Pregenerated sensors for VMN2R9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091624Ensembl transcript IDs: ENSMUST00000170419.3, ENSMUST00000233198.2, ENSMUST00000233547.2, ENSMUST00000233835.2
Found 285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | ATTGGTTATGGGAGGAGTAAATTTGGGGGAGGGGTCAGTCTAGACTaGGCAAACAACTCCTGGGACAGAGGTTTCCACACACTTTCACCT | + |
Preference number: 1 (lower is better) Translates to: IGYGRSKFGGGVSLD*ANNSWDRGFHTLSP Trigger: AGGTGAAAGTGTGTGGAAACCTCTGTCCCAGGAGTTGTTTGCTCAGTCTAGACTGACCCCTCCCCCAAATTTACTCCTCCCATAACCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR TCA 90 bp | TTTTTCAACACTACAGACTCCAAAACAACTTCCTCCCTCAGTGACTaGCAGCACAGAGGGCTGCAGTACTACTCAGTTTCTTACTCTTCT | + |
Preference number: 1 (lower is better) Translates to: FFNTTDSKTTSSLSD*QHRGLQYYSVSYSS Trigger: AGAAGAGTAAGAAACTGAGTAGTACTGCAGCCCTCTGTGCTGTCAGTCACTGAGGGAGGAAGTTGTTTTGGAGTCTGTAGTGTTGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR TCA 90 bp | GAAATGAGAGTTTTGATGGTAATTGAGGTGAGTTCAGCTAGAGCTTaGGAAGAGCTGTGGGACCTCTACTCATGCATCTGTAAGAGCACT | + |
Preference number: 1 (lower is better) Translates to: EMRVLMVIEVSSARA*EELWDLYSCICKST Trigger: AGTGCTCTTACAGATGCATGAGTAGAGGTCCCACAGCTCTTCTCAAGCTCTAGCTGAACTCACCTCAATTACCATCAAAACTCTCATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR TCA 90 bp | TTCCTAGCAACCACACGATGGTTAACAACCATCTGTAATGGGATCTaGTGCTCTATTCAGGTGTGTGTGAACAGTGACAGTGTACTCACA | + |
Preference number: 1 (lower is better) Translates to: FLATTRWLTTICNGI*CSIQVCVNSDSVLT Trigger: TGTGAGTACACTGTCACTGTTCACACACACCTGAATAGAGCATCAGATCCCATTACAGATGGTTGTTAACCATCGTGTGGTTGCTAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR CCA 90 bp | GTGTCAGTGTATCTGAGTTTGCTTCTCAGTGTCTGCCTTTCTGTCTaGGAGCCTGTCCTCAGCAAATCACTGATATTTGAATCCTTGAAT | + |
Preference number: 1 (lower is better) Translates to: VSVYLSLLLSVCLSV*EPVLSKSLIFESLN Trigger: ATTCAAGGATTCAAATATCAGTGATTTGCTGAGGACAGGCTCCCAGACAGAAAGGCAGACACTGAGAAGCAAACTCAGATACACTGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR TCA 90 bp | GAAGGATTACTGCACTGTGCATGGCAGCATGGAAGGAAGAAAGCTTaGAAAGCTTCTACCCTACACAACCGTTTACAGAAGACTGTAAAT | + |
Preference number: 1 (lower is better) Translates to: EGLLHCAWQHGRKKA*KASTLHNRLQKTVN Trigger: ATTTACAGTCTTCTGTAAACGGTTGTGTAGGGTAGAAGCTTTTCAAGCTTTCTTCCTTCCATGCTGCCATGCACAGTGCAGTAATCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR TCA 90 bp | ATGTTTGTTACATTAGAGACAAAGTCAGGAAGTGGGAACCAACCTTaGCAAAACACCTGCAGCAAGTCAGTGACATACCAGGTGCTTTTT | + |
Preference number: 1 (lower is better) Translates to: MFVTLETKSGSGNQP*QNTCSKSVTYQVLF Trigger: AAAAAGCACCTGGTATGTCACTGACTTGCTGCAGGTGTTTTGTCAAGGTTGGTTCCCACTTCCTGACTTTGTCTCTAATGTAACAAACAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR GCA 90 bp | ATTACAGTAATGTTGCATTACCAGAAGTGGAGGGCAGTTTCTTCTTaGCTTTGTTCAGATTCCTTTATCCCTAACTATATGCCACTCCAC | + |
Preference number: 1 (lower is better) Translates to: ITVMLHYQKWRAVSS*LCSDSFIPNYMPLH Trigger: GTGGAGTGGCATATAGTTAGGGATAAAGGAATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTACTGTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CCA 90 bp | GAAGTCAAGACAAGAACTTGGATGCAGACAGTCAATGAGAGCACATaGAATAATGCTGATTACTGGCTTCATTCTAGTCTGTGCTCTTTA | + |
Preference number: 1 (lower is better) Translates to: EVKTRTWMQTVNEST*NNADYWLHSSLCSL Trigger: TAAAGAGCACAGACTAGAATGAAGCCAGTAATCAGCATTATTCCATGTGCTCTCATTGACTGTCTGCATCCAAGTTCTTGTCTTGACTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CCA 90 bp | AAGAAAGGCATCAAAGGTTCTATGTACAGCCCTCTTTCAGTTCTCTaGGTTATAAAGTTAGAAGTGGTCATTGGTTCACCCAAGTTCCTA | + |
Preference number: 1 (lower is better) Translates to: KKGIKGSMYSPLSVL*VIKLEVVIGSPKFL Trigger: TAGGAACTTGGGTGAACCAATGACCACTTCTAACTTTATAACCCAGAGAACTGAAAGAGGGCTGTACATAGAACCTTTGATGCCTTTCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR TCA 90 bp | CAACCGTTTACAGAAGACTGTAAATCTCCTGTAAAGAATGGAAGATaGGTTATAACCAGGGAAGGAAACAAATATTGGCCAGTTCGTACC | + |
Preference number: 1 (lower is better) Translates to: QPFTEDCKSPVKNGR*VITREGNKYWPVRT Trigger: GGTACGAACTGGCCAATATTTGTTTCCTTCCCTGGTTATAACTCATCTTCCATTCTTTACAGGAGATTTACAGTCTTCTGTAAACGGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR TCA 90 bp | CTGTGTTTAGCCTTAATGAGAAAAACATCCTTCGATGCCTGGCTCTaGGGTCATCTCCTCAACTTTCTGAATGGATACATTTTTATGAGT | + |
Preference number: 1 (lower is better) Translates to: LCLALMRKTSFDAWL*GHLLNFLNGYIFMS Trigger: ACTCATAAAAATGTATCCATTCAGAAAGTTGAGGAGATGACCTCAGAGCCAGGCATCGAAGGATGTTTTTCTCATTAAGGCTAAACACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR GCA 90 bp | ACCAGTGATAAGATATGGAAGGAGACACAGCACACAGTTCATATGTaGTCTTGTTGTATCTATGGGACCTTGGACATAATCAAGTTTTCA | + |
Preference number: 1 (lower is better) Translates to: TSDKIWKETQHTVHM*SCCIYGTLDIIKFS Trigger: TGAAAACTTGATTATGTCCAAGGTCCCATAGATACAACAAGAGCACATATGAACTGTGTGCTGTGTCTCCTTCCATATCTTATCACTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CCA 90 bp | AATATGATGGTGAAATTACTGAGTGCTTACATCTTTCTCAGAAGATaGGTGAAGCTCACCTATGTAGCAATGTGTTTCTATCCTGGAGCA | + |
Preference number: 1 (lower is better) Translates to: NMMVKLLSAYIFLRR*VKLTYVAMCFYPGA Trigger: TGCTCCAGGATAGAAACACATTGCTACATAGGTGAGCTTCACCCATCTTCTGAGAAAGATGTAAGCACTCAGTAATTTCACCATCATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR GCA 90 bp | TCTGTGCTCTTTATAGTCTTCTTTCTTATAACTCCCATAACAATTTaGCTCTATAATTGGCATTATATTAGGCAGTGCTGTGCTGCCCTA | + |
Preference number: 1 (lower is better) Translates to: SVLFIVFFLITPITI*LYNWHYIRQCCAAL Trigger: TAGGGCAGCACAGCACTGCCTAATATAATGCCAATTATAGAGGCAAATTGTTATGGGAGTTATAAGAAAGAAGACTATAAAGAGCACAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CCA 90 bp | CTTTCTGAATGGATACATTTTTATGAGTCTACCAGTGATAAGATATaGAAGGAGACACAGCACACAGTTCATATGTGCTCTTGTTGTATC | + |
Preference number: 1 (lower is better) Translates to: LSEWIHFYESTSDKI*KETQHTVHMCSCCI Trigger: GATACAACAAGAGCACATATGAACTGTGTGCTGTGTCTCCTTCCATATCTTATCACTGGTAGACTCATAAAAATGTATCCATTCAGAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CCA 90 bp | ATAGTCTTCTTTCTTATAACTCCCATAACAATTTGCCTCTATAATTaGCATTATATTAGGCAGTGCTGTGCTGCCCTACATTATAAGTAC | + |
Preference number: 1 (lower is better) Translates to: IVFFLITPITICLYN*HYIRQCCAALHYKY Trigger: GTACTTATAATGTAGGGCAGCACAGCACTGCCTAATATAATGCCAATTATAGAGGCAAATTGTTATGGGAGTTATAAGAAAGAAGACTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CAA 90 bp | TCTGTCTGGGAGCCTGTCCTCAGCAAATCACTGATATTTGAATCCTaGAATCAGGCTTCTGGCCCAGAGAGCTCTAAATCCAGGGCATTG | + |
Preference number: 2 (lower is better) Translates to: SVWEPVLSKSLIFES*NQASGPESSKSRAL Trigger: CAATGCCCTGGATTTAGAGCTCTCTGGGCCAGAAGCCTGATTCAAGGATTCAAATATCAGTGATTTGCTGAGGACAGGCTCCCAGACAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | ACCTTTCCATTCCTTAAGGGATTAGAGCTGAAGGCACGCCTCCTTGTCCATCACGTGAAAAGACCCATGTaGGAAGAGCCTTATTCCCCT | + |
Preference number: 2 (lower is better) Translates to: TFPFLKGLELKARLLVHHVKRPM*EEPYSP Trigger: AGGGGAATAAGGCTCTTCTCACATGGGTCTTTTCAC...GTGATGGACAAGGAGGCGTGCCTTCAGCTCTAATCCCTTAAGGAATGGAAAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | ACCTTTCCATTCCTTAAGGGATTAGAGCTGAAGGCACGCCTCCTTGTCCATCACAATCTAGGGCTTCTGTaGTGGCCATCAACAACATGC | + |
Preference number: 2 (lower is better) Translates to: TFPFLKGLELKARLLVHHNLGLL*WPSTTC Trigger: GCATGTTGTTGATGGCCATCACAGAAGCCCTAGATT...GTGATGGACAAGGAGGCGTGCCTTCAGCTCTAATCCCTTAAGGAATGGAAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | ACCTTTCCATTCCTTAAGGGATTAGAGCTGAAGGCACGCCTCCTTGTCCATCACCCGAGGTCTCTTCCTTaGAATGGAGCAGTTAAAGGT | + |
Preference number: 2 (lower is better) Translates to: TFPFLKGLELKARLLVHHPRSLP*NGAVKG Trigger: ACCTTTAACTGCTCCATTTCAAGGAAGAGACCTCGG...GTGATGGACAAGGAGGCGTGCCTTCAGCTCTAATCCCTTAAGGAATGGAAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAATCCTCCCTCAGTGACTaGCAGCACAGAGGGCTGCAG | + |
Preference number: 2 (lower is better) Translates to: LSPRISLLQGTTSLIFRKSSLSD*QHRGLQ Trigger: CTGCAGCCCTCTGTGCTGTCAGTCACTGAGGGAGGA...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GTAATGTTGCATTACCAGAAGTGGAGGGCAGTTTCTTCTTGCCTTTGTTCAGATAACTTCCTCCCTCAGTaGCTGACAGCACAGAGGGCT | + |
Preference number: 2 (lower is better) Translates to: VMLHYQKWRAVSSCLCSDNFLPQ*LTAQRA Trigger: AGCCCTCTGTGCTGTCAGTCACTGAGGGAGGAAGTT...ATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GTAATGTTGCATTACCAGAAGTGGAGGGCAGTTTCTTCTTGCCTTTGTTCAGATTCACTGAGGACACACTaGGCAGACACTGGTGTCTCC | + |
Preference number: 2 (lower is better) Translates to: VMLHYQKWRAVSSCLCSDSLRTH*ADTGVS Trigger: GGAGACACCAGTGTCTGCTCAGTGTGTCCTCAGTGA...ATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR GCA 90 bp | ACCTTTCCATTCCTTAAGGGATTAGAGCTGAAGGCACGCCTCCTTGTCCATCACTGGCCATCAACAACATaGAACACTGTAACTACGCTC | + |
Preference number: 2 (lower is better) Translates to: TFPFLKGLELKARLLVHHWPSTT*NTVTTL Trigger: GAGCGTAGTTACAGTGTTGCATGTTGTTGATGGCCA...GTGATGGACAAGGAGGCGTGCCTTCAGCTCTAATCCCTTAAGGAATGGAAAGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GGAATACCCTGTCCTCCCTATGTACCATTAAAGATGTCTTCAGTTTCTTCCCACCCAGAAATGCAGTGGTaGTTAAAGAGGAGGCTCTGC | + |
Preference number: 2 (lower is better) Translates to: GIPCPPYVPLKMSSVSSHPEMQW*LKRRLC Trigger: GCAGAGCCTCCTCTTTAATCACCACTGCATTTCTGG...GTGGGAAGAAACTGAAGACATCTTTAATGGTACATAGGGAGGACAGGGTATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | CATGGCAAGAGCTCCCGTACACATGGAGTAAAAGAAACACTTTTCCATAGCTCTGTGAAAAGACCCATGTaGGAAGAGCCTTATTCCCCT | + |
Preference number: 2 (lower is better) Translates to: HGKSSRTHGVKETLFHSSVKRPM*EEPYSP Trigger: AGGGGAATAAGGCTCTTCTCACATGGGTCTTTTCAC...AGAGCTATGGAAAAGTGTTTCTTTTACTCCATGTGTACGGGAGCTCTTGCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GGAATACCCTGTCCTCCCTATGTACCATTAAAGATGTCTTCAGTTTCTTCCCACAATCTAGGGCTTCTGTaGTGGCCATCAACAACATGC | + |
Preference number: 2 (lower is better) Translates to: GIPCPPYVPLKMSSVSSHNLGLL*WPSTTC Trigger: GCATGTTGTTGATGGCCATCACAGAAGCCCTAGATT...GTGGGAAGAAACTGAAGACATCTTTAATGGTACATAGGGAGGACAGGGTATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | CATGGCAAGAGCTCCCGTACACATGGAGTAAAAGAAACACTTTTCCATAGCTCTCCGAGGTCTCTTCCTTaGAATGGAGCAGTTAAAGGT | + |
Preference number: 2 (lower is better) Translates to: HGKSSRTHGVKETLFHSSPRSLP*NGAVKG Trigger: ACCTTTAACTGCTCCATTTCAAGGAAGAGACCTCGG...AGAGCTATGGAAAAGTGTTTCTTTTACTCCATGTGTACGGGAGCTCTTGCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | ACCTTTCCATTCCTTAAGGGATTAGAGCTGAAGGCACGCCTCCTTGTCCATCACCATTATAATCACTGCTaGATAATGCAGACCTCTGGA | + |
Preference number: 2 (lower is better) Translates to: TFPFLKGLELKARLLVHHHYNHC*IMQTSG Trigger: TCCAGAGGTCTGCATTATTCAGCAGTGATTATAATG...GTGATGGACAAGGAGGCGTGCCTTCAGCTCTAATCCCTTAAGGAATGGAAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAAAACTTCCTCCCTCAGTaGCTGACAGCACAGAGGGCT | + |
Preference number: 2 (lower is better) Translates to: LSPRISLLQGTTSLIFRKNFLPQ*LTAQRA Trigger: AGCCCTCTGTGCTGTCAGTCACTGAGGGAGGAAGTT...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | ACCTTTCCATTCCTTAAGGGATTAGAGCTGAAGGCACGCCTCCTTGTCCATCACATCTTTCTCAGAAGATaGGTGAAGCTCACCTATGTA | + |
Preference number: 2 (lower is better) Translates to: TFPFLKGLELKARLLVHHIFLRR*VKLTYV Trigger: TACATAGGTGAGCTTCACCCATCTTCTGAGAAAGAT...GTGATGGACAAGGAGGCGTGCCTTCAGCTCTAATCCCTTAAGGAATGGAAAGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | CCCACATCACTCTCCTCTGAACACAGGAAGATCTTTCAGTTTCATCAGTTTCCAACTCTAGTGTCCCAGTaGTTTTTCAGCTCCATGCCA | + |
Preference number: 2 (lower is better) Translates to: PTSLSSEHRKIFQFHQFPTLVSQ*FFSSMP Trigger: TGGCATGGAGCTGAAAAACCACTGGGACACTAGAGT...TGGAAACTGATGAAACTGAAAGATCTTCCTGTGTTCAGAGGAGAGTGATGTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GTAATGTTGCATTACCAGAAGTGGAGGGCAGTTTCTTCTTGCCTTTGTTCAGATGTGAAAAGACCCATGTaGGAAGAGCCTTATTCCCCT | + |
Preference number: 2 (lower is better) Translates to: VMLHYQKWRAVSSCLCSDVKRPM*EEPYSP Trigger: AGGGGAATAAGGCTCTTCTCACATGGGTCTTTTCAC...ATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GTAATGTTGCATTACCAGAAGTGGAGGGCAGTTTCTTCTTGCCTTTGTTCAGATAATCTAGGGCTTCTGTaGTGGCCATCAACAACATGC | + |
Preference number: 2 (lower is better) Translates to: VMLHYQKWRAVSSCLCSDNLGLL*WPSTTC Trigger: GCATGTTGTTGATGGCCATCACAGAAGCCCTAGATT...ATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAAAGTTCAGCTAGAGCTTaGGAAGAGCTGTGGGACCTC | + |
Preference number: 2 (lower is better) Translates to: LSPRISLLQGTTSLIFRKSSARA*EELWDL Trigger: GAGGTCCCACAGCTCTTCTCAAGCTCTAGCTGAACT...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR GCA 90 bp | CTTAGAAAATATTCCCTCATCCAAGGCTCAGGGAATAGTAAAGAAGATGGTGGGCTGAAGAAGGATTACTaGACTGTGCATGGCAGCATG | + |
Preference number: 2 (lower is better) Translates to: LRKYSLIQGSGNSKEDGGLKKDY*TVHGSM Trigger: CATGCTGCCATGCACAGTGCAGTAATCCTTCTTCAG...CCCACCATCTTCTTTACTATTCCCTGAGCCTTGGATGAGGGAATATTTTCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR GCA 90 bp | GTAATGTTGCATTACCAGAAGTGGAGGGCAGTTTCTTCTTGCCTTTGTTCAGATCTGAAGAAGGATTACTaGACTGTGCATGGCAGCATG | + |
Preference number: 2 (lower is better) Translates to: VMLHYQKWRAVSSCLCSDLKKDY*TVHGSM Trigger: CATGCTGCCATGCACAGTGCAGTAATCCTTCTTCAG...ATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | GGAATACCCTGTCCTCCCTATGTACCATTAAAGATGTCTTCAGTTTCTTCCCACCTGTGCATGGCAGCATaGAAGGAAGAAAGCTTGAAA | + |
Preference number: 2 (lower is better) Translates to: GIPCPPYVPLKMSSVSSHLCMAA*KEESLK Trigger: TTTCAAGCTTTCTTCCTTCCATGCTGCCATGCACAG...GTGGGAAGAAACTGAAGACATCTTTAATGGTACATAGGGAGGACAGGGTATTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GGAATACCCTGTCCTCCCTATGTACCATTAAAGATGTCTTCAGTTTCTTCCCACAAGAAATCGATGTGGTaGCAGTGTGGTGAACATAGA | + |
Preference number: 2 (lower is better) Translates to: GIPCPPYVPLKMSSVSSHKKSMW*QCGEHR Trigger: TCTATGTTCACCACACTGTCACCACATCGATTTCTT...GTGGGAAGAAACTGAAGACATCTTTAATGGTACATAGGGAGGACAGGGTATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GTAATGTTGCATTACCAGAAGTGGAGGGCAGTTTCTTCTTGCCTTTGTTCAGATCTATTCAGGTGTGTGTaGACAGTGACAGTGTACTCA | + |
Preference number: 2 (lower is better) Translates to: VMLHYQKWRAVSSCLCSDLFRCV*TVTVYS Trigger: TGAGTACACTGTCACTGTTCACACACACCTGAATAG...ATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAACCAGAAATGCAGTGGTaGTTAAAGAGGAGGCTCTGC | + |
Preference number: 2 (lower is better) Translates to: LSPRISLLQGTTSLIFRKPEMQW*LKRRLC Trigger: GCAGAGCCTCCTCTTTAATCACCACTGCATTTCTGG...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR-3UTR TCA 90 bp | GTCTTCAGTTTCTTCCCACACAGAACTACCTCTAATTTATTGTTAAGGAGCACTAGTGGGAACCAACCTTaGCAAAACACCTGCAGCAAG | + |
Preference number: 2 (lower is better) Translates to: VFSFFPHRTTSNLLLRSTSGNQP*QNTCSK Trigger: CTTGCTGCAGGTGTTTTGTCAAGGTTGGTTCCCACT...AGTGCTCCTTAACAATAAATTAGAGGTAGTTCTGTGTGGGAAGAAACTGAAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR-3UTR GCA 90 bp | GGAGCCACAGCTATGCGTGTATACTGCTCCCTCCAATATATACAGAGAAACAAAAGACAAGAACTTGGATaGAGACAGTCAATGAGAGCA | + |
Preference number: 2 (lower is better) Translates to: GATAMRVYCSLQYIQRNKRQELG*RQSMRA Trigger: TGCTCTCATTGACTGTCTGCATCCAAGTTCTTGTCT...TTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR-3UTR GCA 90 bp | GTAATGTTGCATTACCAGAAGTGGAGGGCAGTTTCTTCTTGCCTTTGTTCAGATTGGCCATCAACAACATaGAACACTGTAACTACGCTC | + |
Preference number: 2 (lower is better) Translates to: VMLHYQKWRAVSSCLCSDWPSTT*NTVTTL Trigger: GAGCGTAGTTACAGTGTTGCATGTTGTTGATGGCCA...ATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR-3UTR GCA 90 bp | CATGGCAAGAGCTCCCGTACACATGGAGTAAAAGAAACACTTTTCCATAGCTCTGTGATAGTTATTGCATaGGCATTCAGGTGGAGGAAA | + |
Preference number: 2 (lower is better) Translates to: HGKSSRTHGVKETLFHSSVIVIA*AFRWRK Trigger: TTTCCTCCACCTGAATGCGCATGCAATAACTATCAC...AGAGCTATGGAAAAGTGTTTCTTTTACTCCATGTGTACGGGAGCTCTTGCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR-3UTR GCA 90 bp | AACGGCTCAGATAGAACTGCTCTTGTCAGTATGTTTGCTTTTGTGCATGCATTTGACAGCACAGAGGGCTaGAGTACTACTCAGTTTCTT | + |
Preference number: 2 (lower is better) Translates to: NGSDRTALVSMFAFVHAFDSTEG*STTQFL Trigger: AAGAAACTGAGTAGTACTGCAGCCCTCTGTGCTGTC...AAATGCATGCACAAAAGCAAACATACTGACAAGAGCAGTTCTATCTGAGCCGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR-3UTR CCA 90 bp | GGAATACCCTGTCCTCCCTATGTACCATTAAAGATGTCTTCAGTTTCTTCCCACGTCAAGACAAGAACTTaGATGCAGACAGTCAATGAG | + |
Preference number: 2 (lower is better) Translates to: GIPCPPYVPLKMSSVSSHVKTRT*MQTVNE Trigger: CTCATTGACTGTCTGCATCCAAGTTCTTGTCTTGAC...GTGGGAAGAAACTGAAGACATCTTTAATGGTACATAGGGAGGACAGGGTATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR-3UTR CCA 90 bp | CATGGCAAGAGCTCCCGTACACATGGAGTAAAAGAAACACTTTTCCATAGCTCTGTCAAGACAAGAACTTaGATGCAGACAGTCAATGAG | + |
Preference number: 2 (lower is better) Translates to: HGKSSRTHGVKETLFHSSVKTRT*MQTVNE Trigger: CTCATTGACTGTCTGCATCCAAGTTCTTGTCTTGAC...AGAGCTATGGAAAAGTGTTTCTTTTACTCCATGTGTACGGGAGCTCTTGCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR-3UTR CCA 90 bp | TTCTGTCGAGGTCTCCTCTACTTTGGTAACCCAGTTTCCTTCACTTACTTTTTCCTGTGCATGGCAGCATaGAAGGAAGAAAGCTTGAAA | + |
Preference number: 2 (lower is better) Translates to: FCRGLLYFGNPVSFTYFFLCMAA*KEESLK Trigger: TTTCAAGCTTTCTTCCTTCCATGCTGCCATGCACAG...GAAAAAGTAAGTGAAGGAAACTGGGTTACCAAAGTAGAGGAGACCTCGACAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR-3UTR CCA 90 bp | CCCACATCACTCTCCTCTGAACACAGGAAGATCTTTCAGTTTCATCAGTTTCCAGCATGCGCATTCAGGTaGAGGAAACAATTCAATGTA | + |
Preference number: 2 (lower is better) Translates to: PTSLSSEHRKIFQFHQFPACAFR*RKQFNV Trigger: TACATTGAATTGTTTCCTCCACCTGAATGCGCATGC...TGGAAACTGATGAAACTGAAAGATCTTCCTGTGTTCAGAGGAGAGTGATGTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR-3UTR CCA 90 bp | GGAGCCACAGCTATGCGTGTATACTGCTCCCTCCAATATATACAGAGAAACAAAGCATGCGCATTCAGGTaGAGGAAACAATTCAATGTA | + |
Preference number: 2 (lower is better) Translates to: GATAMRVYCSLQYIQRNKACAFR*RKQFNV Trigger: TACATTGAATTGTTTCCTCCACCTGAATGCGCATGC...TTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR-3UTR TCA 90 bp | CCCACATCACTCTCCTCTGAACACAGGAAGATCTTTCAGTTTCATCAGTTTCCAATCAAAACACAATGGTaGAAAGACCCATGTGAGAAG | + |
Preference number: 2 (lower is better) Translates to: PTSLSSEHRKIFQFHQFPIKTQW*KDPCEK Trigger: CTTCTCACATGGGTCTTTTCACCATTGTGTTTTGAT...TGGAAACTGATGAAACTGAAAGATCTTCCTGTGTTCAGAGGAGAGTGATGTGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAAAATCTAGGGCTTCTGTaGTGGCCATCAACAACATGC | + |
Preference number: 2 (lower is better) Translates to: LSPRISLLQGTTSLIFRKNLGLL*WPSTTC Trigger: GCATGTTGTTGATGGCCATCACAGAAGCCCTAGATT...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | CATGGCAAGAGCTCCCGTACACATGGAGTAAAAGAAACACTTTTCCATAGCTCTGTAAAGAATGGAAGATaGGTTATAACCAGGGAAGGA | + |
Preference number: 2 (lower is better) Translates to: HGKSSRTHGVKETLFHSSVKNGR*VITREG Trigger: TCCTTCCCTGGTTATAACTCATCTTCCATTCTTTAC...AGAGCTATGGAAAAGTGTTTCTTTTACTCCATGTGTACGGGAGCTCTTGCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GGAATACCCTGTCCTCCCTATGTACCATTAAAGATGTCTTCAGTTTCTTCCCACGTAAAGAATGGAAGATaGGTTATAACCAGGGAAGGA | + |
Preference number: 2 (lower is better) Translates to: GIPCPPYVPLKMSSVSSHVKNGR*VITREG Trigger: TCCTTCCCTGGTTATAACTCATCTTCCATTCTTTAC...GTGGGAAGAAACTGAAGACATCTTTAATGGTACATAGGGAGGACAGGGTATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | AACGGCTCAGATAGAACTGCTCTTGTCAGTATGTTTGCTTTTGTGCATGCATTTGGAAGGAAGAAAGCTTaGAAAGCTTCTACCCTACAC | + |
Preference number: 2 (lower is better) Translates to: NGSDRTALVSMFAFVHAFGRKKA*KASTLH Trigger: GTGTAGGGTAGAAGCTTTTCAAGCTTTCTTCCTTCC...AAATGCATGCACAAAAGCAAACATACTGACAAGAGCAGTTCTATCTGAGCCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GATCTTAATTCAGGATGTTTTTCAACACTACAGACTCCAAAACAACTTCCTCCCCCGAGGTCTCTTCCTTaGAATGGAGCAGTTAAAGGT | + |
Preference number: 2 (lower is better) Translates to: DLNSGCFSTLQTPKQLPPPRSLP*NGAVKG Trigger: ACCTTTAACTGCTCCATTTCAAGGAAGAGACCTCGG...GGGAGGAAGTTGTTTTGGAGTCTGTAGTGTTGAAAAACATCCTGAATTAAGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GGAGCCACAGCTATGCGTGTATACTGCTCCCTCCAATATATACAGAGAAACAAAAGTCAGACTTGGTGTTaGACAGAATTTAAAGGAGTG | + |
Preference number: 2 (lower is better) Translates to: GATAMRVYCSLQYIQRNKSQTWC*TEFKGV Trigger: CACTCCTTTAAATTCTGTTCAACACCAAGTCTGACT...TTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR GCA 90 bp | GTAATGTTGCATTACCAGAAGTGGAGGGCAGTTTCTTCTTGCCTTTGTTCAGATAGACAAGAACTTGGATaGAGACAGTCAATGAGAGCA | + |
Preference number: 2 (lower is better) Translates to: VMLHYQKWRAVSSCLCSDRQELG*RQSMRA Trigger: TGCTCTCATTGACTGTCTGCATCCAAGTTCTTGTCT...ATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | AACGGCTCAGATAGAACTGCTCTTGTCAGTATGTTTGCTTTTGTGCATGCATTTCTGTGCATGGCAGCATaGAAGGAAGAAAGCTTGAAA | + |
Preference number: 2 (lower is better) Translates to: NGSDRTALVSMFAFVHAFLCMAA*KEESLK Trigger: TTTCAAGCTTTCTTCCTTCCATGCTGCCATGCACAG...AAATGCATGCACAAAAGCAAACATACTGACAAGAGCAGTTCTATCTGAGCCGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | GTAATGTTGCATTACCAGAAGTGGAGGGCAGTTTCTTCTTGCCTTTGTTCAGATGCATGCGCATTCAGGTaGAGGAAACAATTCAATGTA | + |
Preference number: 2 (lower is better) Translates to: VMLHYQKWRAVSSCLCSDACAFR*RKQFNV Trigger: TACATTGAATTGTTTCCTCCACCTGAATGCGCATGC...ATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | CATGGCAAGAGCTCCCGTACACATGGAGTAAAAGAAACACTTTTCCATAGCTCTATCTTTCTCAGAAGATaGGTGAAGCTCACCTATGTA | + |
Preference number: 2 (lower is better) Translates to: HGKSSRTHGVKETLFHSSIFLRR*VKLTYV Trigger: TACATAGGTGAGCTTCACCCATCTTCTGAGAAAGAT...AGAGCTATGGAAAAGTGTTTCTTTTACTCCATGTGTACGGGAGCTCTTGCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | CATGGCAAGAGCTCCCGTACACATGGAGTAAAAGAAACACTTTTCCATAGCTCTCTAGCAACCACACGATaGTTAACAACCATCTGTAAT | + |
Preference number: 2 (lower is better) Translates to: HGKSSRTHGVKETLFHSSLATTR*LTTICN Trigger: ATTACAGATGGTTGTTAACCATCGTGTGGTTGCTAG...AGAGCTATGGAAAAGTGTTTCTTTTACTCCATGTGTACGGGAGCTCTTGCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GTAATGTTGCATTACCAGAAGTGGAGGGCAGTTTCTTCTTGCCTTTGTTCAGATTGCAACAGTAATCTGTaGTATTCCAAATCCCAACCA | + |
Preference number: 2 (lower is better) Translates to: VMLHYQKWRAVSSCLCSDCNSNL*YSKSQP Trigger: TGGTTGGGATTTGGAATATCACAGATTACTGTTGCA...ATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | CTTAGAAAATATTCCCTCATCCAAGGCTCAGGGAATAGTAAAGAAGATGGTGGGGTAAAGAATGGAAGATaGGTTATAACCAGGGAAGGA | + |
Preference number: 2 (lower is better) Translates to: LRKYSLIQGSGNSKEDGGVKNGR*VITREG Trigger: TCCTTCCCTGGTTATAACTCATCTTCCATTCTTTAC...CCCACCATCTTCTTTACTATTCCCTGAGCCTTGGATGAGGGAATATTTTCTAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GTCTTCAGTTTCTTCCCACACAGAACTACCTCTAATTTATTGTTAAGGAGCACTGGAAGGAAGAAAGCTTaGAAAGCTTCTACCCTACAC | + |
Preference number: 2 (lower is better) Translates to: VFSFFPHRTTSNLLLRSTGRKKA*KASTLH Trigger: GTGTAGGGTAGAAGCTTTTCAAGCTTTCTTCCTTCC...AGTGCTCCTTAACAATAAATTAGAGGTAGTTCTGTGTGGGAAGAAACTGAAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GATCTTAATTCAGGATGTTTTTCAACACTACAGACTCCAAAACAACTTCCTCCCGGAAGGAAGAAAGCTTaGAAAGCTTCTACCCTACAC | + |
Preference number: 2 (lower is better) Translates to: DLNSGCFSTLQTPKQLPPGRKKA*KASTLH Trigger: GTGTAGGGTAGAAGCTTTTCAAGCTTTCTTCCTTCC...GGGAGGAAGTTGTTTTGGAGTCTGTAGTGTTGAAAAACATCCTGAATTAAGATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GTAATGTTGCATTACCAGAAGTGGAGGGCAGTTTCTTCTTGCCTTTGTTCAGATCATTATAATCACTGCTaGATAATGCAGACCTCTGGA | + |
Preference number: 2 (lower is better) Translates to: VMLHYQKWRAVSSCLCSDHYNHC*IMQTSG Trigger: TCCAGAGGTCTGCATTATTCAGCAGTGATTATAATG...ATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GTCTTCAGTTTCTTCCCACACAGAACTACCTCTAATTTATTGTTAAGGAGCACTAAGGCTTTCCTATGCTaGGCTTGCTGTAGTTCCTTT | + |
Preference number: 2 (lower is better) Translates to: VFSFFPHRTTSNLLLRSTKAFLC*ACCSSF Trigger: AAAGGAACTACAGCAAGCTCAGCATAGGAAAGCCTT...AGTGCTCCTTAACAATAAATTAGAGGTAGTTCTGTGTGGGAAGAAACTGAAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR GCA 90 bp | GATCTTAATTCAGGATGTTTTTCAACACTACAGACTCCAAAACAACTTCCTCCCTGGCCATCAACAACATaGAACACTGTAACTACGCTC | + |
Preference number: 2 (lower is better) Translates to: DLNSGCFSTLQTPKQLPPWPSTT*NTVTTL Trigger: GAGCGTAGTTACAGTGTTGCATGTTGTTGATGGCCA...GGGAGGAAGTTGTTTTGGAGTCTGTAGTGTTGAAAAACATCCTGAATTAAGATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | GGAATACCCTGTCCTCCCTATGTACCATTAAAGATGTCTTCAGTTTCTTCCCACAATAATGCTGATTACTaGCTTCATTCTAGTCTGTGC | + |
Preference number: 2 (lower is better) Translates to: GIPCPPYVPLKMSSVSSHNNADY*LHSSLC Trigger: GCACAGACTAGAATGAAGCCAGTAATCAGCATTATT...GTGGGAAGAAACTGAAGACATCTTTAATGGTACATAGGGAGGACAGGGTATTCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | GTCTTCAGTTTCTTCCCACACAGAACTACCTCTAATTTATTGTTAAGGAGCACTCTGTGCATGGCAGCATaGAAGGAAGAAAGCTTGAAA | + |
Preference number: 2 (lower is better) Translates to: VFSFFPHRTTSNLLLRSTLCMAA*KEESLK Trigger: TTTCAAGCTTTCTTCCTTCCATGCTGCCATGCACAG...AGTGCTCCTTAACAATAAATTAGAGGTAGTTCTGTGTGGGAAGAAACTGAAGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | ACAATTCAATGTATTCTCTTAGAAAATATTCCCTCATCCAAGGCTCAGGGAATAGTGAAAAGACCCATGTaGGAAGAGCCTTATTCCCCT | + |
Preference number: 2 (lower is better) Translates to: TIQCILLENIPSSKAQGIVKRPM*EEPYSP Trigger: AGGGGAATAAGGCTCTTCTCACATGGGTCTTTTCAC...TATTCCCTGAGCCTTGGATGAGGGAATATTTTCTAAGAGAATACATTGAATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GATCTTAATTCAGGATGTTTTTCAACACTACAGACTCCAAAACAACTTCCTCCCAAGAAATCGATGTGGTaGCAGTGTGGTGAACATAGA | + |
Preference number: 2 (lower is better) Translates to: DLNSGCFSTLQTPKQLPPKKSMW*QCGEHR Trigger: TCTATGTTCACCACACTGTCACCACATCGATTTCTT...GGGAGGAAGTTGTTTTGGAGTCTGTAGTGTTGAAAAACATCCTGAATTAAGATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR GCA 90 bp | ACAATTCAATGTATTCTCTTAGAAAATATTCCCTCATCCAAGGCTCAGGGAATACTGAAGAAGGATTACTaGACTGTGCATGGCAGCATG | + |
Preference number: 2 (lower is better) Translates to: TIQCILLENIPSSKAQGILKKDY*TVHGSM Trigger: CATGCTGCCATGCACAGTGCAGTAATCCTTCTTCAG...TATTCCCTGAGCCTTGGATGAGGGAATATTTTCTAAGAGAATACATTGAATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR GCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAAGTGATAGTTATTGCATaGGCATTCAGGTGGAGGAAA | + |
Preference number: 2 (lower is better) Translates to: LSPRISLLQGTTSLIFRKVIVIA*AFRWRK Trigger: TTTCCTCCACCTGAATGCGCATGCAATAACTATCAC...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | GGAGCCACAGCTATGCGTGTATACTGCTCCCTCCAATATATACAGAGAAACAAAATTTGCCTCTATAATTaGCATTATATTAGGCAGTGC | + |
Preference number: 2 (lower is better) Translates to: GATAMRVYCSLQYIQRNKICLYN*HYIRQC Trigger: GCACTGCCTAATATAATGCCAATTATAGAGGCAAAT...TTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | AACGGCTCAGATAGAACTGCTCTTGTCAGTATGTTTGCTTTTGTGCATGCATTTGTCAATGAGAGCACATaGAATAATGCTGATTACTGG | + |
Preference number: 2 (lower is better) Translates to: NGSDRTALVSMFAFVHAFVNEST*NNADYW Trigger: CCAGTAATCAGCATTATTCCATGTGCTCTCATTGAC...AAATGCATGCACAAAAGCAAACATACTGACAAGAGCAGTTCTATCTGAGCCGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | GTCTTCAGTTTCTTCCCACACAGAACTACCTCTAATTTATTGTTAAGGAGCACTGTCAAGACAAGAACTTaGATGCAGACAGTCAATGAG | + |
Preference number: 2 (lower is better) Translates to: VFSFFPHRTTSNLLLRSTVKTRT*MQTVNE Trigger: CTCATTGACTGTCTGCATCCAAGTTCTTGTCTTGAC...AGTGCTCCTTAACAATAAATTAGAGGTAGTTCTGTGTGGGAAGAAACTGAAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | CATGGCAAGAGCTCCCGTACACATGGAGTAAAAGAAACACTTTTCCATAGCTCTATCTCCTGTAAAGAATaGAAGATGAGTTATAACCAG | + |
Preference number: 2 (lower is better) Translates to: HGKSSRTHGVKETLFHSSISCKE*KMSYNQ Trigger: CTGGTTATAACTCATCTTCCATTCTTTACAGGAGAT...AGAGCTATGGAAAAGTGTTTCTTTTACTCCATGTGTACGGGAGCTCTTGCCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | GGAGCCACAGCTATGCGTGTATACTGCTCCCTCCAATATATACAGAGAAACAAAATCTCCTGTAAAGAATaGAAGATGAGTTATAACCAG | + |
Preference number: 2 (lower is better) Translates to: GATAMRVYCSLQYIQRNKISCKE*KMSYNQ Trigger: CTGGTTATAACTCATCTTCCATTCTTTACAGGAGAT...TTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR-3UTR CCA 90 bp | GTCTTCAGTTTCTTCCCACACAGAACTACCTCTAATTTATTGTTAAGGAGCACTGCATGCGCATTCAGGTaGAGGAAACAATTCAATGTA | + |
Preference number: 2 (lower is better) Translates to: VFSFFPHRTTSNLLLRSTACAFR*RKQFNV Trigger: TACATTGAATTGTTTCCTCCACCTGAATGCGCATGC...AGTGCTCCTTAACAATAAATTAGAGGTAGTTCTGTGTGGGAAGAAACTGAAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR-3UTR CCA 90 bp | GGAATACCCTGTCCTCCCTATGTACCATTAAAGATGTCTTCAGTTTCTTCCCACAATGTGTTTCTATCCTaGAGCATAAAGAAATCGATG | + |
Preference number: 2 (lower is better) Translates to: GIPCPPYVPLKMSSVSSHNVFLS*SIKKSM Trigger: CATCGATTTCTTTATGCTCCAGGATAGAAACACATT...GTGGGAAGAAACTGAAGACATCTTTAATGGTACATAGGGAGGACAGGGTATTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR-3UTR CCA 90 bp | GGAGCCACAGCTATGCGTGTATACTGCTCCCTCCAATATATACAGAGAAACAAATTTGCAGTATCTTTGTaGTCTGTGTTTAGCCTTAAT | + |
Preference number: 2 (lower is better) Translates to: GATAMRVYCSLQYIQRNKFAVSL*SVFSLN Trigger: ATTAAGGCTAAACACAGACCACAAAGATACTGCAAA...TTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | GGAGCCACAGCTATGCGTGTATACTGCTCCCTCCAATATATACAGAGAAACAAACTAAGGGAAACAACTTaGAATACACAGAATGTATCA | + |
Preference number: 2 (lower is better) Translates to: GATAMRVYCSLQYIQRNKLRETT*NTQNVS Trigger: TGATACATTCTGTGTATTCCAAGTTGTTTCCCTTAG...TTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GATCTTAATTCAGGATGTTTTTCAACACTACAGACTCCAAAACAACTTCCTCCCTGCAACAGTAATCTGTaGTATTCCAAATCCCAACCA | + |
Preference number: 2 (lower is better) Translates to: DLNSGCFSTLQTPKQLPPCNSNL*YSKSQP Trigger: TGGTTGGGATTTGGAATATCACAGATTACTGTTGCA...GGGAGGAAGTTGTTTTGGAGTCTGTAGTGTTGAAAAACATCCTGAATTAAGATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR-3UTR TCA 90 bp | TTACCCACCTGTTATCAATGTGTCACTTGGAATGTCTTCAATTATACATTTCTCGGAAGGAAGAAAGCTTaGAAAGCTTCTACCCTACAC | + |
Preference number: 2 (lower is better) Translates to: LPTCYQCVTWNVFNYTFLGRKKA*KASTLH Trigger: GTGTAGGGTAGAAGCTTTTCAAGCTTTCTTCCTTCC...GAGAAATGTATAATTGAAGACATTCCAAGTGACACATTGATAACAGGTGGGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR TCA 90 bp | GATCTTAATTCAGGATGTTTTTCAACACTACAGACTCCAAAACAACTTCCTCCCCAGAGATTTTCTACTTaGGGAAATATGACAGCCCTA | + |
Preference number: 2 (lower is better) Translates to: DLNSGCFSTLQTPKQLPPQRFST*GNMTAL Trigger: TAGGGCTGTCATATTTCCTCAAGTAGAAAATCTCTG...GGGAGGAAGTTGTTTTGGAGTCTGTAGTGTTGAAAAACATCCTGAATTAAGATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR-3UTR TCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAAAGTCAGACTTGGTGTTaGACAGAATTTAAAGGAGTG | + |
Preference number: 2 (lower is better) Translates to: LSPRISLLQGTTSLIFRKSQTWC*TEFKGV Trigger: CACTCCTTTAAATTCTGTTCAACACCAAGTCTGACT...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR-3UTR CCA 90 bp | AACGGCTCAGATAGAACTGCTCTTGTCAGTATGTTTGCTTTTGTGCATGCATTTAATAATGCTGATTACTaGCTTCATTCTAGTCTGTGC | + |
Preference number: 2 (lower is better) Translates to: NGSDRTALVSMFAFVHAFNNADY*LHSSLC Trigger: GCACAGACTAGAATGAAGCCAGTAATCAGCATTATT...AAATGCATGCACAAAAGCAAACATACTGACAAGAGCAGTTCTATCTGAGCCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR-3UTR CCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAACTAGCAACCACACGATaGTTAACAACCATCTGTAAT | + |
Preference number: 2 (lower is better) Translates to: LSPRISLLQGTTSLIFRKLATTR*LTTICN Trigger: ATTACAGATGGTTGTTAACCATCGTGTGGTTGCTAG...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR GCA 90 bp | TTACCCACCTGTTATCAATGTGTCACTTGGAATGTCTTCAATTATACATTTCTCAGACAAGAACTTGGATaGAGACAGTCAATGAGAGCA | + |
Preference number: 2 (lower is better) Translates to: LPTCYQCVTWNVFNYTFLRQELG*RQSMRA Trigger: TGCTCTCATTGACTGTCTGCATCCAAGTTCTTGTCT...GAGAAATGTATAATTGAAGACATTCCAAGTGACACATTGATAACAGGTGGGTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR-3UTR GCA 90 bp | CTCAGGAACTGTTATCAATGTGTCACTTGGAATGTCTTCAATTATACATTTCTCGTGATAGTTATTGCATaGGCATTCAGGTGGAGGAAA | + |
Preference number: 2 (lower is better) Translates to: LRNCYQCVTWNVFNYTFLVIVIA*AFRWRK Trigger: TTTCCTCCACCTGAATGCGCATGCAATAACTATCAC...GAGAAATGTATAATTGAAGACATTCCAAGTGACACATTGATAACAGTTCCTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233198.2 ENSMUST00000233547.2 |
||
3UTR-3UTR CCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAAAATAATGCTGATTACTaGCTTCATTCTAGTCTGTGC | + |
Preference number: 2 (lower is better) Translates to: LSPRISLLQGTTSLIFRKNNADY*LHSSLC Trigger: GCACAGACTAGAATGAAGCCAGTAATCAGCATTATT...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 38% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | CATGATCATATATACACTATGGAAAGCTCAGGAACTGTTATCAATGTGTCACTTGTCAAGACAAGAACTTaGATGCAGACAGTCAATGAG | + |
Preference number: 2 (lower is better) Translates to: HDHIYTMESSGTVINVSLVKTRT*MQTVNE Trigger: CTCATTGACTGTCTGCATCCAAGTTCTTGTCTTGAC...AAGTGACACATTGATAACAGTTCCTGAGCTTTCCATAGTGTATATATGATCATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233198.2 ENSMUST00000233547.2 |
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3UTR-3UTR TCA 90 bp | CATGATCATATATACACTATGGAAAGCTCAGGAACTGTTATCAATGTGTCACTTTGCAACAGTAATCTGTaGTATTCCAAATCCCAACCA | + |
Preference number: 2 (lower is better) Translates to: HDHIYTMESSGTVINVSLCNSNL*YSKSQP Trigger: TGGTTGGGATTTGGAATATCACAGATTACTGTTGCA...AAGTGACACATTGATAACAGTTCCTGAGCTTTCCATAGTGTATATATGATCATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233198.2 ENSMUST00000233547.2 |
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3UTR-3UTR TCA 90 bp | ACAATTCAATGTATTCTCTTAGAAAATATTCCCTCATCCAAGGCTCAGGGAATATGCAACAGTAATCTGTaGTATTCCAAATCCCAACCA | + |
Preference number: 2 (lower is better) Translates to: TIQCILLENIPSSKAQGICNSNL*YSKSQP Trigger: TGGTTGGGATTTGGAATATCACAGATTACTGTTGCA...TATTCCCTGAGCCTTGGATGAGGGAATATTTTCTAAGAGAATACATTGAATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR-3UTR TCA 90 bp | ACAATTCAATGTATTCTCTTAGAAAATATTCCCTCATCCAAGGCTCAGGGAATAGTAAAGAATGGAAGATaGGTTATAACCAGGGAAGGA | + |
Preference number: 2 (lower is better) Translates to: TIQCILLENIPSSKAQGIVKNGR*VITREG Trigger: TCCTTCCCTGGTTATAACTCATCTTCCATTCTTTAC...TATTCCCTGAGCCTTGGATGAGGGAATATTTTCTAAGAGAATACATTGAATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR GCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAATGTCTTAGATTCTGTTaGTGTATCAAAACACAATGG | + |
Preference number: 2 (lower is better) Translates to: LSPRISLLQGTTSLIFRKCLRFC*CIKTQW Trigger: CCATTGTGTTTTGATACAGCAACAGAATCTAAGACA...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR GCA 90 bp | GTCTTCAGTTTCTTCCCACACAGAACTACCTCTAATTTATTGTTAAGGAGCACTTGTCTTAGATTCTGTTaGTGTATCAAAACACAATGG | + |
Preference number: 2 (lower is better) Translates to: VFSFFPHRTTSNLLLRSTCLRFC*CIKTQW Trigger: CCATTGTGTTTTGATACAGCAACAGAATCTAAGACA...AGTGCTCCTTAACAATAAATTAGAGGTAGTTCTGTGTGGGAAGAAACTGAAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | GTCTTCAGTTTCTTCCCACACAGAACTACCTCTAATTTATTGTTAAGGAGCACTATTTGCCTCTATAATTaGCATTATATTAGGCAGTGC | + |
Preference number: 2 (lower is better) Translates to: VFSFFPHRTTSNLLLRSTICLYN*HYIRQC Trigger: GCACTGCCTAATATAATGCCAATTATAGAGGCAAAT...AGTGCTCCTTAACAATAAATTAGAGGTAGTTCTGTGTGGGAAGAAACTGAAGAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | CATGATCATATATACACTATGGAAAGCTCAGGAACTGTTATCAATGTGTCACTTGTCAATGAGAGCACATaGAATAATGCTGATTACTGG | + |
Preference number: 2 (lower is better) Translates to: HDHIYTMESSGTVINVSLVNEST*NNADYW Trigger: CCAGTAATCAGCATTATTCCATGTGCTCTCATTGAC...AAGTGACACATTGATAACAGTTCCTGAGCTTTCCATAGTGTATATATGATCATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233198.2 ENSMUST00000233547.2 |
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3UTR-3UTR CCA 90 bp | ACAATTCAATGTATTCTCTTAGAAAATATTCCCTCATCCAAGGCTCAGGGAATAGTCAATGAGAGCACATaGAATAATGCTGATTACTGG | + |
Preference number: 2 (lower is better) Translates to: TIQCILLENIPSSKAQGIVNEST*NNADYW Trigger: CCAGTAATCAGCATTATTCCATGTGCTCTCATTGAC...TATTCCCTGAGCCTTGGATGAGGGAATATTTTCTAAGAGAATACATTGAATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAATTTGCAGTATCTTTGTaGTCTGTGTTTAGCCTTAAT | + |
Preference number: 2 (lower is better) Translates to: LSPRISLLQGTTSLIFRKFAVSL*SVFSLN Trigger: ATTAAGGCTAAACACAGACCACAAAGATACTGCAAA...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CAA 90 bp | TGTAAAGAATGGAAGATGAGTTATAACCAGGGAAGGAAACAAATATaGGCCAGTTCGTACCAAATAATGAGCCATCAGAACATAAATACA | + |
Preference number: 2 (lower is better) Translates to: CKEWKMSYNQGRKQI*ASSYQIMSHQNINT Trigger: TGTATTTATGTTCTGATGGCTCATTATTTGGTACGAACTGGCCAATATTTGTTTCCTTCCCTGGTTATAACTCATCTTCCATTCTTTACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CCA 90 bp | CATGATCATATATACACTATGGAAAGCTCAGGAACTGTTATCAATGTGTCACTTATCTCCTGTAAAGAATaGAAGATGAGTTATAACCAG | + |
Preference number: 2 (lower is better) Translates to: HDHIYTMESSGTVINVSLISCKE*KMSYNQ Trigger: CTGGTTATAACTCATCTTCCATTCTTTACAGGAGAT...AAGTGACACATTGATAACAGTTCCTGAGCTTTCCATAGTGTATATATGATCATG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233198.2 ENSMUST00000233547.2 |
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3UTR-3UTR CCA 90 bp | CTCAGGAACTGTTATCAATGTGTCACTTGGAATGTCTTCAATTATACATTTCTCATCTCCTGTAAAGAATaGAAGATGAGTTATAACCAG | + |
Preference number: 2 (lower is better) Translates to: LRNCYQCVTWNVFNYTFLISCKE*KMSYNQ Trigger: CTGGTTATAACTCATCTTCCATTCTTTACAGGAGAT...GAGAAATGTATAATTGAAGACATTCCAAGTGACACATTGATAACAGTTCCTGAG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233198.2 ENSMUST00000233547.2 |
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3UTR GCA 72 bp | GGCTCTGCTGTTGGTCCTTTAGCACTGGGATTGTGGTaGCCTGGGCGTGGCTTCCCACATCACTCTCCTCTG | + |
Preference number: 3 (lower is better) Translates to: GSAVGPLALGLW*PGRGFPHHSPL Trigger: CAGAGGAGAGTGATGTGGGAAGCCACGCCCAGGGCACCACAATCCCAGTGCTAAAGGACCAACAGCAGAGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR CCA 72 bp | TGGTCCTTTAGCACTGGGATTGTGGTGCCCTGGGCGTaGCTTCCCACATCACTCTCCTCTGAACACAGGAAG | + |
Preference number: 3 (lower is better) Translates to: WSFSTGIVVPWA*LPTSLSSEHRK Trigger: CTTCCTGTGTTCAGAGGAGAGTGATGTGGGAAGCCACGCCCAGGGCACCACAATCCCAGTGCTAAAGGACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR CCA 72 bp | TGCTGTTGGTCCTTTAGCACTGGGATTGTGGTGCCCTaGGCGTGGCTTCCCACATCACTCTCCTCTGAACAC | + |
Preference number: 3 (lower is better) Translates to: CCWSFSTGIVVP*AWLPTSLSSEH Trigger: GTGTTCAGAGGAGAGTGATGTGGGAAGCCACGCCCAGGGCACCACAATCCCAGTGCTAAAGGACCAACAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR TCA 72 bp | TTTACCCAGGTATCCAGGTACTCACTGAGGACACACTaGGCAGACACTGGTGTCTCCTGTGTGCTAGGTCCA | + |
Preference number: 3 (lower is better) Translates to: FTQVSRYSLRTH*ADTGVSCVLGP Trigger: TGGACCTAGCACACAGGAGACACCAGTGTCTGCTCAGTGTGTCCTCAGTGAGTACCTGGATACCTGGGTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR TCA 72 bp | AAGAGGCTTTCGGCTGCCTGTAATTGCTGCTTCTCATaGTCTGATACCTTCTCTGGCCACAGCAGGGAGCCA | + |
Preference number: 3 (lower is better) Translates to: KRLSAACNCCFS*SDTFSGHSREP Trigger: TGGCTCCCTGCTGTGGCCAGAGAAGGTATCAGATCATGAGAAGCAGCAATTACAGGCAGCCGAAAGCCTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR TCA 72 bp | GGGAGGAGTAAATTTGGGGGAGGGGTCAGTCTAGACTaGGCAAACAACTCCTGGGACAGAGGTTTCCACACA | + |
Preference number: 3 (lower is better) Translates to: GRSKFGGGVSLD*ANNSWDRGFHT Trigger: TGTGTGGAAACCTCTGTCCCAGGAGTTGTTTGCTCAGTCTAGACTGACCCCTCCCCCAAATTTACTCCTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR GCA 72 bp | GTGTGTTTGCCATTCTCAGGAACAACTGGTTCTTGCTaGATCTTTCATGCTGAGGTTCTCCCAGGGCCTTGC | + |
Preference number: 3 (lower is better) Translates to: VCLPFSGTTGSC*IFHAEVLPGPC Trigger: GCAAGGCCCTGGGAGAACCTCAGCATGAAAGATGCAGCAAGAACCAGTTGTTCCTGAGAATGGCAAACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR TCA 72 bp | TGTCTGGGAGCCTGTCCTCAGCAAATCACTGATATTTaGATCCTTGAATCAGGCTTCTGGCCCAGAGAGCTC | + |
Preference number: 3 (lower is better) Translates to: CLGACPQQITDI*ILESGFWPREL Trigger: GAGCTCTCTGGGCCAGAAGCCTGATTCAAGGATTCAAATATCAGTGATTTGCTGAGGACAGGCTCCCAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR GCA 72 bp | GTTGTGTGTTTGCCATTCTCAGGAACAACTGGTTCTTaGTGCATCTTTCATGCTGAGGTTCTCCCAGGGCCT | + |
Preference number: 3 (lower is better) Translates to: VVCLPFSGTTGS*CIFHAEVLPGP Trigger: AGGCCCTGGGAGAACCTCAGCATGAAAGATGCAGCAAGAACCAGTTGTTCCTGAGAATGGCAAACACACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CCA 72 bp | ACTCCTGGGACAGAGGTTTCCACACACTTTCACCTGTaGGACAAGGTGCTTTGCCACAATTCTTTCAGCATG | + |
Preference number: 3 (lower is better) Translates to: TPGTEVSTHFHL*DKVLCHNSFSM Trigger: CATGCTGAAAGAATTGTGGCAAAGCACCTTGTCCCACAGGTGAAAGTGTGTGGAAACCTCTGTCCCAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR GCA 72 bp | CTTTGCATGTGGGCTTCAGGTATAGGAATGCTCACCTaGTTGGTCCCTCCATGTCTCTCACAGTCTTTTCTA | + |
Preference number: 3 (lower is better) Translates to: LCMWASGIGMLT*LVPPCLSQSFL Trigger: TAGAAAAGACTGTGAGAGACATGGAGGGACCAAGCAGGTGAGCATTCCTATACCTGAAGCCCACATGCAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR CAA 90 bp | ACCTTTCCATTCCTTAAGGGATTAGAGCTGAAGGCACGCCTCCTTGTCCATCACTGGAAGGAAGAAAGCTaGAAAAGCTTCTACCCTACA | + |
Preference number: 3 (lower is better) Translates to: TFPFLKGLELKARLLVHHWKEES*KSFYPT Trigger: TGTAGGGTAGAAGCTTTTCAAGCTTTCTTCCTTCCA...GTGATGGACAAGGAGGCGTGCCTTCAGCTCTAATCCCTTAAGGAATGGAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR TCA 72 bp | CTGCACTGTGCATGGCAGCATGGAAGGAAGAAAGCTTaGAAAGCTTCTACCCTACACAACCGTTTACAGAAG | + |
Preference number: 3 (lower is better) Translates to: LHCAWQHGRKKA*KASTLHNRLQK Trigger: CTTCTGTAAACGGTTGTGTAGGGTAGAAGCTTTTCAAGCTTTCTTCCTTCCATGCTGCCATGCACAGTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR GCA 72 bp | TGGCCACAGCAGGGAGCCACAGCTATGCGTGTATACTaGTCCCTCCAATATATACAGAGAAACAAAACCAAA | + |
Preference number: 3 (lower is better) Translates to: WPQQGATAMRVY*SLQYIQRNKTK Trigger: TTTGGTTTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCCCTGCTGTGGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CCA 72 bp | TGTGGGACAAGGTGCTTTGCCACAATTCTTTCAGCATaGCAAGAGCTCCCGTACACATGGAGTAAAAGAAAC | + |
Preference number: 3 (lower is better) Translates to: CGTRCFATILSA*QELPYTWSKRN Trigger: GTTTCTTTTACTCCATGTGTACGGGAGCTCTTGCCATGCTGAAAGAATTGTGGCAAAGCACCTTGTCCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR TCA 72 bp | GTTTTGATGGTAATTGAGGTGAGTTCAGCTAGAGCTTaGGAAGAGCTGTGGGACCTCTACTCATGCATCTGT | + |
Preference number: 3 (lower is better) Translates to: VLMVIEVSSARA*EELWDLYSCIC Trigger: ACAGATGCATGAGTAGAGGTCCCACAGCTCTTCTCAAGCTCTAGCTGAACTCACCTCAATTACCATCAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR TCA 72 bp | ACATTAGAGACAAAGTCAGGAAGTGGGAACCAACCTTaGCAAAACACCTGCAGCAAGTCAGTGACATACCAG | + |
Preference number: 3 (lower is better) Translates to: TLETKSGSGNQP*QNTCSKSVTYQ Trigger: CTGGTATGTCACTGACTTGCTGCAGGTGTTTTGTCAAGGTTGGTTCCCACTTCCTGACTTTGTCTCTAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR GCA 72 bp | GTAGGCAAGAGAGAAGTCTCTGTGGATATGAGCTCTTaGCTTTTTAGAGTAATGGAGATTACTGCCCAGCAC | + |
Preference number: 3 (lower is better) Translates to: VGKREVSVDMSS*LFRVMEITAQH Trigger: GTGCTGGGCAGTAATCTCCATTACTCTAAAAAGGCAAGAGCTCATATCCACAGAGACTTCTCTCTTGCCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CAA 90 bp | CCCACATCACTCTCCTCTGAACACAGGAAGATCTTTCAGTTTCATCAGTTTCCACTGTTTCCTAGGTGTTaGCACTTCCCTGATGTTTTC | + |
Preference number: 3 (lower is better) Translates to: PTSLSSEHRKIFQFHQFPLFPRC*HFPDVF Trigger: GAAAACATCAGGGAAGTGCAAACACCTAGGAAACAG...TGGAAACTGATGAAACTGAAAGATCTTCCTGTGTTCAGAGGAGAGTGATGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR-3UTR CAA 90 bp | GGAGCCACAGCTATGCGTGTATACTGCTCCCTCCAATATATACAGAGAAACAAACTGCAGGCACAATCCTaGGGAAATGAGAGTTTTGAT | + |
Preference number: 3 (lower is better) Translates to: GATAMRVYCSLQYIQRNKLQAQS*GNESFD Trigger: ATCAAAACTCTCATTTCCCAAGGATTGTGCCTGCAG...TTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR-3UTR CAA 90 bp | GTAATGTTGCATTACCAGAAGTGGAGGGCAGTTTCTTCTTGCCTTTGTTCAGATGCGGATGTCTTTCTATaGCCTGTTCTTGTTTGGGGT | + |
Preference number: 3 (lower is better) Translates to: VMLHYQKWRAVSSCLCSDADVFL*PVLVWG Trigger: ACCCCAAACAAGAACAGGCAATAGAAAGACATCCGC...ATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR TCA 72 bp | AAGCAGAGCAACAAAGGTAGAGCTAGAAGGCTTGTGTaGGGTATCAGGGCTCAGATCTTAATTCAGGATGTT | + |
Preference number: 3 (lower is better) Translates to: KQSNKGRARRLV*GIRAQILIQDV Trigger: AACATCCTGAATTAAGATCTGAGCCCTGATACCTCACACAAGCCTTCTAGCTCTACCTTTGTTGCTCTGCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR TCA 72 bp | ATAGAAACTGAAGTTAGTCTGCATTGCTTCGTAGTGTaGTGCCTGCAGGCACAATCCTTGGGAAATGAGAGT | + |
Preference number: 3 (lower is better) Translates to: IETEVSLHCFVV*CLQAQSLGNES Trigger: ACTCTCATTTCCCAAGGATTGTGCCTGCAGGCATCACACTACGAAGCAATGCAGACTAACTTCAGTTTCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR TCA 72 bp | ACCACACGATGGTTAACAACCATCTGTAATGGGATCTaGTGCTCTATTCAGGTGTGTGTGAACAGTGACAGT | + |
Preference number: 3 (lower is better) Translates to: TTRWLTTICNGI*CSIQVCVNSDS Trigger: ACTGTCACTGTTCACACACACCTGAATAGAGCATCAGATCCCATTACAGATGGTTGTTAACCATCGTGTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR TCA 72 bp | CAAGGATATAGAAACACTGCAGCATTAACCGTTTGCTaGTATGTGTGGACCGCTGTGAGATACAACAGCAGA | + |
Preference number: 3 (lower is better) Translates to: QGYRNTAALTVC*YVWTAVRYNSR Trigger: TCTGCTGTTGTATCTCACAGCGGTCCACACATATCAGCAAACGGTTAATGCTGCAGTGTTTCTATATCCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR GCA 72 bp | CTTGCCTTTGTTCAGATTCCTTTATCCCTAACTATATaGCACTCCACTCAATGCCTCAGGCAAGCAGGAAAA | + |
Preference number: 3 (lower is better) Translates to: LAFVQIPLSLTI*HSTQCLRQAGK Trigger: TTTTCCTGCTTGCCTGAGGCATTGAGTGGAGTGGCATATAGTTAGGGATAAAGGAATCTGAACAAAGGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR TCA 72 bp | GCCTTAATGAGAAAAACATCCTTCGATGCCTGGCTCTaGGGTCATCTCCTCAACTTTCTGAATGGATACATT | + |
Preference number: 3 (lower is better) Translates to: ALMRKTSFDAWL*GHLLNFLNGYI Trigger: AATGTATCCATTCAGAAAGTTGAGGAGATGACCTCAGAGCCAGGCATCGAAGGATGTTTTTCTCATTAAGGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR GCA 72 bp | TCTGTGTTTAGCCTTAATGAGAAAAACATCCTTCGATaGCTGGCTCTGAGGTCATCTCCTCAACTTTCTGAA | + |
Preference number: 3 (lower is better) Translates to: SVFSLNEKNILR*LALRSSPQLSE Trigger: TTCAGAAAGTTGAGGAGATGACCTCAGAGCCAGGCATCGAAGGATGTTTTTCTCATTAAGGCTAAACACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR GCA 72 bp | TTAAAAGCCATGCTGTACTTATGCAGACAGATCAGATaGTATCAGAACCCCTTTCAAAGGAAGGCAGTACTC | + |
Preference number: 3 (lower is better) Translates to: LKAMLYLCRQIR*YQNPFQRKAVL Trigger: GAGTACTGCCTTCCTTTGAAAGGGGTTCTGATAGCATCTGATCTGTCTGCATAAGTACAGCATGGCTTTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR CCA 72 bp | AATCCCAGCATTACAGTAATGTTGCATTACCAGAAGTaGAGGGCAGTTTCTTCTTGCCTTTGTTCAGATTCC | + |
Preference number: 3 (lower is better) Translates to: NPSITVMLHYQK*RAVSSCLCSDS Trigger: GGAATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTACTGTAATGCTGGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR-3UTR CAA 90 bp | GTAATGTTGCATTACCAGAAGTGGAGGGCAGTTTCTTCTTGCCTTTGTTCAGATTGGAAGGAAGAAAGCTaGAAAAGCTTCTACCCTACA | + |
Preference number: 3 (lower is better) Translates to: VMLHYQKWRAVSSCLCSDWKEES*KSFYPT Trigger: TGTAGGGTAGAAGCTTTTCAAGCTTTCTTCCTTCCA...ATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CAA 90 bp | GGAATACCCTGTCCTCCCTATGTACCATTAAAGATGTCTTCAGTTTCTTCCCACTCAGAGATTTTCTACTaGAGGAAATATGACAGCCCT | + |
Preference number: 3 (lower is better) Translates to: GIPCPPYVPLKMSSVSSHSEIFY*RKYDSP Trigger: AGGGCTGTCATATTTCCTCAAGTAGAAAATCTCTGA...GTGGGAAGAAACTGAAGACATCTTTAATGGTACATAGGGAGGACAGGGTATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR-3UTR CAA 90 bp | GGAGCCACAGCTATGCGTGTATACTGCTCCCTCCAATATATACAGAGAAACAAATCAGAGATTTTCTACTaGAGGAAATATGACAGCCCT | + |
Preference number: 3 (lower is better) Translates to: GATAMRVYCSLQYIQRNKSEIFY*RKYDSP Trigger: AGGGCTGTCATATTTCCTCAAGTAGAAAATCTCTGA...TTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR-3UTR CAA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAAGCGGATGTCTTTCTATaGCCTGTTCTTGTTTGGGGT | + |
Preference number: 3 (lower is better) Translates to: LSPRISLLQGTTSLIFRKADVFL*PVLVWG Trigger: ACCCCAAACAAGAACAGGCAATAGAAAGACATCCGC...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR-3UTR CAA 90 bp | GGAATACCCTGTCCTCCCTATGTACCATTAAAGATGTCTTCAGTTTCTTCCCACAGTTCATATGTGCTCTaGTTGTATCTATGGGACCTT | + |
Preference number: 3 (lower is better) Translates to: GIPCPPYVPLKMSSVSSHSSYVL*LYLWDL Trigger: AAGGTCCCATAGATACAACAAGAGCACATATGAACT...GTGGGAAGAAACTGAAGACATCTTTAATGGTACATAGGGAGGACAGGGTATTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR-3UTR CAA 90 bp | GGAATACCCTGTCCTCCCTATGTACCATTAAAGATGTCTTCAGTTTCTTCCCACGATTTTGCAGTATCTTaGTGGTCTGTGTTTAGCCTT | + |
Preference number: 3 (lower is better) Translates to: GIPCPPYVPLKMSSVSSHDFAVS*WSVFSL Trigger: AAGGCTAAACACAGACCACAAAGATACTGCAAAATC...GTGGGAAGAAACTGAAGACATCTTTAATGGTACATAGGGAGGACAGGGTATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR GCA 72 bp | TGTGGGACCTCTACTCATGCATCTGTAAGAGCACTGTaGAGTCATAATAAGCTTTCTTCTTTCACAACTCTA | + |
Preference number: 3 (lower is better) Translates to: CGTSTHASVRAL*SHNKLSSFTTL Trigger: TAGAGTTGTGAAAGAAGAAAGCTTATTATGACTGCACAGTGCTCTTACAGATGCATGAGTAGAGGTCCCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR GCA 72 bp | AAGATATGGAAGGAGACACAGCACACAGTTCATATGTaGTCTTGTTGTATCTATGGGACCTTGGACATAATC | + |
Preference number: 3 (lower is better) Translates to: KIWKETQHTVHM*SCCIYGTLDII Trigger: GATTATGTCCAAGGTCCCATAGATACAACAAGAGCACATATGAACTGTGTGCTGTGTCTCCTTCCATATCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR CCA 72 bp | TTCAGTTCTCTGGGTTATAAAGTTAGAAGTGGTCATTaGTTCACCCAAGTTCCTATGTCCCCCAAGATTTCA | + |
Preference number: 3 (lower is better) Translates to: FSSLGYKVRSGH*FTQVPMSPKIS Trigger: TGAAATCTTGGGGGACATAGGAACTTGGGTGAACCAATGACCACTTCTAACTTTATAACCCAGAGAACTGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR CCA 72 bp | ATCAAAGGTTCTATGTACAGCCCTCTTTCAGTTCTCTaGGTTATAAAGTTAGAAGTGGTCATTGGTTCACCC | + |
Preference number: 3 (lower is better) Translates to: IKGSMYSPLSVL*VIKLEVVIGSP Trigger: GGGTGAACCAATGACCACTTCTAACTTTATAACCCAGAGAACTGAAAGAGGGCTGTACATAGAACCTTTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR CCA 72 bp | CGACAAAGCACTTCTGCTGAGGTATTTGAAGGCTCCTaGACAAAACAAACTCATTTATTGAACGAGGACAAT | + |
Preference number: 3 (lower is better) Translates to: RQSTSAEVFEGS*TKQTHLLNEDN Trigger: ATTGTCCTCGTTCAATAAATGAGTTTGTTTTGTCCAGGAGCCTTCAAATACCTCAGCAGAAGTGCTTTGTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CAA 90 bp | AACGGCTCAGATAGAACTGCTCTTGTCAGTATGTTTGCTTTTGTGCATGCATTTTGGAAGGAAGAAAGCTaGAAAAGCTTCTACCCTACA | + |
Preference number: 3 (lower is better) Translates to: NGSDRTALVSMFAFVHAFWKEES*KSFYPT Trigger: TGTAGGGTAGAAGCTTTTCAAGCTTTCTTCCTTCCA...AAATGCATGCACAAAAGCAAACATACTGACAAGAGCAGTTCTATCTGAGCCGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR-3UTR CAA 90 bp | GATCTTAATTCAGGATGTTTTTCAACACTACAGACTCCAAAACAACTTCCTCCCTGGAAGGAAGAAAGCTaGAAAAGCTTCTACCCTACA | + |
Preference number: 3 (lower is better) Translates to: DLNSGCFSTLQTPKQLPPWKEES*KSFYPT Trigger: TGTAGGGTAGAAGCTTTTCAAGCTTTCTTCCTTCCA...GGGAGGAAGTTGTTTTGGAGTCTGTAGTGTTGAAAAACATCCTGAATTAAGATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR-3UTR CAA 90 bp | AACGGCTCAGATAGAACTGCTCTTGTCAGTATGTTTGCTTTTGTGCATGCATTTTGGGAAATGAGAGTTTaGATGGTAATTGAGGTGAGT | + |
Preference number: 3 (lower is better) Translates to: NGSDRTALVSMFAFVHAFWEMRV*MVIEVS Trigger: ACTCACCTCAATTACCATCAAAACTCTCATTTCCCA...AAATGCATGCACAAAAGCAAACATACTGACAAGAGCAGTTCTATCTGAGCCGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR TCA 72 bp | AGCCTTATTCCCCTATGTACCATATTCACAGTTAACTaGATGAAGTCAAGACAAGAACTTGGATGCAGACAG | + |
Preference number: 3 (lower is better) Translates to: SLIPLCTIFTVN*MKSRQELGCRQ Trigger: CTGTCTGCATCCAAGTTCTTGTCTTGACTTCATTCAGTTAACTGTGAATATGGTACATAGGGGAATAAGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR TCA 72 bp | TTAGTATATTATCTGGAATATCCAGAAATGCAGTGGTaGTTAAAGAGGAGGCTCTGCTGTTGGTCCTTTAGC | + |
Preference number: 3 (lower is better) Translates to: LVYYLEYPEMQW*LKRRLCCWSFS Trigger: GCTAAAGGACCAACAGCAGAGCCTCCTCTTTAATCACCACTGCATTTCTGGATATTCCAGATAATATACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR TCA 72 bp | TTGCCTAGAGCCAATATAATAAGCCTAAAATACTGCTaGGCTACATGGTTGAGGTTAACTAAAGTGCACGCT | + |
Preference number: 3 (lower is better) Translates to: LPRANIISLKYC*ATWLRLTKVHA Trigger: AGCGTGCACTTTAGTTAACCTCAACCATGTAGCTCAGCAGTATTTTAGGCTTATTATATTGGCTCTAGGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CCA 72 bp | AATGAAATAAGATGCCATGCACATTTTAGGAGTGTATaGAGGGGTACAAGTGGTGTTCTGGACATAGGAAAT | + |
Preference number: 3 (lower is better) Translates to: NEIRCHAHFRSV*RGTSGVLDIGN Trigger: ATTTCCTATGTCCAGAACACCACTTGTACCCCTCCATACACTCCTAAAATGTGCATGGCATCTTATTTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR CCA 72 bp | ACAGCACACAGTTCATATGTGCTCTTGTTGTATCTATaGGACCTTGGACATAATCAAGTTTTCACAGATTCC | + |
Preference number: 3 (lower is better) Translates to: TAHSSYVLLLYL*DLGHNQVFTDS Trigger: GGAATCTGTGAAAACTTGATTATGTCCAAGGTCCCATAGATACAACAAGAGCACATATGAACTGTGTGCTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CCA 72 bp | TGCCTGGCTCTGAGGTCATCTCCTCAACTTTCTGAATaGATACATTTTTATGAGTCTACCAGTGATAAGATA | + |
Preference number: 3 (lower is better) Translates to: CLALRSSPQLSE*IHFYESTSDKI Trigger: TATCTTATCACTGGTAGACTCATAAAAATGTATCCATTCAGAAAGTTGAGGAGATGACCTCAGAGCCAGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR TCA 72 bp | GGAAATTTGATGTATTTAGACTCAGGCTGTGTGTCCTaGTTTATTAGAGTTGTCAGAAATCTTCACACAGGG | + |
Preference number: 3 (lower is better) Translates to: GNLMYLDSGCVS*FIRVVRNLHTG Trigger: CCCTGTGTGAAGATTTCTGACAACTCTAATAAATCAGGACACACAGCCTGAGTCTAAATACATCAAATTTCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR CCA 72 bp | TGGATACATTTTTATGAGTCTACCAGTGATAAGATATaGAAGGAGACACAGCACACAGTTCATATGTGCTCT | + |
Preference number: 3 (lower is better) Translates to: WIHFYESTSDKI*KETQHTVHMCS Trigger: AGAGCACATATGAACTGTGTGCTGTGTCTCCTTCCATATCTTATCACTGGTAGACTCATAAAAATGTATCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR-3UTR CAA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAAGTTATATCATCTCCATaGTTTTCAGAAGCAGAGCAA | + |
Preference number: 3 (lower is better) Translates to: LSPRISLLQGTTSLIFRKVISSP*FSEAEQ Trigger: TTGCTCTGCTTCTGAAAACAATGGAGATGATATAAC...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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3UTR TCA 72 bp | TTATTCCCCTATGTACCATATTCACAGTTAACTGAATaGAGTCAAGACAAGAACTTGGATGCAGACAGTCAA | + |
Preference number: 3 (lower is better) Translates to: LFPYVPYSQLTE*SQDKNLDADSQ Trigger: TTGACTGTCTGCATCCAAGTTCTTGTCTTGACTTCATTCAGTTAACTGTGAATATGGTACATAGGGGAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR TCA 72 bp | ACAGAAGACTGTAAATCTCCTGTAAAGAATGGAAGATaGGTTATAACCAGGGAAGGAAACAAATATTGGCCA | + |
Preference number: 3 (lower is better) Translates to: TEDCKSPVKNGR*VITREGNKYWP Trigger: TGGCCAATATTTGTTTCCTTCCCTGGTTATAACTCATCTTCCATTCTTTACAGGAGATTTACAGTCTTCTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR TCA 72 bp | TCTGTAATGGGATCTGATGCTCTATTCAGGTGTGTGTaGACAGTGACAGTGTACTCACATATACAATATAAA | + |
Preference number: 3 (lower is better) Translates to: SVMGSDALFRCV*TVTVYSHIQYK Trigger: TTTATATTGTATATGTGAGTACACTGTCACTGTTCACACACACCTGAATAGAGCATCAGATCCCATTACAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR CCA 72 bp | TTTCTTATAACTCCCATAACAATTTGCCTCTATAATTaGCATTATATTAGGCAGTGCTGTGCTGCCCTACAT | + |
Preference number: 3 (lower is better) Translates to: FLITPITICLYN*HYIRQCCAALH Trigger: ATGTAGGGCAGCACAGCACTGCCTAATATAATGCCAATTATAGAGGCAAATTGTTATGGGAGTTATAAGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR TCA 72 bp | TTTCAAAACCGTGCCTTCTATTGCAACAGTAATCTGTaGTATTCCAAATCCCAACCAAAGCTGTTTAATAGT | + |
Preference number: 3 (lower is better) Translates to: FQNRAFYCNSNL*YSKSQPKLFNS Trigger: ACTATTAAACAGCTTTGGTTGGGATTTGGAATATCACAGATTACTGTTGCAATAGAAGGCACGGTTTTGAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR TCA 72 bp | ATTCCAAATCCCAACCAAAGCTGTTTAATAGTTTGCTaGTGTCTTAGATTCTGTTGCTGTATCAAAACACAA | + |
Preference number: 3 (lower is better) Translates to: IPNPNQSCLIVC*CLRFCCCIKTQ Trigger: TTGTGTTTTGATACAGCAACAGAATCTAAGACATCAGCAAACTATTAAACAGCTTTGGTTGGGATTTGGAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR TCA 72 bp | AATATGACAGCCCTAAAACAAATCAAGGTTATATTCTaGGGTGTCAAACAGGCTCCCTGTTCTATAAATTAT | + |
Preference number: 3 (lower is better) Translates to: NMTALKQIKVIF*GVKQAPCSINY Trigger: ATAATTTATAGAACAGGGAGCCTGTTTGACACCTCAGAATATAACCTTGATTTGTTTTAGGGCTGTCATATT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
3UTR TCA 72 bp | CATTTATTGAACGAGGACAATAACTTTCCAAATACATaGCCACTAGAAATTTGTTGTGTGTTTGCCATTCTC | + |
Preference number: 3 (lower is better) Translates to: HLLNEDNNFPNT*PLEICCVFAIL Trigger: GAGAATGGCAAACACACAACAAATTTCTAGTGGTCATGTATTTGGAAAGTTATTGTCCTCGTTCAATAAATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR TCA 72 bp | AAAGATAGGTCATTCTGGCATGTTTTAATAAAGGCTTaGCTAGCTCAGATAAAGTGGATAAAATCAACAAGG | + |
Preference number: 3 (lower is better) Translates to: KDRSFWHVLIKA*LAQIKWIKSTR Trigger: CCTTGTTGATTTTATCCACTTTATCTGAGCTAGTCAAGCCTTTATTAAAACATGCCAGAATGACCTATCTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR CAA 72 bp | CAGGCTTCTGGCCCAGAGAGCTCTAAATCCAGGGCATaGCTGGGTGCAGAAAGATCTGCAGTAGAGTCTGGA | + |
Preference number: 4 (lower is better) Translates to: QASGPESSKSRA*LGAERSAVESG Trigger: TCCAGACTCTACTGCAGATCTTTCTGCACCCAGCAATGCCCTGGATTTAGAGCTCTCTGGGCCAGAAGCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
CDS-3UTR TCA 90 bp | ACCTTTCCATTCCTTAAGGGATTAGAGCTGAAGGCACGCCTCCTTGTCCATCACCTAAGAAAGCCACTGTaGAGCTCCCCAGAGCCAAGG | + |
Preference number: 4 (lower is better) Translates to: TFPFLKGLELKARLLVHHLRKPL*SSPEPR Trigger: CCTTGGCTCTGGGGAGCTTCACAGTGGCTTTCTTAG...GTGATGGACAAGGAGGCGTGCCTTCAGCTCTAATCCCTTAAGGAATGGAAAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CAA 72 bp | GGTTTCCACACACTTTCACCTGTGGGACAAGGTGCTTaGCCACAATTCTTTCAGCATGGCAAGAGCTCCCGT | + |
Preference number: 4 (lower is better) Translates to: GFHTLSPVGQGA*PQFFQHGKSSR Trigger: ACGGGAGCTCTTGCCATGCTGAAAGAATTGTGGCAAAGCACCTTGTCCCACAGGTGAAAGTGTGTGGAAACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
CDS-3UTR CCA 90 bp | ACCTTTCCATTCCTTAAGGGATTAGAGCTGAAGGCACGCCTCCTTGTCCATCACGCATCAAGGAGACCATaGCATGGGACAAGTGTGTGT | + |
Preference number: 4 (lower is better) Translates to: TFPFLKGLELKARLLVHHASRRP*HGTSVC Trigger: ACACACACTTGTCCCATGCCATGGTCTCCTTGATGC...GTGATGGACAAGGAGGCGTGCCTTCAGCTCTAATCCCTTAAGGAATGGAAAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR CAA 72 bp | TGCTCTGTTTGGCCAGCAGATGTCAGAAGGGAAACATaGGTTATGGGAGGAGTAAATTTGGGGGAGGGGTCA | + |
Preference number: 4 (lower is better) Translates to: CSVWPADVRRET*VMGGVNLGEGS Trigger: TGACCCCTCCCCCAAATTTACTCCTCCCATAACCAATGTTTCCCTTCTGACATCTGCTGGCCAAACAGAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
CDS-3UTR CCA 90 bp | ACCTTTCCATTCCTTAAGGGATTAGAGCTGAAGGCACGCCTCCTTGTCCATCACCTGATGTTCCTTCTGTaGCCCAGTCCAAATCTTCAG | + |
Preference number: 4 (lower is better) Translates to: TFPFLKGLELKARLLVHHLMFLL*PSPNLQ Trigger: CTGAAGATTTGGACTGGGCCACAGAAGGAACATCAG...GTGATGGACAAGGAGGCGTGCCTTCAGCTCTAATCCCTTAAGGAATGGAAAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR TCA 90 bp | CATGGCAAGAGCTCCCGTACACATGGAGTAAAAGAAACACTTTTCCATAGCTCTCTAGTACTAGACTTGTaGGGGCAGAGAGGAACAGGG | + |
Preference number: 4 (lower is better) Translates to: HGKSSRTHGVKETLFHSSLVLDL*GQRGTG Trigger: CCCTGTTCCTCTCTGCCCTCACAAGTCTAGTACTAG...AGAGCTATGGAAAAGTGTTTCTTTTACTCCATGTGTACGGGAGCTCTTGCCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
CDS-3UTR TCA 90 bp | CTTAGAAAATATTCCCTCATCCAAGGCTCAGGGAATAGTAAAGAAGATGGTGGGCTAGTACTAGACTTGTaGGGGCAGAGAGGAACAGGG | + |
Preference number: 4 (lower is better) Translates to: LRKYSLIQGSGNSKEDGGLVLDL*GQRGTG Trigger: CCCTGTTCCTCTCTGCCCTCACAAGTCTAGTACTAG...CCCACCATCTTCTTTACTATTCCCTGAGCCTTGGATGAGGGAATATTTTCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
CDS-3UTR GCA 90 bp | ACCTTTCCATTCCTTAAGGGATTAGAGCTGAAGGCACGCCTCCTTGTCCATCACGTCAAAATTGTGCAGTaGTGTCCATTCCGATGTGTT | + |
Preference number: 4 (lower is better) Translates to: TFPFLKGLELKARLLVHHVKIVQ*CPFRCV Trigger: AACACATCGGAATGGACAGCACTGCACAATTTTGAC...GTGATGGACAAGGAGGCGTGCCTTCAGCTCTAATCCCTTAAGGAATGGAAAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR GCA 90 bp | GGAATACCCTGTCCTCCCTATGTACCATTAAAGATGTCTTCAGTTTCTTCCCACAGAGGAACAGGGCTATaGATCCTAGAGACATCCCCA | + |
Preference number: 4 (lower is better) Translates to: GIPCPPYVPLKMSSVSSHRGTGL*ILETSP Trigger: TGGGGATGTCTCTAGGATGCATAGCCCTGTTCCTCT...GTGGGAAGAAACTGAAGACATCTTTAATGGTACATAGGGAGGACAGGGTATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | GGAGCCACAGCTATGCGTGTATACTGCTCCCTCCAATATATACAGAGAAACAAAAGTGTGTGTCCTTGGTaGCTACCTGATGGACATAGG | + |
Preference number: 4 (lower is better) Translates to: GATAMRVYCSLQYIQRNKSVCPW*LPDGHR Trigger: CCTATGTCCATCAGGTAGCCACCAAGGACACACACT...TTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 |
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CDS-3UTR CCA 90 bp | CATGGCAAGAGCTCCCGTACACATGGAGTAAAAGAAACACTTTTCCATAGCTCTGCATCAAGGAGACCATaGCATGGGACAAGTGTGTGT | + |
Preference number: 4 (lower is better) Translates to: HGKSSRTHGVKETLFHSSASRRP*HGTSVC Trigger: ACACACACTTGTCCCATGCCATGGTCTCCTTGATGC...AGAGCTATGGAAAAGTGTTTCTTTTACTCCATGTGTACGGGAGCTCTTGCCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CAA 72 bp | GAGCCTGTCCTCAGCAAATCACTGATATTTGAATCCTaGAATCAGGCTTCTGGCCCAGAGAGCTCTAAATCC | + |
Preference number: 4 (lower is better) Translates to: EPVLSKSLIFES*NQASGPESSKS Trigger: GGATTTAGAGCTCTCTGGGCCAGAAGCCTGATTCAAGGATTCAAATATCAGTGATTTGCTGAGGACAGGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR TCA 90 bp | CTTAGAAAATATTCCCTCATCCAAGGCTCAGGGAATAGTAAAGAAGATGGTGGGCATTCATCTCCACACTaGCCACCAAGAAGCCAGACT | + |
Preference number: 4 (lower is better) Translates to: LRKYSLIQGSGNSKEDGGHSSPH*PPRSQT Trigger: AGTCTGGCTTCTTGGTGGTCAGTGTGGAGATGAATG...CCCACCATCTTCTTTACTATTCCCTGAGCCTTGGATGAGGGAATATTTTCTAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR TCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAACTAAGAAAGCCACTGTaGAGCTCCCCAGAGCCAAGG | + |
Preference number: 4 (lower is better) Translates to: LSPRISLLQGTTSLIFRKLRKPL*SSPEPR Trigger: CCTTGGCTCTGGGGAGCTTCACAGTGGCTTTCTTAG...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR TCA 90 bp | GTCTTCAGTTTCTTCCCACACAGAACTACCTCTAATTTATTGTTAAGGAGCACTCTAAGAAAGCCACTGTaGAGCTCCCCAGAGCCAAGG | + |
Preference number: 4 (lower is better) Translates to: VFSFFPHRTTSNLLLRSTLRKPL*SSPEPR Trigger: CCTTGGCTCTGGGGAGCTTCACAGTGGCTTTCTTAG...AGTGCTCCTTAACAATAAATTAGAGGTAGTTCTGTGTGGGAAGAAACTGAAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR GCA 90 bp | ACCTTTCCATTCCTTAAGGGATTAGAGCTGAAGGCACGCCTCCTTGTCCATCACACTATGTCAAAATTGTaGAGTGCTGTCCATTCCGAT | + |
Preference number: 4 (lower is better) Translates to: TFPFLKGLELKARLLVHHTMSKL*SAVHSD Trigger: ATCGGAATGGACAGCACTGCACAATTTTGACATAGT...GTGATGGACAAGGAGGCGTGCCTTCAGCTCTAATCCCTTAAGGAATGGAAAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR GCA 90 bp | GTAATGTTGCATTACCAGAAGTGGAGGGCAGTTTCTTCTTGCCTTTGTTCAGATAGAGGAACAGGGCTATaGATCCTAGAGACATCCCCA | + |
Preference number: 4 (lower is better) Translates to: VMLHYQKWRAVSSCLCSDRGTGL*ILETSP Trigger: TGGGGATGTCTCTAGGATGCATAGCCCTGTTCCTCT...ATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | GGAATACCCTGTCCTCCCTATGTACCATTAAAGATGTCTTCAGTTTCTTCCCACCTGATGTTCCTTCTGTaGCCCAGTCCAAATCTTCAG | + |
Preference number: 4 (lower is better) Translates to: GIPCPPYVPLKMSSVSSHLMFLL*PSPNLQ Trigger: CTGAAGATTTGGACTGGGCCACAGAAGGAACATCAG...GTGGGAAGAAACTGAAGACATCTTTAATGGTACATAGGGAGGACAGGGTATTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR TCA 90 bp | GGAGCCACAGCTATGCGTGTATACTGCTCCCTCCAATATATACAGAGAAACAAATTACATGGCAGAAGATaGGAGAAAACTTCAGGAGCC | + |
Preference number: 4 (lower is better) Translates to: GATAMRVYCSLQYIQRNKLHGRR*EKTSGA Trigger: GGCTCCTGAAGTTTTCTCTCATCTTCTGCCATGTAA...TTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR TCA 90 bp | CATGGCAAGAGCTCCCGTACACATGGAGTAAAAGAAACACTTTTCCATAGCTCTTTACATGGCAGAAGATaGGAGAAAACTTCAGGAGCC | + |
Preference number: 4 (lower is better) Translates to: HGKSSRTHGVKETLFHSSLHGRR*EKTSGA Trigger: GGCTCCTGAAGTTTTCTCTCATCTTCTGCCATGTAA...AGAGCTATGGAAAAGTGTTTCTTTTACTCCATGTGTACGGGAGCTCTTGCCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR TCA 90 bp | GGAATACCCTGTCCTCCCTATGTACCATTAAAGATGTCTTCAGTTTCTTCCCACTTACATGGCAGAAGATaGGAGAAAACTTCAGGAGCC | + |
Preference number: 4 (lower is better) Translates to: GIPCPPYVPLKMSSVSSHLHGRR*EKTSGA Trigger: GGCTCCTGAAGTTTTCTCTCATCTTCTGCCATGTAA...GTGGGAAGAAACTGAAGACATCTTTAATGGTACATAGGGAGGACAGGGTATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR GCA 90 bp | AATGAGAGCACATGGAATAATGCTGATTACTGGCTTCATTCTAGTCTGTGCTCTAGAGGAACAGGGCTATaGATCCTAGAGACATCCCCA | + |
Preference number: 4 (lower is better) Translates to: NESTWNNADYWLHSSLCSRGTGL*ILETSP Trigger: TGGGGATGTCTCTAGGATGCATAGCCCTGTTCCTCT...AGAGCACAGACTAGAATGAAGCCAGTAATCAGCATTATTCCATGTGCTCTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR GCA 90 bp | GGAATACCCTGTCCTCCCTATGTACCATTAAAGATGTCTTCAGTTTCTTCCCACATTTTGGAAGAAAGATaGACCCTAGCAAGCCTGCAC | + |
Preference number: 4 (lower is better) Translates to: GIPCPPYVPLKMSSVSSHILEER*TLASLH Trigger: GTGCAGGCTTGCTAGGGTGCATCTTTCTTCCAAAAT...GTGGGAAGAAACTGAAGACATCTTTAATGGTACATAGGGAGGACAGGGTATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR GCA 90 bp | GGAGCCACAGCTATGCGTGTATACTGCTCCCTCCAATATATACAGAGAAACAAAATTTTGGAAGAAAGATaGACCCTAGCAAGCCTGCAC | + |
Preference number: 4 (lower is better) Translates to: GATAMRVYCSLQYIQRNKILEER*TLASLH Trigger: GTGCAGGCTTGCTAGGGTGCATCTTTCTTCCAAAAT...TTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | AATGAGAGCACATGGAATAATGCTGATTACTGGCTTCATTCTAGTCTGTGCTCTGCATCAAGGAGACCATaGCATGGGACAAGTGTGTGT | + |
Preference number: 4 (lower is better) Translates to: NESTWNNADYWLHSSLCSASRRP*HGTSVC Trigger: ACACACACTTGTCCCATGCCATGGTCTCCTTGATGC...AGAGCACAGACTAGAATGAAGCCAGTAATCAGCATTATTCCATGTGCTCTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CAA 72 bp | TACATTAGAGACAAAGTCAGGAAGTGGGAACCAACCTaGACAAAACACCTGCAGCAAGTCAGTGACATACCA | + |
Preference number: 4 (lower is better) Translates to: YIRDKVRKWEPT*TKHLQQVSDIP Trigger: TGGTATGTCACTGACTTGCTGCAGGTGTTTTGTCAAGGTTGGTTCCCACTTCCTGACTTTGTCTCTAATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR TCA 90 bp | GGAGCCACAGCTATGCGTGTATACTGCTCCCTCCAATATATACAGAGAAACAAACCTGCTGACAGTCATTaGATATTCCTTTGCGTACTT | + |
Preference number: 4 (lower is better) Translates to: GATAMRVYCSLQYIQRNKPADSH*IFLCVL Trigger: AAGTACGCAAAGGAATATTCAATGACTGTCAGCAGG...TTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR TCA 90 bp | GGAGCCACAGCTATGCGTGTATACTGCTCCCTCCAATATATACAGAGAAACAAATCATACTCTGCACACTaGTTTTCCCTATGCTTCATG | + |
Preference number: 4 (lower is better) Translates to: GATAMRVYCSLQYIQRNKSYSAH*FSLCFM Trigger: CATGAAGCATAGGGAAAATCAGTGTGCAGAGTATGA...TTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR TCA 90 bp | CTCAGGAACTGTTATCAATGTGTCACTTGGAATGTCTTCAATTATACATTTCTCCTAAGAAAGCCACTGTaGAGCTCCCCAGAGCCAAGG | + |
Preference number: 4 (lower is better) Translates to: LRNCYQCVTWNVFNYTFLLRKPL*SSPEPR Trigger: CCTTGGCTCTGGGGAGCTTCACAGTGGCTTTCTTAG...GAGAAATGTATAATTGAAGACATTCCAAGTGACACATTGATAACAGTTCCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233198.2 ENSMUST00000233547.2 |
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CDS-3UTR GCA 90 bp | CATGGCAAGAGCTCCCGTACACATGGAGTAAAAGAAACACTTTTCCATAGCTCTGTCAAAATTGTGCAGTaGTGTCCATTCCGATGTGTT | + |
Preference number: 4 (lower is better) Translates to: HGKSSRTHGVKETLFHSSVKIVQ*CPFRCV Trigger: AACACATCGGAATGGACAGCACTGCACAATTTTGAC...AGAGCTATGGAAAAGTGTTTCTTTTACTCCATGTGTACGGGAGCTCTTGCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | GGAGCCACAGCTATGCGTGTATACTGCTCCCTCCAATATATACAGAGAAACAAATCCTCCAAAAGCAAATaGGTTCAGTTACATGGCAGA | + |
Preference number: 4 (lower is better) Translates to: GATAMRVYCSLQYIQRNKSSKSK*VQLHGR Trigger: TCTGCCATGTAACTGAACCCATTTGCTTTTGGAGGA...TTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR TCA 90 bp | AATGAGAGCACATGGAATAATGCTGATTACTGGCTTCATTCTAGTCTGTGCTCTTTACATGGCAGAAGATaGGAGAAAACTTCAGGAGCC | + |
Preference number: 4 (lower is better) Translates to: NESTWNNADYWLHSSLCSLHGRR*EKTSGA Trigger: GGCTCCTGAAGTTTTCTCTCATCTTCTGCCATGTAA...AGAGCACAGACTAGAATGAAGCCAGTAATCAGCATTATTCCATGTGCTCTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR TCA 90 bp | TTCTGTCGAGGTCTCCTCTACTTTGGTAACCCAGTTTCCTTCACTTACTTTTTCTCATACTCTGCACACTaGTTTTCCCTATGCTTCATG | + |
Preference number: 4 (lower is better) Translates to: FCRGLLYFGNPVSFTYFFSYSAH*FSLCFM Trigger: CATGAAGCATAGGGAAAATCAGTGTGCAGAGTATGA...GAAAAAGTAAGTGAAGGAAACTGGGTTACCAAAGTAGAGGAGACCTCGACAGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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CDS-3UTR TCA 90 bp | CTTAGAAAATATTCCCTCATCCAAGGCTCAGGGAATAGTAAAGAAGATGGTGGGTCATACTCTGCACACTaGTTTTCCCTATGCTTCATG | + |
Preference number: 4 (lower is better) Translates to: LRKYSLIQGSGNSKEDGGSYSAH*FSLCFM Trigger: CATGAAGCATAGGGAAAATCAGTGTGCAGAGTATGA...CCCACCATCTTCTTTACTATTCCCTGAGCCTTGGATGAGGGAATATTTTCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR TCA 90 bp | CTCAGGAACTGTTATCAATGTGTCACTTGGAATGTCTTCAATTATACATTTCTCCTAGTACTAGACTTGTaGGGGCAGAGAGGAACAGGG | + |
Preference number: 4 (lower is better) Translates to: LRNCYQCVTWNVFNYTFLLVLDL*GQRGTG Trigger: CCCTGTTCCTCTCTGCCCTCACAAGTCTAGTACTAG...GAGAAATGTATAATTGAAGACATTCCAAGTGACACATTGATAACAGTTCCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233198.2 ENSMUST00000233547.2 |
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CDS-3UTR TCA 90 bp | ACAATTCAATGTATTCTCTTAGAAAATATTCCCTCATCCAAGGCTCAGGGAATACTAGTACTAGACTTGTaGGGGCAGAGAGGAACAGGG | + |
Preference number: 4 (lower is better) Translates to: TIQCILLENIPSSKAQGILVLDL*GQRGTG Trigger: CCCTGTTCCTCTCTGCCCTCACAAGTCTAGTACTAG...TATTCCCTGAGCCTTGGATGAGGGAATATTTTCTAAGAGAATACATTGAATTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | GGAGCCACAGCTATGCGTGTATACTGCTCCCTCCAATATATACAGAGAAACAAAATGGGTTCAGTTACATaGCAGAAGATGAGAGAAAAC | + |
Preference number: 4 (lower is better) Translates to: GATAMRVYCSLQYIQRNKMGSVT*QKMREN Trigger: GTTTTCTCTCATCTTCTGCCATGTAACTGAACCCAT...TTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | CATGGCAAGAGCTCCCGTACACATGGAGTAAAAGAAACACTTTTCCATAGCTCTATGGGTTCAGTTACATaGCAGAAGATGAGAGAAAAC | + |
Preference number: 4 (lower is better) Translates to: HGKSSRTHGVKETLFHSSMGSVT*QKMREN Trigger: GTTTTCTCTCATCTTCTGCCATGTAACTGAACCCAT...AGAGCTATGGAAAAGTGTTTCTTTTACTCCATGTGTACGGGAGCTCTTGCCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | GTCTTCAGTTTCTTCCCACACAGAACTACCTCTAATTTATTGTTAAGGAGCACTCTGATGTTCCTTCTGTaGCCCAGTCCAAATCTTCAG | + |
Preference number: 4 (lower is better) Translates to: VFSFFPHRTTSNLLLRSTLMFLL*PSPNLQ Trigger: CTGAAGATTTGGACTGGGCCACAGAAGGAACATCAG...AGTGCTCCTTAACAATAAATTAGAGGTAGTTCTGTGTGGGAAGAAACTGAAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CAA 72 bp | GAAGGAGACACAGCACACAGTTCATATGTGCTCTTGTaGTATCTATGGGACCTTGGACATAATCAAGTTTTC | + |
Preference number: 4 (lower is better) Translates to: EGDTAHSSYVLL*YLWDLGHNQVF Trigger: GAAAACTTGATTATGTCCAAGGTCCCATAGATACAACAAGAGCACATATGAACTGTGTGCTGTGTCTCCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR CAA 72 bp | ATGGAAGGAGACACAGCACACAGTTCATATGTGCTCTaGTTGTATCTATGGGACCTTGGACATAATCAAGTT | + |
Preference number: 4 (lower is better) Translates to: MEGDTAHSSYVL*LYLWDLGHNQV Trigger: AACTTGATTATGTCCAAGGTCCCATAGATACAACAAGAGCACATATGAACTGTGTGCTGTGTCTCCTTCCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
3UTR CAA 72 bp | TTTATGAATGATCACCAGTCTTCCCAACAAGTCTTCTaGTCTCCCAGAATTTCCTTGTTACAAGGGACTACC | + |
Preference number: 4 (lower is better) Translates to: FMNDHQSSQQVF*SPRISLLQGTT Trigger: GGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAAGAAGACTTGTTGGGAAGACTGGTGATCATTCATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
CDS-3UTR TCA 90 bp | AATGAGAGCACATGGAATAATGCTGATTACTGGCTTCATTCTAGTCTGTGCTCTCCTGCTGACAGTCATTaGATATTCCTTTGCGTACTT | + |
Preference number: 4 (lower is better) Translates to: NESTWNNADYWLHSSLCSPADSH*IFLCVL Trigger: AAGTACGCAAAGGAATATTCAATGACTGTCAGCAGG...AGAGCACAGACTAGAATGAAGCCAGTAATCAGCATTATTCCATGTGCTCTCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
CDS-3UTR GCA 90 bp | GTAATGTTGCATTACCAGAAGTGGAGGGCAGTTTCTTCTTGCCTTTGTTCAGATACTATGTCAAAATTGTaGAGTGCTGTCCATTCCGAT | + |
Preference number: 4 (lower is better) Translates to: VMLHYQKWRAVSSCLCSDTMSKL*SAVHSD Trigger: ATCGGAATGGACAGCACTGCACAATTTTGACATAGT...ATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR GCA 90 bp | TTACCCACCTGTTATCAATGTGTCACTTGGAATGTCTTCAATTATACATTTCTCAGAGGAACAGGGCTATaGATCCTAGAGACATCCCCA | + |
Preference number: 4 (lower is better) Translates to: LPTCYQCVTWNVFNYTFLRGTGL*ILETSP Trigger: TGGGGATGTCTCTAGGATGCATAGCCCTGTTCCTCT...GAGAAATGTATAATTGAAGACATTCCAAGTGACACATTGATAACAGGTGGGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
CDS-3UTR GCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAAATTTTGGAAGAAAGATaGACCCTAGCAAGCCTGCAC | + |
Preference number: 4 (lower is better) Translates to: LSPRISLLQGTTSLIFRKILEER*TLASLH Trigger: GTGCAGGCTTGCTAGGGTGCATCTTTCTTCCAAAAT...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
CDS-3UTR GCA 90 bp | GTCTTCAGTTTCTTCCCACACAGAACTACCTCTAATTTATTGTTAAGGAGCACTATTTTGGAAGAAAGATaGACCCTAGCAAGCCTGCAC | + |
Preference number: 4 (lower is better) Translates to: VFSFFPHRTTSNLLLRSTILEER*TLASLH Trigger: GTGCAGGCTTGCTAGGGTGCATCTTTCTTCCAAAAT...AGTGCTCCTTAACAATAAATTAGAGGTAGTTCTGTGTGGGAAGAAACTGAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
CDS-3UTR CCA 90 bp | TTACCCACCTGTTATCAATGTGTCACTTGGAATGTCTTCAATTATACATTTCTCGCATCAAGGAGACCATaGCATGGGACAAGTGTGTGT | + |
Preference number: 4 (lower is better) Translates to: LPTCYQCVTWNVFNYTFLASRRP*HGTSVC Trigger: ACACACACTTGTCCCATGCCATGGTCTCCTTGATGC...GAGAAATGTATAATTGAAGACATTCCAAGTGACACATTGATAACAGGTGGGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
CDS-3UTR CCA 90 bp | GTAATGTTGCATTACCAGAAGTGGAGGGCAGTTTCTTCTTGCCTTTGTTCAGATGGAAACTTCATTTTCTaGGCACCGATCACAATCAAA | + |
Preference number: 4 (lower is better) Translates to: VMLHYQKWRAVSSCLCSDGNFIF*APITIK Trigger: TTTGATTGTGATCGGTGCCCAGAAAATGAAGTTTCC...ATCTGAACAAAGGCAAGAAGAAACTGCCCTCCACTTCTGGTAATGCAACATTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
CDS-3UTR CCA 90 bp | TTCTGTCGAGGTCTCCTCTACTTTGGTAACCCAGTTTCCTTCACTTACTTTTTCGGAAACTTCATTTTCTaGGCACCGATCACAATCAAA | + |
Preference number: 4 (lower is better) Translates to: FCRGLLYFGNPVSFTYFFGNFIF*APITIK Trigger: TTTGATTGTGATCGGTGCCCAGAAAATGAAGTTTCC...GAAAAAGTAAGTGAAGGAAACTGGGTTACCAAAGTAGAGGAGACCTCGACAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
||
CDS-3UTR CCA 90 bp | GGAGCCACAGCTATGCGTGTATACTGCTCCCTCCAATATATACAGAGAAACAAAGGGTTTTCTCTAAGTTaGCATATTTATCACCTGTAC | + |
Preference number: 4 (lower is better) Translates to: GATAMRVYCSLQYIQRNKGFSLS*HIYHLY Trigger: GTACAGGTGATAAATATGCCAACTTAGAGAAAACCC...TTTGTTTCTCTGTATATATTGGAGGGAGCAGTATACACGCATAGCTGTGGCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
||
CDS-3UTR CCA 90 bp | CATGATCATATATACACTATGGAAAGCTCAGGAACTGTTATCAATGTGTCACTTACAAGTGTGTGTCCTTaGTGGCTACCTTTGGTGTCC | + |
Preference number: 4 (lower is better) Translates to: HDHIYTMESSGTVINVSLTSVCP*WLPLVS Trigger: GGACACCAAAGGTAGCCACCAAGGACACACACTTGT...AAGTGACACATTGATAACAGTTCCTGAGCTTTCCATAGTGTATATATGATCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233547.2 |
||
CDS-3UTR CCA 90 bp | TTACCCACCTGTTATCAATGTGTCACTTGGAATGTCTTCAATTATACATTTCTCACAAGTGTGTGTCCTTaGTGGCTACCTTTGGTGTCC | + |
Preference number: 4 (lower is better) Translates to: LPTCYQCVTWNVFNYTFLTSVCP*WLPLVS Trigger: GGACACCAAAGGTAGCCACCAAGGACACACACTTGT...GAGAAATGTATAATTGAAGACATTCCAAGTGACACATTGATAACAGGTGGGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233835.2 |
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CDS-3UTR TCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAACCTGCTGACAGTCATTaGATATTCCTTTGCGTACTT | + |
Preference number: 4 (lower is better) Translates to: LSPRISLLQGTTSLIFRKPADSH*IFLCVL Trigger: AAGTACGCAAAGGAATATTCAATGACTGTCAGCAGG...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR TCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAATCATACTCTGCACACTaGTTTTCCCTATGCTTCATG | + |
Preference number: 4 (lower is better) Translates to: LSPRISLLQGTTSLIFRKSYSAH*FSLCFM Trigger: CATGAAGCATAGGGAAAATCAGTGTGCAGAGTATGA...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | GGAATACCCTGTCCTCCCTATGTACCATTAAAGATGTCTTCAGTTTCTTCCCACCTGAGAAATGTTTACTaGGTATTTGTCAGTGTTCAT | + |
Preference number: 4 (lower is better) Translates to: GIPCPPYVPLKMSSVSSHLRNVY*VFVSVH Trigger: ATGAACACTGACAAATACCCAGTAAACATTTCTCAG...GTGGGAAGAAACTGAAGACATCTTTAATGGTACATAGGGAGGACAGGGTATTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | ACAATTCAATGTATTCTCTTAGAAAATATTCCCTCATCCAAGGCTCAGGGAATACTGATGTTCCTTCTGTaGCCCAGTCCAAATCTTCAG | + |
Preference number: 4 (lower is better) Translates to: TIQCILLENIPSSKAQGILMFLL*PSPNLQ Trigger: CTGAAGATTTGGACTGGGCCACAGAAGGAACATCAG...TATTCCCTGAGCCTTGGATGAGGGAATATTTTCTAAGAGAATACATTGAATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | AATGAGAGCACATGGAATAATGCTGATTACTGGCTTCATTCTAGTCTGTGCTCTGGAAACTTCATTTTCTaGGCACCGATCACAATCAAA | + |
Preference number: 4 (lower is better) Translates to: NESTWNNADYWLHSSLCSGNFIF*APITIK Trigger: TTTGATTGTGATCGGTGCCCAGAAAATGAAGTTTCC...AGAGCACAGACTAGAATGAAGCCAGTAATCAGCATTATTCCATGTGCTCTCATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CAA 72 bp | TCTTCCCAACAAGTCTTCTTGTCTCCCAGAATTTCCTaGTTACAAGGGACTACCAGCCTCATTTTTAGAAAA | + |
Preference number: 4 (lower is better) Translates to: SSQQVFLSPRIS*LQGTTSLIFRK Trigger: TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAAGAAGACTTGTTGGGAAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR GCA 90 bp | AATGAGAGCACATGGAATAATGCTGATTACTGGCTTCATTCTAGTCTGTGCTCTCAGATTCCATGTCTTTaGATTTCTTCTCTCAAGTCT | + |
Preference number: 4 (lower is better) Translates to: NESTWNNADYWLHSSLCSQIPCL*ISSLKS Trigger: AGACTTGAGAGAAGAAATGCAAAGACATGGAATCTG...AGAGCACAGACTAGAATGAAGCCAGTAATCAGCATTATTCCATGTGCTCTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR GCA 90 bp | AACGGCTCAGATAGAACTGCTCTTGTCAGTATGTTTGCTTTTGTGCATGCATTTCAGATTCCATGTCTTTaGATTTCTTCTCTCAAGTCT | + |
Preference number: 4 (lower is better) Translates to: NGSDRTALVSMFAFVHAFQIPCL*ISSLKS Trigger: AGACTTGAGAGAAGAAATGCAAAGACATGGAATCTG...AAATGCATGCACAAAAGCAAACATACTGACAAGAGCAGTTCTATCTGAGCCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR GCA 90 bp | TTCTGTCGAGGTCTCCTCTACTTTGGTAACCCAGTTTCCTTCACTTACTTTTTCCTTGTCATGTATATCTaGATGTCTTTTGGGATCATA | + |
Preference number: 4 (lower is better) Translates to: FCRGLLYFGNPVSFTYFFLVMYI*MSFGII Trigger: TATGATCCCAAAAGACATGCAGATATACATGACAAG...GAAAAAGTAAGTGAAGGAAACTGGGTTACCAAAGTAGAGGAGACCTCGACAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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CDS-3UTR GCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAAACTATGTCAAAATTGTaGAGTGCTGTCCATTCCGAT | + |
Preference number: 4 (lower is better) Translates to: LSPRISLLQGTTSLIFRKTMSKL*SAVHSD Trigger: ATCGGAATGGACAGCACTGCACAATTTTGACATAGT...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAAATGGGTTCAGTTACATaGCAGAAGATGAGAGAAAAC | + |
Preference number: 4 (lower is better) Translates to: LSPRISLLQGTTSLIFRKMGSVT*QKMREN Trigger: GTTTTCTCTCATCTTCTGCCATGTAACTGAACCCAT...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | AACGGCTCAGATAGAACTGCTCTTGTCAGTATGTTTGCTTTTGTGCATGCATTTCAGGTTAGGATTAAATaGTCCAAAGAAAAGCTTTGG | + |
Preference number: 4 (lower is better) Translates to: NGSDRTALVSMFAFVHAFQVRIK*SKEKLW Trigger: CCAAAGCTTTTCTTTGGACCATTTAATCCTAACCTG...AAATGCATGCACAAAAGCAAACATACTGACAAGAGCAGTTCTATCTGAGCCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 |
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CDS-3UTR CCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAAGGAAACTTCATTTTCTaGGCACCGATCACAATCAAA | + |
Preference number: 4 (lower is better) Translates to: LSPRISLLQGTTSLIFRKGNFIF*APITIK Trigger: TTTGATTGTGATCGGTGCCCAGAAAATGAAGTTTCC...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | AATGAGAGCACATGGAATAATGCTGATTACTGGCTTCATTCTAGTCTGTGCTCTTATCTGCTGTTTCATTaGAAACTTCATTTTCTGGGC | + |
Preference number: 4 (lower is better) Translates to: NESTWNNADYWLHSSLCSYLLFH*KLHFLG Trigger: GCCCAGAAAATGAAGTTTCCAATGAAACAGCAGATA...AGAGCACAGACTAGAATGAAGCCAGTAATCAGCATTATTCCATGTGCTCTCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CAA 72 bp | ACAGTTCATATGTGCTCTTGTTGTATCTATGGGACCTaGGACATAATCAAGTTTTCACAGATTCCAGGTCAT | + |
Preference number: 4 (lower is better) Translates to: TVHMCSCCIYGT*DIIKFSQIPGH Trigger: ATGACCTGGAATCTGTGAAAACTTGATTATGTCCAAGGTCCCATAGATACAACAAGAGCACATATGAACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR GCA 90 bp | GTCTTCAGTTTCTTCCCACACAGAACTACCTCTAATTTATTGTTAAGGAGCACTCAGATTCCATGTCTTTaGATTTCTTCTCTCAAGTCT | + |
Preference number: 4 (lower is better) Translates to: VFSFFPHRTTSNLLLRSTQIPCL*ISSLKS Trigger: AGACTTGAGAGAAGAAATGCAAAGACATGGAATCTG...AGTGCTCCTTAACAATAAATTAGAGGTAGTTCTGTGTGGGAAGAAACTGAAGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR GCA 90 bp | ACAATTCAATGTATTCTCTTAGAAAATATTCCCTCATCCAAGGCTCAGGGAATAGTCAAAATTGTGCAGTaGTGTCCATTCCGATGTGTT | + |
Preference number: 4 (lower is better) Translates to: TIQCILLENIPSSKAQGIVKIVQ*CPFRCV Trigger: AACACATCGGAATGGACAGCACTGCACAATTTTGAC...TATTCCCTGAGCCTTGGATGAGGGAATATTTTCTAAGAGAATACATTGAATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | AACGGCTCAGATAGAACTGCTCTTGTCAGTATGTTTGCTTTTGTGCATGCATTTCTATCAAAGACATGTTaGGTAAAAGATCAGGATTCT | + |
Preference number: 4 (lower is better) Translates to: NGSDRTALVSMFAFVHAFLSKTC*VKDQDS Trigger: AGAATCCTGATCTTTTACCCAACATGTCTTTGATAG...AAATGCATGCACAAAAGCAAACATACTGACAAGAGCAGTTCTATCTGAGCCGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | GTCTTCAGTTTCTTCCCACACAGAACTACCTCTAATTTATTGTTAAGGAGCACTCAGGTTAGGATTAAATaGTCCAAAGAAAAGCTTTGG | + |
Preference number: 4 (lower is better) Translates to: VFSFFPHRTTSNLLLRSTQVRIK*SKEKLW Trigger: CCAAAGCTTTTCTTTGGACCATTTAATCCTAACCTG...AGTGCTCCTTAACAATAAATTAGAGGTAGTTCTGTGTGGGAAGAAACTGAAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 |
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CDS-3UTR CCA 90 bp | GTCTTCAGTTTCTTCCCACACAGAACTACCTCTAATTTATTGTTAAGGAGCACTTATCTGCTGTTTCATTaGAAACTTCATTTTCTGGGC | + |
Preference number: 4 (lower is better) Translates to: VFSFFPHRTTSNLLLRSTYLLFH*KLHFLG Trigger: GCCCAGAAAATGAAGTTTCCAATGAAACAGCAGATA...AGTGCTCCTTAACAATAAATTAGAGGTAGTTCTGTGTGGGAAGAAACTGAAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAATATCTGCTGTTTCATTaGAAACTTCATTTTCTGGGC | + |
Preference number: 4 (lower is better) Translates to: LSPRISLLQGTTSLIFRKYLLFH*KLHFLG Trigger: GCCCAGAAAATGAAGTTTCCAATGAAACAGCAGATA...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | TTGTCTCCCAGAATTTCCTTGTTACAAGGGACTACCAGCCTCATTTTTAGAAAAGGGTTTTCTCTAAGTTaGCATATTTATCACCTGTAC | + |
Preference number: 4 (lower is better) Translates to: LSPRISLLQGTTSLIFRKGFSLS*HIYHLY Trigger: GTACAGGTGATAAATATGCCAACTTAGAGAAAACCC...TTTTCTAAAAATGAGGCTGGTAGTCCCTTGTAACAAGGAAATTCTGGGAGACAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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3UTR CAA 72 bp | TCTTTCATTACTTCTTCTGTCGAGGTCTCCTCTACTTaGGTAACCCAGTTTCCTTCACTTACTTTTTCAATT | + |
Preference number: 4 (lower is better) Translates to: SFITSSVEVSST*VTQFPSLTFSI Trigger: AATTGAAAAAGTAAGTGAAGGAAACTGGGTTACCAAAGTAGAGGAGACCTCGACAGAAGAAGTAATGAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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CDS-3UTR GCA 90 bp | CATGATCATATATACACTATGGAAAGCTCAGGAACTGTTATCAATGTGTCACTTACTATGTCAAAATTGTaGAGTGCTGTCCATTCCGAT | + |
Preference number: 4 (lower is better) Translates to: HDHIYTMESSGTVINVSLTMSKL*SAVHSD Trigger: ATCGGAATGGACAGCACTGCACAATTTTGACATAGT...AAGTGACACATTGATAACAGTTCCTGAGCTTTCCATAGTGTATATATGATCATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233198.2 ENSMUST00000233547.2 |
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CDS-3UTR CCA 90 bp | ACAATTCAATGTATTCTCTTAGAAAATATTCCCTCATCCAAGGCTCAGGGAATAATGGGTTCAGTTACATaGCAGAAGATGAGAGAAAAC | + |
Preference number: 4 (lower is better) Translates to: TIQCILLENIPSSKAQGIMGSVT*QKMREN Trigger: GTTTTCTCTCATCTTCTGCCATGTAACTGAACCCAT...TATTCCCTGAGCCTTGGATGAGGGAATATTTTCTAAGAGAATACATTGAATTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | GTCTTCAGTTTCTTCCCACACAGAACTACCTCTAATTTATTGTTAAGGAGCACTCTATCAAAGACATGTTaGGTAAAAGATCAGGATTCT | + |
Preference number: 4 (lower is better) Translates to: VFSFFPHRTTSNLLLRSTLSKTC*VKDQDS Trigger: AGAATCCTGATCTTTTACCCAACATGTCTTTGATAG...AGTGCTCCTTAACAATAAATTAGAGGTAGTTCTGTGTGGGAAGAAACTGAAGAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | GTCTTCAGTTTCTTCCCACACAGAACTACCTCTAATTTATTGTTAAGGAGCACTCTGAGAAATGTTTACTaGGTATTTGTCAGTGTTCAT | + |
Preference number: 4 (lower is better) Translates to: VFSFFPHRTTSNLLLRSTLRNVY*VFVSVH Trigger: ATGAACACTGACAAATACCCAGTAAACATTTCTCAG...AGTGCTCCTTAACAATAAATTAGAGGTAGTTCTGTGTGGGAAGAAACTGAAGAC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | GATCTTAATTCAGGATGTTTTTCAACACTACAGACTCCAAAACAACTTCCTCCCCTGAGAAATGTTTACTaGGTATTTGTCAGTGTTCAT | + |
Preference number: 4 (lower is better) Translates to: DLNSGCFSTLQTPKQLPPLRNVY*VFVSVH Trigger: ATGAACACTGACAAATACCCAGTAAACATTTCTCAG...GGGAGGAAGTTGTTTTGGAGTCTGTAGTGTTGAAAAACATCCTGAATTAAGATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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CDS-3UTR GCA 90 bp | CTCAGGAACTGTTATCAATGTGTCACTTGGAATGTCTTCAATTATACATTTCTCCAGATTCCATGTCTTTaGATTTCTTCTCTCAAGTCT | + |
Preference number: 4 (lower is better) Translates to: LRNCYQCVTWNVFNYTFLQIPCL*ISSLKS Trigger: AGACTTGAGAGAAGAAATGCAAAGACATGGAATCTG...GAGAAATGTATAATTGAAGACATTCCAAGTGACACATTGATAACAGTTCCTGAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233198.2 ENSMUST00000233547.2 |
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CDS-3UTR GCA 90 bp | TTACCCACCTGTTATCAATGTGTCACTTGGAATGTCTTCAATTATACATTTCTCATCAAAGCAGCAGTCTaGTGTTTCATTCTGATGAAT | + |
Preference number: 4 (lower is better) Translates to: LPTCYQCVTWNVFNYTFLIKAAV*CFILMN Trigger: ATTCATCAGAATGAAACAGCAGACTGCTGCTTTGAT...GAGAAATGTATAATTGAAGACATTCCAAGTGACACATTGATAACAGGTGGGTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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CDS-3UTR GCA 90 bp | CATGATCATATATACACTATGGAAAGCTCAGGAACTGTTATCAATGTGTCACTTATCAAAGCAGCAGTCTaGTGTTTCATTCTGATGAAT | + |
Preference number: 4 (lower is better) Translates to: HDHIYTMESSGTVINVSLIKAAV*CFILMN Trigger: ATTCATCAGAATGAAACAGCAGACTGCTGCTTTGAT...AAGTGACACATTGATAACAGTTCCTGAGCTTTCCATAGTGTATATATGATCATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233198.2 ENSMUST00000233547.2 |
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CDS-3UTR GCA 90 bp | ACAATTCAATGTATTCTCTTAGAAAATATTCCCTCATCCAAGGCTCAGGGAATAATCAAAGCAGCAGTCTaGTGTTTCATTCTGATGAAT | + |
Preference number: 4 (lower is better) Translates to: TIQCILLENIPSSKAQGIIKAAV*CFILMN Trigger: ATTCATCAGAATGAAACAGCAGACTGCTGCTTTGAT...TATTCCCTGAGCCTTGGATGAGGGAATATTTTCTAAGAGAATACATTGAATTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | CATGATCATATATACACTATGGAAAGCTCAGGAACTGTTATCAATGTGTCACTTTATCTGCTGTTTCATTaGAAACTTCATTTTCTGGGC | + |
Preference number: 4 (lower is better) Translates to: HDHIYTMESSGTVINVSLYLLFH*KLHFLG Trigger: GCCCAGAAAATGAAGTTTCCAATGAAACAGCAGATA...AAGTGACACATTGATAACAGTTCCTGAGCTTTCCATAGTGTATATATGATCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233198.2 ENSMUST00000233547.2 |
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CDS-3UTR CCA 90 bp | CATGATCATATATACACTATGGAAAGCTCAGGAACTGTTATCAATGTGTCACTTGGGTTTTCTCTAAGTTaGCATATTTATCACCTGTAC | + |
Preference number: 4 (lower is better) Translates to: HDHIYTMESSGTVINVSLGFSLS*HIYHLY Trigger: GTACAGGTGATAAATATGCCAACTTAGAGAAAACCC...AAGTGACACATTGATAACAGTTCCTGAGCTTTCCATAGTGTATATATGATCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233198.2 ENSMUST00000233547.2 |
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CDS-3UTR CCA 90 bp | TTACCCACCTGTTATCAATGTGTCACTTGGAATGTCTTCAATTATACATTTCTCGGGTTTTCTCTAAGTTaGCATATTTATCACCTGTAC | + |
Preference number: 4 (lower is better) Translates to: LPTCYQCVTWNVFNYTFLGFSLS*HIYHLY Trigger: GTACAGGTGATAAATATGCCAACTTAGAGAAAACCC...GAGAAATGTATAATTGAAGACATTCCAAGTGACACATTGATAACAGGTGGGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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CDS-3UTR CCA 90 bp | CTCAGGAACTGTTATCAATGTGTCACTTGGAATGTCTTCAATTATACATTTCTCCTGAGAAATGTTTACTaGGTATTTGTCAGTGTTCAT | + |
Preference number: 4 (lower is better) Translates to: LRNCYQCVTWNVFNYTFLLRNVY*VFVSVH Trigger: ATGAACACTGACAAATACCCAGTAAACATTTCTCAG...GAGAAATGTATAATTGAAGACATTCCAAGTGACACATTGATAACAGTTCCTGAG 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233198.2 ENSMUST00000233547.2 |
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CDS TCA 90 bp | CCTGAATCCAGCAGTACACGTCACACTACACATGGACGAGGGAACTaGTGTTCCTTCTGTGGCCCAGTCCAAATCTTCAGATATATGAAG | + |
Preference number: 5 (lower is better) Translates to: PESSSTRHTTHGRGN*CSFCGPVQIFRYMK Trigger: CTTCATATATCTGAAGATTTGGACTGGGCCACAGAAGGAACATCAGTTCCCTCGTCCATGTGTAGTGTGACGTGTACTGCTGGATTCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS TCA 90 bp | CACAATCAAAGCAGCAGTCTGCTGTTTCATTCTGATGAATTTTCCTaGATCCAGCAGTACACGTCACACTACACATGGACGAGGGAACTG | + |
Preference number: 5 (lower is better) Translates to: HNQSSSLLFHSDEFS*IQQYTSHYTWTREL Trigger: CAGTTCCCTCGTCCATGTGTAGTGTGACGTGTACTGCTGGATTCAGGAAAATTCATCAGAATGAAACAGCAGACTGCTGCTTTGATTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS TCA 90 bp | CAGATTCCATGTCTTTGCATTTCTTCTCTCAAGTCTGATAGAAACTaGATACCCTGGTCATCATCTGAGATGACCAGTCCTATCCAGGCC | + |
Preference number: 5 (lower is better) Translates to: QIPCLCISSLKSDRN*IPWSSSEMTSPIQA Trigger: GGCCTGGATAGGACTGGTCATCTCAGATGATGACCAGGGTATTCAGTTTCTATCAGACTTGAGAGAAGAAATGCAAAGACATGGAATCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS TCA 90 bp | TGGGACAAGTGTGTGTCCTTGGTGGCTACCTTTGGTGTCCTAGACTaGATTGACATTTTTAACGAAGTTTTCCATGATGGTCCTGTAAGG | + |
Preference number: 5 (lower is better) Translates to: WDKCVSLVATFGVLD*IDIFNEVFHDGPVR Trigger: CCTTACAGGACCATCATGGAAAACTTCGTTAAAAATGTCAATTCAGTCTAGGACACCAAAGGTAGCCACCAAGGACACACACTTGTCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS CCA 90 bp | TATCACCTGTACAACTCACACACTGTTCCATATCTGCTGTTTCATTaGAAACTTCATTTTCTGGGCACCGATCACAATCAAAGCAGCAGT | + |
Preference number: 5 (lower is better) Translates to: YHLYNSHTVPYLLFH*KLHFLGTDHNQSSS Trigger: ACTGCTGCTTTGATTGTGATCGGTGCCCAGAAAATGAAGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTGAGTTGTACAGGTGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CAA 90 bp | GGAATACCCTGTCCTCCCTATGTACCATTAAAGATGTCTTCAGTTTCTTCCCACATATCTGCTGTTTCATaGGAAACTTCATTTTCTGGG | + |
Preference number: 5 (lower is better) Translates to: GIPCPPYVPLKMSSVSSHISAVS*ETSFSG Trigger: CCCAGAAAATGAAGTTTCCAATGAAACAGCAGATAT...GTGGGAAGAAACTGAAGACATCTTTAATGGTACATAGGGAGGACAGGGTATTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CAA 90 bp | AACGGCTCAGATAGAACTGCTCTTGTCAGTATGTTTGCTTTTGTGCATGCATTTATATCTGCTGTTTCATaGGAAACTTCATTTTCTGGG | + |
Preference number: 5 (lower is better) Translates to: NGSDRTALVSMFAFVHAFISAVS*ETSFSG Trigger: CCCAGAAAATGAAGTTTCCAATGAAACAGCAGATAT...AAATGCATGCACAAAAGCAAACATACTGACAAGAGCAGTTCTATCTGAGCCGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CAA 90 bp | GTCTTCAGTTTCTTCCCACACAGAACTACCTCTAATTTATTGTTAAGGAGCACTATATCTGCTGTTTCATaGGAAACTTCATTTTCTGGG | + |
Preference number: 5 (lower is better) Translates to: VFSFFPHRTTSNLLLRSTISAVS*ETSFSG Trigger: CCCAGAAAATGAAGTTTCCAATGAAACAGCAGATAT...AGTGCTCCTTAACAATAAATTAGAGGTAGTTCTGTGTGGGAAGAAACTGAAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS-3UTR CAA 90 bp | TTACCCACCTGTTATCAATGTGTCACTTGGAATGTCTTCAATTATACATTTCTCATATCTGCTGTTTCATaGGAAACTTCATTTTCTGGG | + |
Preference number: 5 (lower is better) Translates to: LPTCYQCVTWNVFNYTFLISAVS*ETSFSG Trigger: CCCAGAAAATGAAGTTTCCAATGAAACAGCAGATAT...GAGAAATGTATAATTGAAGACATTCCAAGTGACACATTGATAACAGGTGGGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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CDS-3UTR CAA 90 bp | TTACCCACCTGTTATCAATGTGTCACTTGGAATGTCTTCAATTATACATTTCTCTGGGTTTTCTCTAAGTaGGCATATTTATCACCTGTA | + |
Preference number: 5 (lower is better) Translates to: LPTCYQCVTWNVFNYTFLWVFSK*AYLSPV Trigger: TACAGGTGATAAATATGCCAACTTAGAGAAAACCCA...GAGAAATGTATAATTGAAGACATTCCAAGTGACACATTGATAACAGGTGGGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233835.2 |
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CDS TCA 72 bp | AGCAGTACACGTCACACTACACATGGACGAGGGAACTaGTGTTCCTTCTGTGGCCCAGTCCAAATCTTCAGA | + |
Preference number: 6 (lower is better) Translates to: SSTRHTTHGRGN*CSFCGPVQIFR Trigger: TCTGAAGATTTGGACTGGGCCACAGAAGGAACATCAGTTCCCTCGTCCATGTGTAGTGTGACGTGTACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS TCA 72 bp | TCTGAGATGACCAGTCCTATCCAGGCCCATCTAAAATaGAGCATCAAGGAGACCATGGCATGGGACAAGTGT | + |
Preference number: 6 (lower is better) Translates to: SEMTSPIQAHLK*SIKETMAWDKC Trigger: ACACTTGTCCCATGCCATGGTCTCCTTGATGCTTCATTTTAGATGGGCCTGGATAGGACTGGTCATCTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS CAA 90 bp | GCCAGGAATGACACAGCTCTTTGGAGGCAGTGGGTTTTCTCTAAGTaGGCATATTTATCACCTGTACAACTCACACACTGTTCCATATCT | + |
Preference number: 6 (lower is better) Translates to: ARNDTALWRQWVFSK*AYLSPVQLTHCSIS Trigger: AGATATGGAACAGTGTGTGAGTTGTACAGGTGATAAATATGCCAACTTAGAGAAAACCCACTGCCTCCAAAGAGCTGTGTCATTCCTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS CCA 72 bp | CACTACACATGGACGAGGGAACTGATGTTCCTTCTGTaGCCCAGTCCAAATCTTCAGATATATGAAGTTGTT | + |
Preference number: 6 (lower is better) Translates to: HYTWTRELMFLL*PSPNLQIYEVV Trigger: AACAACTTCATATATCTGAAGATTTGGACTGGGCCACAGAAGGAACATCAGTTCCCTCGTCCATGTGTAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS TCA 72 bp | TGGATTTCAGCATGGAAGACACCTGCTGACAGTCATTaGATATTCCTTTGCGTACTTCCGTTTGCTGAGATT | + |
Preference number: 6 (lower is better) Translates to: WISAWKTPADSH*IFLCVLPFAEI Trigger: AATCTCAGCAAACGGAAGTACGCAAAGGAATATTCAATGACTGTCAGCAGGTGTCTTCCATGCTGAAATCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS CCA 72 bp | GGGAAACTGGTCATGGTCACTCAGGTTAGGATTAAATaGTCCAAAGAAAAGCTTTGGTGTCCTAGACTGAAT | + |
Preference number: 6 (lower is better) Translates to: GKLVMVTQVRIK*SKEKLWCPRLN Trigger: ATTCAGTCTAGGACACCAAAGCTTTTCTTTGGACCATTTAATCCTAACCTGAGTGACCATGACCAGTTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 |
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CDS CCA 72 bp | TTCCATATCTGCTGTTTCATTGGAAACTTCATTTTCTaGGCACCGATCACAATCAAAGCAGCAGTCTGCTGT | + |
Preference number: 6 (lower is better) Translates to: FHICCFIGNFIF*APITIKAAVCC Trigger: ACAGCAGACTGCTGCTTTGATTGTGATCGGTGCCCAGAAAATGAAGTTTCCAATGAAACAGCAGATATGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS CCA 72 bp | ACACAGCTCTTTGGAGGCAGTGGGTTTTCTCTAAGTTaGCATATTTATCACCTGTACAACTCACACACTGTT | + |
Preference number: 6 (lower is better) Translates to: TQLFGGSGFSLS*HIYHLYNSHTV Trigger: AACAGTGTGTGAGTTGTACAGGTGATAAATATGCCAACTTAGAGAAAACCCACTGCCTCCAAAGAGCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS CAA 72 bp | TTCTGTGGCCCAGTCCAAATCTTCAGATATATGAAGTaGTTGGCTCTGTTGGAAACAAGGCAAATAGCTTCC | + |
Preference number: 6 (lower is better) Translates to: FCGPVQIFRYMK*LALLETRQIAS Trigger: GGAAGCTATTTGCCTTGTTTCCAACAGAGCCAACAACTTCATATATCTGAAGATTTGGACTGGGCCACAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS TCA 72 bp | TGTCTTTGCATTTCTTCTCTCAAGTCTGATAGAAACTaGATACCCTGGTCATCATCTGAGATGACCAGTCCT | + |
Preference number: 6 (lower is better) Translates to: CLCISSLKSDRN*IPWSSSEMTSP Trigger: AGGACTGGTCATCTCAGATGATGACCAGGGTATTCAGTTTCTATCAGACTTGAGAGAAGAAATGCAAAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS TCA 72 bp | GTAAATATCCTGGATTTCAGCATGGAAGACACCTGCTaGCAGTCATTGAATATTCCTTTGCGTACTTCCGTT | + |
Preference number: 6 (lower is better) Translates to: VNILDFSMEDTC*QSLNIPLRTSV Trigger: AACGGAAGTACGCAAAGGAATATTCAATGACTGTCAGCAGGTGTCTTCCATGCTGAAATCCAGGATATTTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS TCA 72 bp | TGTGTGTCCTTGGTGGCTACCTTTGGTGTCCTAGACTaGATTGACATTTTTAACGAAGTTTTCCATGATGGT | + |
Preference number: 6 (lower is better) Translates to: CVSLVATFGVLD*IDIFNEVFHDG Trigger: ACCATCATGGAAAACTTCGTTAAAAATGTCAATTCAGTCTAGGACACCAAAGGTAGCCACCAAGGACACACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS CAA 72 bp | TGTGGCCCAGTCCAAATCTTCAGATATATGAAGTTGTaGGCTCTGTTGGAAACAAGGCAAATAGCTTCCTAT | + |
Preference number: 6 (lower is better) Translates to: CGPVQIFRYMKL*ALLETRQIASY Trigger: ATAGGAAGCTATTTGCCTTGTTTCCAACAGAGCCAACAACTTCATATATCTGAAGATTTGGACTGGGCCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS CAA 72 bp | GTACAACTCACACACTGTTCCATATCTGCTGTTTCATaGGAAACTTCATTTTCTGGGCACCGATCACAATCA | + |
Preference number: 6 (lower is better) Translates to: VQLTHCSISAVS*ETSFSGHRSQS Trigger: TGATTGTGATCGGTGCCCAGAAAATGAAGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTGAGTTGTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |
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CDS CAA 72 bp | AGAATGCGGTTATTGGCCTTCACAATGGGAGTATCCTaGTACTTCACAAAAGTGACTAGTACTAGACTTGTG | + |
Preference number: 6 (lower is better) Translates to: RMRLLAFTMGVS*YFTKVTSTRLV Trigger: CACAAGTCTAGTACTAGTCACTTTTGTGAAGTACAAGGATACTCCCATTGTGAAGGCCAATAACCGCATTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000170419.3 ENSMUST00000233198.2 ENSMUST00000233547.2 ENSMUST00000233835.2 |