Pregenerated sensors for VMN2R91 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091206Ensembl transcript IDs: ENSMUST00000172359.3
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TTGTGGTCATCTGGGATGATGAGACCAACCCAAGACCACCGAAAATaGACCATCAGTGAAACAATGGCAAGTGAAAGAGATGTGTCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: LWSSGMMRPTQDHRK*TISETMASERDVSL Trigger: AAGGGACACATCTCTTTCACTTGCCATTGTTTCACTGATGGTTCATTTTCGGTGGTCTTGGGTTGGTCTCATCATCCCAGATGACCACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS GCA 90 bp | CAGAAAGCTCACAGATTTTTGGAAGCAGTTGTTCTTCTCTGTATTTaGATAATGACCCTCTGGACACTTCACACACTGGTCTACATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QKAHRFLEAVVLLCI*IMTLWTLHTLVYIC Trigger: GCAGATGTAGACCAGTGTGTGAAGTGTCCAGAGGGTCATTATGCAAATACAGAGAAGAACAACTGCTTCCAAAAATCTGTGAGCTTTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS TCA 90 bp | GCTGAGCCCTTGTTGCACAAAATGATGATGTGTCCATATTCAGAATaGGCATCTTGGTCATTGAATGGTGGAGAAGTTGCCATCCATATT | + |
|
Preference number: 5 (lower is better) Translates to: AEPLLHKMMMCPYSE*ASWSLNGGEVAIHI Trigger: AATATGGATGGCAACTTCTCCACCATTCAATGACCAAGATGCTCATTCTGAATATGGACACATCATCATTTTGTGCAACAAGGGCTCAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS GCA 90 bp | TCCATATTCAGAATGAGCATCTTGGTCATTGAATGGTGGAGAAGTTaGCATCCATATTCCACAAAGAAGAAGTTGGATCAGGGTGCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SIFRMSILVIEWWRS*HPYSTKKKLDQGAD Trigger: ATCTGCACCCTGATCCAACTTCTTCTTTGTGGAATATGGATGGCAACTTCTCCACCATTCAATGACCAAGATGCTCATTCTGAATATGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS GCA 90 bp | CAACAAGATAATGTAACACTTGGGACCAAATATAAAGGCAAGGAGTaGTGTGCTGGAAGCCAAGATAGAGAATACTTCCATAGCAATCAT | + |
|
Preference number: 5 (lower is better) Translates to: QQDNVTLGTKYKGKE*CAGSQDREYFHSNH Trigger: ATGATTGCTATGGAAGTATTCTCTATCTTGGCTTCCAGCACAGCACTCCTTGCCTTTATATTTGGTCCCAAGTGTTACATTATCTTGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS CCA 90 bp | TTTTTGGAAGCAGTTGTTCTTCTCTGTATTTGCATAATGACCCTCTaGACACTTCACACACTGGTCTACATCTGCTGTCTCATTAGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: FLEAVVLLCICIMTL*TLHTLVYICCLIRN Trigger: ATTTCTAATGAGACAGCAGATGTAGACCAGTGTGTGAAGTGTCCAGAGGGTCATTATGCAAATACAGAGAAGAACAACTGCTTCCAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS CCA 90 bp | ACTATGGTCACTCAAGAGAGGATCATAAGGTCCAAAAGTAATCTGTaGAAATTTAAGGAATTGAAGCAATGTCCCAATTTGGGCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: TMVTQERIIRSKSNL*KFKELKQCPNLGRC Trigger: ACATCTGCCCAAATTGGGACATTGCTTCAATTCCTTAAATTTCCACAGATTACTTTTGGACCTTATGATCCTCTCTTGAGTGACCATAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS CCA 90 bp | AATGATGATGTGTCCATATTCAGAATGAGCATCTTGGTCATTGAATaGTGGAGAAGTTGCCATCCATATTCCACAAAGAAGAAGTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NDDVSIFRMSILVIE*WRSCHPYSTKKKLD Trigger: ATCCAACTTCTTCTTTGTGGAATATGGATGGCAACTTCTCCACCATTCAATGACCAAGATGCTCATTCTGAATATGGACACATCATCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS TCA 90 bp | TTTAAGGAATTGAAGCAATGTCCCAATTTGGGCAGATGTTTTCCATaGTGTTCCTGTGAGTGCAGCAGTGAAGTTTCTCTTTTTACAATT | + |
|
Preference number: 5 (lower is better) Translates to: FKELKQCPNLGRCFP*CSCECSSEVSLFTI Trigger: AATTGTAAAAAGAGAAACTTCACTGCTGCACTCACAGGAACATCATGGAAAACATCTGCCCAAATTGGGACATTGCTTCAATTCCTTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS TCA 72 bp | ACAGAGGTATCCCAGGACAGAGTGGAAGGCAACAGCTaGGCCCTTGTTGCACAAAATGATGATGTGTCCATA | + |
|
Preference number: 6 (lower is better) Translates to: TEVSQDRVEGNS*ALVAQNDDVSI Trigger: TATGGACACATCATCATTTTGTGCAACAAGGGCTCAGCTGTTGCCTTCCACTCTGTCCTGGGATACCTCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS CAA 90 bp | CCATGGAAAGGACACCATCCCTTCACCATTCTTAAACTGTTGCATTaGAATTTGCTGAAGTGTCATCTCATGGAGGCTGTGAGCCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: PWKGHHPFTILKLLH*NLLKCHLMEAVSHS Trigger: GCTGTGGCTCACAGCCTCCATGAGATGACACTTCAGCAAATTCAAATGCAACAGTTTAAGAATGGTGAAGGGATGGTGTCCTTTCCATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS GCA 72 bp | GTCTACATCTGCTGTCTCATTAGAAATCTCATTGTCTaGACAAGGAGTGCACTTGTAGCAGCAGATGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: VYICCLIRNLIV*TRSALVAADGL Trigger: AAGGCCATCTGCTGCTACAAGTGCACTCCTTGTGCAGACAATGAGATTTCTAATGAGACAGCAGATGTAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS GCA 72 bp | ATGACCCTCTGGACACTTCACACACTGGTCTACATCTaGTGTCTCATTAGAAATCTCATTGTCTGCACAAGG | + |
|
Preference number: 6 (lower is better) Translates to: MTLWTLHTLVYI*CLIRNLIVCTR Trigger: CCTTGTGCAGACAATGAGATTTCTAATGAGACAGCAGATGTAGACCAGTGTGTGAAGTGTCCAGAGGGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS CCA 72 bp | CCCAAGACCACCGAAAATGAACCATCAGTGAAACAATaGCAAGTGAAAGAGATGTGTCCCTTGGGGACATTT | + |
|
Preference number: 6 (lower is better) Translates to: PKTTENEPSVKQ*QVKEMCPLGTF Trigger: AAATGTCCCCAAGGGACACATCTCTTTCACTTGCCATTGTTTCACTGATGGTTCATTTTCGGTGGTCTTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS TCA 72 bp | TCTGGGATGATGAGACCAACCCAAGACCACCGAAAATaGACCATCAGTGAAACAATGGCAAGTGAAAGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: SGMMRPTQDHRK*TISETMASERD Trigger: ATCTCTTTCACTTGCCATTGTTTCACTGATGGTTCATTTTCGGTGGTCTTGGGTTGGTCTCATCATCCCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS GCA 72 bp | TCTCTCACTTCAATGTCCTTCAGGAAAGTGTTAAGCTaGCATGGAAAGGACACCATCCCTTCACCATTCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SLTSMSFRKVLS*HGKDTIPSPFL Trigger: TAAGAATGGTGAAGGGATGGTGTCCTTTCCATGGCAGCTTAACACTTTCCTGAAGGACATTGAAGTGAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS CAA 72 bp | GGACACCATCCCTTCACCATTCTTAAACTGTTGCATTaGAATTTGCTGAAGTGTCATCTCATGGAGGCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: GHHPFTILKLLH*NLLKCHLMEAV Trigger: CACAGCCTCCATGAGATGACACTTCAGCAAATTCAAATGCAACAGTTTAAGAATGGTGAAGGGATGGTGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS CAA 90 bp | AAAGGACACCATCCCTTCACCATTCTTAAACTGTTGCATTTGAATTaGCTGAAGTGTCATCTCATGGAGGCTGTGAGCCACAGCATATAC | + |
|
Preference number: 6 (lower is better) Translates to: KGHHPFTILKLLHLN*LKCHLMEAVSHSIY Trigger: GTATATGCTGTGGCTCACAGCCTCCATGAGATGACACTTCAGCAAATTCAAATGCAACAGTTTAAGAATGGTGAAGGGATGGTGTCCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS CAA 90 bp | CCAGAAAGCTCACAGATTTTTGGAAGCAGTTGTTCTTCTCTGTATTaGCATAATGACCCTCTGGACACTTCACACACTGGTCTACATCTG | + |
|
Preference number: 6 (lower is better) Translates to: PESSQIFGSSCSSLY*HNDPLDTSHTGLHL Trigger: CAGATGTAGACCAGTGTGTGAAGTGTCCAGAGGGTCATTATGCAAATACAGAGAAGAACAACTGCTTCCAAAAATCTGTGAGCTTTCTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS TCA 72 bp | TTGAAGCAATGTCCCAATTTGGGCAGATGTTTTCCATaGTGTTCCTGTGAGTGCAGCAGTGAAGTTTCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LKQCPNLGRCFP*CSCECSSEVSL Trigger: AAGAGAAACTTCACTGCTGCACTCACAGGAACATCATGGAAAACATCTGCCCAAATTGGGACATTGCTTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS TCA 72 bp | GGCCATTGTATCATCTGTTCTGATAAAGACAGCTGTTaGCCCTGGGGAGCATTTACAGAAAAGGATCCTATT | + |
|
Preference number: 6 (lower is better) Translates to: GHCIICSDKDSC*PWGAFTEKDPI Trigger: AATAGGATCCTTTTCTGTAAATGCTCCCCAGGGTCAACAGCTGTCTTTATCAGAACAGATGATACAATGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS GCA 72 bp | CACAGATTTTTGGAAGCAGTTGTTCTTCTCTGTATTTaGATAATGACCCTCTGGACACTTCACACACTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HRFLEAVVLLCI*IMTLWTLHTLV Trigger: GACCAGTGTGTGAAGTGTCCAGAGGGTCATTATGCAAATACAGAGAAGAACAACTGCTTCCAAAAATCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS GCA 72 bp | AGAATGAGCATCTTGGTCATTGAATGGTGGAGAAGTTaGCATCCATATTCCACAAAGAAGAAGTTGGATCAG | + |
|
Preference number: 6 (lower is better) Translates to: RMSILVIEWWRS*HPYSTKKKLDQ Trigger: CTGATCCAACTTCTTCTTTGTGGAATATGGATGGCAACTTCTCCACCATTCAATGACCAAGATGCTCATTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS GCA 72 bp | AATGTAACACTTGGGACCAAATATAAAGGCAAGGAGTaGTGTGCTGGAAGCCAAGATAGAGAATACTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: NVTLGTKYKGKE*CAGSQDREYFH Trigger: ATGGAAGTATTCTCTATCTTGGCTTCCAGCACAGCACTCCTTGCCTTTATATTTGGTCCCAAGTGTTACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS CCA 72 bp | GTGTCCATATTCAGAATGAGCATCTTGGTCATTGAATaGTGGAGAAGTTGCCATCCATATTCCACAAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VSIFRMSILVIE*WRSCHPYSTKK Trigger: CTTCTTTGTGGAATATGGATGGCAACTTCTCCACCATTCAATGACCAAGATGCTCATTCTGAATATGGACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS CAA 72 bp | TCACAGATTTTTGGAAGCAGTTGTTCTTCTCTGTATTaGCATAATGACCCTCTGGACACTTCACACACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: SQIFGSSCSSLY*HNDPLDTSHTG Trigger: ACCAGTGTGTGAAGTGTCCAGAGGGTCATTATGCAAATACAGAGAAGAACAACTGCTTCCAAAAATCTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS CAA 72 bp | CAAGGGGTCTTCATAGGCCAGAAAGCTCACAGATTTTaGGAAGCAGTTGTTCTTCTCTGTATTTGCATAATG | + |
|
Preference number: 6 (lower is better) Translates to: QGVFIGQKAHRF*EAVVLLCICIM Trigger: CATTATGCAAATACAGAGAAGAACAACTGCTTCCAAAAATCTGTGAGCTTTCTGGCCTATGAAGACCCCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS CAA 90 bp | CTTGTTGCACAAAATGATGATGTGTCCATATTCAGAATGAGCATCTaGGTCATTGAATGGTGGAGAAGTTGCCATCCATATTCCACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LVAQNDDVSIFRMSI*VIEWWRSCHPYSTK Trigger: CTTTGTGGAATATGGATGGCAACTTCTCCACCATTCAATGACCAAGATGCTCATTCTGAATATGGACACATCATCATTTTGTGCAACAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS TCA 72 bp | TTGTTGCACAAAATGATGATGTGTCCATATTCAGAATaGGCATCTTGGTCATTGAATGGTGGAGAAGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLHKMMMCPYSE*ASWSLNGGEVA Trigger: GGCAACTTCTCCACCATTCAATGACCAAGATGCTCATTCTGAATATGGACACATCATCATTTTGTGCAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS CCA 72 bp | TCCATATTCAGAATGAGCATCTTGGTCATTGAATGGTaGAGAAGTTGCCATCCATATTCCACAAAGAAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SIFRMSILVIEW*RSCHPYSTKKK Trigger: CTTCTTCTTTGTGGAATATGGATGGCAACTTCTCCACCATTCAATGACCAAGATGCTCATTCTGAATATGGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS CAA 72 bp | AACACCAGCATACTGAATGACAGAAACTTGGATTCGTaGAATGTATCAGGCAAATTTCTAGACAAGAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: NTSILNDRNLDS*NVSGKFLDKKA Trigger: GGCCTTCTTGTCTAGAAATTTGCCTGATACATTCAACGAATCCAAGTTTCTGTCATTCAGTATGCTGGTGTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS GCA 72 bp | ATGTTCATGACCCAGACATTCCATGTCAATAACCTTTaGCCAATATTTCTCATTAGACTTGCTAGAGAATCA | + |
|
Preference number: 6 (lower is better) Translates to: MFMTQTFHVNNL*PIFLIRLARES Trigger: TGATTCTCTAGCAAGTCTAATGAGAAATATTGGGCAAAGGTTATTGACATGGAATGTCTGGGTCATGAACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS CCA 72 bp | ACTCAAGAGAGGATCATAAGGTCCAAAAGTAATCTGTaGAAATTTAAGGAATTGAAGCAATGTCCCAATTTG | + |
|
Preference number: 6 (lower is better) Translates to: TQERIIRSKSNL*KFKELKQCPNL Trigger: CAAATTGGGACATTGCTTCAATTCCTTAAATTTCCACAGATTACTTTTGGACCTTATGATCCTCTCTTGAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||
| CDS CAA 72 bp | ATAAGGTCCAAAAGTAATCTGTGGAAATTTAAGGAATaGAAGCAATGTCCCAATTTGGGCAGATGTTTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: IRSKSNLWKFKE*KQCPNLGRCFP Trigger: TGGAAAACATCTGCCCAAATTGGGACATTGCTTCAATTCCTTAAATTTCCACAGATTACTTTTGGACCTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172359.3 |
||