PRQSMS Trigger: TGACATGGATTGTCTGGGTCATGAACACTGAACACC...GTGCACTTTCCTAAACTTCCCCAGGAATTTACTATATATACTGCCTTTTCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
CDS-3UTR TCA 90 bp | GTTCAAGAACAATCTACAGAACAAGATCCAGGACATCCAAGTTTACTCAGTCAAGGTGTTCAGTGTTCATaGCCCAGACAATCCATGTCA | + |
Preference number: 4 (lower is better) Translates to: VQEQSTEQDPGHPSLLSQGVQCS*PRQSMS Trigger: TGACATGGATTGTCTGGGTCATGAACACTGAACACC...TTGACTGAGTAAACTTGGATGTCCTGGATCTTGTTCTGTAGATTGTTCTTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
CDS-3UTR TCA 90 bp | AATCTTCAAGCTAGGATGGAAGCTTGCATGTCCCAACTGATGGATTATCAACTTTTCCTGAATCCAGACTaGCAACTCTCACTACACACA | + |
Preference number: 4 (lower is better) Translates to: NLQARMEACMSQLMDYQLFLNPD*QLSLHT Trigger: TGTGTGTAGTGAGAGTTGTCAGTCTGGATTCAGGAA...AAGTTGATAATCCATCAGTTGGGACATGCAAGCTTCCATCCTAGCTTGAAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
||
CDS-3UTR TCA 90 bp | CCACTAGATTCATGTCCAAAGACCAAAGTCTTTAAGTGCTCAGTTTCCTTTTTGCCTGGCTTACTTTCCTaGATCCAGACTGACAACTCT | + |
Preference number: 4 (lower is better) Translates to: PLDSCPKTKVFKCSVSFLPGLLS*IQTDNS Trigger: AGAGTTGTCAGTCTGGATTCAGGAAAGTAAGCCAGG...CAAAAAGGAAACTGAGCACTTAAAGACTTTGGTCTTTGGACATGAATCTAGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
||
CDS-3UTR TCA 90 bp | AACAATCTACAGAACAAGATCCAGGACATCCAAGTTTACTCAGTCAAAGTGTTGCCTGGCTTACTTTCCTaGATCCAGACTGACAACTCT | + |
Preference number: 4 (lower is better) Translates to: NNLQNKIQDIQVYSVKVLPGLLS*IQTDNS Trigger: AGAGTTGTCAGTCTGGATTCAGGAAAGTAAGCCAGG...CAACACTTTGACTGAGTAAACTTGGATGTCCTGGATCTTGTTCTGTAGATTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
CDS-3UTR GCA 90 bp | AAATGTGTCAGTATGGACATAGGCTTTAAACCCTTGTCCTACCTGCCTAGAAGATCCTCAATGGCAAATTaGAGAGCCAGAATATACTGG | + |
Preference number: 4 (lower is better) Translates to: KCVSMDIGFKPLSYLPRRSSMAN*RARIYW Trigger: CCAGTATATTCTGGCTCTGCAATTTGCCATTGAGGA...TCTTCTAGGCAGGTAGGACAAGGGTTTAAAGCCTATGTCCATACTGACACATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
CDS-3UTR GCA 90 bp | AGCAGAAAAGGCAGTATATATAGTAAATTCCTGGGGAAGTTTAGGAAAGTGCACTCTCTGCACAAGGAGTaGAATTGTAGCAGCAGATGG | + |
Preference number: 4 (lower is better) Translates to: SRKGSIYSKFLGKFRKVHSLHKE*NCSSRW Trigger: CCATCTGCTGCTACAATTGCACTCCTTGTGCAGAGA...GTGCACTTTCCTAAACTTCCCCAGGAATTTACTATATATACTGCCTTTTCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS-3UTR CCA 90 bp | TCTTCTCACATACAACATCATATTCGCCTCTGCATAAGTATGGGCACACTGGTTAGTAATGTCCCAATTTaGGCAGATGCCATCCATGAT | + |
Preference number: 4 (lower is better) Translates to: SSHIQHHIRLCISMGTLVSNVPI*ADAIHD Trigger: ATCATGGATGGCATCTGCCCAAATTGGGACATTACT...AACCAGTGTGCCCATACTTATGCAGAGGCGAATATGATGTTGTATGTGAGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR CCA 90 bp | AAATGTGTCAGTATGGACATAGGCTTTAAACCCTTGTCCTACCTGCCTAGAAGAAGTAATGTCCCAATTTaGGCAGATGCCATCCATGAT | + |
Preference number: 4 (lower is better) Translates to: KCVSMDIGFKPLSYLPRRSNVPI*ADAIHD Trigger: ATCATGGATGGCATCTGCCCAAATTGGGACATTACT...TCTTCTAGGCAGGTAGGACAAGGGTTTAAAGCCTATGTCCATACTGACACATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR CCA 90 bp | GGCCCTGACATTTTTCTATACTGGAGCATAGAACTTTCTCAGTTTCTTAATGGTGATAAGGACAACTGTTaGCCTTGGGGAGCATTTGCA | + |
Preference number: 4 (lower is better) Translates to: GPDIFLYWSIELSQFLNGDKDNC*PWGAFA Trigger: TGCAAATGCTCCCCAAGGCCAACAGTTGTCCTTATC...ACCATTAAGAAACTGAGAAAGTTCTATGCTCCAGTATAGAAAAATGTCAGGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR CAA 72 bp | CATATCCCACATATAGGCAAAAGCTTTTTGTTCCAGTaGTTTGAGACACACATGGACACAAAGCTGACCATC | + |
Preference number: 4 (lower is better) Translates to: HIPHIGKSFLFQ*FETHMDTKLTI Trigger: GATGGTCAGCTTTGTGTCCATGTGTGTCTCAAACAACTGGAACAAAAAGCTTTTGCCTATATGTGGGATATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR CAA 72 bp | AGAAAATGTGTCAGTATGGACATAGGCTTTAAACCCTaGTCCTACCTGCCTAGAAGACAGTCTTTCCTTGAA | + |
Preference number: 4 (lower is better) Translates to: RKCVSMDIGFKP*SYLPRRQSFLE Trigger: TTCAAGGAAAGACTGTCTTCTAGGCAGGTAGGACAAGGGTTTAAAGCCTATGTCCATACTGACACATTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR TCA 90 bp | GTTCAAGAACAATCTACAGAACAAGATCCAGGACATCCAAGTTTACTCAGTCAATTCCTGAATCCAGACTaGCAACTCTCACTACACACA | + |
Preference number: 4 (lower is better) Translates to: VQEQSTEQDPGHPSLLSQFLNPD*QLSLHT Trigger: TGTGTGTAGTGAGAGTTGTCAGTCTGGATTCAGGAA...TTGACTGAGTAAACTTGGATGTCCTGGATCTTGTTCTGTAGATTGTTCTTGAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR CCA 90 bp | TTCACCCCCTCCCACAATTCTTCTCACATACAACATCATATTCGCCTCTGCATAGAAATTTCAAGAACATaGTGTTCAGTGTTCATGACC | + |
Preference number: 4 (lower is better) Translates to: FTPSHNSSHIQHHIRLCIEISRT*CSVFMT Trigger: GGTCATGAACACTGAACACCATGTTCTTGAAATTTC...TATGCAGAGGCGAATATGATGTTGTATGTGAGAAGAATTGTGGGAGGGGGTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR CCA 90 bp | GGCCCTGACATTTTTCTATACTGGAGCATAGAACTTTCTCAGTTTCTTAATGGTTGCATAATGACTCTCTaGACACTTCACACACTGGTC | + |
Preference number: 4 (lower is better) Translates to: GPDIFLYWSIELSQFLNGCIMTL*TLHTLV Trigger: GACCAGTGTGTGAAGTGTCCAGAGAGTCATTATGCA...ACCATTAAGAAACTGAGAAAGTTCTATGCTCCAGTATAGAAAAATGTCAGGGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS-3UTR GCA 90 bp | CCACTAGATTCATGTCCAAAGACCAAAGTCTTTAAGTGCTCAGTTTCCTTTTTGTCCTCAATGGCAAATTaGAGAGCCAGAATATACTGG | + |
Preference number: 4 (lower is better) Translates to: PLDSCPKTKVFKCSVSFLSSMAN*RARIYW Trigger: CCAGTATATTCTGGCTCTGCAATTTGCCATTGAGGA...CAAAAAGGAAACTGAGCACTTAAAGACTTTGGTCTTTGGACATGAATCTAGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR GCA 90 bp | TCTATGCATTTCTTAAAATCTACAATGCAAGGGATTCTTCAAGTAGGCCCAGATGCCTTGGGGAGCATTTaGAGAAAAGGATCCTACTTT | + |
Preference number: 4 (lower is better) Translates to: SMHFLKSTMQGILQVGPDALGSI*RKGSYF Trigger: AAAGTAGGATCCTTTTCTGCAAATGCTCCCCAAGGC...ATCTGGGCCTACTTGAAGAATCCCTTGCATTGTAGATTTTAAGAAATGCATAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR GCA 90 bp | AGATTTATGTGTGAATATGAACTTCACTCTTTAGAAGGTTTGGAGACTGTACTGTGGTCTGCTGAAGGATaGAGGCTGATGTATTTGGCT | + |
Preference number: 4 (lower is better) Translates to: RFMCEYELHSLEGLETVLWSAEG*RLMYLA Trigger: AGCCAAATACATCAGCCTGCATCCTTCAGCAGACCA...CAGTACAGTCTCCAAACCTTCTAAAGAGTGAAGTTCATATTCACACATAAATCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS-3UTR CCA 90 bp | TGTGATGAGCAAAATGAAACTCAGACCTTGATTATTGGCCTTGACAATAGGAGTACCCAAGAGATATGTTaGGTAAAAGATTGGGGTTCC | + |
Preference number: 4 (lower is better) Translates to: CDEQNETQTLIIGLDNRSTQEIC*VKDWGS Trigger: GGAACCCCAATCTTTTACCCAACATATCTCTTGGGT...ACTCCTATTGTCAAGGCCAATAATCAAGGTCTGAGTTTCATTTTGCTCATCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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CDS-3UTR CCA 90 bp | AATCTTCAAGCTAGGATGGAAGCTTGCATGTCCCAACTGATGGATTATCAACTTATTTTATTTCCCTTGTaGTCATCTGGGAGGATGAGA | + |
Preference number: 4 (lower is better) Translates to: NLQARMEACMSQLMDYQLILFPL*SSGRMR Trigger: TCTCATCCTCCCAGATGACCACAAGGGAAATAAAAT...AAGTTGATAATCCATCAGTTGGGACATGCAAGCTTCCATCCTAGCTTGAAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR CCA 90 bp | TATTGGGCCCAGAGAGTTGAAAGTACTAATTTGAATATGTTTGGCCAAGGGAGTATTTTATTTCCCTTGTaGTCATCTGGGAGGATGAGA | + |
Preference number: 4 (lower is better) Translates to: YWAQRVESTNLNMFGQGSILFPL*SSGRMR Trigger: TCTCATCCTCCCAGATGACCACAAGGGAAATAAAAT...ACTCCCTTGGCCAAACATATTCAAATTAGTACTTTCAACTCTCTGGGCCCAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR CCA 90 bp | TCTTCTCACATACAACATCATATTCGCCTCTGCATAAGTATGGGCACACTGGTTAGTATGAAGTCCATGTaGCTGGGATCATTTTTACAA | + |
Preference number: 4 (lower is better) Translates to: SSHIQHHIRLCISMGTLVSMKSM*LGSFLQ Trigger: TTGTAAAAATGATCCCAGCCACATGGACTTCATACT...AACCAGTGTGCCCATACTTATGCAGAGGCGAATATGATGTTGTATGTGAGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR CCA 90 bp | AGATTTATGTGTGAATATGAACTTCACTCTTTAGAAGGTTTGGAGACTGTACTGGATAAGGACAACTGTTaGCCTTGGGGAGCATTTGCA | + |
Preference number: 4 (lower is better) Translates to: RFMCEYELHSLEGLETVLDKDNC*PWGAFA Trigger: TGCAAATGCTCCCCAAGGCCAACAGTTGTCCTTATC...CAGTACAGTCTCCAAACCTTCTAAAGAGTGAAGTTCATATTCACACATAAATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR CCA 90 bp | TCTACTGGCTATTTAACTTTCAGTGTTCCCAATAGATATGGGAGTGTTTGTAACCCACAAAGAAGAAGTTaGATCAGGGTGCAGATAGGA | + |
Preference number: 4 (lower is better) Translates to: STGYLTFSVPNRYGSVCNPQRRS*IRVQIG Trigger: TCCTATCTGCACCCTGATCCAACTTCTTCTTTGTGG...GTTACAAACACTCCCATATCTATTGGGAACACTGAAAGTTAAATAGCCAGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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3UTR CAA 72 bp | CAAAAGGATGATGTGTCCATGTTCAGTATGAGCATCTaGGTCAATGAATGGTGGATAAGTTGCCATCCATAT | + |
Preference number: 4 (lower is better) Translates to: QKDDVSMFSMSI*VNEWWISCHPY Trigger: ATATGGATGGCAACTTATCCACCATTCATTGACCAAGATGCTCATACTGAACATGGACACATCATCCTTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
||
CDS-3UTR CCA 90 bp | CCATTCTCCTTCTACTGTATGGTAGTAGGTGACTGTATCTTTGCGAGTCATTTTAGTATGAAGTCCATGTaGCTGGGATCATTTTTACAA | + |
Preference number: 4 (lower is better) Translates to: PFSFYCMVVGDCIFASHFSMKSM*LGSFLQ Trigger: TTGTAAAAATGATCCCAGCCACATGGACTTCATACT...AAAATGACTCGCAAAGATACAGTCACCTACTACCATACAGTAGAAGGAGAATGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
3UTR CAA 72 bp | ACATTTACTCATTCAGGAGACAGAACAATGCAGATCTaGGAGTTCAAGAACAATCTACAGAACAAGATCCAG | + |
Preference number: 4 (lower is better) Translates to: TFTHSGDRTMQI*EFKNNLQNKIQ Trigger: CTGGATCTTGTTCTGTAGATTGTTCTTGAACTCCAAGATCTGCATTGTTCTGTCTCCTGAATGAGTAAATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
||
CDS-3UTR TCA 90 bp | AGCAGAAAAGGCAGTATATATAGTAAATTCCTGGGGAAGTTTAGGAAAGTGCACAAATCTCCTTCATGGTaGAACTCTTCAGTGATTATG | + |
Preference number: 4 (lower is better) Translates to: SRKGSIYSKFLGKFRKVHKSPSW*NSSVIM Trigger: CATAATCACTGAAGAGTTTCACCATGAAGGAGATTT...GTGCACTTTCCTAAACTTCCCCAGGAATTTACTATATATACTGCCTTTTCTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
CDS-3UTR TCA 90 bp | CCACTAGATTCATGTCCAAAGACCAAAGTCTTTAAGTGCTCAGTTTCCTTTTTGATGAAACTCAGACCTTaGTTATTGGCCTTGACAATA | + |
Preference number: 4 (lower is better) Translates to: PLDSCPKTKVFKCSVSFLMKLRP*LLALTI Trigger: TATTGTCAAGGCCAATAATCAAGGTCTGAGTTTCAT...CAAAAAGGAAACTGAGCACTTAAAGACTTTGGTCTTTGGACATGAATCTAGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
||
CDS-3UTR CCA 90 bp | TCTACTGGCTATTTAACTTTCAGTGTTCCCAATAGATATGGGAGTGTTTGTAACATTTTATTTCCCTTGTaGTCATCTGGGAGGATGAGA | + |
Preference number: 4 (lower is better) Translates to: STGYLTFSVPNRYGSVCNILFPL*SSGRMR Trigger: TCTCATCCTCCCAGATGACCACAAGGGAAATAAAAT...GTTACAAACACTCCCATATCTATTGGGAACACTGAAAGTTAAATAGCCAGTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
||
CDS-3UTR CCA 90 bp | AACAATCTACAGAACAAGATCCAGGACATCCAAGTTTACTCAGTCAAAGTGTTGGAAATTTCAAGAACATaGTGTTCAGTGTTCATGACC | + |
Preference number: 4 (lower is better) Translates to: NNLQNKIQDIQVYSVKVLEISRT*CSVFMT Trigger: GGTCATGAACACTGAACACCATGTTCTTGAAATTTC...CAACACTTTGACTGAGTAAACTTGGATGTCCTGGATCTTGTTCTGTAGATTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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3UTR CAA 72 bp | AACACTAGCATACTGAATGACAGAAATTTGGATTCGTaGAATGTATCAGGCAAATTTCTAGACAAGAAGGCC | + |
Preference number: 4 (lower is better) Translates to: NTSILNDRNLDS*NVSGKFLDKKA Trigger: GGCCTTCTTGTCTAGAAATTTGCCTGATACATTCAACGAATCCAAATTTCTGTCATTCAGTATGCTAGTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR CAA 72 bp | TCCCAGACATTGGAACAAGAAACTAGAACATTGAAGTaGCCTTGGAAACTCCAAAATGTTCAAGATTCTAGA | + |
Preference number: 4 (lower is better) Translates to: SQTLEQETRTLK*PWKLQNVQDSR Trigger: TCTAGAATCTTGAACATTTTGGAGTTTCCAAGGCAACTTCAATGTTCTAGTTTCTTGTTCCAATGTCTGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR CCA 90 bp | ATACATTACATTTACTCATTCAGGAGACAGAACAATGCAGATCTTGGAGTTCAAAAGCAGAGACAAGTTTaGGAATTTGCAATAGCCAGA | + |
Preference number: 4 (lower is better) Translates to: IHYIYSFRRQNNADLGVQKQRQV*EFAIAR Trigger: TCTGGCTATTGCAAATTCCCAAACTTGTCTCTGCTT...TTGAACTCCAAGATCTGCATTGTTCTGTCTCCTGAATGAGTAAATGTAATGTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR CCA 90 bp | TCTACTGGCTATTTAACTTTCAGTGTTCCCAATAGATATGGGAGTGTTTGTAACGAAATTTCAAGAACATaGTGTTCAGTGTTCATGACC | + |
Preference number: 4 (lower is better) Translates to: STGYLTFSVPNRYGSVCNEISRT*CSVFMT Trigger: GGTCATGAACACTGAACACCATGTTCTTGAAATTTC...GTTACAAACACTCCCATATCTATTGGGAACACTGAAAGTTAAATAGCCAGTAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR CAA 72 bp | ACACAGAAGAACACTAGCATACTGAATGACAGAAATTaGGATTCGTTGAATGTATCAGGCAAATTTCTAGAC | + |
Preference number: 4 (lower is better) Translates to: TQKNTSILNDRN*DSLNVSGKFLD Trigger: GTCTAGAAATTTGCCTGATACATTCAACGAATCCAAATTTCTGTCATTCAGTATGCTAGTGTTCTTCTGTGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231879.3 |
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3UTR CAA 72 bp | ATAGTTCTTCATGCATTTTCTCATAAGTTGTCCACATaGAAATCAGCATGTATATATTGCTGCTCTGGTTCA | + |
Preference number: 4 (lower is better) Translates to: IVLHAFSHKLST*KSACIYCCSGS Trigger: TGAACCAGAGCAGCAATATATACATGCTGATTTCAATGTGGACAACTTATGAGAAAATGCATGAAGAACTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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3UTR CAA 72 bp | GAATTTGTAATTTGCCCAGCTAGTTTGTGTCTTGCTTaGGGGATTAAAATTAAGAGTTTGAATGAATCTCAG | + |
Preference number: 4 (lower is better) Translates to: EFVICPASLCLA*GIKIKSLNESQ Trigger: CTGAGATTCATTCAAACTCTTAATTTTAATCCCCAAAGCAAGACACAAACTAGCTGGGCAAATTACAAATTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR CAA 90 bp | GTGGGTAAACCTTCAGAGCCACCACAGAGGGATGGGGAGTGGAAAGAGGAGTTCACAGCTGAGCCCTTGTaGCACAAAAGGATGATGTGT | + |
Preference number: 5 (lower is better) Translates to: VGKPSEPPQRDGEWKEEFTAEPL*HKRMMC Trigger: ACACATCATCCTTTTGTGCAACAAGGGCTCAGCTGT...GAACTCCTCTTTCCACTCCCCATCCCTCTGTGGTGGCTCTGAAGGTTTACCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS TCA 90 bp | TGCAATTGTAGCAGCAGATGGCCTTGCCCTCCTGGCTTACTTTCCTaGATCCAGACTGACAACTCTCACTACACACAGATTGAGGGATCT | + |
Preference number: 5 (lower is better) Translates to: CNCSSRWPCPPGLLS*IQTDNSHYTQIEGS Trigger: AGATCCCTCAATCTGTGTGTAGTGAGAGTTGTCAGTCTGGATTCAGGAAAGTAAGCCAGGAGGGCAAGGCCATCTGCTGCTACAATTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231938.2 |
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CDS GCA 90 bp | AGTCTGCAGCTGTCTCATTTGAAATCTCATTCTCTGCACAAGGAGTaGAATTGTAGCAGCAGATGGCCTTGCCCTCCTGGCTTACTTTCC | + |
Preference number: 5 (lower is better) Translates to: SLQLSHLKSHSLHKE*NCSSRWPCPPGLLS Trigger: GGAAAGTAAGCCAGGAGGGCAAGGCCATCTGCTGCTACAATTGCACTCCTTGTGCAGAGAATGAGATTTCAAATGAGACAGCTGCAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS GCA 90 bp | GGTCTACATCTGTCTCATTTGAAATCTCATTCTCTGCACAAGGAGTaGAATTGTAGCAGCAGATGGCCTTGCCCTCCTGGCTTACTTTCC | + |
Preference number: 5 (lower is better) Translates to: GLHLSHLKSHSLHKE*NCSSRWPCPPGLLS Trigger: GGAAAGTAAGCCAGGAGGGCAAGGCCATCTGCTGCTACAATTGCACTCCTTGTGCAGAGAATGAGATTTCAAATGAGACAGATGTAGACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS CCA 90 bp | GCTGGCCATTGTATCATCTGCTCAGATAAGGACAACTGTTGGCCTTaGGGAGCATTTGCAGAAAAGGATCCTACTTTCACTTTTAGTCCA | + |
Preference number: 5 (lower is better) Translates to: AGHCIICSDKDNCWP*GAFAEKDPTFTFSP Trigger: TGGACTAAAAGTGAAAGTAGGATCCTTTTCTGCAAATGCTCCCCAAGGCCAACAGTTGTCCTTATCTGAGCAGATGATACAATGGCCAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 ENSMUST00000231938.2 |
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CDS-3UTR CAA 90 bp | TGGTACCATCTCTGGGATTCTATACGAAAGCAAGCTGAGCAAGCCAGTGAAAGCAAAGCAGAGACAAGTTaGGGAATTTGCAATAGCCAG | + |
Preference number: 5 (lower is better) Translates to: WYHLWDSIRKQAEQASESKAETS*GICNSQ Trigger: CTGGCTATTGCAAATTCCCAAACTTGTCTCTGCTTT...GCTTTCACTGGCTTGCTCAGCTTGCTTTCGTATAGAATCCCAGAGATGGTACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR CAA 90 bp | TGGAGAGCAGCTGAGGCTTGGCACTATGAGAAGCCATGGAATACCATTGTTGGGACCATTTTCAAATGGTaGTACTTGAAGTTGCTGAAG | + |
Preference number: 5 (lower is better) Translates to: WRAAEAWHYEKPWNTIVGTIFKW*YLKLLK Trigger: CTTCAGCAACTTCAAGTACAACCATTTGAAAATGGT...CCCAACAATGGTATTCCATGGCTTCTCATAGTGCCAAGCCTCAGCTGCTCTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR CAA 90 bp | TTCACCCCCTCCCACAATTCTTCTCACATACAACATCATATTCGCCTCTGCATACTCCTCAATGGCAAATaGCAGAGCCAGAATATACTG | + |
Preference number: 5 (lower is better) Translates to: FTPSHNSSHIQHHIRLCILLNGK*QSQNIL Trigger: CAGTATATTCTGGCTCTGCAATTTGCCATTGAGGAG...TATGCAGAGGCGAATATGATGTTGTATGTGAGAAGAATTGTGGGAGGGGGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR CAA 90 bp | TTCACCCCCTCCCACAATTCTTCTCACATACAACATCATATTCGCCTCTGCATAAAAGCTCACAGATTTTaGGAGGCAGTTGTTCCTCTC | + |
Preference number: 5 (lower is better) Translates to: FTPSHNSSHIQHHIRLCIKAHRF*EAVVPL Trigger: GAGAGGAACAACTGCCTCCAAAAATCTGTGAGCTTT...TATGCAGAGGCGAATATGATGTTGTATGTGAGAAGAATTGTGGGAGGGGGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS TCA 90 bp | ATGACTCTCTGGACACTTCACACACTGGTCTACATCTGTCTCATTTaGAATCTCATTCTCTGCACAAGGAGTGCAATTGTAGCAGCAGAT | + |
Preference number: 5 (lower is better) Translates to: MTLWTLHTLVYICLI*NLILCTRSAIVAAD Trigger: ATCTGCTGCTACAATTGCACTCCTTGTGCAGAGAATGAGATTTCAAATGAGACAGATGTAGACCAGTGTGTGAAGTGTCCAGAGAGTCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS GCA 90 bp | CAGAAAGCTCACAGATTTTTGGAGGCAGTTGTTCCTCTCTGTATTTaGATAATGACTCTCTGGACACTTCACACACTGGTCTACATCTGT | + |
Preference number: 5 (lower is better) Translates to: QKAHRFLEAVVPLCI*IMTLWTLHTLVYIC Trigger: ACAGATGTAGACCAGTGTGTGAAGTGTCCAGAGAGTCATTATGCAAATACAGAGAGGAACAACTGCCTCCAAAAATCTGTGAGCTTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS-3UTR CAA 90 bp | TTCACCCCCTCCCACAATTCTTCTCACATACAACATCATATTCGCCTCTGCATAAGAATTTTATTTCCCTaGTGGTCATCTGGGAGGATG | + |
Preference number: 5 (lower is better) Translates to: FTPSHNSSHIQHHIRLCIRILFP*WSSGRM Trigger: CATCCTCCCAGATGACCACAAGGGAAATAAAATTCT...TATGCAGAGGCGAATATGATGTTGTATGTGAGAAGAATTGTGGGAGGGGGTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR CAA 90 bp | TCCCCATTCTCCTTCTACTGTATGGTAGTAGGTGACTGTATCTTTGCGAGTCATTGTTCCTCTCTGTATTaGCATAATGACTCTCTGGAC | + |
Preference number: 5 (lower is better) Translates to: SPFSFYCMVVGDCIFASHCSSLY*HNDSLD Trigger: GTCCAGAGAGTCATTATGCAAATACAGAGAGGAACA...ATGACTCGCAAAGATACAGTCACCTACTACCATACAGTAGAAGGAGAATGGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS-3UTR CAA 90 bp | GATATGGAACATAATGAGGCCAACTCCTTTTCTCAGGCAGGGACCCATGTATTTCTACATCTGTCTCATTaGAAATCTCATTCTCTGCAC | + |
Preference number: 5 (lower is better) Translates to: DMEHNEANSFSQAGTHVFLHLSH*KSHSLH Trigger: GTGCAGAGAATGAGATTTCAAATGAGACAGATGTAG...AAATACATGGGTCCCTGCCTGAGAAAAGGAGTTGGCCTCATTATGTTCCATATC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS-3UTR CAA 90 bp | TATTGGGCCCAGAGAGTTGAAAGTACTAATTTGAATATGTTTGGCCAAGGGAGTAAAGCAGAGACAAGTTaGGGAATTTGCAATAGCCAG | + |
Preference number: 5 (lower is better) Translates to: YWAQRVESTNLNMFGQGSKAETS*GICNSQ Trigger: CTGGCTATTGCAAATTCCCAAACTTGTCTCTGCTTT...ACTCCCTTGGCCAAACATATTCAAATTAGTACTTTCAACTCTCTGGGCCCAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR CAA 90 bp | AGAACAATGCAGATCTTGGAGTTCAAGAACAATCTACAGAACAAGATCCAGGACAGAATTTTATTTCCCTaGTGGTCATCTGGGAGGATG | + |
Preference number: 5 (lower is better) Translates to: RTMQILEFKNNLQNKIQDRILFP*WSSGRM Trigger: CATCCTCCCAGATGACCACAAGGGAAATAAAATTCT...GTCCTGGATCTTGTTCTGTAGATTGTTCTTGAACTCCAAGATCTGCATTGTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR CAA 90 bp | AACAATCTACAGAACAAGATCCAGGACATCCAAGTTTACTCAGTCAAAGTGTTGCTGCAGCTGTCTCATTaGAAATCTCATTCTCTGCAC | + |
Preference number: 5 (lower is better) Translates to: NNLQNKIQDIQVYSVKVLLQLSH*KSHSLH Trigger: GTGCAGAGAATGAGATTTCAAATGAGACAGCTGCAG...CAACACTTTGACTGAGTAAACTTGGATGTCCTGGATCTTGTTCTGTAGATTGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR CAA 90 bp | TCTACTGGCTATTTAACTTTCAGTGTTCCCAATAGATATGGGAGTGTTTGTAACCTCCTCAATGGCAAATaGCAGAGCCAGAATATACTG | + |
Preference number: 5 (lower is better) Translates to: STGYLTFSVPNRYGSVCNLLNGK*QSQNIL Trigger: CAGTATATTCTGGCTCTGCAATTTGCCATTGAGGAG...GTTACAAACACTCCCATATCTATTGGGAACACTGAAAGTTAAATAGCCAGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR CAA 90 bp | AACAATCTACAGAACAAGATCCAGGACATCCAAGTTTACTCAGTCAAAGTGTTGTGGTTGTACTTGAAGTaGCTGAAGTCTCATCTCATG | + |
Preference number: 5 (lower is better) Translates to: NNLQNKIQDIQVYSVKVLWLYLK*LKSHLM Trigger: CATGAGATGAGACTTCAGCAACTTCAAGTACAACCA...CAACACTTTGACTGAGTAAACTTGGATGTCCTGGATCTTGTTCTGTAGATTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR CAA 90 bp | TATTGGGCCCAGAGAGTTGAAAGTACTAATTTGAATATGTTTGGCCAAGGGAGTGGATCTCTGAAAATATaGCTGGCCATTGTATCATCT | + |
Preference number: 5 (lower is better) Translates to: YWAQRVESTNLNMFGQGSGSLKI*LAIVSS Trigger: AGATGATACAATGGCCAGCAATATTTTCAGAGATCC...ACTCCCTTGGCCAAACATATTCAAATTAGTACTTTCAACTCTCTGGGCCCAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS-3UTR CAA 90 bp | TCTATGCATTTCTTAAAATCTACAATGCAAGGGATTCTTCAAGTAGGCCCAGATAAAGCAGAGACAAGTTaGGGAATTTGCAATAGCCAG | + |
Preference number: 5 (lower is better) Translates to: SMHFLKSTMQGILQVGPDKAETS*GICNSQ Trigger: CTGGCTATTGCAAATTCCCAAACTTGTCTCTGCTTT...ATCTGGGCCTACTTGAAGAATCCCTTGCATTGTAGATTTTAAGAAATGCATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR CAA 90 bp | TCTATGCATTTCTTAAAATCTACAATGCAAGGGATTCTTCAAGTAGGCCCAGATAGAATTTTATTTCCCTaGTGGTCATCTGGGAGGATG | + |
Preference number: 5 (lower is better) Translates to: SMHFLKSTMQGILQVGPDRILFP*WSSGRM Trigger: CATCCTCCCAGATGACCACAAGGGAAATAAAATTCT...ATCTGGGCCTACTTGAAGAATCCCTTGCATTGTAGATTTTAAGAAATGCATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR CAA 90 bp | TCTATGCATTTCTTAAAATCTACAATGCAAGGGATTCTTCAAGTAGGCCCAGATTGGTTGTACTTGAAGTaGCTGAAGTCTCATCTCATG | + |
Preference number: 5 (lower is better) Translates to: SMHFLKSTMQGILQVGPDWLYLK*LKSHLM Trigger: CATGAGATGAGACTTCAGCAACTTCAAGTACAACCA...ATCTGGGCCTACTTGAAGAATCCCTTGCATTGTAGATTTTAAGAAATGCATAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR CAA 90 bp | GGCCCTGACATTTTTCTATACTGGAGCATAGAACTTTCTCAGTTTCTTAATGGTGGATCTCTGAAAATATaGCTGGCCATTGTATCATCT | + |
Preference number: 5 (lower is better) Translates to: GPDIFLYWSIELSQFLNGGSLKI*LAIVSS Trigger: AGATGATACAATGGCCAGCAATATTTTCAGAGATCC...ACCATTAAGAAACTGAGAAAGTTCTATGCTCCAGTATAGAAAAATGTCAGGGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS-3UTR CAA 90 bp | AGATTTATGTGTGAATATGAACTTCACTCTTTAGAAGGTTTGGAGACTGTACTGTGGTTGTACTTGAAGTaGCTGAAGTCTCATCTCATG | + |
Preference number: 5 (lower is better) Translates to: RFMCEYELHSLEGLETVLWLYLK*LKSHLM Trigger: CATGAGATGAGACTTCAGCAACTTCAAGTACAACCA...CAGTACAGTCTCCAAACCTTCTAAAGAGTGAAGTTCATATTCACACATAAATCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR CAA 90 bp | GGCCCTGACATTTTTCTATACTGGAGCATAGAACTTTCTCAGTTTCTTAATGGTACCATTTTCAAATGGTaGTACTTGAAGTTGCTGAAG | + |
Preference number: 5 (lower is better) Translates to: GPDIFLYWSIELSQFLNGTIFKW*YLKLLK Trigger: CTTCAGCAACTTCAAGTACAACCATTTGAAAATGGT...ACCATTAAGAAACTGAGAAAGTTCTATGCTCCAGTATAGAAAAATGTCAGGGCC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR CAA 90 bp | CCACTAGATTCATGTCCAAAGACCAAAGTCTTTAAGTGCTCAGTTTCCTTTTTGACCATTTTCAAATGGTaGTACTTGAAGTTGCTGAAG | + |
Preference number: 5 (lower is better) Translates to: PLDSCPKTKVFKCSVSFLTIFKW*YLKLLK Trigger: CTTCAGCAACTTCAAGTACAACCATTTGAAAATGGT...CAAAAAGGAAACTGAGCACTTAAAGACTTTGGTCTTTGGACATGAATCTAGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 |
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CDS-3UTR CAA 90 bp | AGCAGAAAAGGCAGTATATATAGTAAATTCCTGGGGAAGTTTAGGAAAGTGCACAATGAAACTCAGACCTaGATTATTGGCCTTGACAAT | + |
Preference number: 5 (lower is better) Translates to: SRKGSIYSKFLGKFRKVHNETQT*IIGLDN Trigger: ATTGTCAAGGCCAATAATCAAGGTCTGAGTTTCATT...GTGCACTTTCCTAAACTTCCCCAGGAATTTACTATATATACTGCCTTTTCTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS TCA 90 bp | CTACTTTCACTTTTAGTCCAAGCCCCTTTGGTAAATTCCAAAGGTTaGGAATGTCATATTCCACATCTATTGTCTGTCTCCAATATAAAC | + |
Preference number: 5 (lower is better) Translates to: LLSLLVQAPLVNSKG*ECHIPHLLSVSNIN Trigger: GTTTATATTGGAGACAGACAATAGATGTGGAATATGACATTCTCAACCTTTGGAATTTACCAAAGGGGCTTGGACTAAAAGTGAAAGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 ENSMUST00000231938.2 |
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CDS TCA 72 bp | AGCAGCAGATGGCCTTGCCCTCCTGGCTTACTTTCCTaGATCCAGACTGACAACTCTCACTACACACAGATT | + |
Preference number: 6 (lower is better) Translates to: SSRWPCPPGLLS*IQTDNSHYTQI Trigger: AATCTGTGTGTAGTGAGAGTTGTCAGTCTGGATTCAGGAAAGTAAGCCAGGAGGGCAAGGCCATCTGCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231938.2 |
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CDS GCA 72 bp | CTGTCTCATTTGAAATCTCATTCTCTGCACAAGGAGTaGAATTGTAGCAGCAGATGGCCTTGCCCTCCTGGC | + |
Preference number: 6 (lower is better) Translates to: LSHLKSHSLHKE*NCSSRWPCPPG Trigger: GCCAGGAGGGCAAGGCCATCTGCTGCTACAATTGCACTCCTTGTGCAGAGAATGAGATTTCAAATGAGACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231938.2 |
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CDS CAA 90 bp | AAGCTGCCATGGAAAGAACACCATCCCTTCACCATTTTCAAATGGTaGTACTTGAAGTTGCTGAAGTCTCATCTCATGGAGGCTGTGAGC | + |
Preference number: 6 (lower is better) Translates to: KLPWKEHHPFTIFKW*YLKLLKSHLMEAVS Trigger: GCTCACAGCCTCCATGAGATGAGACTTCAGCAACTTCAAGTACAACCATTTGAAAATGGTGAAGGGATGGTGTTCTTTCCATGGCAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 ENSMUST00000231938.2 |
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CDS CAA 72 bp | CATCCCTTCACCATTTTCAAATGGTTGTACTTGAAGTaGCTGAAGTCTCATCTCATGGAGGCTGTGAGCCAG | + |
Preference number: 6 (lower is better) Translates to: HPFTIFKWLYLK*LKSHLMEAVSQ Trigger: CTGGCTCACAGCCTCCATGAGATGAGACTTCAGCAACTTCAAGTACAACCATTTGAAAATGGTGAAGGGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 ENSMUST00000231938.2 |
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CDS TCA 72 bp | CAGAATCAGTTCAAGACCACCTACCCCCTTCAACACTaGAGGGACTTTCAGAAACATAGCTGTCAAAATGAC | + |
Preference number: 6 (lower is better) Translates to: QNQFKTTYPLQH*RDFQKHSCQND Trigger: GTCATTTTGACAGCTATGTTTCTGAAAGTCCCTTCAGTGTTGAAGGGGGTAGGTGGTCTTGAACTGATTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000231938.2 |
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CDS CCA 72 bp | TGTATCATCTGCTCAGATAAGGACAACTGTTGGCCTTaGGGAGCATTTGCAGAAAAGGATCCTACTTTCACT | + |
Preference number: 6 (lower is better) Translates to: CIICSDKDNCWP*GAFAEKDPTFT Trigger: AGTGAAAGTAGGATCCTTTTCTGCAAATGCTCCCCAAGGCCAACAGTTGTCCTTATCTGAGCAGATGATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 ENSMUST00000231938.2 |
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CDS CAA 72 bp | GAACACCATCCCTTCACCATTTTCAAATGGTTGTACTaGAAGTTGCTGAAGTCTCATCTCATGGAGGCTGTG | + |
Preference number: 6 (lower is better) Translates to: EHHPFTIFKWLY*KLLKSHLMEAV Trigger: CACAGCCTCCATGAGATGAGACTTCAGCAACTTCAAGTACAACCATTTGAAAATGGTGAAGGGATGGTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 ENSMUST00000231938.2 |
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CDS CAA 90 bp | ACTGACAACTCTCACTACACACAGATTGAGGGATCTCTGAAAATATaGCTGGCCATTGTATCATCTGCTCAGATAAGGACAACTGTTGGC | + |
Preference number: 6 (lower is better) Translates to: TDNSHYTQIEGSLKI*LAIVSSAQIRTTVG Trigger: GCCAACAGTTGTCCTTATCTGAGCAGATGATACAATGGCCAGCAATATTTTCAGAGATCCCTCAATCTGTGTGTAGTGAGAGTTGTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231938.2 |
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CDS TCA 72 bp | CTGACAACTCTCACTACACACAGATTGAGGGATCTCTaGAAATATTGCTGGCCATTGTATCATCTGCTCAGA | + |
Preference number: 6 (lower is better) Translates to: LTTLTTHRLRDL*KYCWPLYHLLR Trigger: TCTGAGCAGATGATACAATGGCCAGCAATATTTTCAGAGATCCCTCAATCTGTGTGTAGTGAGAGTTGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231938.2 |
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CDS CCA 72 bp | GCAGTTGTTCCTCTCTGTATTTGCATAATGACTCTCTaGACACTTCACACACTGGTCTACATCTGTCTCATT | + |
Preference number: 6 (lower is better) Translates to: AVVPLCICIMTL*TLHTLVYICLI Trigger: AATGAGACAGATGTAGACCAGTGTGTGAAGTGTCCAGAGAGTCATTATGCAAATACAGAGAGGAACAACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS CAA 72 bp | CTGGACACTTCACACACTGGTCTACATCTGTCTCATTaGAAATCTCATTCTCTGCACAAGGAGTGCAATTGT | + |
Preference number: 6 (lower is better) Translates to: LDTSHTGLHLSH*KSHSLHKECNC Trigger: ACAATTGCACTCCTTGTGCAGAGAATGAGATTTCAAATGAGACAGATGTAGACCAGTGTGTGAAGTGTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS CAA 90 bp | TTCCTCTCCATCTCCTCCCTAAAATCTGATAGAATTTTATTTCCCTaGTGGTCATCTGGGAGGATGAGACCAACCCACAACCATCTAAAA | + |
Preference number: 6 (lower is better) Translates to: FLSISSLKSDRILFP*WSSGRMRPTHNHLK Trigger: TTTTAGATGGTTGTGGGTTGGTCTCATCCTCCCAGATGACCACAAGGGAAATAAAATTCTATCAGATTTTAGGGAGGAGATGGAGAGGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 ENSMUST00000231938.2 |
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CDS TCA 72 bp | CAAGAGATATGTTGGGTAAAAGATTGGGGTTCCCATTaGTCTCCTCAATGGCAAATTGCAGAGCCAGAATAT | + |
Preference number: 6 (lower is better) Translates to: QEICWVKDWGSH*SPQWQIAEPEY Trigger: ATATTCTGGCTCTGCAATTTGCCATTGAGGAGATCAATGGGAACCCCAATCTTTTACCCAACATATCTCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 ENSMUST00000231938.2 |
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CDS TCA 72 bp | TCTGGGAGGATGAGACCAACCCACAACCATCTAAAATaGACAATCAAGGAAACAATGGCAAGTGTAAGAGAT | + |
Preference number: 6 (lower is better) Translates to: SGRMRPTHNHLK*TIKETMASVRD Trigger: ATCTCTTACACTTGCCATTGTTTCCTTGATTGTTCATTTTAGATGGTTGTGGGTTGGTCTCATCCTCCCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 ENSMUST00000231938.2 |
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CDS TCA 72 bp | TGGACACTTCACACACTGGTCTACATCTGTCTCATTTaGAATCTCATTCTCTGCACAAGGAGTGCAATTGTA | + |
Preference number: 6 (lower is better) Translates to: WTLHTLVYICLI*NLILCTRSAIV Trigger: TACAATTGCACTCCTTGTGCAGAGAATGAGATTTCAAATGAGACAGATGTAGACCAGTGTGTGAAGTGTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079206.8 |
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CDS CAA 72 bp | TGGAAAGAACACCATCCCTTCACCATTTTCAAATGGTaGTACTTGAAGTTGCTGAAGTCTCATCTCATGGAG | + |
Preference number: 6 (lower is better) Translates to: WKEHHPFTIFKW*YLKLLKSHLME Trigger: CTCCATGAGATGAGACTTCAGCAACTTCAAGTACAACCATTTGAAAATGGTGAAGGGATGGTGTTCTTTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 ENSMUST00000231938.2 |
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CDS CAA 72 bp | TCTCACTACACACAGATTGAGGGATCTCTGAAAATATaGCTGGCCATTGTATCATCTGCTCAGATAAGGACA | + |
Preference number: 6 (lower is better) Translates to: SHYTQIEGSLKI*LAIVSSAQIRT Trigger: TGTCCTTATCTGAGCAGATGATACAATGGCCAGCAATATTTTCAGAGATCCCTCAATCTGTGTGTAGTGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079206.8 ENSMUST00000231938.2 |
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CDS TCA 72 bp | CTTTTAGTCCAAGCCCCTTTGGTAAATTCCAAAGGTTaGGAATGTCATATTCCACATCTATTGTCTGTCTCC | + |
Preference number: 6 (lower is better) Translates to: LLVQAPLVNSKG*ECHIPHLLSVS Trigger: GGAGACAGACAATAGATGTGGAATATGACATTCTCAACCTTTGGAATTTACCAAAGGGGCTTGGACTAAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 ENSMUST00000231938.2 |
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CDS TCA 72 bp | AATCAGAAATTTCAAGAACATGGTGTTCAGTGTTCATaGCCCAGACAATCCATGTCAATAACCTTTGCCCAA | + |
Preference number: 6 (lower is better) Translates to: NQKFQEHGVQCS*PRQSMSITFAQ Trigger: TTGGGCAAAGGTTATTGACATGGATTGTCTGGGTCATGAACACTGAACACCATGTTCTTGAAATTTCTGATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 ENSMUST00000231938.2 |
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CDS GCA 72 bp | GTGTTCATGACCCAGACAATCCATGTCAATAACCTTTaGCCAATATTTCTCATTAGACCTTCTAGAGAATCA | + |
Preference number: 6 (lower is better) Translates to: VFMTQTIHVNNL*PIFLIRPSRES Trigger: TGATTCTCTAGAAGGTCTAATGAGAAATATTGGGCAAAGGTTATTGACATGGATTGTCTGGGTCATGAACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 ENSMUST00000231938.2 |
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CDS CAA 72 bp | ACTTTTAGTCCAAGCCCCTTTGGTAAATTCCAAAGGTaGAGAATGTCATATTCCACATCTATTGTCTGTCTC | + |
Preference number: 6 (lower is better) Translates to: TFSPSPFGKFQR*RMSYSTSIVCL Trigger: GAGACAGACAATAGATGTGGAATATGACATTCTCAACCTTTGGAATTTACCAAAGGGGCTTGGACTAAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 ENSMUST00000231938.2 |
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CDS CAA 90 bp | CCTACTTTCACTTTTAGTCCAAGCCCCTTTGGTAAATTCCAAAGGTaGAGAATGTCATATTCCACATCTATTGTCTGTCTCCAATATAAA | + |
Preference number: 6 (lower is better) Translates to: PTFTFSPSPFGKFQR*RMSYSTSIVCLQYK Trigger: TTTATATTGGAGACAGACAATAGATGTGGAATATGACATTCTCAACCTTTGGAATTTACCAAAGGGGCTTGGACTAAAAGTGAAAGTAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 ENSMUST00000231938.2 |
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CDS CAA 72 bp | ATTATTACATTTGTCTCATCCATATTTTTCCAGAATTaGGCAAAGTATGAAGTCCATGTGGCTGGGATCATT | + |
Preference number: 6 (lower is better) Translates to: IITFVSSIFFQN*AKYEVHVAGII Trigger: AATGATCCCAGCCACATGGACTTCATACTTTGCCAAATTCTGGAAAAATATGGATGAGACAAATGTAATAAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079206.8 ENSMUST00000231879.3 ENSMUST00000231938.2 |