RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN2R88 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000000606

Ensembl transcript IDs: ENSMUST00000022438.12, ENSMUST00000159674.4, ENSMUST00000163019.9, ENSMUST00000232797.2, ENSMUST00000232951.2, ENSMUST00000233126.2, ENSMUST00000233280.2, ENSMUST00000233394.2, ENSMUST00000233651.2, ENSMUST00000233766.2, ENSMUST00000233848.2, ENSMUST00000233920.2

Found 608 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTaGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCTATAC +
Preference number: 1 (lower is better)
Translates to: PWGLPLSWTPLWTCH*TFLSSGTSPFLSLY
Trigger: GTATAGGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CCA 90 bp TTTGAGTCCTGGGACTCTCTCACCTCCCAGGTCTCTGGTGCATTCTaGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACAT +
Preference number: 1 (lower is better)
Translates to: FESWDSLTSQVSGAF*GSHNLLSPVVACLH
Trigger: ATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAGACCTGGGAGGTGAGAGAGTCCCAGGACTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR GCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTaGCTGTTTACATTCTTTCTGCTGGCCCTCAGAGCTTCAGTCCTT +
Preference number: 1 (lower is better)
Translates to: LWCILGFPQSPLSCG*LFTFFLLALRASVL
Trigger: AAGGACTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR GCA 90 bp TCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACATTCTTTCTaGTGGCCCTCAGAGCTTCAGTCCTTTCCCTCAGCCAATACCAGA +
Preference number: 1 (lower is better)
Translates to: SHNLLSPVVACLHSF*WPSELQSFPSANTR
Trigger: TCTGGTATTGGCTGAGGGAAAGGACTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR GCA 90 bp TCTCCATGTGGATACCTCCAACACCCACTTCACCTGACCTCCAAATaGCCTTGGTCCTCCAGTCCCTTGAGGATTAGGTGCATTATCTCT +
Preference number: 1 (lower is better)
Translates to: SPCGYLQHPLHLTSK*PWSSSPLRIRCIIS
Trigger: AGAGATAATGCACCTAATCCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCACATGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CCA 90 bp CACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACATTCTTTCTGCTaGCCCTCAGAGCTTCAGTCCTTTCCCTCAGCCAATACCAGACCA +
Preference number: 1 (lower is better)
Translates to: HNLLSPVVACLHSFC*PSELQSFPSANTRP
Trigger: TGGTCTGGTATTGGCTGAGGGAAAGGACTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR GCA 90 bp CTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTaGCTGTTTGGTGTTCCAGTGTTTGAGAGATCTCAGGGTTCCATA +
Preference number: 1 (lower is better)
Translates to: LYCMCVGGLISAGVC*LFGVPVFERSQGSI
Trigger: TATGGAACCCTGAGATCTCTCAAACACTGGAACACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CCA 90 bp GTGAAAAATACTCCAAATGTGGTCTGCTGCAAGACGCAGGAGACCTaGTTTGGATGTCCAATGAAGAGCAGGGAGCAGAGAAAGCAGAAG +
Preference number: 1 (lower is better)
Translates to: VKNTPNVVCCKTQET*FGCPMKSREQRKQK
Trigger: CTTCTGCTTTCTCTGCTCCCTGCTCTTCATTGGACATCCAAACCAGGTCTCCTGCGTCTTGCAGCAGACCACATTTGGAGTATTTTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR GCA 90 bp ACTGTAGAAACAGACACAGTGAAAAATACTCCAAATGTGGTCTGCTaGAAGACGCAGGAGACCTGGTTTGGATGTCCAATGAAGAGCAGG +
Preference number: 1 (lower is better)
Translates to: TVETDTVKNTPNVVC*KTQETWFGCPMKSR
Trigger: CCTGCTCTTCATTGGACATCCAAACCAGGTCTCCTGCGTCTTGCAGCAGACCACATTTGGAGTATTTTTCACTGTGTCTGTTTCTACAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR TCA 90 bp TATCCCTATACTTCTTTCAGACAGGAACAATATGGGTCAGAATTGTaGCTGTGGGGTGGCAACCCCATCACTTACTTGATGCCCTATCTT +
Preference number: 1 (lower is better)
Translates to: YPYTSFRQEQYGSEL*LWGGNPITYLMPYL
Trigger: AAGATAGGGCATCAAGTAAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTCTGAAAGAAGTATAGGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CCA 90 bp ATAAATGGAGGAGATGTTATCAACCAGATTCCACAGAGAACAAATTaGATTAGGGTACAAATGGGAATGACCAACTTAGGTGCCCCTGTT +
Preference number: 1 (lower is better)
Translates to: INGGDVINQIPQRTN*IRVQMGMTNLGAPV
Trigger: AACAGGGGCACCTAAGTTGGTCATTCCCATTTGTACCCTAATCCAATTTGTTCTCTGTGGAATCTGGTTGATAACATCTCCTCCATTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR TCA 90 bp GTAAGAAAAGTGTTTCTTTACTTATGTACCTTGGTCACAGTATATTaGATGAAGCCAAGGCATGAAATTGGATGCAGCCACTCCATGAAA +
Preference number: 1 (lower is better)
Translates to: VRKVFLYLCTLVTVY*MKPRHEIGCSHSMK
Trigger: TTTCATGGAGTGGCTGCATCCAATTTCATGCCTTGGCTTCATTCAATATACTGTGACCAAGGTACATAAGTAAAGAAACACTTTTCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CCA 90 bp AATGACAATCTTCCCATGCTCAGATTGTATATCTCTGTCAATAAATaGAGGAGATGTTATCAACCAGATTCCACAGAGAACAAATTGGAT +
Preference number: 1 (lower is better)
Translates to: NDNLPMLRLYISVNK*RRCYQPDSTENKLD
Trigger: ATCCAATTTGTTCTCTGTGGAATCTGGTTGATAACATCTCCTCCATTTATTGACAGAGATATACAATCTGAGCATGGGAAGATTGTCATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCGGCCTCCCACTGAGCTaGACCCCACTTTGGACCTGT +
Preference number: 2 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTGLPLS*TPLWTC
Trigger: ACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCC...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCCCTCCACAACCACCATaGCCTTCCCCCTGGTGCTAT +
Preference number: 2 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTPPQPP*PSPWCY
Trigger: ATAGCACCAGGGGGAAGGTCATGGTGGTTGTGGAGG...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCAACACCCACTTCACCTaGCCTCCAAATGCCCTTGGT +
Preference number: 2 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTNTHFT*PPNALG
Trigger: ACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTT...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCGTCTCTGGTGCATTCTaGGGTTCCCACAATCTCCTC +
Preference number: 2 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTVSGAF*GSHNLL
Trigger: GAGGAGATTGTGGGAACCCCAGAATGCACCAGAGAC...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCCTGCTCCATATTTCATaGCTTCACGCTACCTCACCC +
Preference number: 2 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTLLHIS*LHATSP
Trigger: GGGTGAGGTAGCGTGAAGGCATGAAATATGGAGCAG...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTGGCCTCCCACTGAGCTaGACCCCACTTTGGACCTGT +
Preference number: 2 (lower is better)
Translates to: PPTPTSPDLQMPLVLQSLGLPLS*TPLWTC
Trigger: ACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCC...AAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCGCAGGAGACCTGGTTTaGATGTCCAATGAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTAGDLV*MSNEEQ
Trigger: CTGCTCTTCATTGGACATCCAAACCAGGTCTCCTGC...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp CCTCACCCCGTCTCCATGTGGATACCTCCAACACCCACTTCACCTGACCTCCAACCTCCACAACCACCATaGCCTTCCCCCTGGTGCTAT +
Preference number: 2 (lower is better)
Translates to: PHPVSMWIPPTPTSPDLQPPQPP*PSPWCY
Trigger: ATAGCACCAGGGGGAAGGTCATGGTGGTTGTGGAGG...TTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCACATGGAGACGGGGTGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGGGCCTCCCACTGAGCTaGACCCCACTTTGGACCTGT +
Preference number: 2 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQGLPLS*TPLWTC
Trigger: ACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCC...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCTTTTTCAGCTGTTGCTaGGTCTTTTGGAGGGCAGTC +
Preference number: 2 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTFFSCC*VFWRAV
Trigger: GACTGCCCTCCAAAAGACCCAGCAACAGCTGAAAAA...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGCCTCCACAACCACCATaGCCTTCCCCCTGGTGCTAT +
Preference number: 2 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQPPQPP*PSPWCY
Trigger: ATAGCACCAGGGGGAAGGTCATGGTGGTTGTGGAGG...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTGGCCTCCCACTGAGCTaGACCCCACTTTGGACCTGT +
Preference number: 2 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFGLPLS*TPLWTC
Trigger: ACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCC...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCCACTCCATGAAAGCATaGGGGATAATGGTGATTACT +
Preference number: 2 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTHSMKA*GIMVIT
Trigger: AGTAATCACCATTATCCCTCATGCTTTCATGGAGTG...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTAACACCCACTTCACCTaGCCTCCAAATGCCCTTGGT +
Preference number: 2 (lower is better)
Translates to: PPTPTSPDLQMPLVLQSLNTHFT*PPNALG
Trigger: ACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTT...AAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCAGACAGGGAGAAAGGTaGTCCAGACACTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: PLSWTPLWTCHWTFLSSGRQGER*SRHCRT
Trigger: TGTTCTGCAGTGTCTGGATCACCTTTCTCCCTGTCT...GCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp AGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCAGACAGGGAGAAAGGTaGTCCAGACACTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: SNSVRPWGLPLSWTPLWTRQGER*SRHCRT
Trigger: TGTTCTGCAGTGTCTGGATCACCTTTCTCCCTGTCT...GGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR GCA 90 bp CACCCCCATACACCCTCTGACTGCTCCATATTTCATGCCTTCACGCTACCTCACCACCTGACCTCCAAATaGCCTTGGTCCTCCAGTCCC +
Preference number: 2 (lower is better)
Translates to: HPHTPSDCSIFHAFTLPHHLTSK*PWSSSP
Trigger: GGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTG...GTGAGGTAGCGTGAAGGCATGAAATATGGAGCAGTCAGAGGGTGTATGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTCTTTGGACCTGTCACTaGACCTTCCTTTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: PPTPTSPDLQMPLVLQSLLWTCH*TFLSSG
Trigger: GCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAG...AAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CCTCACCCCGTCTCCATGTGGATACCTCCAACACCCACTTCACCTGACCTCCAATGTTGCTGGGTCTTTTaGAGGGCAGTCATGATGGGC +
Preference number: 2 (lower is better)
Translates to: PHPVSMWIPPTPTSPDLQCCWVF*RAVMMG
Trigger: GCCCATCATGACTGCCCTCCAAAAGACCCAGCAACA...TTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCACATGGAGACGGGGTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCTCTCATTCTTCTTCCTaGAGTAGTGAGCTTGAAAGC +
Preference number: 2 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTSHSSS*SSELES
Trigger: GCTTTCAAGCTCACTACTCCAGGAAGAAGAATGAGA...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp CCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTACCCCATCACTTACTTaGTGCCCTATCTTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: PPTPTSPDLQMPLVLQSLTPSLT*CPIFLL
Trigger: CAGCAGGAAGATAGGGCATCAAGTAAGTGATGGGGT...AAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CCTCACCCCGTCTCCATGTGGATACCTCCAACACCCACTTCACCTGACCTCCAAGGTTTGGATGTCCAATaGAGAGCAGGGAGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: PHPVSMWIPPTPTSPDLQGLDVQ*RAGSRE
Trigger: TTCTCTGCTCCCTGCTCTTCATTGGACATCCAAACC...TTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCACATGGAGACGGGGTGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR GCA 90 bp CCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTTCAGCTGGTGTATGCTaGCTGTTTGGTGTTCCAGTG +
Preference number: 2 (lower is better)
Translates to: PPTPTSPDLQMPLVLQSLSAGVC*LFGVPV
Trigger: CACTGGAACACCAAACAGGCAGCATACACCAGCTGA...AAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp CCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTGAGGATTAGGACTCCAAATGTGGTCTaGTGCAAGACGCAGGAGACC +
Preference number: 2 (lower is better)
Translates to: PLHLTSKCPWSSSPLRIRTPNVV*CKTQET
Trigger: GGTCTCCTGCGTCTTGCAGCAGACCACATTTGGAGT...CCTAATCCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGCTTTGGACCTGTCACTaGACCTTCCTTTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQLWTCH*TFLSSG
Trigger: GCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAG...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp GCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCGGCCTCCCACTGAGCTaGACCCCACTTTGGACCTGT +
Preference number: 2 (lower is better)
Translates to: AFPNSAKGVSCFCPLVGSGLPLS*TPLWTC
Trigger: ACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCC...GCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCTCACAGTATATTGAATaGAGCCAAGGCATGAAATTG +
Preference number: 2 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTSQYIE*SQGMKL
Trigger: CAATTTCATGCCTTGGCTTCATTCAATATACTGTGA...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTTGGTGTTCCAGTGTTTaGGAGATCTCAGGGTTCCAT +
Preference number: 2 (lower is better)
Translates to: PPTPTSPDLQMPLVLQSLWCSSV*EISGFH
Trigger: ATGGAACCCTGAGATCTCTCAAACACTGGAACACCA...AAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CCTCACCCCGTCTCCATGTGGATACCTCCAACACCCACTTCACCTGACCTCCAATGGTGTTCCAGTGTTTaGGAGATCTCAGGGTTCCAT +
Preference number: 2 (lower is better)
Translates to: PHPVSMWIPPTPTSPDLQWCSSV*EISGFH
Trigger: ATGGAACCCTGAGATCTCTCAAACACTGGAACACCA...TTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCACATGGAGACGGGGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp CTCAGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGCCCAGGTCCCTACATTaGTCATTGTGTCTTTTCACA +
Preference number: 2 (lower is better)
Translates to: LSNSVRPWGLPLSWTPLWPRSLH*SLCLFT
Trigger: TGTGAAAAGACACAATGAGCAATGTAGGGACCTGGG...CCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp CTCAGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGTGTTTACATTCTTTCTaGTGGCCCTCAGAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: LSNSVRPWGLPLSWTPLWCLHSF*WPSELQ
Trigger: CTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACA...CCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp CCTCACCCCGTCTCCATGTGGATACCTCCAACACCCACTTCACCTGACCTCCAAGACTTTTTCAGCTGTTaGTGGGTCTTTTGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: PHPVSMWIPPTPTSPDLQDFFSC*WVFWRA
Trigger: TGCCCTCCAAAAGACCCAGCAACAGCTGAAAAAGTC...TTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCACATGGAGACGGGGTGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCAGCTGGTGTATGCTaGCTGTTTGGTGTTCCAGTG +
Preference number: 2 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQSAGVC*LFGVPV
Trigger: CACTGGAACACCAAACAGGCAGCATACACCAGCTGA...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTACACCTGACCTCCAAATaGCCTTGGTCCTCCAGTCCC +
Preference number: 2 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLHLTSK*PWSSSP
Trigger: GGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTG...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTTGTTGCTGGGTCTTTTaGAGGGCAGTCATGATGGGC +
Preference number: 2 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFCCWVF*RAVMMG
Trigger: GCCCATCATGACTGCCCTCCAAAAGACCCAGCAACA...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTTTTTTCAGCTGTTGCTaGGTCTTTTGGAGGGCAGTC +
Preference number: 2 (lower is better)
Translates to: PPTPTSPDLQMPLVLQSLFFSCC*VFWRAV
Trigger: GACTGCCCTCCAAAAGACCCAGCAACAGCTGAAAAA...AAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGG
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CAA 90 bp TCTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTaGCCTGTTTACATTCTTTCTGCTGGCCCTCAGAGCTTCAGTCCT +
Preference number: 2 (lower is better)
Translates to: SLVHSGVPTISSLLW*PVYILSAGPQSFSP
Trigger: AGGACTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACCCCATCACTTACTTaGTGCCCTATCTTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFTPSLT*CPIFLL
Trigger: CAGCAGGAAGATAGGGCATCAAGTAAGTGATGGGGT...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTGGTGTTCCAGTGTTTaGGAGATCTCAGGGTTCCAT +
Preference number: 2 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQWCSSV*EISGFH
Trigger: ATGGAACCCTGAGATCTCTCAAACACTGGAACACCA...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp AGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCCAACATGGAAGGCAATaGCAGAGCCTTTATTGCAAA +
Preference number: 2 (lower is better)
Translates to: SNSVRPWGLPLSWTPLWTQHGRQ*QSLYCK
Trigger: TTTGCAATAAAGGCTCTGTCATTGCCTTCCATGTTG...GGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp CCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCCAACATGGAAGGCAATaGCAGAGCCTTTATTGCAAA +
Preference number: 2 (lower is better)
Translates to: PLSWTPLWTCHWTFLSSGQHGRQ*QSLYCK
Trigger: TTTGCAATAAAGGCTCTGTCATTGCCTTCCATGTTG...GCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp GTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGAGACAGGGAGAAAGGTaGTCCAGACACTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: VLYCMCVGGLISAGVCCLRQGER*SRHCRT
Trigger: TGTTCTGCAGTGTCTGGATCACCTTTCTCCCTGTCT...CAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR GCA 90 bp CCTCACCCCGTCTCCATGTGGATACCTCCAACACCCACTTCACCTGACCTCCAATGTTTACATTCTTTCTaGTGGCCCTCAGAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: PHPVSMWIPPTPTSPDLQCLHSF*WPSELQ
Trigger: CTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACA...TTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCACATGGAGACGGGGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTTCAGCTGGTGTATGCTaGCTGTTTGGTGTTCCAGTG +
Preference number: 2 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFSAGVC*LFGVPV
Trigger: CACTGGAACACCAAACAGGCAGCATACACCAGCTGA...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp CCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTATATCAGCTGGTGTATaGTGCCTGTTTGGTGTTCCA +
Preference number: 2 (lower is better)
Translates to: PPTPTSPDLQMPLVLQSLISAGV*CLFGVP
Trigger: TGGAACACCAAACAGGCAGCATACACCAGCTGATAT...AAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp CCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTAATGACCAACTTAGGTaGCCCTGTTACCAACATCTC +
Preference number: 2 (lower is better)
Translates to: PPTPTSPDLQMPLVLQSLNDQLR*PCYQHL
Trigger: GAGATGTTGGTAACAGGGGCACCTAAGTTGGTCATT...AAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp CCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCATCTCCTCTCTCCTGTaGTTGCCTGTTTACATTCTT +
Preference number: 2 (lower is better)
Translates to: PLSWTPLWTCHWTFLSSGISSLL*LPVYIL
Trigger: AAGAATGTAAACAGGCAACCACAGGAGAGAGGAGAT...GCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp AGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCCAGACAGGAACAATATaGGTCAGAATTGTGACTGTG +
Preference number: 2 (lower is better)
Translates to: SNSVRPWGLPLSWTPLWTQTGTI*VRIVTV
Trigger: CACAGTCACAATTCTGACCCATATTGTTCCTGTCTG...GGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTGAGGATTAGGTTTTTCAGCTGTTGCTaGGTCTTTTGGAGGGCAGTC +
Preference number: 2 (lower is better)
Translates to: PLHLTSKCPWSSSPLRIRFFSCC*VFWRAV
Trigger: GACTGCCCTCCAAAAGACCCAGCAACAGCTGAAAAA...CCTAATCCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTGAGGATTAGGGCTCTTGAGAGGCAGTaGGTTTTCTCTATGTTGGCA +
Preference number: 2 (lower is better)
Translates to: PLHLTSKCPWSSSPLRIRALERQ*VFSMLA
Trigger: TGCCAACATAGAGAAAACCCACTGCCTCTCAAGAGC...CCTAATCCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTGCAGGAGACCTGGTTTaGATGTCCAATGAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFAGDLV*MSNEEQ
Trigger: CTGCTCTTCATTGGACATCCAAACCAGGTCTCCTGC...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp AGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTCTCATTCTTCTTCCTaGAGTAGTGAGCTTGAAAGC +
Preference number: 2 (lower is better)
Translates to: SNSVRPWGLPLSWTPLWTSHSSS*SSELES
Trigger: GCTTTCAAGCTCACTACTCCAGGAAGAAGAATGAGA...GGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR CAA 90 bp AGTTCCTCTCCCTACTGTCAGGTATTTCATCTAAGGTCCCTTCCTTaGAGTCCTGGGACTCTCTCACCTCCCAGGTCTCTGGTGCATTCT +
Preference number: 2 (lower is better)
Translates to: SSSPYCQVFHLRSLP*SPGTLSPPRSLVHS
Trigger: AGAATGCACCAGAGACCTGGGAGGTGAGAGAGTCCCAGGACTCAAAGGAAGGGACCTTAGATGAAATACCTGACAGTAGGGAGAGGAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CTCAGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGTTGGTCACAGTATATTaGATGAAGCCAAGGCATGAA +
Preference number: 2 (lower is better)
Translates to: LSNSVRPWGLPLSWTPLWLVTVY*MKPRHE
Trigger: TTCATGCCTTGGCTTCATTCAATATACTGTGACCAA...CCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp TCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTACCCCATCACTTACTTaGTGCCCTATCTTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: SSTVCVLGASYQLVYAACTPSLT*CPIFLL
Trigger: CAGCAGGAAGATAGGGCATCAAGTAAGTGATGGGGT...ACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CACCCCCATACACCCTCTGACTGCTCCATATTTCATGCCTTCACGCTACCTCACTGGTGTTCCAGTGTTTaGGAGATCTCAGGGTTCCAT +
Preference number: 2 (lower is better)
Translates to: HPHTPSDCSIFHAFTLPHWCSSV*EISGFH
Trigger: ATGGAACCCTGAGATCTCTCAAACACTGGAACACCA...GTGAGGTAGCGTGAAGGCATGAAATATGGAGCAGTCAGAGGGTGTATGGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CCTCACCCCGTCTCCATGTGGATACCTCCAACACCCACTTCACCTGACCTCCAATTAGTACTAGAATTGTaGTGGCTGAGAAGGACAGTG +
Preference number: 2 (lower is better)
Translates to: PHPVSMWIPPTPTSPDLQLVLEL*WLRRTV
Trigger: CACTGTCCTTCTCAGCCATCACAATTCTAGTACTAA...TTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCACATGGAGACGGGGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp CCTCACCCCGTCTCCATGTGGATACCTCCAACACCCACTTCACCTGACCTCCAACAACATGGAAGGCAATaGCAGAGCCTTTATTGCAAA +
Preference number: 2 (lower is better)
Translates to: PHPVSMWIPPTPTSPDLQQHGRQ*QSLYCK
Trigger: TTTGCAATAAAGGCTCTGTCATTGCCTTCCATGTTG...TTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCACATGGAGACGGGGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR GCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTGACTTTTTCAGCTGTTaGTGGGTCTTTTGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFDFFSC*WVFWRA
Trigger: TGCCCTCCAAAAGACCCAGCAACAGCTGAAAAAGTC...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTACTCCAAATGTGGTCTaGTGCAAGACGCAGGAGACC +
Preference number: 2 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGTPNVV*CKTQET
Trigger: GGTCTCCTGCGTCTTGCAGCAGACCACATTTGGAGT...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR GCA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCACTCCAAATGTGGTCTaGTGCAAGACGCAGGAGACC +
Preference number: 2 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPTPNVV*CKTQET
Trigger: GGTCTCCTGCGTCTTGCAGCAGACCACATTTGGAGT...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR GCA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGAATGACCAACTTAGGTaGCCCTGTTACCAACATCTC +
Preference number: 2 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQNDQLR*PCYQHL
Trigger: GAGATGTTGGTAACAGGGGCACCTAAGTTGGTCATT...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTGTCTCTGGTGCATTCTaGGGTTCCCACAATCTCCTC +
Preference number: 2 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGVSGAF*GSHNLL
Trigger: GAGGAGATTGTGGGAACCCCAGAATGCACCAGAGAC...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTAGTCTCTGGTGCATTCTaGGGTTCCCACAATCTCCTC +
Preference number: 2 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLVSGAF*GSHNLL
Trigger: GAGGAGATTGTGGGAACCCCAGAATGCACCAGAGAC...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp GCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCGTCTCTGGTGCATTCTaGGGTTCCCACAATCTCCTC +
Preference number: 2 (lower is better)
Translates to: AFPNSAKGVSCFCPLVGSVSGAF*GSHNLL
Trigger: GAGGAGATTGTGGGAACCCCAGAATGCACCAGAGAC...GCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CCTCACCCCGTCTCCATGTGGATACCTCCAACACCCACTTCACCTGACCTCCAACAGACAGGAACAATATaGGTCAGAATTGTGACTGTG +
Preference number: 2 (lower is better)
Translates to: PHPVSMWIPPTPTSPDLQQTGTI*VRIVTV
Trigger: CACAGTCACAATTCTGACCCATATTGTTCCTGTCTG...TTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCACATGGAGACGGGGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp GACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTCTTTGGACCTGTCACTaGACCTTCCTTTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: DRNNMGQNCDCGVATPSLLWTCH*TFLSSG
Trigger: GCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAG...AAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCCTTTGGACCTGTCACTaGACCTTCCTTTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPLWTCH*TFLSSG
Trigger: GCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAG...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTACTTTGGACCTGTCACTaGACCTTCCTTTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLLWTCH*TFLSSG
Trigger: GCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAG...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAAGGCCTCCCACTGAGCTaGACCCCACTTTGGACCTGT +
Preference number: 2 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQGLPLS*TPLWTC
Trigger: ACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCC...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp GACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTTGTTGCTGGGTCTTTTaGAGGGCAGTCATGATGGGC +
Preference number: 2 (lower is better)
Translates to: DRNNMGQNCDCGVATPSLCCWVF*RAVMMG
Trigger: GCCCATCATGACTGCCCTCCAAAAGACCCAGCAACA...AAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATGTTGCTGGGTCTTTTaGAGGGCAGTCATGATGGGC +
Preference number: 2 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLCCWVF*RAVMMG
Trigger: GCCCATCATGACTGCCCTCCAAAAGACCCAGCAACA...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CCTCACCCCGTCTCCATGTGGATACCTCCAACACCCACTTCACCTGACCTCCAAGCTGTTTCTGTCCATTaGTTGGGAGCAAATATCTAC +
Preference number: 2 (lower is better)
Translates to: PHPVSMWIPPTPTSPDLQAVSVH*LGANIY
Trigger: GTAGATATTTGCTCCCAACCAATGGACAGAAACAGC...TTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCACATGGAGACGGGGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp AGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTATTGGCCTTCACAATaGGAGTATCCTTGTACTTCA +
Preference number: 2 (lower is better)
Translates to: SNSVRPWGLPLSWTPLWTYWPSQ*EYPCTS
Trigger: TGAAGTACAAGGATACTCCCATTGTGAAGGCCAATA...GGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTTATCCCAGGACAACATaGAAGGCAATGACAGAGCCT +
Preference number: 2 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFYPRTT*KAMTEP
Trigger: AGGCTCTGTCATTGCCTTCCATGTTGTCCTGGGATA...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTACCCCATCACTTACTTaGTGCCCTATCTTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGTPSLT*CPIFLL
Trigger: CAGCAGGAAGATAGGGCATCAAGTAAGTGATGGGGT...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGGCAAATATCTACACCTaGCTTTTTCAGCTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQANIYT*LFQLLL
Trigger: CAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGC...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCCCTCAGAGCTTCAGTCCTTTGGTTTGGATGTCCAATaGAGAGCAGGGAGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: PVVACLHSFCWPSELQSFGLDVQ*RAGSRE
Trigger: TTCTCTGCTCCCTGCTCTTCATTGGACATCCAAACC...AAAGGACTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACAGGCAACCACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTAAGACAGGGAGAAAGGTaGTCCAGACACTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLRQGER*SRHCRT
Trigger: TGTTCTGCAGTGTCTGGATCACCTTTCTCCCTGTCT...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAACCTCCACAACCACCATaGCCTTCCCCCTGGTGCTAT +
Preference number: 2 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQPPQPP*PSPWCY
Trigger: ATAGCACCAGGGGGAAGGTCATGGTGGTTGTGGAGG...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR GCA 90 bp GTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGAGGCATGAAATTGGATaGAGCCACTCCATGAAAGCA +
Preference number: 2 (lower is better)
Translates to: VLYCMCVGGLISAGVCCLRHEIG*SHSMKA
Trigger: TGCTTTCATGGAGTGGCTGCATCCAATTTCATGCCT...CAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp GTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGCCCAGGTCCCTACATTaGTCATTGTGTCTTTTCACA +
Preference number: 2 (lower is better)
Translates to: VLYCMCVGGLISAGVCCLPRSLH*SLCLFT
Trigger: TGTGAAAAGACACAATGAGCAATGTAGGGACCTGGG...CAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGCAGACAGGAACAATATaGGTCAGAATTGTGACTGTG +
Preference number: 2 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQQTGTI*VRIVTV
Trigger: CACAGTCACAATTCTGACCCATATTGTTCCTGTCTG...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCGGCCTCCCACTGAGCTaGACCCCACTTTGGACCTGT +
Preference number: 2 (lower is better)
Translates to: LIQQKVSAVSVHWLGANIGLPLS*TPLWTC
Trigger: ACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCC...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGGCTGTTTCTGTCCATTaGTTGGGAGCAAATATCTAC +
Preference number: 2 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQAVSVH*LGANIY
Trigger: GTAGATATTTGCTCCCAACCAATGGACAGAAACAGC...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CCTCACCCCGTCTCCATGTGGATACCTCCAACACCCACTTCACCTGACCTCCAATATTGGCCTTCACAATaGGAGTATCCTTGTACTTCA +
Preference number: 2 (lower is better)
Translates to: PHPVSMWIPPTPTSPDLQYWPSQ*EYPCTS
Trigger: TGAAGTACAAGGATACTCCCATTGTGAAGGCCAATA...TTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCACATGGAGACGGGGTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp TGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCAGGAGACCTGGTTTaGATGTCCAATGAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: WKSSTVCVLGASYQLVYAAGDLV*MSNEEQ
Trigger: CTGCTCTTCATTGGACATCCAAACCAGGTCTCCTGC...AGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR CAA 90 bp GTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTaGGTGTTCCAGTGTTTGAGAGATCTCAGGGTTCCATATTACCTG +
Preference number: 2 (lower is better)
Translates to: VCVLGASYQLVYAAC*VFQCLRDLRVPYYL
Trigger: CAGGTAATATGGAACCCTGAGATCTCTCAAACACTGGAACACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTCACTCCATGAAAGCATaGGGGATAATGGTGATTACT +
Preference number: 2 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFHSMKA*GIMVIT
Trigger: AGTAATCACCATTATCCCTCATGCTTTCATGGAGTG...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTGAGGATTAGGTTGGTCACAGTATATTaGATGAAGCCAAGGCATGAA +
Preference number: 2 (lower is better)
Translates to: PLHLTSKCPWSSSPLRIRLVTVY*MKPRHE
Trigger: TTCATGCCTTGGCTTCATTCAATATACTGTGACCAA...CCTAATCCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTGCAAATATCTACACCTaGCTTTTTCAGCTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFANIYT*LFQLLL
Trigger: CAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGC...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp GACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTTGGTGTTCCAGTGTTTaGGAGATCTCAGGGTTCCAT +
Preference number: 2 (lower is better)
Translates to: DRNNMGQNCDCGVATPSLWCSSV*EISGFH
Trigger: ATGGAACCCTGAGATCTCTCAAACACTGGAACACCA...AAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp ACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTACTTGATAACACCCACTTCACCTaGCCTCCAAATGCCCTTGGT +
Preference number: 2 (lower is better)
Translates to: TIWVRIVTVGWQPHHLLDNTHFT*PPNALG
Trigger: ACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTT...ATCAAGTAAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTTTAGTACTAGAATTGTaGTGGCTGAGAAGGACAGTG +
Preference number: 2 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFLVLEL*WLRRTV
Trigger: CACTGTCCTTCTCAGCCATCACAATTCTAGTACTAA...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp GTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTAGTACTAGAATTGTaGTGGCTGAGAAGGACAGTG +
Preference number: 2 (lower is better)
Translates to: VLYCMCVGGLISAGVCCLLVLEL*WLRRTV
Trigger: CACTGTCCTTCTCAGCCATCACAATTCTAGTACTAA...CAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR GCA 90 bp TCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTAGGCATGAAATTGGATaGAGCCACTCCATGAAAGCA +
Preference number: 2 (lower is better)
Translates to: SSTVCVLGASYQLVYAACRHEIG*SHSMKA
Trigger: TGCTTTCATGGAGTGGCTGCATCCAATTTCATGCCT...ACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp GCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCGACTTTTTCAGCTGTTaGTGGGTCTTTTGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: AFPNSAKGVSCFCPLVGSDFFSC*WVFWRA
Trigger: TGCCCTCCAAAAGACCCAGCAACAGCTGAAAAAGTC...GCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CACCCCCATACACCCTCTGACTGCTCCATATTTCATGCCTTCACGCTACCTCACATCTCCTCTCTCCTGTaGTTGCCTGTTTACATTCTT +
Preference number: 2 (lower is better)
Translates to: HPHTPSDCSIFHAFTLPHISSLL*LPVYIL
Trigger: AAGAATGTAAACAGGCAACCACAGGAGAGAGGAGAT...GTGAGGTAGCGTGAAGGCATGAAATATGGAGCAGTCAGAGGGTGTATGGGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp TGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTGCTGGGTCTTTTGGAGGCTTTGGACCTGTCACTaGACCTTCCTTTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: WEQISTPDFFSCCWVFWRLWTCH*TFLSSG
Trigger: GCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAG...CCTCCAAAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp GTCCTCATACATGATGGCCCTACTCATCAACTTCTTTCAGCCTTCCCTAATTCAACCTCCAAATGCCCTTaGTCCTCCAGTCCCTTGAGG +
Preference number: 2 (lower is better)
Translates to: VLIHDGPTHQLLSAFPNSTSKCP*SSSPLR
Trigger: CCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGT...TGAATTAGGGAAGGCTGAAAGAAGTTGATGAGTAGGGCCATCATGTATGAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp GACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTGCTCTTGAGAGGCAGTaGGTTTTCTCTATGTTGGCA +
Preference number: 2 (lower is better)
Translates to: DRNNMGQNCDCGVATPSLALERQ*VFSMLA
Trigger: TGCCAACATAGAGAAAACCCACTGCCTCTCAAGAGC...AAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp CCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTGAGGATTAGGCCACAGAGAACAAATTaGATTAGGGTACAAATGGGA +
Preference number: 2 (lower is better)
Translates to: PLHLTSKCPWSSSPLRIRPQRTN*IRVQMG
Trigger: TCCCATTTGTACCCTAATCCAATTTGTTCTCTGTGG...CCTAATCCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp CCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCATCTCTGTCAATAAATaGAGGAGATGTTATCAACCA +
Preference number: 2 (lower is better)
Translates to: PLSWTPLWTCHWTFLSSGISVNK*RRCYQP
Trigger: TGGTTGATAACATCTCCTCCATTTATTGACAGAGAT...GCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp CTCAGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGATCTCTGTCAATAAATaGAGGAGATGTTATCAACCA +
Preference number: 2 (lower is better)
Translates to: LSNSVRPWGLPLSWTPLWISVNK*RRCYQP
Trigger: TGGTTGATAACATCTCCTCCATTTATTGACAGAGAT...CCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATATCCCAGGACAACATaGAAGGCAATGACAGAGCCT +
Preference number: 2 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLYPRTT*KAMTEP
Trigger: AGGCTCTGTCATTGCCTTCCATGTTGTCCTGGGATA...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCTATCCCAGGACAACATaGAAGGCAATGACAGAGCCT +
Preference number: 2 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPYPRTT*KAMTEP
Trigger: AGGCTCTGTCATTGCCTTCCATGTTGTCCTGGGATA...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTTGTGTCCTTATGAATaGGACCATTTTTCACCAAAG +
Preference number: 2 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQLCPYE*DHFSPK
Trigger: CTTTGGTGAAAAATGGTCTCATTCATAAGGACACAA...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTTTGGTCACAGTATATTaGATGAAGCCAAGGCATGAA +
Preference number: 2 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFLVTVY*MKPRHE
Trigger: TTCATGCCTTGGCTTCATTCAATATACTGTGACCAA...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CACCCCCATACACCCTCTGACTGCTCCATATTTCATGCCTTCACGCTACCTCACTTGGTCACAGTATATTaGATGAAGCCAAGGCATGAA +
Preference number: 2 (lower is better)
Translates to: HPHTPSDCSIFHAFTLPHLVTVY*MKPRHE
Trigger: TTCATGCCTTGGCTTCATTCAATATACTGTGACCAA...GTGAGGTAGCGTGAAGGCATGAAATATGGAGCAGTCAGAGGGTGTATGGGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CTTCTTCCTGGAGTAGTGAGCTTGAAAGCCATGACCACAGTTATTGTTTTGGCCGGTTTGGATGTCCAATaGAGAGCAGGGAGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: LLPGVVSLKAMTTVIVLAGLDVQ*RAGSRE
Trigger: TTCTCTGCTCCCTGCTCTTCATTGGACATCCAAACC...GGCCAAAACAATAACTGTGGTCATGGCTTTCAAGCTCACTACTCCAGGAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR GCA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTAAGGCATGAAATTGGATaGAGCCACTCCATGAAAGCA +
Preference number: 2 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLRHEIG*SHSMKA
Trigger: TGCTTTCATGGAGTGGCTGCATCCAATTTCATGCCT...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTAGGCATGAAATTGGATaGAGCCACTCCATGAAAGCA +
Preference number: 2 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGRHEIG*SHSMKA
Trigger: TGCTTTCATGGAGTGGCTGCATCCAATTTCATGCCT...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTCCCAGGTCCCTACATTaGTCATTGTGTCTTTTCACA +
Preference number: 2 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGPRSLH*SLCLFT
Trigger: TGTGAAAAGACACAATGAGCAATGTAGGGACCTGGG...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp CCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCCCTCAGAGCTTCAGTCCTTTCCCAGGTCCCTACATTaGTCATTGTGTCTTTTCACA +
Preference number: 2 (lower is better)
Translates to: PVVACLHSFCWPSELQSFPRSLH*SLCLFT
Trigger: TGTGAAAAGACACAATGAGCAATGTAGGGACCTGGG...AAAGGACTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACAGGCAACCACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp GCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCTGTTTACATTCTTTCTaGTGGCCCTCAGAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: AFPNSAKGVSCFCPLVGSCLHSF*WPSELQ
Trigger: CTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACA...GCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCTGTTTACATTCTTTCTaGTGGCCCTCAGAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPCLHSF*WPSELQ
Trigger: CTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACA...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp ACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTACTTGATTCAGCTGGTGTATGCTaGCTGTTTGGTGTTCCAGTG +
Preference number: 2 (lower is better)
Translates to: TIWVRIVTVGWQPHHLLDSAGVC*LFGVPV
Trigger: CACTGGAACACCAAACAGGCAGCATACACCAGCTGA...ATCAAGTAAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp GACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTATATCAGCTGGTGTATaGTGCCTGTTTGGTGTTCCA +
Preference number: 2 (lower is better)
Translates to: DRNNMGQNCDCGVATPSLISAGV*CLFGVP
Trigger: TGGAACACCAAACAGGCAGCATACACCAGCTGATAT...AAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCATATCAGCTGGTGTATaGTGCCTGTTTGGTGTTCCA +
Preference number: 2 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPISAGV*CLFGVP
Trigger: TGGAACACCAAACAGGCAGCATACACCAGCTGATAT...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp GTCCTCATACATGATGGCCCTACTCATCAACTTCTTTCAGCCTTCCCTAATTCAACTCCAAATGTGGTCTaGTGCAAGACGCAGGAGACC +
Preference number: 2 (lower is better)
Translates to: VLIHDGPTHQLLSAFPNSTPNVV*CKTQET
Trigger: GGTCTCCTGCGTCTTGCAGCAGACCACATTTGGAGT...TGAATTAGGGAAGGCTGAAAGAAGTTGATGAGTAGGGCCATCATGTATGAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR GCA 90 bp GTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCAATGACCAACTTAGGTaGCCCTGTTACCAACATCTC +
Preference number: 2 (lower is better)
Translates to: VPTISSLLWLPVYILSAGNDQLR*PCYQHL
Trigger: GAGATGTTGGTAACAGGGGCACCTAAGTTGGTCATT...GCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCAGTCTCTGGTGCATTCTaGGGTTCCCACAATCTCCTC +
Preference number: 2 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPVSGAF*GSHNLL
Trigger: GAGGAGATTGTGGGAACCCCAGAATGCACCAGAGAC...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp GTCCTCATACATGATGGCCCTACTCATCAACTTCTTTCAGCCTTCCCTAATTCACTTTGGACCTGTCACTaGACCTTCCTTTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: VLIHDGPTHQLLSAFPNSLWTCH*TFLSSG
Trigger: GCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAG...TGAATTAGGGAAGGCTGAAAGAAGTTGATGAGTAGGGCCATCATGTATGAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCACTTTGGACCTGTCACTaGACCTTCCTTTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPLWTCH*TFLSSG
Trigger: GCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAG...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp GTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGAGAATTGTGTCCTTATaGATGAGACCATTTTTCACC +
Preference number: 2 (lower is better)
Translates to: VLYCMCVGGLISAGVCCLRIVSL*MRPFFT
Trigger: GGTGAAAAATGGTCTCATTCATAAGGACACAATTCT...CAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp GCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCCACTCCATGAAAGCATaGGGGATAATGGTGATTACT +
Preference number: 2 (lower is better)
Translates to: AFPNSAKGVSCFCPLVGSHSMKA*GIMVIT
Trigger: AGTAATCACCATTATCCCTCATGCTTTCATGGAGTG...GCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp TCAGACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACACTCCATGAAAGCATaGGGGATAATGGTGATTACT +
Preference number: 2 (lower is better)
Translates to: SDRNNMGQNCDCGVATPSHSMKA*GIMVIT
Trigger: AGTAATCACCATTATCCCTCATGCTTTCATGGAGTG...TGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp GACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTCACTCCATGAAAGCATaGGGGATAATGGTGATTACT +
Preference number: 2 (lower is better)
Translates to: DRNNMGQNCDCGVATPSLHSMKA*GIMVIT
Trigger: AGTAATCACCATTATCCCTCATGCTTTCATGGAGTG...AAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTTCACAGTATATTGAATaGAGCCAAGGCATGAAATTG +
Preference number: 2 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFSQYIE*SQGMKL
Trigger: CAATTTCATGCCTTGGCTTCATTCAATATACTGTGA...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp GTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTCACAGTATATTGAATaGAGCCAAGGCATGAAATTG +
Preference number: 2 (lower is better)
Translates to: VLYCMCVGGLISAGVCCLSQYIE*SQGMKL
Trigger: CAATTTCATGCCTTGGCTTCATTCAATATACTGTGA...CAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp TCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTCACAGTATATTaGATGAAGCCAAGGCATGAA +
Preference number: 2 (lower is better)
Translates to: SSTVCVLGASYQLVYAACLVTVY*MKPRHE
Trigger: TTCATGCCTTGGCTTCATTCAATATACTGTGACCAA...ACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCAACCCCATCACTTACTTaGTGCCCTATCTTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPTPSLT*CPIFLL
Trigger: CAGCAGGAAGATAGGGCATCAAGTAAGTGATGGGGT...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTGCAAATATCTACACCTaGCTTTTTCAGCTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGANIYT*LFQLLL
Trigger: CAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGC...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTTTAGTACTAGAATTGTaGTGGCTGAGAAGGACAGTG +
Preference number: 2 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGLVLEL*WLRRTV
Trigger: CACTGTCCTTCTCAGCCATCACAATTCTAGTACTAA...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp AGTATAGTGCTTCTGTGCTGTCATAGGCAATACTGTCACTGTACTTCACACTGCAGACAGGGAGAAAGGTaGTCCAGACACTGCAGAACA +
Preference number: 2 (lower is better)
Translates to: SIVLLCCHRQYCHCTSHCRQGER*SRHCRT
Trigger: TGTTCTGCAGTGTCTGGATCACCTTTCTCCCTGTCT...GCAGTGTGAAGTACAGTGACAGTATTGCCTATGACAGCACAGAAGCACTATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR GCA 90 bp GTCCTCATACATGATGGCCCTACTCATCAACTTCTTTCAGCCTTCCCTAATTCATCAGCTGGTGTATGCTaGCTGTTTGGTGTTCCAGTG +
Preference number: 2 (lower is better)
Translates to: VLIHDGPTHQLLSAFPNSSAGVC*LFGVPV
Trigger: CACTGGAACACCAAACAGGCAGCATACACCAGCTGA...TGAATTAGGGAAGGCTGAAAGAAGTTGATGAGTAGGGCCATCATGTATGAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCACTGCTCCATATTTCATaGCTTCACGCTACCTCACCC +
Preference number: 2 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPLLHIS*LHATSP
Trigger: GGGTGAGGTAGCGTGAAGGCATGAAATATGGAGCAG...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp GCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCATCTCCTCTCTCCTGTaGTTGCCTGTTTACATTCTT +
Preference number: 2 (lower is better)
Translates to: AFPNSAKGVSCFCPLVGSISSLL*LPVYIL
Trigger: AAGAATGTAAACAGGCAACCACAGGAGAGAGGAGAT...GCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCGTCTCTGGTGCATTCTaGGGTTCCCACAATCTCCTC +
Preference number: 2 (lower is better)
Translates to: LIQQKVSAVSVHWLGANIVSGAF*GSHNLL
Trigger: GAGGAGATTGTGGGAACCCCAGAATGCACCAGAGAC...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp ATCAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCGTCTCTGGTGCATTCTaGGGTTCCCACAATCTCCTC +
Preference number: 2 (lower is better)
Translates to: INFFQPSLIQQKVSAVSVVSGAF*GSHNLL
Trigger: GAGGAGATTGTGGGAACCCCAGAATGCACCAGAGAC...GACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCCAGACAGGAACAATATaGGTCAGAATTGTGACTGTG +
Preference number: 2 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPQTGTI*VRIVTV
Trigger: CACAGTCACAATTCTGACCCATATTGTTCCTGTCTG...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCTGTTGCTGGGTCTTTTaGAGGGCAGTCATGATGGGC +
Preference number: 2 (lower is better)
Translates to: LIQQKVSAVSVHWLGANICCWVF*RAVMMG
Trigger: GCCCATCATGACTGCCCTCCAAAAGACCCAGCAACA...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp TGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCTGTTTCTGTCCATTaGTTGGGAGCAAATATCTAC +
Preference number: 2 (lower is better)
Translates to: WKSSTVCVLGASYQLVYAAVSVH*LGANIY
Trigger: GTAGATATTTGCTCCCAACCAATGGACAGAAACAGC...AGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTGGGTTTTCTCTATGTTaGCATACTTATCATATGGAC +
Preference number: 2 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFGFSLC*HTYHMD
Trigger: GTCCATATGATAAGTATGCCAACATAGAGAAAACCC...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp CTTCTTCCTGGAGTAGTGAGCTTGAAAGCCATGACCACAGTTATTGTTTTGGCCGCTCTTGAGAGGCAGTaGGTTTTCTCTATGTTGGCA +
Preference number: 2 (lower is better)
Translates to: LLPGVVSLKAMTTVIVLAALERQ*VFSMLA
Trigger: TGCCAACATAGAGAAAACCCACTGCCTCTCAAGAGC...GGCCAAAACAATAACTGTGGTCATGGCTTTCAAGCTCACTACTCCAGGAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp TGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTGCTGGGTCTTTTGGAGGGCTCTTGAGAGGCAGTaGGTTTTCTCTATGTTGGCA +
Preference number: 2 (lower is better)
Translates to: WEQISTPDFFSCCWVFWRALERQ*VFSMLA
Trigger: TGCCAACATAGAGAAAACCCACTGCCTCTCAAGAGC...CCTCCAAAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp GTCCTCATACATGATGGCCCTACTCATCAACTTCTTTCAGCCTTCCCTAATTCAGCAGGAGACCTGGTTTaGATGTCCAATGAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: VLIHDGPTHQLLSAFPNSAGDLV*MSNEEQ
Trigger: CTGCTCTTCATTGGACATCCAAACCAGGTCTCCTGC...TGAATTAGGGAAGGCTGAAAGAAGTTGATGAGTAGGGCCATCATGTATGAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCAGCAGGAGACCTGGTTTaGATGTCCAATGAAGAGCAG +
Preference number: 2 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPAGDLV*MSNEEQ
Trigger: CTGCTCTTCATTGGACATCCAAACCAGGTCTCCTGC...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCTCTCATTCTTCTTCCTaGAGTAGTGAGCTTGAAAGC +
Preference number: 2 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPSHSSS*SSELES
Trigger: GCTTTCAAGCTCACTACTCCAGGAAGAAGAATGAGA...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR CAA 90 bp CCCAATTTCCCCCACCCTGTCCACTTTCCTTCCCAGGTCCCTACATaGCTCATTGTGTCTTTTCACATAAATGTGAAGAGCCTTATATTG +
Preference number: 2 (lower is better)
Translates to: PNFPHPVHFPSQVPT*LIVSFHINVKSLIL
Trigger: CAATATAAGGCTCTTCACATTTATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGAAAGTGGACAGGGTGGGGGAAATTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp TCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGTGTCCTTATGAATaGGACCATTTTTCACCAAAG +
Preference number: 2 (lower is better)
Translates to: SSTVCVLGASYQLVYAACLCPYE*DHFSPK
Trigger: CTTTGGTGAAAAATGGTCTCATTCATAAGGACACAA...ACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp TCTCCCTACTGTCAGGTATTTCATCTAAGGTCCCTTCCTTTGAGTCCTGGGACTCACTCCATGAAAGCATaGGGGATAATGGTGATTACT +
Preference number: 2 (lower is better)
Translates to: SPYCQVFHLRSLPLSPGTHSMKA*GIMVIT
Trigger: AGTAATCACCATTATCCCTCATGCTTTCATGGAGTG...AGTCCCAGGACTCAAAGGAAGGGACCTTAGATGAAATACCTGACAGTAGGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp TCAGACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCATTGGTCACAGTATATTaGATGAAGCCAAGGCATGAA +
Preference number: 2 (lower is better)
Translates to: SDRNNMGQNCDCGVATPSLVTVY*MKPRHE
Trigger: TTCATGCCTTGGCTTCATTCAATATACTGTGACCAA...TGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCGGTTTGGATGTCCAATaGAGAGCAGGGAGCAGAGAA +
Preference number: 2 (lower is better)
Translates to: LIQQKVSAVSVHWLGANIGLDVQ*RAGSRE
Trigger: TTCTCTGCTCCCTGCTCTTCATTGGACATCCAAACC...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR GCA 90 bp ACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTACTTGATCCCAGGTCCCTACATTaGTCATTGTGTCTTTTCACA +
Preference number: 2 (lower is better)
Translates to: TIWVRIVTVGWQPHHLLDPRSLH*SLCLFT
Trigger: TGTGAAAAGACACAATGAGCAATGTAGGGACCTGGG...ATCAAGTAAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp AGTATAGTGCTTCTGTGCTGTCATAGGCAATACTGTCACTGTACTTCACACTGCGACTTTTTCAGCTGTTaGTGGGTCTTTTGGAGGGCA +
Preference number: 2 (lower is better)
Translates to: SIVLLCCHRQYCHCTSHCDFFSC*WVFWRA
Trigger: TGCCCTCCAAAAGACCCAGCAACAGCTGAAAAAGTC...GCAGTGTGAAGTACAGTGACAGTATTGCCTATGACAGCACAGAAGCACTATACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCTCAGCTGGTGTATGCTaGCTGTTTGGTGTTCCAGTG +
Preference number: 2 (lower is better)
Translates to: LIQQKVSAVSVHWLGANISAGVC*LFGVPV
Trigger: CACTGGAACACCAAACAGGCAGCATACACCAGCTGA...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp ACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTACTTGATATATCAGCTGGTGTATaGTGCCTGTTTGGTGTTCCA +
Preference number: 2 (lower is better)
Translates to: TIWVRIVTVGWQPHHLLDISAGV*CLFGVP
Trigger: TGGAACACCAAACAGGCAGCATACACCAGCTGATAT...ATCAAGTAAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp TGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTGCTGGGTCTTTTGGAGGAATGACCAACTTAGGTaGCCCTGTTACCAACATCTC +
Preference number: 2 (lower is better)
Translates to: WEQISTPDFFSCCWVFWRNDQLR*PCYQHL
Trigger: GAGATGTTGGTAACAGGGGCACCTAAGTTGGTCATT...CCTCCAAAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp GTCCTCATACATGATGGCCCTACTCATCAACTTCTTTCAGCCTTCCCTAATTCATTTTTCAGCTGTTGCTaGGTCTTTTGGAGGGCAGTC +
Preference number: 2 (lower is better)
Translates to: VLIHDGPTHQLLSAFPNSFFSCC*VFWRAV
Trigger: GACTGCCCTCCAAAAGACCCAGCAACAGCTGAAAAA...TGAATTAGGGAAGGCTGAAAGAAGTTGATGAGTAGGGCCATCATGTATGAGGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTACCACAGAGAACAAATTaGATTAGGGTACAAATGGGA +
Preference number: 2 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLPQRTN*IRVQMG
Trigger: TCCCATTTGTACCCTAATCCAATTTGTTCTCTGTGG...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTCCACAGAGAACAAATTaGATTAGGGTACAAATGGGA +
Preference number: 2 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGPQRTN*IRVQMG
Trigger: TCCCATTTGTACCCTAATCCAATTTGTTCTCTGTGG...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp AGTATAGTGCTTCTGTGCTGTCATAGGCAATACTGTCACTGTACTTCACACTGCTATCCCAGGACAACATaGAAGGCAATGACAGAGCCT +
Preference number: 2 (lower is better)
Translates to: SIVLLCCHRQYCHCTSHCYPRTT*KAMTEP
Trigger: AGGCTCTGTCATTGCCTTCCATGTTGTCCTGGGATA...GCAGTGTGAAGTACAGTGACAGTATTGCCTATGACAGCACAGAAGCACTATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR CAA 90 bp TCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATaGGTTGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: SAFPNSAKGVSCFCP*VGSKYLHLTFSAVA
Trigger: AGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp GTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCAGAATTGTGTCCTTATaGATGAGACCATTTTTCACC +
Preference number: 2 (lower is better)
Translates to: VPTISSLLWLPVYILSAGRIVSL*MRPFFT
Trigger: GGTGAAAAATGGTCTCATTCATAAGGACACAATTCT...GCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp TCAGACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCAAGAATTGTGTCCTTATaGATGAGACCATTTTTCACC +
Preference number: 2 (lower is better)
Translates to: SDRNNMGQNCDCGVATPSRIVSL*MRPFFT
Trigger: GGTGAAAAATGGTCTCATTCATAAGGACACAATTCT...TGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCTCACAGTATATTGAATaGAGCCAAGGCATGAAATTG +
Preference number: 2 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPSQYIE*SQGMKL
Trigger: CAATTTCATGCCTTGGCTTCATTCAATATACTGTGA...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTTCACAGTATATTGAATaGAGCCAAGGCATGAAATTG +
Preference number: 2 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGSQYIE*SQGMKL
Trigger: CAATTTCATGCCTTGGCTTCATTCAATATACTGTGA...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp GTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCTCACAGTATATTGAATaGAGCCAAGGCATGAAATTG +
Preference number: 2 (lower is better)
Translates to: VPTISSLLWLPVYILSAGSQYIE*SQGMKL
Trigger: CAATTTCATGCCTTGGCTTCATTCAATATACTGTGA...GCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCCCTCAGAGCTTCAGTCCTTTTCACAGTATATTGAATaGAGCCAAGGCATGAAATTG +
Preference number: 2 (lower is better)
Translates to: PVVACLHSFCWPSELQSFSQYIE*SQGMKL
Trigger: CAATTTCATGCCTTGGCTTCATTCAATATACTGTGA...AAAGGACTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACAGGCAACCACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp AGTATAGTGCTTCTGTGCTGTCATAGGCAATACTGTCACTGTACTTCACACTGCCCCAGGTCCCTACATTaGTCATTGTGTCTTTTCACA +
Preference number: 2 (lower is better)
Translates to: SIVLLCCHRQYCHCTSHCPRSLH*SLCLFT
Trigger: TGTGAAAAGACACAATGAGCAATGTAGGGACCTGGG...GCAGTGTGAAGTACAGTGACAGTATTGCCTATGACAGCACAGAAGCACTATACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp GTCCTCATACATGATGGCCCTACTCATCAACTTCTTTCAGCCTTCCCTAATTCATGTTTACATTCTTTCTaGTGGCCCTCAGAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: VLIHDGPTHQLLSAFPNSCLHSF*WPSELQ
Trigger: CTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACA...TGAATTAGGGAAGGCTGAAAGAAGTTGATGAGTAGGGCCATCATGTATGAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATGTTTACATTCTTTCTaGTGGCCCTCAGAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPCLHSF*WPSELQ
Trigger: CTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACA...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp GTCCTCATACATGATGGCCCTACTCATCAACTTCTTTCAGCCTTCCCTAATTCAATATCAGCTGGTGTATaGTGCCTGTTTGGTGTTCCA +
Preference number: 2 (lower is better)
Translates to: VLIHDGPTHQLLSAFPNSISAGV*CLFGVP
Trigger: TGGAACACCAAACAGGCAGCATACACCAGCTGATAT...TGAATTAGGGAAGGCTGAAAGAAGTTGATGAGTAGGGCCATCATGTATGAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCTTTTTCAGCTGTTGCTaGGTCTTTTGGAGGGCAGTC +
Preference number: 2 (lower is better)
Translates to: LIQQKVSAVSVHWLGANIFFSCC*VFWRAV
Trigger: GACTGCCCTCCAAAAGACCCAGCAACAGCTGAAAAA...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp TGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGGGTTTTCTCTATGTTaGCATACTTATCATATGGAC +
Preference number: 2 (lower is better)
Translates to: WKSSTVCVLGASYQLVYAGFSLC*HTYHMD
Trigger: GTCCATATGATAAGTATGCCAACATAGAGAAAACCC...AGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp ATTGGTTGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTGCTGGGTCTTTGCTCTTGAGAGGCAGTaGGTTTTCTCTATGTTGGCA +
Preference number: 2 (lower is better)
Translates to: IGWEQISTPDFFSCCWVFALERQ*VFSMLA
Trigger: TGCCAACATAGAGAAAACCCACTGCCTCTCAAGAGC...AAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCAACCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp TCTCCCTACTGTCAGGTATTTCATCTAAGGTCCCTTCCTTTGAGTCCTGGGACTCCACAGAGAACAAATTaGATTAGGGTACAAATGGGA +
Preference number: 2 (lower is better)
Translates to: SPYCQVFHLRSLPLSPGTPQRTN*IRVQMG
Trigger: TCCCATTTGTACCCTAATCCAATTTGTTCTCTGTGG...AGTCCCAGGACTCAAAGGAAGGGACCTTAGATGAAATACCTGACAGTAGGGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp TCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAATGTGAAGAGCCTTTATCCCAGGACAACATaGAAGGCAATGACAGAGCCT +
Preference number: 2 (lower is better)
Translates to: SQVPTLLIVSFHINVKSLYPRTT*KAMTEP
Trigger: AGGCTCTGTCATTGCCTTCCATGTTGTCCTGGGATA...AAGGCTCTTCACATTTATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR CAA 90 bp CCCAAGTATCCCAGGACAACATGGAAGGCAATGACAGAGCCTTTATaGCAAAGAATGACAATCTTCCCATGCTCAGATTGTATATCTCTG +
Preference number: 2 (lower is better)
Translates to: PKYPRTTWKAMTEPL*QRMTIFPCSDCISL
Trigger: CAGAGATATACAATCTGAGCATGGGAAGATTGTCATTCTTTGCAATAAAGGCTCTGTCATTGCCTTCCATGTTGTCCTGGGATACTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp GTCCTCATACATGATGGCCCTACTCATCAACTTCTTTCAGCCTTCCCTAATTCACACTCCATGAAAGCATaGGGGATAATGGTGATTACT +
Preference number: 2 (lower is better)
Translates to: VLIHDGPTHQLLSAFPNSHSMKA*GIMVIT
Trigger: AGTAATCACCATTATCCCTCATGCTTTCATGGAGTG...TGAATTAGGGAAGGCTGAAAGAAGTTGATGAGTAGGGCCATCATGTATGAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAAGCAAATATCTACACCTaGCTTTTTCAGCTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQANIYT*LFQLLL
Trigger: CAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGC...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp AGTATAGTGCTTCTGTGCTGTCATAGGCAATACTGTCACTGTACTTCACACTGCGCAAATATCTACACCTaGCTTTTTCAGCTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: SIVLLCCHRQYCHCTSHCANIYT*LFQLLL
Trigger: CAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGC...GCAGTGTGAAGTACAGTGACAGTATTGCCTATGACAGCACAGAAGCACTATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCAGCAAATATCTACACCTaGCTTTTTCAGCTGTTGCTG +
Preference number: 2 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPANIYT*LFQLLL
Trigger: CAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGC...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp AGTATAGTGCTTCTGTGCTGTCATAGGCAATACTGTCACTGTACTTCACACTGCTTAGTACTAGAATTGTaGTGGCTGAGAAGGACAGTG +
Preference number: 2 (lower is better)
Translates to: SIVLLCCHRQYCHCTSHCLVLEL*WLRRTV
Trigger: CACTGTCCTTCTCAGCCATCACAATTCTAGTACTAA...GCAGTGTGAAGTACAGTGACAGTATTGCCTATGACAGCACAGAAGCACTATACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCACAACATGGAAGGCAATaGCAGAGCCTTTATTGCAAA +
Preference number: 2 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPQHGRQ*QSLYCK
Trigger: TTTGCAATAAAGGCTCTGTCATTGCCTTCCATGTTG...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR GCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCCCCAGGTCCCTACATTaGTCATTGTGTCTTTTCACA +
Preference number: 2 (lower is better)
Translates to: LIQQKVSAVSVHWLGANIPRSLH*SLCLFT
Trigger: TGTGAAAAGACACAATGAGCAATGTAGGGACCTGGG...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp ATCAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCTGTTTACATTCTTTCTaGTGGCCCTCAGAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: INFFQPSLIQQKVSAVSVCLHSF*WPSELQ
Trigger: CTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACA...GACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp ATTGGTTGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTGCTGGGTCTTTTGTTTACATTCTTTCTaGTGGCCCTCAGAGCTTCAG +
Preference number: 2 (lower is better)
Translates to: IGWEQISTPDFFSCCWVFCLHSF*WPSELQ
Trigger: CTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACA...AAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCAACCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp TCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAATGTGAAGAGCCTTAATGACCAACTTAGGTaGCCCTGTTACCAACATCTC +
Preference number: 2 (lower is better)
Translates to: SQVPTLLIVSFHINVKSLNDQLR*PCYQHL
Trigger: GAGATGTTGGTAACAGGGGCACCTAAGTTGGTCATT...AAGGCTCTTCACATTTATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAAATCTCCTCTCTCCTGTaGTTGCCTGTTTACATTCTT +
Preference number: 2 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQISSLL*LPVYIL
Trigger: AAGAATGTAAACAGGCAACCACAGGAGAGAGGAGAT...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp GTCCTCATACATGATGGCCCTACTCATCAACTTCTTTCAGCCTTCCCTAATTCACAGACAGGAACAATATaGGTCAGAATTGTGACTGTG +
Preference number: 2 (lower is better)
Translates to: VLIHDGPTHQLLSAFPNSQTGTI*VRIVTV
Trigger: CACAGTCACAATTCTGACCCATATTGTTCCTGTCTG...TGAATTAGGGAAGGCTGAAAGAAGTTGATGAGTAGGGCCATCATGTATGAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CAA 90 bp GAGCTATCCCCAATGGATCTTCATAAGCCAGAAATGATACAGCTCTaGAGAGGCAGTGGGTTTTCTCTATGTTGGCATACTTATCATATG +
Preference number: 2 (lower is better)
Translates to: ELSPMDLHKPEMIQL*RGSGFSLCWHTYHM
Trigger: CATATGATAAGTATGCCAACATAGAGAAAACCCACTGCCTCTCAAGAGCTGTATCATTTCTGGCTTATGAAGATCCATTGGGGATAGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp ATGACCAACTTAGGTGCCCCTGTTACCAACATCTCTCTCATTCTTCTTCCTGGATTGTGTCCTTATGAATaGGACCATTTTTCACCAAAG +
Preference number: 2 (lower is better)
Translates to: MTNLGAPVTNISLILLPGLCPYE*DHFSPK
Trigger: CTTTGGTGAAAAATGGTCTCATTCATAAGGACACAA...TCCAGGAAGAAGAATGAGAGAGATGTTGGTAACAGGGGCACCTAAGTTGGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp CCTGTCCACTTTCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAGAATTGTGTCCTTATaGATGAGACCATTTTTCACC +
Preference number: 2 (lower is better)
Translates to: PVHFPSQVPTLLIVSFHIRIVSL*MRPFFT
Trigger: GGTGAAAAATGGTCTCATTCATAAGGACACAATTCT...TATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGAAAGTGGACAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CTTCTTCCTGGAGTAGTGAGCTTGAAAGCCATGACCACAGTTATTGTTTTGGCCAGAATTGTGTCCTTATaGATGAGACCATTTTTCACC +
Preference number: 2 (lower is better)
Translates to: LLPGVVSLKAMTTVIVLARIVSL*MRPFFT
Trigger: GGTGAAAAATGGTCTCATTCATAAGGACACAATTCT...GGCCAAAACAATAACTGTGGTCATGGCTTTCAAGCTCACTACTCCAGGAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp TCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAATGTGAAGAGCACTCCATGAAAGCATaGGGGATAATGGTGATTACT +
Preference number: 2 (lower is better)
Translates to: SFPGPYIAHCVFSHKCEEHSMKA*GIMVIT
Trigger: AGTAATCACCATTATCCCTCATGCTTTCATGGAGTG...CTCTTCACATTTATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp TGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTGCTGGGTCTTTTGGAGGTCACAGTATATTGAATaGAGCCAAGGCATGAAATTG +
Preference number: 2 (lower is better)
Translates to: WEQISTPDFFSCCWVFWRSQYIE*SQGMKL
Trigger: CAATTTCATGCCTTGGCTTCATTCAATATACTGTGA...CCTCCAAAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp AGTATAGTGCTTCTGTGCTGTCATAGGCAATACTGTCACTGTACTTCACACTGCTTGGTCACAGTATATTaGATGAAGCCAAGGCATGAA +
Preference number: 2 (lower is better)
Translates to: SIVLLCCHRQYCHCTSHCLVTVY*MKPRHE
Trigger: TTCATGCCTTGGCTTCATTCAATATACTGTGACCAA...GCAGTGTGAAGTACAGTGACAGTATTGCCTATGACAGCACAGAAGCACTATACT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp GTCCTCATACATGATGGCCCTACTCATCAACTTCTTTCAGCCTTCCCTAATTCATTGGTCACAGTATATTaGATGAAGCCAAGGCATGAA +
Preference number: 2 (lower is better)
Translates to: VLIHDGPTHQLLSAFPNSLVTVY*MKPRHE
Trigger: TTCATGCCTTGGCTTCATTCAATATACTGTGACCAA...TGAATTAGGGAAGGCTGAAAGAAGTTGATGAGTAGGGCCATCATGTATGAGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp ATCAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCATCTCCTCTCTCCTGTaGTTGCCTGTTTACATTCTT +
Preference number: 2 (lower is better)
Translates to: INFFQPSLIQQKVSAVSVISSLL*LPVYIL
Trigger: AAGAATGTAAACAGGCAACCACAGGAGAGAGGAGAT...GACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp TTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTGCGTCTCTGGTGCATTCTaGGGTTCCCACAATCTCCTC +
Preference number: 2 (lower is better)
Translates to: FTSMLSSELFLTTTRTTCVSGAF*GSHNLL
Trigger: GAGGAGATTGTGGGAACCCCAGAATGCACCAGAGAC...GCAAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp ATTGGTTGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTGCTGGGTCTTTCAGACAGGAACAATATaGGTCAGAATTGTGACTGTG +
Preference number: 2 (lower is better)
Translates to: IGWEQISTPDFFSCCWVFQTGTI*VRIVTV
Trigger: CACAGTCACAATTCTGACCCATATTGTTCCTGTCTG...AAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCAACCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp ACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTACTTGATGGGTTTTCTCTATGTTaGCATACTTATCATATGGAC +
Preference number: 2 (lower is better)
Translates to: TIWVRIVTVGWQPHHLLDGFSLC*HTYHMD
Trigger: GTCCATATGATAAGTATGCCAACATAGAGAAAACCC...ATCAAGTAAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp AGTATAGTGCTTCTGTGCTGTCATAGGCAATACTGTCACTGTACTTCACACTGCTATTGGCCTTCACAATaGGAGTATCCTTGTACTTCA +
Preference number: 2 (lower is better)
Translates to: SIVLLCCHRQYCHCTSHCYWPSQ*EYPCTS
Trigger: TGAAGTACAAGGATACTCCCATTGTGAAGGCCAATA...GCAGTGTGAAGTACAGTGACAGTATTGCCTATGACAGCACAGAAGCACTATACT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCTCTCATTCTTCTTCCTaGAGTAGTGAGCTTGAAAGC +
Preference number: 2 (lower is better)
Translates to: LIQQKVSAVSVHWLGANISHSSS*SSELES
Trigger: GCTTTCAAGCTCACTACTCCAGGAAGAAGAATGAGA...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp TCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAATGTGAAGAGCCTTTCTCATTCTTCTTCCTaGAGTAGTGAGCTTGAAAGC +
Preference number: 2 (lower is better)
Translates to: SQVPTLLIVSFHINVKSLSHSSS*SSELES
Trigger: GCTTTCAAGCTCACTACTCCAGGAAGAAGAATGAGA...AAGGCTCTTCACATTTATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAATTGTGTCCTTATGAATaGGACCATTTTTCACCAAAG +
Preference number: 2 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQLCPYE*DHFSPK
Trigger: CTTTGGTGAAAAATGGTCTCATTCATAAGGACACAA...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp GTCCTCATACATGATGGCCCTACTCATCAACTTCTTTCAGCCTTCCCTAATTCATTGTGTCCTTATGAATaGGACCATTTTTCACCAAAG +
Preference number: 2 (lower is better)
Translates to: VLIHDGPTHQLLSAFPNSLCPYE*DHFSPK
Trigger: CTTTGGTGAAAAATGGTCTCATTCATAAGGACACAA...TGAATTAGGGAAGGCTGAAAGAAGTTGATGAGTAGGGCCATCATGTATGAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAAAGAATTGTGTCCTTATaGATGAGACCATTTTTCACC +
Preference number: 2 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQRIVSL*MRPFFT
Trigger: GGTGAAAAATGGTCTCATTCATAAGGACACAATTCT...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp GTCCTCATACATGATGGCCCTACTCATCAACTTCTTTCAGCCTTCCCTAATTCAAGAATTGTGTCCTTATaGATGAGACCATTTTTCACC +
Preference number: 2 (lower is better)
Translates to: VLIHDGPTHQLLSAFPNSRIVSL*MRPFFT
Trigger: GGTGAAAAATGGTCTCATTCATAAGGACACAATTCT...TGAATTAGGGAAGGCTGAAAGAAGTTGATGAGTAGGGCCATCATGTATGAGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCTTGGTCACAGTATATTaGATGAAGCCAAGGCATGAA +
Preference number: 2 (lower is better)
Translates to: LIQQKVSAVSVHWLGANILVTVY*MKPRHE
Trigger: TTCATGCCTTGGCTTCATTCAATATACTGTGACCAA...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp TCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAATGTGAAGAGTTGGTCACAGTATATTaGATGAAGCCAAGGCATGAA +
Preference number: 2 (lower is better)
Translates to: SFPGPYIAHCVFSHKCEELVTVY*MKPRHE
Trigger: TTCATGCCTTGGCTTCATTCAATATACTGTGACCAA...CTCTTCACATTTATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAAGGGTTTTCTCTATGTTaGCATACTTATCATATGGAC +
Preference number: 2 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQGFSLC*HTYHMD
Trigger: GTCCATATGATAAGTATGCCAACATAGAGAAAACCC...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp TCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAATGTGAAGAGTATTGGCCTTCACAATaGGAGTATCCTTGTACTTCA +
Preference number: 2 (lower is better)
Translates to: SFPGPYIAHCVFSHKCEEYWPSQ*EYPCTS
Trigger: TGAAGTACAAGGATACTCCCATTGTGAAGGCCAATA...CTCTTCACATTTATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CCA 90 bp ACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTACTTGATATCTCTGTCAATAAATaGAGGAGATGTTATCAACCA +
Preference number: 2 (lower is better)
Translates to: TIWVRIVTVGWQPHHLLDISVNK*RRCYQP
Trigger: TGGTTGATAACATCTCCTCCATTTATTGACAGAGAT...ATCAAGTAAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCAGAATTGTGTCCTTATaGATGAGACCATTTTTCACC +
Preference number: 2 (lower is better)
Translates to: LIQQKVSAVSVHWLGANIRIVSL*MRPFFT
Trigger: GGTGAAAAATGGTCTCATTCATAAGGACACAATTCT...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR TCA 90 bp ATTGGTTGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTGCTGGGTCTTTAGAATTGTGTCCTTATaGATGAGACCATTTTTCACC +
Preference number: 2 (lower is better)
Translates to: IGWEQISTPDFFSCCWVFRIVSL*MRPFFT
Trigger: GGTGAAAAATGGTCTCATTCATAAGGACACAATTCT...AAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCAACCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR GCA 90 bp TTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTGCAGGCATGAAATTGGATaGAGCCACTCCATGAAAGCA +
Preference number: 2 (lower is better)
Translates to: FTSMLSSELFLTTTRTTCRHEIG*SHSMKA
Trigger: TGCTTTCATGGAGTGGCTGCATCCAATTTCATGCCT...GCAAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp ATTGGTTGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTGCTGGGTCTTTATCTCTGTCAATAAATaGAGGAGATGTTATCAACCA +
Preference number: 2 (lower is better)
Translates to: IGWEQISTPDFFSCCWVFISVNK*RRCYQP
Trigger: TGGTTGATAACATCTCCTCCATTTATTGACAGAGAT...AAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCAACCAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp CACAACGATCAGAAGAAGCTTGTAAGAAAAGTGTTTCTTTACTTATGTACCTTGCACTCCATGAAAGCATaGGGGATAATGGTGATTACT +
Preference number: 2 (lower is better)
Translates to: HNDQKKLVRKVFLYLCTLHSMKA*GIMVIT
Trigger: AGTAATCACCATTATCCCTCATGCTTTCATGGAGTG...CAAGGTACATAAGTAAAGAAACACTTTTCTTACAAGCTTCTTCTGATCGTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp GCTTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTTATTGGCCTTCACAATaGGAGTATCCTTGTACTTCA +
Preference number: 2 (lower is better)
Translates to: ALLPCCLQSFFLQLQEQLYWPSQ*EYPCTS
Trigger: TGAAGTACAAGGATACTCCCATTGTGAAGGCCAATA...AAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR TCA 90 bp TTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTGCTCACAGTATATTGAATaGAGCCAAGGCATGAAATTG +
Preference number: 2 (lower is better)
Translates to: FTSMLSSELFLTTTRTTCSQYIE*SQGMKL
Trigger: CAATTTCATGCCTTGGCTTCATTCAATATACTGTGA...GCAAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CCA 90 bp TTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTGCGGGTTTTCTCTATGTTaGCATACTTATCATATGGAC +
Preference number: 2 (lower is better)
Translates to: FTSMLSSELFLTTTRTTCGFSLC*HTYHMD
Trigger: GTCCATATGATAAGTATGCCAACATAGAGAAAACCC...GCAAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CAA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCTGGTCCTCCAGTCCCTaGAGGATTAGGTGCATTATC +
Preference number: 3 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTWSSSP*RIRCII
Trigger: GATAATGCACCTAATCCTCAAGGGACTGGAGGACCA...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCGTGTATGCTGCCTGTTaGGTGTTCCAGTGTTTGAGA +
Preference number: 3 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTVYAAC*VFQCLR
Trigger: TCTCAAACACTGGAACACCAAACAGGCAGCATACAC...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR TCA 72 bp ACCTCAGTAATAGTGTCAGGCCTTGGGGCCTCCCACTaGGCTGGACCCCACTTTGGACCTGTCACTGGACCT +
Preference number: 3 (lower is better)
Translates to: TSVIVSGLGASH*AGPHFGPVTGP
Trigger: AGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACTGAGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CCA 72 bp TGGGACTCTCTCACCTCCCAGGTCTCTGGTGCATTCTaGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCC +
Preference number: 3 (lower is better)
Translates to: WDSLTSQVSGAF*GSHNLLSPVVA
Trigger: GGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAGACCTGGGAGGTGAGAGAGTCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCTCCTCTCTCCTGTGGTaGCCTGTTTACATTCTTTCT +
Preference number: 3 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTSSLLW*PVYILS
Trigger: AGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGA...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCGTTTCTGTCCATTGGTaGGGAGCAAATATCTACACC +
Preference number: 3 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTVSVHW*GANIYT
Trigger: GGTGTAGATATTTGCTCCCAACCAATGGACAGAAAC...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTGAGGATTAGGGACCTCCAAATGCCCTaGGTCCTCCAGTCCCTTGAG +
Preference number: 3 (lower is better)
Translates to: PLHLTSKCPWSSSPLRIRDLQMP*VLQSLE
Trigger: CTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTC...CCTAATCCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCAACTACAAGAACAACTaGCCCAGAGATGGTAGTGTT +
Preference number: 3 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTNYKNN*PRDGSV
Trigger: AACACTACCATCTCTGGGCAAGTTGTTCTTGTAGTT...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGCTGTTGCTGGGTCTTTaGGAGGGCAGTCATGATGGG +
Preference number: 3 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQLLLGL*EGSHDG
Trigger: CCCATCATGACTGCCCTCCAAAAGACCCAGCAACAG...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR GCA 72 bp GGATACCTCCAACACCCACTTCACCTGACCTCCAAATaGCCTTGGTCCTCCAGTCCCTTGAGGATTAGGTGC +
Preference number: 3 (lower is better)
Translates to: GYLQHPLHLTSK*PWSSSPLRIRC
Trigger: GCACCTAATCCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp AGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCGTAGCGTTTCCGCAGTaGAGATTCCTGGTTCTCAAT +
Preference number: 3 (lower is better)
Translates to: SNSVRPWGLPLSWTPLWTVAFPQ*RFLVLN
Trigger: ATTGAGAACCAGGAATCTCAACTGCGGAAACGCTAC...GGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTCTGTTGCTGGGTCTTTaGGAGGGCAGTCATGATGGG +
Preference number: 3 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFLLLGL*EGSHDG
Trigger: CCCATCATGACTGCCCTCCAAAAGACCCAGCAACAG...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CCA 72 bp CTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTaGACCTTCCTTTCCTCAGGCACATCTCCATTTCTA +
Preference number: 3 (lower is better)
Translates to: LPLSWTPLWTCH*TFLSSGTSPFL
Trigger: TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CCA 72 bp TTTCATGCCTTCACGCTACCTCACCCCGTCTCCATGTaGATACCTCCAACACCCACTTCACCTGACCTCCAA +
Preference number: 3 (lower is better)
Translates to: FHAFTLPHPVSM*IPPTPTSPDLQ
Trigger: TTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCACATGGAGACGGGGTGAGGTAGCGTGAAGGCATGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CTCAGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGTCCTCTCTCCTGTGGTaGCCTGTTTACATTCTTTCT +
Preference number: 3 (lower is better)
Translates to: LSNSVRPWGLPLSWTPLWSSLLW*PVYILS
Trigger: AGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGA...CCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp GTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGCTAAGGTCCCTTCCTTaGAGTCCTGGGACTCTCTCA +
Preference number: 3 (lower is better)
Translates to: VLYCMCVGGLISAGVCCLLRSLP*SPGTLS
Trigger: TGAGAGAGTCCCAGGACTCAAAGGAAGGGACCTTAG...CAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTAGAGCTGGACCCCACTTaGGACCTGTCACTGGACCTT +
Preference number: 3 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLELDPT*DLSLDL
Trigger: AAGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTC...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp GACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTGAGCTGGACCCCACTTaGGACCTGTCACTGGACCTT +
Preference number: 3 (lower is better)
Translates to: DRNNMGQNCDCGVATPSLELDPT*DLSLDL
Trigger: AAGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTC...AAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CCTCACCCCGTCTCCATGTGGATACCTCCAACACCCACTTCACCTGACCTCCAAGTGTATGCTGCCTGTTaGGTGTTCCAGTGTTTGAGA +
Preference number: 3 (lower is better)
Translates to: PHPVSMWIPPTPTSPDLQVYAAC*VFQCLR
Trigger: TCTCAAACACTGGAACACCAAACAGGCAGCATACAC...TTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCACATGGAGACGGGGTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CCA 72 bp GTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTaGTTGCCTGTTTACATTCTTTCTGCTGGCCCTCAG +
Preference number: 3 (lower is better)
Translates to: VHSGVPTISSLL*LPVYILSAGPQ
Trigger: CTGAGGGCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CCA 72 bp CTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTaGTCCTCCAGTCCCTTGAGGATTAGGTGCATTATC +
Preference number: 3 (lower is better)
Translates to: LQHPLHLTSKCP*SSSPLRIRCII
Trigger: GATAATGCACCTAATCCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CCA 72 bp ACTCCAAATGTGGTCTGCTGCAAGACGCAGGAGACCTaGTTTGGATGTCCAATGAAGAGCAGGGAGCAGAGA +
Preference number: 3 (lower is better)
Translates to: TPNVVCCKTQET*FGCPMKSREQR
Trigger: TCTCTGCTCCCTGCTCTTCATTGGACATCCAAACCAGGTCTCCTGCGTCTTGCAGCAGACCACATTTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CAA 90 bp CCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTGAGGATTAGGGTAGCGTTTCCGCAGTaGAGATTCCTGGTTCTCAAT +
Preference number: 3 (lower is better)
Translates to: PLHLTSKCPWSSSPLRIRVAFPQ*RFLVLN
Trigger: ATTGAGAACCAGGAATCTCAACTGCGGAAACGCTAC...CCTAATCCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCAACTACAAGAACAACTaGCCCAGAGATGGTAGTGTT +
Preference number: 3 (lower is better)
Translates to: PLSWTPLWTCHWTFLSSGNYKNN*PRDGSV
Trigger: AACACTACCATCTCTGGGCAAGTTGTTCTTGTAGTT...GCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CTCAGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGAACTACAAGAACAACTaGCCCAGAGATGGTAGTGTT +
Preference number: 3 (lower is better)
Translates to: LSNSVRPWGLPLSWTPLWNYKNN*PRDGSV
Trigger: AACACTACCATCTCTGGGCAAGTTGTTCTTGTAGTT...CCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp TCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTCTAAGGTCCCTTCCTTaGAGTCCTGGGACTCTCTCA +
Preference number: 3 (lower is better)
Translates to: SSTVCVLGASYQLVYAACLRSLP*SPGTLS
Trigger: TGAGAGAGTCCCAGGACTCAAAGGAAGGGACCTTAG...ACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp TGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTCTGTTGCTGGGTCTTTaGGAGGGCAGTCATGATGGG +
Preference number: 3 (lower is better)
Translates to: WKSSTVCVLGASYQLVYALLLGL*EGSHDG
Trigger: CCCATCATGACTGCCCTCCAAAAGACCCAGCAACAG...AGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTCTGTTGCTGGGTCTTTaGGAGGGCAGTCATGATGGG +
Preference number: 3 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGLLLGL*EGSHDG
Trigger: CCCATCATGACTGCCCTCCAAAAGACCCAGCAACAG...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTGTTTCTGTCCATTGGTaGGGAGCAAATATCTACACC +
Preference number: 3 (lower is better)
Translates to: PPTPTSPDLQMPLVLQSLVSVHW*GANIYT
Trigger: GGTGTAGATATTTGCTCCCAACCAATGGACAGAAAC...AAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGGTGTATGCTGCCTGTTaGGTGTTCCAGTGTTTGAGA +
Preference number: 3 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQVYAAC*VFQCLR
Trigger: TCTCAAACACTGGAACACCAAACAGGCAGCATACAC...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CACCCCCATACACCCTCTGACTGCTCCATATTTCATGCCTTCACGCTACCTCACGTAGCGTTTCCGCAGTaGAGATTCCTGGTTCTCAAT +
Preference number: 3 (lower is better)
Translates to: HPHTPSDCSIFHAFTLPHVAFPQ*RFLVLN
Trigger: ATTGAGAACCAGGAATCTCAACTGCGGAAACGCTAC...GTGAGGTAGCGTGAAGGCATGAAATATGGAGCAGTCAGAGGGTGTATGGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp TCAGACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTAAGGTCCCTTCCTTaGAGTCCTGGGACTCTCTCA +
Preference number: 3 (lower is better)
Translates to: SDRNNMGQNCDCGVATPSLRSLP*SPGTLS
Trigger: TGAGAGAGTCCCAGGACTCAAAGGAAGGGACCTTAG...TGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCCTAAGGTCCCTTCCTTaGAGTCCTGGGACTCTCTCA +
Preference number: 3 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPLRSLP*SPGTLS
Trigger: TGAGAGAGTCCCAGGACTCAAAGGAAGGGACCTTAG...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp ACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTACTTGATGAGCTGGACCCCACTTaGGACCTGTCACTGGACCTT +
Preference number: 3 (lower is better)
Translates to: TIWVRIVTVGWQPHHLLDELDPT*DLSLDL
Trigger: AAGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTC...ATCAAGTAAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGGTTTCTGTCCATTGGTaGGGAGCAAATATCTACACC +
Preference number: 3 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQVSVHW*GANIYT
Trigger: GGTGTAGATATTTGCTCCCAACCAATGGACAGAAAC...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTGAGGATTAGGTATTACCTGAGACTGTaGGTCCTCATACATGATGGC +
Preference number: 3 (lower is better)
Translates to: PLHLTSKCPWSSSPLRIRYYLRL*VLIHDG
Trigger: GCCATCATGTATGAGGACCAACAGTCTCAGGTAATA...CCTAATCCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CACCCCCATACACCCTCTGACTGCTCCATATTTCATGCCTTCACGCTACCTCACGTGTATGCTGCCTGTTaGGTGTTCCAGTGTTTGAGA +
Preference number: 3 (lower is better)
Translates to: HPHTPSDCSIFHAFTLPHVYAAC*VFQCLR
Trigger: TCTCAAACACTGGAACACCAAACAGGCAGCATACAC...GTGAGGTAGCGTGAAGGCATGAAATATGGAGCAGTCAGAGGGTGTATGGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp ACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTACTTGATGACCTCCAAATGCCCTaGGTCCTCCAGTCCCTTGAG +
Preference number: 3 (lower is better)
Translates to: TIWVRIVTVGWQPHHLLDDLQMP*VLQSLE
Trigger: CTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTC...ATCAAGTAAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR GCA 72 bp ATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTaGCTGTTTACATTCTTTCTGCTGGCCCTCAGAGCT +
Preference number: 3 (lower is better)
Translates to: ILGFPQSPLSCG*LFTFFLLALRA
Trigger: AGCTCTGAGGGCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR GCA 72 bp TGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTaGTGGGTCTTTTGGAGGGCAGTCATGATGGGCCCC +
Preference number: 3 (lower is better)
Translates to: WEQISTPDFFSC*WVFWRAVMMGP
Trigger: GGGGCCCATCATGACTGCCCTCCAAAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CCA 72 bp CTCTCTCCTGTGGTTGCCTGTTTACATTCTTTCTGCTaGCCCTCAGAGCTTCAGTCCTTTCCCTCAGCCAAT +
Preference number: 3 (lower is better)
Translates to: LSPVVACLHSFC*PSELQSFPSAN
Trigger: ATTGGCTGAGGGAAAGGACTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CCA 72 bp AAATGTGGTCTGCTGCAAGACGCAGGAGACCTGGTTTaGATGTCCAATGAAGAGCAGGGAGCAGAGAAAGCA +
Preference number: 3 (lower is better)
Translates to: KCGLLQDAGDLV*MSNEEQGAEKA
Trigger: TGCTTTCTCTGCTCCCTGCTCTTCATTGGACATCCAAACCAGGTCTCCTGCGTCTTGCAGCAGACCACATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CAA 90 bp CACCCCCATACACCCTCTGACTGCTCCATATTTCATGCCTTCACGCTACCTCACTCCTCTCTCCTGTGGTaGCCTGTTTACATTCTTTCT +
Preference number: 3 (lower is better)
Translates to: HPHTPSDCSIFHAFTLPHSSLLW*PVYILS
Trigger: AGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGA...GTGAGGTAGCGTGAAGGCATGAAATATGGAGCAGTCAGAGGGTGTATGGGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAAGAGCTGGACCCCACTTaGGACCTGTCACTGGACCTT +
Preference number: 3 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQELDPT*DLSLDL
Trigger: AAGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTC...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp AGTATAGTGCTTCTGTGCTGTCATAGGCAATACTGTCACTGTACTTCACACTGCGAGCTGGACCCCACTTaGGACCTGTCACTGGACCTT +
Preference number: 3 (lower is better)
Translates to: SIVLLCCHRQYCHCTSHCELDPT*DLSLDL
Trigger: AAGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTC...GCAGTGTGAAGTACAGTGACAGTATTGCCTATGACAGCACAGAAGCACTATACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp ACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTACTTGATCTGTTGCTGGGTCTTTaGGAGGGCAGTCATGATGGG +
Preference number: 3 (lower is better)
Translates to: TIWVRIVTVGWQPHHLLDLLLGL*EGSHDG
Trigger: CCCATCATGACTGCCCTCCAAAAGACCCAGCAACAG...ATCAAGTAAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATGGTCCTCCAGTCCCTaGAGGATTAGGTGCATTATC +
Preference number: 3 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLWSSSP*RIRCII
Trigger: GATAATGCACCTAATCCTCAAGGGACTGGAGGACCA...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp GACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTTGGTCCTCCAGTCCCTaGAGGATTAGGTGCATTATC +
Preference number: 3 (lower is better)
Translates to: DRNNMGQNCDCGVATPSLWSSSP*RIRCII
Trigger: GATAATGCACCTAATCCTCAAGGGACTGGAGGACCA...AAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCTGGTCCTCCAGTCCCTaGAGGATTAGGTGCATTATC +
Preference number: 3 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPWSSSP*RIRCII
Trigger: GATAATGCACCTAATCCTCAAGGGACTGGAGGACCA...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCAGACCTCCAAATGCCCTaGGTCCTCCAGTCCCTTGAG +
Preference number: 3 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPDLQMP*VLQSLE
Trigger: CTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTC...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR GCA 72 bp ATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTaGCTGTTTGGTGTTCCAGTGTTTGAGAGATCTCAG +
Preference number: 3 (lower is better)
Translates to: MCVGGLISAGVC*LFGVPVFERSQ
Trigger: CTGAGATCTCTCAAACACTGGAACACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR GCA 72 bp ATATTCCTTTCACAACACCCCCATACACCCTCTGACTaGTCCATATTTCATGCCTTCACGCTACCTCACCCC +
Preference number: 3 (lower is better)
Translates to: IFLSQHPHTPSD*SIFHAFTLPHP
Trigger: GGGGTGAGGTAGCGTGAAGGCATGAAATATGGAGCAGTCAGAGGGTGTATGGGGGTGTTGTGAAAGGAATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTAACTACAAGAACAACTaGCCCAGAGATGGTAGTGTT +
Preference number: 3 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFNYKNN*PRDGSV
Trigger: AACACTACCATCTCTGGGCAAGTTGTTCTTGTAGTT...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCGAGCTGGACCCCACTTaGGACCTGTCACTGGACCTT +
Preference number: 3 (lower is better)
Translates to: LIQQKVSAVSVHWLGANIELDPT*DLSLDL
Trigger: AAGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTC...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAACTGTTGCTGGGTCTTTaGGAGGGCAGTCATGATGGG +
Preference number: 3 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQLLLGL*EGSHDG
Trigger: CCCATCATGACTGCCCTCCAAAAGACCCAGCAACAG...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp AGTATAGTGCTTCTGTGCTGTCATAGGCAATACTGTCACTGTACTTCACACTGCCTGTTGCTGGGTCTTTaGGAGGGCAGTCATGATGGG +
Preference number: 3 (lower is better)
Translates to: SIVLLCCHRQYCHCTSHCLLLGL*EGSHDG
Trigger: CCCATCATGACTGCCCTCCAAAAGACCCAGCAACAG...GCAGTGTGAAGTACAGTGACAGTATTGCCTATGACAGCACAGAAGCACTATACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp TCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTGTTTCTGTCCATTGGTaGGGAGCAAATATCTACACC +
Preference number: 3 (lower is better)
Translates to: SSTVCVLGASYQLVYAACVSVHW*GANIYT
Trigger: GGTGTAGATATTTGCTCCCAACCAATGGACAGAAAC...ACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp TCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTATTACCTGAGACTGTaGGTCCTCATACATGATGGC +
Preference number: 3 (lower is better)
Translates to: SSTVCVLGASYQLVYAACYYLRL*VLIHDG
Trigger: GCCATCATGTATGAGGACCAACAGTCTCAGGTAATA...ACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCGTGTATGCTGCCTGTTaGGTGTTCCAGTGTTTGAGA +
Preference number: 3 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPVYAAC*VFQCLR
Trigger: TCTCAAACACTGGAACACCAAACAGGCAGCATACAC...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CCA 72 bp ACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTaGCAACCCCATCACTTACTTGATGCCCTATCTTCC +
Preference number: 3 (lower is better)
Translates to: TGTIWVRIVTVG*QPHHLLDALSS
Trigger: GGAAGATAGGGCATCAAGTAAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp GACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTTCCTCTCTCCTGTGGTaGCCTGTTTACATTCTTTCT +
Preference number: 3 (lower is better)
Translates to: DRNNMGQNCDCGVATPSLSSLLW*PVYILS
Trigger: AGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGA...AAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCACTAAGGTCCCTTCCTTaGAGTCCTGGGACTCTCTCA +
Preference number: 3 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPLRSLP*SPGTLS
Trigger: TGAGAGAGTCCCAGGACTCAAAGGAAGGGACCTTAG...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCCTGTTGCTGGGTCTTTaGGAGGGCAGTCATGATGGG +
Preference number: 3 (lower is better)
Translates to: LIQQKVSAVSVHWLGANILLLGL*EGSHDG
Trigger: CCCATCATGACTGCCCTCCAAAAGACCCAGCAACAG...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp GACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTGTTTCTGTCCATTGGTaGGGAGCAAATATCTACACC +
Preference number: 3 (lower is better)
Translates to: DRNNMGQNCDCGVATPSLVSVHW*GANIYT
Trigger: GGTGTAGATATTTGCTCCCAACCAATGGACAGAAAC...AAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp TGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGTTTCTGTCCATTGGTaGGGAGCAAATATCTACACC +
Preference number: 3 (lower is better)
Translates to: WKSSTVCVLGASYQLVYAVSVHW*GANIYT
Trigger: GGTGTAGATATTTGCTCCCAACCAATGGACAGAAAC...AGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTTATTACCTGAGACTGTaGGTCCTCATACATGATGGC +
Preference number: 3 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGYYLRL*VLIHDG
Trigger: GCCATCATGTATGAGGACCAACAGTCTCAGGTAATA...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp GACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTTATTACCTGAGACTGTaGGTCCTCATACATGATGGC +
Preference number: 3 (lower is better)
Translates to: DRNNMGQNCDCGVATPSLYYLRL*VLIHDG
Trigger: GCCATCATGTATGAGGACCAACAGTCTCAGGTAATA...AAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTAAACTACAAGAACAACTaGCCCAGAGATGGTAGTGTT +
Preference number: 3 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLNYKNN*PRDGSV
Trigger: AACACTACCATCTCTGGGCAAGTTGTTCTTGTAGTT...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTAACTACAAGAACAACTaGCCCAGAGATGGTAGTGTT +
Preference number: 3 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGNYKNN*PRDGSV
Trigger: AACACTACCATCTCTGGGCAAGTTGTTCTTGTAGTT...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp GTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCAACTACAAGAACAACTaGCCCAGAGATGGTAGTGTT +
Preference number: 3 (lower is better)
Translates to: VPTISSLLWLPVYILSAGNYKNN*PRDGSV
Trigger: AACACTACCATCTCTGGGCAAGTTGTTCTTGTAGTT...GCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp TGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTAACTACAAGAACAACTaGCCCAGAGATGGTAGTGTT +
Preference number: 3 (lower is better)
Translates to: WKSSTVCVLGASYQLVYANYKNN*PRDGSV
Trigger: AACACTACCATCTCTGGGCAAGTTGTTCTTGTAGTT...AGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp ATCAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCTAAGGTCCCTTCCTTaGAGTCCTGGGACTCTCTCA +
Preference number: 3 (lower is better)
Translates to: INFFQPSLIQQKVSAVSVLRSLP*SPGTLS
Trigger: TGAGAGAGTCCCAGGACTCAAAGGAAGGGACCTTAG...GACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCCTAAGGTCCCTTCCTTaGAGTCCTGGGACTCTCTCA +
Preference number: 3 (lower is better)
Translates to: LIQQKVSAVSVHWLGANILRSLP*SPGTLS
Trigger: TGAGAGAGTCCCAGGACTCAAAGGAAGGGACCTTAG...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTCTTCCCATGCTCAGATaGTATATCTCTGTCAATAAA +
Preference number: 3 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFLPMLR*YISVNK
Trigger: TTTATTGACAGAGATATACAATCTGAGCATGGGAAG...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR TCA 72 bp GTTTCTGTCCATTGGTTGGGAGCAAATATCTACACCTaGCTTTTTCAGCTGTTGCTGGGTCTTTTGGAGGGC +
Preference number: 3 (lower is better)
Translates to: VSVHWLGANIYT*LFQLLLGLLEG
Trigger: GCCCTCCAAAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCAACCAATGGACAGAAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR TCA 72 bp TCCAGTCCCTTGAGGATTAGGTGCATTATCTCTGACTaGACACAGACCTGGAAGTCCTCTACTGTATGTGTG +
Preference number: 3 (lower is better)
Translates to: SSPLRIRCIISD*TQTWKSSTVCV
Trigger: CACACATACAGTAGAGGACTTCCAGGTCTGTGTTCAGTCAGAGATAATGCACCTAATCCTCAAGGGACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR GCA 72 bp ACAGACACAGTGAAAAATACTCCAAATGTGGTCTGCTaGAAGACGCAGGAGACCTGGTTTGGATGTCCAATG +
Preference number: 3 (lower is better)
Translates to: TDTVKNTPNVVC*KTQETWFGCPM
Trigger: CATTGGACATCCAAACCAGGTCTCCTGCGTCTTGCAGCAGACCACATTTGGAGTATTTTTCACTGTGTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CAA 90 bp AGTATAGTGCTTCTGTGCTGTCATAGGCAATACTGTCACTGTACTTCACACTGCGTAGCGTTTCCGCAGTaGAGATTCCTGGTTCTCAAT +
Preference number: 3 (lower is better)
Translates to: SIVLLCCHRQYCHCTSHCVAFPQ*RFLVLN
Trigger: ATTGAGAACCAGGAATCTCAACTGCGGAAACGCTAC...GCAGTGTGAAGTACAGTGACAGTATTGCCTATGACAGCACAGAAGCACTATACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp ACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTACTTGATTCCTCTCTCCTGTGGTaGCCTGTTTACATTCTTTCT +
Preference number: 3 (lower is better)
Translates to: TIWVRIVTVGWQPHHLLDSSLLW*PVYILS
Trigger: AGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGA...ATCAAGTAAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp ACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTACTTGATTATTACCTGAGACTGTaGGTCCTCATACATGATGGC +
Preference number: 3 (lower is better)
Translates to: TIWVRIVTVGWQPHHLLDYYLRL*VLIHDG
Trigger: GCCATCATGTATGAGGACCAACAGTCTCAGGTAATA...ATCAAGTAAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp TCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTGGGTTTTCTCTATGTaGGCATACTTATCATATGGA +
Preference number: 3 (lower is better)
Translates to: SSTVCVLGASYQLVYAACWVFSM*AYLSYG
Trigger: TCCATATGATAAGTATGCCAACATAGAGAAAACCCA...ACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR TCA 72 bp ACTTCTTTCAGACAGGAACAATATGGGTCAGAATTGTaGCTGTGGGGTGGCAACCCCATCACTTACTTGATG +
Preference number: 3 (lower is better)
Translates to: TSFRQEQYGSEL*LWGGNPITYLM
Trigger: CATCAAGTAAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTCTGAAAGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAATCCTCTCTCCTGTGGTaGCCTGTTTACATTCTTTCT +
Preference number: 3 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQSSLLW*PVYILS
Trigger: AGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGA...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATCCTCTCTCCTGTGGTaGCCTGTTTACATTCTTTCT +
Preference number: 3 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPSSLLW*PVYILS
Trigger: AGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGA...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp GTCCTCATACATGATGGCCCTACTCATCAACTTCTTTCAGCCTTCCCTAATTCATATTACCTGAGACTGTaGGTCCTCATACATGATGGC +
Preference number: 3 (lower is better)
Translates to: VLIHDGPTHQLLSAFPNSYYLRL*VLIHDG
Trigger: GCCATCATGTATGAGGACCAACAGTCTCAGGTAATA...TGAATTAGGGAAGGCTGAAAGAAGTTGATGAGTAGGGCCATCATGTATGAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCCCTCAGAGCTTCAGTCCTTTCTTCCCATGCTCAGATaGTATATCTCTGTCAATAAA +
Preference number: 3 (lower is better)
Translates to: PVVACLHSFCWPSELQSFLPMLR*YISVNK
Trigger: TTTATTGACAGAGATATACAATCTGAGCATGGGAAG...AAAGGACTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACAGGCAACCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR TCA 72 bp AGGCATGAAATTGGATGCAGCCACTCCATGAAAGCATaGGGGATAATGGTGATTACTGGCTTTACTTCCATG +
Preference number: 3 (lower is better)
Translates to: RHEIGCSHSMKA*GIMVITGFTSM
Trigger: CATGGAAGTAAAGCCAGTAATCACCATTATCCCTCATGCTTTCATGGAGTGGCTGCATCCAATTTCATGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp AGTATAGTGCTTCTGTGCTGTCATAGGCAATACTGTCACTGTACTTCACACTGCAACTACAAGAACAACTaGCCCAGAGATGGTAGTGTT +
Preference number: 3 (lower is better)
Translates to: SIVLLCCHRQYCHCTSHCNYKNN*PRDGSV
Trigger: AACACTACCATCTCTGGGCAAGTTGTTCTTGTAGTT...GCAGTGTGAAGTACAGTGACAGTATTGCCTATGACAGCACAGAAGCACTATACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCGTTTCTGTCCATTGGTaGGGAGCAAATATCTACACC +
Preference number: 3 (lower is better)
Translates to: LIQQKVSAVSVHWLGANIVSVHW*GANIYT
Trigger: GGTGTAGATATTTGCTCCCAACCAATGGACAGAAAC...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CCA 72 bp TTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTaGGAGCAAATATCTACACCTGACTTTTTCAGCTGT +
Preference number: 3 (lower is better)
Translates to: FSKRCQLFLSIG*EQISTPDFFSC
Trigger: ACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCAACTACAAGAACAACTaGCCCAGAGATGGTAGTGTT +
Preference number: 3 (lower is better)
Translates to: LIQQKVSAVSVHWLGANINYKNN*PRDGSV
Trigger: AACACTACCATCTCTGGGCAAGTTGTTCTTGTAGTT...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp CTTCTTCCTGGAGTAGTGAGCTTGAAAGCCATGACCACAGTTATTGTTTTGGCCTGGGTTTTCTCTATGTaGGCATACTTATCATATGGA +
Preference number: 3 (lower is better)
Translates to: LLPGVVSLKAMTTVIVLAWVFSM*AYLSYG
Trigger: TCCATATGATAAGTATGCCAACATAGAGAAAACCCA...GGCCAAAACAATAACTGTGGTCATGGCTTTCAAGCTCACTACTCCAGGAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR GCA 72 bp TCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTaGCCAGAGATGGTAGTGTTCACAGTCAGTATGGTC +
Preference number: 3 (lower is better)
Translates to: SSELFLTTTRTT*PEMVVFTVSMV
Trigger: GACCATACTGACTGTGAACACTACCATCTCTGGGCAAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAACTTCCCATGCTCAGATaGTATATCTCTGTCAATAAA +
Preference number: 3 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQLPMLR*YISVNK
Trigger: TTTATTGACAGAGATATACAATCTGAGCATGGGAAG...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CAA 90 bp AGTATAGTGCTTCTGTGCTGTCATAGGCAATACTGTCACTGTACTTCACACTGCCTTCCCATGCTCAGATaGTATATCTCTGTCAATAAA +
Preference number: 3 (lower is better)
Translates to: SIVLLCCHRQYCHCTSHCLPMLR*YISVNK
Trigger: TTTATTGACAGAGATATACAATCTGAGCATGGGAAG...GCAGTGTGAAGTACAGTGACAGTATTGCCTATGACAGCACAGAAGCACTATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CAA 90 bp GCTTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTGTAGCGTTTCCGCAGTaGAGATTCCTGGTTCTCAAT +
Preference number: 3 (lower is better)
Translates to: ALLPCCLQSFFLQLQEQLVAFPQ*RFLVLN
Trigger: ATTGAGAACCAGGAATCTCAACTGCGGAAACGCTAC...AAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp ATCAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCTGGGTTTTCTCTATGTaGGCATACTTATCATATGGA +
Preference number: 3 (lower is better)
Translates to: INFFQPSLIQQKVSAVSVWVFSM*AYLSYG
Trigger: TCCATATGATAAGTATGCCAACATAGAGAAAACCCA...GACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR-3UTR CAA 90 bp ATTGGTTGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTGCTGGGTCTTTTGGGTTTTCTCTATGTaGGCATACTTATCATATGGA +
Preference number: 3 (lower is better)
Translates to: IGWEQISTPDFFSCCWVFWVFSM*AYLSYG
Trigger: TCCATATGATAAGTATGCCAACATAGAGAAAACCCA...AAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCAACCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR TCA 72 bp TTCTTTACTTATGTACCTTGGTCACAGTATATTGAATaGAGCCAAGGCATGAAATTGGATGCAGCCACTCCA +
Preference number: 3 (lower is better)
Translates to: FFTYVPWSQYIE*SQGMKLDAATP
Trigger: TGGAGTGGCTGCATCCAATTTCATGCCTTGGCTTCATTCAATATACTGTGACCAAGGTACATAAGTAAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CCA 72 bp CTTCCCATGCTCAGATTGTATATCTCTGTCAATAAATaGAGGAGATGTTATCAACCAGATTCCACAGAGAAC +
Preference number: 3 (lower is better)
Translates to: LPMLRLYISVNK*RRCYQPDSTEN
Trigger: GTTCTCTGTGGAATCTGGTTGATAACATCTCCTCCATTTATTGACAGAGATATACAATCTGAGCATGGGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
3UTR GCA 72 bp TACATTTTAAAGCTATTCCAAAGTATAGTGCTTCTGTaGTGTCATAGGCAATACTGTCACTGTACTTCACAC +
Preference number: 3 (lower is better)
Translates to: YILKLFQSIVLL*CHRQYCHCTSH
Trigger: GTGTGAAGTACAGTGACAGTATTGCCTATGACAGCACAGAAGCACTATACTTTGGAATAGCTTTAAAATGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR-3UTR CAA 90 bp GCTTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTTGGGTTTTCTCTATGTaGGCATACTTATCATATGGA +
Preference number: 3 (lower is better)
Translates to: ALLPCCLQSFFLQLQEQLWVFSM*AYLSYG
Trigger: TCCATATGATAAGTATGCCAACATAGAGAAAACCCA...AAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
CDS-3UTR GCA 90 bp AGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCACTCCAAATGTGGTCTaGTGCAAGACGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: SNSVRPWGLPLSWTPLWTTPNVV*CKTQET
Trigger: GGTCTCCTGCGTCTTGCAGCAGACCACATTTGGAGT...GGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCAAGGAGACAATGCCATaGGACAAATGTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTKETMP*DKCVSL
Trigger: CAAGGACACACATTTGTCCCATGGCATTGTCTCCTT...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CACCCCCATACACCCTCTGACTGCTCCATATTTCATGCCTTCACGCTACCTCACCCTCCACAACCACCATaGCCTTCCCCCTGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: HPHTPSDCSIFHAFTLPHPPQPP*PSPWCY
Trigger: ATAGCACCAGGGGGAAGGTCATGGTGGTTGTGGAGG...GTGAGGTAGCGTGAAGGCATGAAATATGGAGCAGTCAGAGGGTGTATGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CTCAGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGGCAGGAGACCTGGTTTaGATGTCCAATGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: LSNSVRPWGLPLSWTPLWAGDLV*MSNEEQ
Trigger: CTGCTCTTCATTGGACATCCAAACCAGGTCTCCTGC...CCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp AGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCACCCTTGTCATCATCTaGGATGACCAGTCCTATCCA +
Preference number: 4 (lower is better)
Translates to: SNSVRPWGLPLSWTPLWTTLVII*DDQSYP
Trigger: TGGATAGGACTGGTCATCTCAGATGATGACAAGGGT...GGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCCCACAGAGAACAAATTaGATTAGGGTACAAATGGGA +
Preference number: 4 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTPQRTN*IRVQMG
Trigger: TCCCATTTGTACCCTAATCCAATTTGTTCTCTGTGG...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp AGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTATCCCAGGACAACATaGAAGGCAATGACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: SNSVRPWGLPLSWTPLWTYPRTT*KAMTEP
Trigger: AGGCTCTGTCATTGCCTTCCATGTTGTCCTGGGATA...GGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCCCTCAGAGCTTCAGTCCTTTCCTCCACAACCACCATaGCCTTCCCCCTGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: PVVACLHSFCWPSELQSFPPQPP*PSPWCY
Trigger: ATAGCACCAGGGGGAAGGTCATGGTGGTTGTGGAGG...AAAGGACTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACAGGCAACCACAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp GTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCCCTCCACAACCACCATaGCCTTCCCCCTGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: VPTISSLLWLPVYILSAGPPQPP*PSPWCY
Trigger: ATAGCACCAGGGGGAAGGTCATGGTGGTTGTGGAGG...GCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp GCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCCCTCCACAACCACCATaGCCTTCCCCCTGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: AFPNSAKGVSCFCPLVGSPPQPP*PSPWCY
Trigger: ATAGCACCAGGGGGAAGGTCATGGTGGTTGTGGAGG...GCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCGAGGAGGGAACCTGCTaGCAAACAGTGAAAAATCTT +
Preference number: 4 (lower is better)
Translates to: PLSWTPLWTCHWTFLSSGEEGTC*QTVKNL
Trigger: AAGATTTTTCACTGTTTGTCAGCAGGTTCCCTCCTC...GCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232951.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCGGGTTTTCTCTATGTTaGCATACTTATCATATGGAC +
Preference number: 4 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTGFSLC*HTYHMD
Trigger: GTCCATATGATAAGTATGCCAACATAGAGAAAACCC...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CAA 72 bp CATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTaGCCTGTTTACATTCTTTCTGCTGGCCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: HSGVPTISSLLW*PVYILSAGPQS
Trigger: GCTCTGAGGGCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CAA 72 bp CCCTACTGTCAGGTATTTCATCTAAGGTCCCTTCCTTaGAGTCCTGGGACTCTCTCACCTCCCAGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: PYCQVFHLRSLP*SPGTLSPPRSL
Trigger: CAGAGACCTGGGAGGTGAGAGAGTCCCAGGACTCAAAGGAAGGGACCTTAGATGAAATACCTGACAGTAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGACCCTTGTCATCATCTaGGATGACCAGTCCTATCCA +
Preference number: 4 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQTLVII*DDQSYP
Trigger: TGGATAGGACTGGTCATCTCAGATGATGACAAGGGT...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CTCAGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGTTAGTACTAGAATTGTaGTGGCTGAGAAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LSNSVRPWGLPLSWTPLWLVLEL*WLRRTV
Trigger: CACTGTCCTTCTCAGCCATCACAATTCTAGTACTAA...CCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CCTCACCCCGTCTCCATGTGGATACCTCCAACACCCACTTCACCTGACCTCCAAACTAGAAGCCAAGATTaGGAAAACCTCCACAACCAC +
Preference number: 4 (lower is better)
Translates to: PHPVSMWIPPTPTSPDLQTRSQD*ENLHNH
Trigger: GTGGTTGTGGAGGTTTTCTCAATCTTGGCTTCTAGT...TTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCACATGGAGACGGGGTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp TCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTACTCCAAATGTGGTCTaGTGCAAGACGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: SSTVCVLGASYQLVYAACTPNVV*CKTQET
Trigger: GGTCTCCTGCGTCTTGCAGCAGACCACATTTGGAGT...ACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGGCTCTTGAGAGGCAGTaGGTTTTCTCTATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQALERQ*VFSMLA
Trigger: TGCCAACATAGAGAAAACCCACTGCCTCTCAAGAGC...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTGAGGATTAGGTATCCCAGGACAACATaGAAGGCAATGACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: PLHLTSKCPWSSSPLRIRYPRTT*KAMTEP
Trigger: AGGCTCTGTCATTGCCTTCCATGTTGTCCTGGGATA...CCTAATCCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACCCTTGTCATCATCTaGGATGACCAGTCCTATCCA +
Preference number: 4 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFTLVII*DDQSYP
Trigger: TGGATAGGACTGGTCATCTCAGATGATGACAAGGGT...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTGCTGGGTCTTTTGGAGGCCTCCACAACCACCATaGCCTTCCCCCTGGTGCTAT +
Preference number: 4 (lower is better)
Translates to: WEQISTPDFFSCCWVFWRPPQPP*PSPWCY
Trigger: ATAGCACCAGGGGGAAGGTCATGGTGGTTGTGGAGG...CCTCCAAAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGACTAGAAGCCAAGATTaGGAAAACCTCCACAACCAC +
Preference number: 4 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQTRSQD*ENLHNH
Trigger: GTGGTTGTGGAGGTTTTCTCAATCTTGGCTTCTAGT...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp CCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTACATCAAGGAGACAATaGCATGGGACAAATGTGTGT +
Preference number: 4 (lower is better)
Translates to: PPTPTSPDLQMPLVLQSLTSRRQ*HGTNVC
Trigger: ACACACATTTGTCCCATGGCATTGTCTCCTTGATGT...AAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp CTCAGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGAATTTTCCTGAATCCTaGAGTACATGCCACACTACA +
Preference number: 4 (lower is better)
Translates to: LSNSVRPWGLPLSWTPLWNFPES*STCHTT
Trigger: TGTAGTGTGGCATGTACTGCAGGATTCAGGAAAATT...CCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp GACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTACTCCAAATGTGGTCTaGTGCAAGACGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: DRNNMGQNCDCGVATPSLTPNVV*CKTQET
Trigger: GGTCTCCTGCGTCTTGCAGCAGACCACATTTGGAGT...AAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTAACTCCAAATGTGGTCTaGTGCAAGACGCAGGAGACC +
Preference number: 4 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLTPNVV*CKTQET
Trigger: GGTCTCCTGCGTCTTGCAGCAGACCACATTTGGAGT...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGAATGTGTGTCCTTGGTaGCTACTTGATGGACATGGT +
Preference number: 4 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQNVCPW*LLDGHG
Trigger: ACCATGTCCATCAAGTAGCCACCAAGGACACACATT...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CCTCACCCCGTCTCCATGTGGATACCTCCAACACCCACTTCACCTGACCTCCAAACAAATGTGTGTCCTTaGTGGCTACTTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: PHPVSMWIPPTPTSPDLQTNVCP*WLLDGH
Trigger: ATGTCCATCAAGTAGCCACCAAGGACACACATTTGT...TTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCACATGGAGACGGGGTGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTACAAATGTGTGTCCTTaGTGGCTACTTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: PPTPTSPDLQMPLVLQSLTNVCP*WLLDGH
Trigger: ATGTCCATCAAGTAGCCACCAAGGACACACATTTGT...AAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp GTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGGCTCTTGAGAGGCAGTaGGTTTTCTCTATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: VLYCMCVGGLISAGVCCLALERQ*VFSMLA
Trigger: TGCCAACATAGAGAAAACCCACTGCCTCTCAAGAGC...CAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp AGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCCCACAGAGAACAAATTaGATTAGGGTACAAATGGGA +
Preference number: 4 (lower is better)
Translates to: SNSVRPWGLPLSWTPLWTPQRTN*IRVQMG
Trigger: TCCCATTTGTACCCTAATCCAATTTGTTCTCTGTGG...GGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CTCAGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGCCACAGAGAACAAATTaGATTAGGGTACAAATGGGA +
Preference number: 4 (lower is better)
Translates to: LSNSVRPWGLPLSWTPLWPQRTN*IRVQMG
Trigger: TCCCATTTGTACCCTAATCCAATTTGTTCTCTGTGG...CCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CAA 72 bp TTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTaGGTGTTCCAGTGTTTGAGAGATCTCAGGGTTCCA +
Preference number: 4 (lower is better)
Translates to: LGASYQLVYAAC*VFQCLRDLRVP
Trigger: TGGAACCCTGAGATCTCTCAAACACTGGAACACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCCAAGTCCATCTAAAATaGAACATCAAGGAGACAATG +
Preference number: 4 (lower is better)
Translates to: PLSWTPLWTCHWTFLSSGQVHLK*NIKETM
Trigger: CATTGTCTCCTTGATGTTTCATTTTAGATGGACTTG...GCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CTCAGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGCAAGTCCATCTAAAATaGAACATCAAGGAGACAATG +
Preference number: 4 (lower is better)
Translates to: LSNSVRPWGLPLSWTPLWQVHLK*NIKETM
Trigger: CATTGTCTCCTTGATGTTTCATTTTAGATGGACTTG...CCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp AGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCAAATCTGAGAGAAACTaGATACCCTTGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: SNSVRPWGLPLSWTPLWTKSERN*IPLSSS
Trigger: AGATGATGACAAGGGTATTCAGTTTCTCTCAGATTT...GGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CTCAGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGAAATCTGAGAGAAACTaGATACCCTTGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: LSNSVRPWGLPLSWTPLWKSERN*IPLSSS
Trigger: AGATGATGACAAGGGTATTCAGTTTCTCTCAGATTT...CCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp GTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCGGTTTGGATGTCCAATaGAGAGCAGGGAGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: VPTISSLLWLPVYILSAGGLDVQ*RAGSRE
Trigger: TTCTCTGCTCCCTGCTCTTCATTGGACATCCAAACC...GCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTGGTTTGGATGTCCAATaGAGAGCAGGGAGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGGLDVQ*RAGSRE
Trigger: TTCTCTGCTCCCTGCTCTTCATTGGACATCCAAACC...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp GTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCAGACAGGGAGAAAGGTaGTCCAGACACTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: VPTISSLLWLPVYILSAGRQGER*SRHCRT
Trigger: TGTTCTGCAGTGTCTGGATCACCTTTCTCCCTGTCT...GCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTAGACAGGGAGAAAGGTaGTCCAGACACTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: WKSSTVCVLGASYQLVYARQGER*SRHCRT
Trigger: TGTTCTGCAGTGTCTGGATCACCTTTCTCCCTGTCT...AGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACTAGAAGCCAAGATTaGGAAAACCTCCACAACCAC +
Preference number: 4 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFTRSQD*ENLHNH
Trigger: GTGGTTGTGGAGGTTTTCTCAATCTTGGCTTCTAGT...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CTCAGTAATAGTGTCAGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGCTGTTCCATATCTGCTaGCAAACAGTGAAAAATCTT +
Preference number: 4 (lower is better)
Translates to: LSNSVRPWGLPLSWTPLWLFHIC*QTVKNL
Trigger: AAGATTTTTCACTGTTTGTCAGCAGATATGGAACAG...CCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCTGACACTATTACTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000233766.2
CDS-3UTR GCA 90 bp TCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTGAATCCTGCAGTACATaGCACACTACACACAGAGGA +
Preference number: 4 (lower is better)
Translates to: SSTVCVLGASYQLVYAACESCST*HTTHRG
Trigger: TCCTCTGTGTGTAGTGTGGCATGTACTGCAGGATTC...ACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTAATGACCAACTTAGGTaGCCCTGTTACCAACATCTC +
Preference number: 4 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFNDQLR*PCYQHL
Trigger: GAGATGTTGGTAACAGGGGCACCTAAGTTGGTCATT...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTAATGTGTGTCCTTGGTaGCTACTTGATGGACATGGT +
Preference number: 4 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFNVCPW*LLDGHG
Trigger: ACCATGTCCATCAAGTAGCCACCAAGGACACACATT...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGACAAATGTGTGTCCTTaGTGGCTACTTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQTNVCP*WLLDGH
Trigger: ATGTCCATCAAGTAGCCACCAAGGACACACATTTGT...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTGAGGATTAGGGACAGTTTCCACCAATaGTGGAGAACATCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: PLHLTSKCPWSSSPLRIRDSFHQ*WRTSKL
Trigger: TAACTTTGATGTTCTCCATCATTGGTGGAAACTGTC...CCTAATCCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp GCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCACCCTTGTCATCATCTaGGATGACCAGTCCTATCCA +
Preference number: 4 (lower is better)
Translates to: AFPNSAKGVSCFCPLVGSTLVII*DDQSYP
Trigger: TGGATAGGACTGGTCATCTCAGATGATGACAAGGGT...GCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTAAATCTGAGAGAAACTaGATACCCTTGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: PPTPTSPDLQMPLVLQSLKSERN*IPLSSS
Trigger: AGATGATGACAAGGGTATTCAGTTTCTCTCAGATTT...AAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CACCCCCATACACCCTCTGACTGCTCCATATTTCATGCCTTCACGCTACCTCACTTAGTACTAGAATTGTaGTGGCTGAGAAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: HPHTPSDCSIFHAFTLPHLVLEL*WLRRTV
Trigger: CACTGTCCTTCTCAGCCATCACAATTCTAGTACTAA...GTGAGGTAGCGTGAAGGCATGAAATATGGAGCAGTCAGAGGGTGTATGGGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTCAACATGGAAGGCAATaGCAGAGCCTTTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFQHGRQ*QSLYCK
Trigger: TTTGCAATAAAGGCTCTGTCATTGCCTTCCATGTTG...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TCTCCCTACTGTCAGGTATTTCATCTAAGGTCCCTTCCTTTGAGTCCTGGGACTAGACAGGGAGAAAGGTaGTCCAGACACTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: SPYCQVFHLRSLPLSPGTRQGER*SRHCRT
Trigger: TGTTCTGCAGTGTCTGGATCACCTTTCTCCCTGTCT...AGTCCCAGGACTCAAAGGAAGGGACCTTAGATGAAATACCTGACAGTAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp CCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTAGTGGCATTGAAGAATaGATTGCCAGTTTTAAGGAT +
Preference number: 4 (lower is better)
Translates to: PPTPTSPDLQMPLVLQSLSGIEE*IASFKD
Trigger: ATCCTTAAAACTGGCAATGCATTCTTCAATGCCACT...AAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp CACCCCCATACACCCTCTGACTGCTCCATATTTCATGCCTTCACGCTACCTCACACATCAAGGAGACAATaGCATGGGACAAATGTGTGT +
Preference number: 4 (lower is better)
Translates to: HPHTPSDCSIFHAFTLPHTSRRQ*HGTNVC
Trigger: ACACACATTTGTCCCATGGCATTGTCTCCTTGATGT...GTGAGGTAGCGTGAAGGCATGAAATATGGAGCAGTCAGAGGGTGTATGGGGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp CCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCCCTCAGAGCTTCAGTCCTTTGAATCCTGCAGTACATaGCACACTACACACAGAGGA +
Preference number: 4 (lower is better)
Translates to: PVVACLHSFCWPSELQSFESCST*HTTHRG
Trigger: TCCTCTGTGTGTAGTGTGGCATGTACTGCAGGATTC...AAAGGACTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACAGGCAACCACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp GCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCGAATCCTGCAGTACATaGCACACTACACACAGAGGA +
Preference number: 4 (lower is better)
Translates to: AFPNSAKGVSCFCPLVGSESCST*HTTHRG
Trigger: TCCTCTGTGTGTAGTGTGGCATGTACTGCAGGATTC...GCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTAGAATCCTGCAGTACATaGCACACTACACACAGAGGA +
Preference number: 4 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLESCST*HTTHRG
Trigger: TCCTCTGTGTGTAGTGTGGCATGTACTGCAGGATTC...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTAATGTGTGTCCTTGGTaGCTACTTGATGGACATGGT +
Preference number: 4 (lower is better)
Translates to: SSTVCVLGASYQLVYAACNVCPW*LLDGHG
Trigger: ACCATGTCCATCAAGTAGCCACCAAGGACACACATT...ACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCCCTCAGAGCTTCAGTCCTTTGCTCTTGAGAGGCAGTaGGTTTTCTCTATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: PVVACLHSFCWPSELQSFALERQ*VFSMLA
Trigger: TGCCAACATAGAGAAAACCCACTGCCTCTCAAGAGC...AAAGGACTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACAGGCAACCACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TCTCCCTACTGTCAGGTATTTCATCTAAGGTCCCTTCCTTTGAGTCCTGGGACTGCAGGAGACCTGGTTTaGATGTCCAATGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: SPYCQVFHLRSLPLSPGTAGDLV*MSNEEQ
Trigger: CTGCTCTTCATTGGACATCCAAACCAGGTCTCCTGC...AGTCCCAGGACTCAAAGGAAGGGACCTTAGATGAAATACCTGACAGTAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTTCTCATTCTTCTTCCTaGAGTAGTGAGCTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFSHSSS*SSELES
Trigger: GCTTTCAAGCTCACTACTCCAGGAAGAAGAATGAGA...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CAA 72 bp CCCCACCCTGTCCACTTTCCTTCCCAGGTCCCTACATaGCTCATTGTGTCTTTTCACATAAATGTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PHPVHFPSQVPT*LIVSFHINVKS
Trigger: GCTCTTCACATTTATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGAAAGTGGACAGGGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CACCCCCATACACCCTCTGACTGCTCCATATTTCATGCCTTCACGCTACCTCACGACAGTTTCCACCAATaGTGGAGAACATCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: HPHTPSDCSIFHAFTLPHDSFHQ*WRTSKL
Trigger: TAACTTTGATGTTCTCCATCATTGGTGGAAACTGTC...GTGAGGTAGCGTGAAGGCATGAAATATGGAGCAGTCAGAGGGTGTATGGGGGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGCAAGTCCATCTAAAATaGAACATCAAGGAGACAATG +
Preference number: 4 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQQVHLK*NIKETM
Trigger: CATTGTCTCCTTGATGTTTCATTTTAGATGGACTTG...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TCTCCCTACTGTCAGGTATTTCATCTAAGGTCCCTTCCTTTGAGTCCTGGGACTACCCTTGTCATCATCTaGGATGACCAGTCCTATCCA +
Preference number: 4 (lower is better)
Translates to: SPYCQVFHLRSLPLSPGTTLVII*DDQSYP
Trigger: TGGATAGGACTGGTCATCTCAGATGATGACAAGGGT...AGTCCCAGGACTCAAAGGAAGGGACCTTAGATGAAATACCTGACAGTAGGGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTGAGGATTAGGAAATCTGAGAGAAACTaGATACCCTTGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: PLHLTSKCPWSSSPLRIRKSERN*IPLSSS
Trigger: AGATGATGACAAGGGTATTCAGTTTCTCTCAGATTT...CCTAATCCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTGTGGAAAGTTCCAAATaGGGAAAATGTCATACTCTG +
Preference number: 4 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFVESSK*GKCHTL
Trigger: CAGAGTATGACATTTTCCTCATTTGGAACTTTCCAC...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
CDS-3UTR TCA 90 bp CCTGTCCACTTTCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAGACAGGGAGAAAGGTaGTCCAGACACTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: PVHFPSQVPTLLIVSFHIRQGER*SRHCRT
Trigger: TGTTCTGCAGTGTCTGGATCACCTTTCTCCCTGTCT...TATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGAAAGTGGACAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TCAGACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCAACTAGAAGCCAAGATTaGGAAAACCTCCACAACCAC +
Preference number: 4 (lower is better)
Translates to: SDRNNMGQNCDCGVATPSTRSQD*ENLHNH
Trigger: GTGGTTGTGGAGGTTTTCTCAATCTTGGCTTCTAGT...TGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTACTAGAAGCCAAGATTaGGAAAACCTCCACAACCAC +
Preference number: 4 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGTRSQD*ENLHNH
Trigger: GTGGTTGTGGAGGTTTTCTCAATCTTGGCTTCTAGT...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp GTCTGCTGCAAGACGCAGGAGACCTGGTTTGGATGTCCAATGAAGAGCAGGGAGAGTGGCATTGAAGAATaGATTGCCAGTTTTAAGGAT +
Preference number: 4 (lower is better)
Translates to: VCCKTQETWFGCPMKSRESGIEE*IASFKD
Trigger: ATCCTTAAAACTGGCAATGCATTCTTCAATGCCACT...CTCCCTGCTCTTCATTGGACATCCAAACCAGGTCTCCTGCGTCTTGCAGCAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
CDS-3UTR GCA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCAATGACCAACTTAGGTaGCCCTGTTACCAACATCTC +
Preference number: 4 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPNDQLR*PCYQHL
Trigger: GAGATGTTGGTAACAGGGGCACCTAAGTTGGTCATT...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTAAAGGAGACAATGCCATaGGACAAATGTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLKETMP*DKCVSL
Trigger: CAAGGACACACATTTGTCCCATGGCATTGTCTCCTT...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp GTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCAAGGAGACAATGCCATaGGACAAATGTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VPTISSLLWLPVYILSAGKETMP*DKCVSL
Trigger: CAAGGACACACATTTGTCCCATGGCATTGTCTCCTT...GCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTAAGGAGACAATGCCATaGGACAAATGTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGKETMP*DKCVSL
Trigger: CAAGGACACACATTTGTCCCATGGCATTGTCTCCTT...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTATCTCTGTCAATAAATaGAGGAGATGTTATCAACCA +
Preference number: 4 (lower is better)
Translates to: PPTPTSPDLQMPLVLQSLISVNK*RRCYQP
Trigger: TGGTTGATAACATCTCCTCCATTTATTGACAGAGAT...AAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp GTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGCAAGTCCATCTAAAATaGAACATCAAGGAGACAATG +
Preference number: 4 (lower is better)
Translates to: VLYCMCVGGLISAGVCCLQVHLK*NIKETM
Trigger: CATTGTCTCCTTGATGTTTCATTTTAGATGGACTTG...CAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CACCCCCATACACCCTCTGACTGCTCCATATTTCATGCCTTCACGCTACCTCACAAATCTGAGAGAAACTaGATACCCTTGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: HPHTPSDCSIFHAFTLPHKSERN*IPLSSS
Trigger: AGATGATGACAAGGGTATTCAGTTTCTCTCAGATTT...GTGAGGTAGCGTGAAGGCATGAAATATGGAGCAGTCAGAGGGTGTATGGGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp GCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCTTAGTACTAGAATTGTaGTGGCTGAGAAGGACAGTG +
Preference number: 4 (lower is better)
Translates to: AFPNSAKGVSCFCPLVGSLVLEL*WLRRTV
Trigger: CACTGTCCTTCTCAGCCATCACAATTCTAGTACTAA...GCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCAGGTTTGGATGTCCAATaGAGAGCAGGGAGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPGLDVQ*RAGSRE
Trigger: TTCTCTGCTCCCTGCTCTTCATTGGACATCCAAACC...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp GTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCCAACATGGAAGGCAATaGCAGAGCCTTTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: VPTISSLLWLPVYILSAGQHGRQ*QSLYCK
Trigger: TTTGCAATAAAGGCTCTGTCATTGCCTTCCATGTTG...GCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAAAGACAGGGAGAAAGGTaGTCCAGACACTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQRQGER*SRHCRT
Trigger: TGTTCTGCAGTGTCTGGATCACCTTTCTCCCTGTCT...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp GTCCTCATACATGATGGCCCTACTCATCAACTTCTTTCAGCCTTCCCTAATTCAAGACAGGGAGAAAGGTaGTCCAGACACTGCAGAACA +
Preference number: 4 (lower is better)
Translates to: VLIHDGPTHQLLSAFPNSRQGER*SRHCRT
Trigger: TGTTCTGCAGTGTCTGGATCACCTTTCTCCCTGTCT...TGAATTAGGGAAGGCTGAAAGAAGTTGATGAGTAGGGCCATCATGTATGAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTTTCCATATCTGCTGCTaGCAAACAGTGAAAAATCTT +
Preference number: 4 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFFHICC*QTVKNL
Trigger: AAGATTTTTCACTGTTTGTCAGCAGCAGATATGGAA...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000163019.9
ENSMUST00000233651.2
CDS-3UTR GCA 90 bp CACCCCCATACACCCTCTGACTGCTCCATATTTCATGCCTTCACGCTACCTCACAGTGGCATTGAAGAATaGATTGCCAGTTTTAAGGAT +
Preference number: 4 (lower is better)
Translates to: HPHTPSDCSIFHAFTLPHSGIEE*IASFKD
Trigger: ATCCTTAAAACTGGCAATGCATTCTTCAATGCCACT...GTGAGGTAGCGTGAAGGCATGAAATATGGAGCAGTCAGAGGGTGTATGGGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp GCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCACATCAAGGAGACAATaGCATGGGACAAATGTGTGT +
Preference number: 4 (lower is better)
Translates to: AFPNSAKGVSCFCPLVGSTSRRQ*HGTNVC
Trigger: ACACACATTTGTCCCATGGCATTGTCTCCTTGATGT...GCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp GACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTACATCAAGGAGACAATaGCATGGGACAAATGTGTGT +
Preference number: 4 (lower is better)
Translates to: DRNNMGQNCDCGVATPSLTSRRQ*HGTNVC
Trigger: ACACACATTTGTCCCATGGCATTGTCTCCTTGATGT...AAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp TGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTACATCAAGGAGACAATaGCATGGGACAAATGTGTGT +
Preference number: 4 (lower is better)
Translates to: WKSSTVCVLGASYQLVYATSRRQ*HGTNVC
Trigger: ACACACATTTGTCCCATGGCATTGTCTCCTTGATGT...AGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TCTCCCTACTGTCAGGTATTTCATCTAAGGTCCCTTCCTTTGAGTCCTGGGACTAATGTGTGTCCTTGGTaGCTACTTGATGGACATGGT +
Preference number: 4 (lower is better)
Translates to: SPYCQVFHLRSLPLSPGTNVCPW*LLDGHG
Trigger: ACCATGTCCATCAAGTAGCCACCAAGGACACACATT...AGTCCCAGGACTCAAAGGAAGGGACCTTAGATGAAATACCTGACAGTAGGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCACAAATGTGTGTCCTTaGTGGCTACTTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPTNVCP*WLLDGH
Trigger: ATGTCCATCAAGTAGCCACCAAGGACACACATTTGT...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTAACAAATGTGTGTCCTTaGTGGCTACTTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLTNVCP*WLLDGH
Trigger: ATGTCCATCAAGTAGCCACCAAGGACACACATTTGT...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTACAAATGTGTGTCCTTaGTGGCTACTTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: WKSSTVCVLGASYQLVYATNVCP*WLLDGH
Trigger: ATGTCCATCAAGTAGCCACCAAGGACACACATTTGT...AGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TCAGACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCAACAAATGTGTGTCCTTaGTGGCTACTTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: SDRNNMGQNCDCGVATPSTNVCP*WLLDGH
Trigger: ATGTCCATCAAGTAGCCACCAAGGACACACATTTGT...TGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CACCCCCATACACCCTCTGACTGCTCCATATTTCATGCCTTCACGCTACCTCACGGGTTTTCTCTATGTTaGCATACTTATCATATGGAC +
Preference number: 4 (lower is better)
Translates to: HPHTPSDCSIFHAFTLPHGFSLC*HTYHMD
Trigger: GTCCATATGATAAGTATGCCAACATAGAGAAAACCC...GTGAGGTAGCGTGAAGGCATGAAATATGGAGCAGTCAGAGGGTGTATGGGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CCTGTCCACTTTCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAGCTCTTGAGAGGCAGTaGGTTTTCTCTATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: PVHFPSQVPTLLIVSFHIALERQ*VFSMLA
Trigger: TGCCAACATAGAGAAAACCCACTGCCTCTCAAGAGC...TATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGAAAGTGGACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAAGCAGGAGACCTGGTTTaGATGTCCAATGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQAGDLV*MSNEEQ
Trigger: CTGCTCTTCATTGGACATCCAAACCAGGTCTCCTGC...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp GACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTTCTCATTCTTCTTCCTaGAGTAGTGAGCTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: DRNNMGQNCDCGVATPSLSHSSS*SSELES
Trigger: GCTTTCAAGCTCACTACTCCAGGAAGAAGAATGAGA...AAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGATCTCTGTCAATAAATaGAGGAGATGTTATCAACCA +
Preference number: 4 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQISVNK*RRCYQP
Trigger: TGGTTGATAACATCTCCTCCATTTATTGACAGAGAT...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTAGACAGTTTCCACCAATaGTGGAGAACATCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLDSFHQ*WRTSKL
Trigger: TAACTTTGATGTTCTCCATCATTGGTGGAAACTGTC...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTCAAGTCCATCTAAAATaGAACATCAAGGAGACAATG +
Preference number: 4 (lower is better)
Translates to: SSTVCVLGASYQLVYAACQVHLK*NIKETM
Trigger: CATTGTCTCCTTGATGTTTCATTTTAGATGGACTTG...ACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCCCTCAGAGCTTCAGTCCTTTGTGGAAAGTTCCAAATaGGGAAAATGTCATACTCTG +
Preference number: 4 (lower is better)
Translates to: PVVACLHSFCWPSELQSFVESSK*GKCHTL
Trigger: CAGAGTATGACATTTTCCTCATTTGGAACTTTCCAC...AAAGGACTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACAGGCAACCACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
CDS-3UTR TCA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTGTGGAAAGTTCCAAATaGGGAAAATGTCATACTCTG +
Preference number: 4 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGVESSK*GKCHTL
Trigger: CAGAGTATGACATTTTCCTCATTTGGAACTTTCCAC...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
CDS-3UTR TCA 90 bp TCTCCCTACTGTCAGGTATTTCATCTAAGGTCCCTTCCTTTGAGTCCTGGGACTCAACATGGAAGGCAATaGCAGAGCCTTTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: SPYCQVFHLRSLPLSPGTQHGRQ*QSLYCK
Trigger: TTTGCAATAAAGGCTCTGTCATTGCCTTCCATGTTG...AGTCCCAGGACTCAAAGGAAGGGACCTTAGATGAAATACCTGACAGTAGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTGCTGGGTCTTTTGGAGGACTAGAAGCCAAGATTaGGAAAACCTCCACAACCAC +
Preference number: 4 (lower is better)
Translates to: WEQISTPDFFSCCWVFWRTRSQD*ENLHNH
Trigger: GTGGTTGTGGAGGTTTTCTCAATCTTGGCTTCTAGT...CCTCCAAAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp TCTCCCTACTGTCAGGTATTTCATCTAAGGTCCCTTCCTTTGAGTCCTGGGACTACATCAAGGAGACAATaGCATGGGACAAATGTGTGT +
Preference number: 4 (lower is better)
Translates to: SPYCQVFHLRSLPLSPGTTSRRQ*HGTNVC
Trigger: ACACACATTTGTCCCATGGCATTGTCTCCTTGATGT...AGTCCCAGGACTCAAAGGAAGGGACCTTAGATGAAATACCTGACAGTAGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCAGAATCCTGCAGTACATaGCACACTACACACAGAGGA +
Preference number: 4 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPESCST*HTTHRG
Trigger: TCCTCTGTGTGTAGTGTGGCATGTACTGCAGGATTC...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCAATTTTCCTGAATCCTaGAGTACATGCCACACTACA +
Preference number: 4 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPNFPES*STCHTT
Trigger: TGTAGTGTGGCATGTACTGCAGGATTCAGGAAAATT...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp CCTGTCCACTTTCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAATGACCAACTTAGGTaGCCCTGTTACCAACATCTC +
Preference number: 4 (lower is better)
Translates to: PVHFPSQVPTLLIVSFHINDQLR*PCYQHL
Trigger: GAGATGTTGGTAACAGGGGCACCTAAGTTGGTCATT...TATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGAAAGTGGACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CCTGTCCACTTTCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAATGTGTGTCCTTGGTaGCTACTTGATGGACATGGT +
Preference number: 4 (lower is better)
Translates to: PVHFPSQVPTLLIVSFHINVCPW*LLDGHG
Trigger: ACCATGTCCATCAAGTAGCCACCAAGGACACACATT...TATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGAAAGTGGACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TCTCCCTACTGTCAGGTATTTCATCTAAGGTCCCTTCCTTTGAGTCCTGGGACTACAAATGTGTGTCCTTaGTGGCTACTTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: SPYCQVFHLRSLPLSPGTTNVCP*WLLDGH
Trigger: ATGTCCATCAAGTAGCCACCAAGGACACACATTTGT...AGTCCCAGGACTCAAAGGAAGGGACCTTAGATGAAATACCTGACAGTAGGGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CACCCCCATACACCCTCTGACTGCTCCATATTTCATGCCTTCACGCTACCTCACAAAGTAATAGTCCCATaGAAGAGATTAAGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: HPHTPSDCSIFHAFTLPHKVIVP*KRLRVN
Trigger: ATTCACCCTTAATCTCTTCCATGGGACTATTACTTT...GTGAGGTAGCGTGAAGGCATGAAATATGGAGCAGTCAGAGGGTGTATGGGGGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TCAGACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACAAGTCCATCTAAAATaGAACATCAAGGAGACAATG +
Preference number: 4 (lower is better)
Translates to: SDRNNMGQNCDCGVATPSQVHLK*NIKETM
Trigger: CATTGTCTCCTTGATGTTTCATTTTAGATGGACTTG...TGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp GTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCCAAGTCCATCTAAAATaGAACATCAAGGAGACAATG +
Preference number: 4 (lower is better)
Translates to: VPTISSLLWLPVYILSAGQVHLK*NIKETM
Trigger: CATTGTCTCCTTGATGTTTCATTTTAGATGGACTTG...GCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp ATTGGTTGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTGCTGGGTCTTTACCCTTGTCATCATCTaGGATGACCAGTCCTATCCA +
Preference number: 4 (lower is better)
Translates to: IGWEQISTPDFFSCCWVFTLVII*DDQSYP
Trigger: TGGATAGGACTGGTCATCTCAGATGATGACAAGGGT...AAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCAACCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAATGTGAAGAGACCCTTGTCATCATCTaGGATGACCAGTCCTATCCA +
Preference number: 4 (lower is better)
Translates to: SFPGPYIAHCVFSHKCEETLVII*DDQSYP
Trigger: TGGATAGGACTGGTCATCTCAGATGATGACAAGGGT...CTCTTCACATTTATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TCAGACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCAAAATCTGAGAGAAACTaGATACCCTTGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: SDRNNMGQNCDCGVATPSKSERN*IPLSSS
Trigger: AGATGATGACAAGGGTATTCAGTTTCTCTCAGATTT...TGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp GACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTAAATCTGAGAGAAACTaGATACCCTTGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: DRNNMGQNCDCGVATPSLKSERN*IPLSSS
Trigger: AGATGATGACAAGGGTATTCAGTTTCTCTCAGATTT...AAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCTTCCATATCTGCTGCTaGCAAACAGTGAAAAATCTT +
Preference number: 4 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPFHICC*QTVKNL
Trigger: AAGATTTTTCACTGTTTGTCAGCAGCAGATATGGAA...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000163019.9
ENSMUST00000233651.2
CDS-3UTR GCA 90 bp GTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCAGTGGCATTGAAGAATaGATTGCCAGTTTTAAGGAT +
Preference number: 4 (lower is better)
Translates to: VPTISSLLWLPVYILSAGSGIEE*IASFKD
Trigger: ATCCTTAAAACTGGCAATGCATTCTTCAATGCCACT...GCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp TGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTAGTGGCATTGAAGAATaGATTGCCAGTTTTAAGGAT +
Preference number: 4 (lower is better)
Translates to: WKSSTVCVLGASYQLVYASGIEE*IASFKD
Trigger: ATCCTTAAAACTGGCAATGCATTCTTCAATGCCACT...AGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAAAATGACCAACTTAGGTaGCCCTGTTACCAACATCTC +
Preference number: 4 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQNDQLR*PCYQHL
Trigger: GAGATGTTGGTAACAGGGGCACCTAAGTTGGTCATT...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp AGTATAGTGCTTCTGTGCTGTCATAGGCAATACTGTCACTGTACTTCACACTGCAATGACCAACTTAGGTaGCCCTGTTACCAACATCTC +
Preference number: 4 (lower is better)
Translates to: SIVLLCCHRQYCHCTSHCNDQLR*PCYQHL
Trigger: GAGATGTTGGTAACAGGGGCACCTAAGTTGGTCATT...GCAGTGTGAAGTACAGTGACAGTATTGCCTATGACAGCACAGAAGCACTATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp ACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTACTTGATACAAATGTGTGTCCTTaGTGGCTACTTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: TIWVRIVTVGWQPHHLLDTNVCP*WLLDGH
Trigger: ATGTCCATCAAGTAGCCACCAAGGACACACATTTGT...ATCAAGTAAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp GTCCTCATACATGATGGCCCTACTCATCAACTTCTTTCAGCCTTCCCTAATTCAAAGGAGACAATGCCATaGGACAAATGTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: VLIHDGPTHQLLSAFPNSKETMP*DKCVSL
Trigger: CAAGGACACACATTTGTCCCATGGCATTGTCTCCTT...TGAATTAGGGAAGGCTGAAAGAAGTTGATGAGTAGGGCCATCATGTATGAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp GACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTGGGTTTTCTCTATGTTaGCATACTTATCATATGGAC +
Preference number: 4 (lower is better)
Translates to: DRNNMGQNCDCGVATPSLGFSLC*HTYHMD
Trigger: GTCCATATGATAAGTATGCCAACATAGAGAAAACCC...AAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp GCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCGGGTTTTCTCTATGTTaGCATACTTATCATATGGAC +
Preference number: 4 (lower is better)
Translates to: AFPNSAKGVSCFCPLVGSGFSLC*HTYHMD
Trigger: GTCCATATGATAAGTATGCCAACATAGAGAAAACCC...GCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCGCTCTTGAGAGGCAGTaGGTTTTCTCTATGTTGGCA +
Preference number: 4 (lower is better)
Translates to: LIQQKVSAVSVHWLGANIALERQ*VFSMLA
Trigger: TGCCAACATAGAGAAAACCCACTGCCTCTCAAGAGC...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CCTGTCCACTTTCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATATCTCATTCTTCTTCCTaGAGTAGTGAGCTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: PVHFPSQVPTLLIVSFHISHSSS*SSELES
Trigger: GCTTTCAAGCTCACTACTCCAGGAAGAAGAATGAGA...TATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGAAAGTGGACAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCTATCCCAGGACAACATaGAAGGCAATGACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LIQQKVSAVSVHWLGANIYPRTT*KAMTEP
Trigger: AGGCTCTGTCATTGCCTTCCATGTTGTCCTGGGATA...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CAA 72 bp TTGAGAGATCTCAGGGTTCCATATTACCTGAGACTGTaGGTCCTCATACATGATGGCCCTACTCATCAACTT +
Preference number: 4 (lower is better)
Translates to: LRDLRVPYYLRL*VLIHDGPTHQL
Trigger: AAGTTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAACCCTGAGATCTCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CAA 72 bp CCCAGGACAACATGGAAGGCAATGACAGAGCCTTTATaGCAAAGAATGACAATCTTCCCATGCTCAGATTGT +
Preference number: 4 (lower is better)
Translates to: PRTTWKAMTEPL*QRMTIFPCSDC
Trigger: ACAATCTGAGCATGGGAAGATTGTCATTCTTTGCAATAAAGGCTCTGTCATTGCCTTCCATGTTGTCCTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
CDS-3UTR TCA 90 bp TCTCCCTACTGTCAGGTATTTCATCTAAGGTCCCTTCCTTTGAGTCCTGGGACTCAAGTCCATCTAAAATaGAACATCAAGGAGACAATG +
Preference number: 4 (lower is better)
Translates to: SPYCQVFHLRSLPLSPGTQVHLK*NIKETM
Trigger: CATTGTCTCCTTGATGTTTCATTTTAGATGGACTTG...AGTCCCAGGACTCAAAGGAAGGGACCTTAGATGAAATACCTGACAGTAGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp ATGACCAACTTAGGTGCCCCTGTTACCAACATCTCTCTCATTCTTCTTCCTGGAGTGGAAAGTTCCAAATaGGGAAAATGTCATACTCTG +
Preference number: 4 (lower is better)
Translates to: MTNLGAPVTNISLILLPGVESSK*GKCHTL
Trigger: CAGAGTATGACATTTTCCTCATTTGGAACTTTCCAC...TCCAGGAAGAAGAATGAGAGAGATGTTGGTAACAGGGGCACCTAAGTTGGTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232797.2
ENSMUST00000233126.2
CDS-3UTR TCA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAACAACATGGAAGGCAATaGCAGAGCCTTTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQQHGRQ*QSLYCK
Trigger: TTTGCAATAAAGGCTCTGTCATTGCCTTCCATGTTG...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCAACAAATGTGTGTCCTTaGTGGCTACTTGATGGACAT +
Preference number: 4 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPTNVCP*WLLDGH
Trigger: ATGTCCATCAAGTAGCCACCAAGGACACACATTTGT...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp ATCAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCAAGGAGACAATGCCATaGGACAAATGTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: INFFQPSLIQQKVSAVSVKETMP*DKCVSL
Trigger: CAAGGACACACATTTGTCCCATGGCATTGTCTCCTT...GACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCAAGGAGACAATGCCATaGGACAAATGTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: LIQQKVSAVSVHWLGANIKETMP*DKCVSL
Trigger: CAAGGACACACATTTGTCCCATGGCATTGTCTCCTT...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAATGTGAAGAGAAGGAGACAATGCCATaGGACAAATGTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: SFPGPYIAHCVFSHKCEEKETMP*DKCVSL
Trigger: CAAGGACACACATTTGTCCCATGGCATTGTCTCCTT...CTCTTCACATTTATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCAAAGTAATAGTCCCATaGAAGAGATTAAGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPKVIVP*KRLRVN
Trigger: ATTCACCCTTAATCTCTTCCATGGGACTATTACTTT...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTAAAGTAATAGTCCCATaGAAGAGATTAAGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: WKSSTVCVLGASYQLVYAKVIVP*KRLRVN
Trigger: ATTCACCCTTAATCTCTTCCATGGGACTATTACTTT...AGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TCAGACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCAAAAGTAATAGTCCCATaGAAGAGATTAAGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: SDRNNMGQNCDCGVATPSKVIVP*KRLRVN
Trigger: ATTCACCCTTAATCTCTTCCATGGGACTATTACTTT...TGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTAAAGTAATAGTCCCATaGAAGAGATTAAGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGKVIVP*KRLRVN
Trigger: ATTCACCCTTAATCTCTTCCATGGGACTATTACTTT...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TCAGACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCAATCTCTGTCAATAAATaGAGGAGATGTTATCAACCA +
Preference number: 4 (lower is better)
Translates to: SDRNNMGQNCDCGVATPSISVNK*RRCYQP
Trigger: TGGTTGATAACATCTCCTCCATTTATTGACAGAGAT...TGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAAGACAGTTTCCACCAATaGTGGAGAACATCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQDSFHQ*WRTSKL
Trigger: TAACTTTGATGTTCTCCATCATTGGTGGAAACTGTC...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp ACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTACTTGATCAAGTCCATCTAAAATaGAACATCAAGGAGACAATG +
Preference number: 4 (lower is better)
Translates to: TIWVRIVTVGWQPHHLLDQVHLK*NIKETM
Trigger: CATTGTCTCCTTGATGTTTCATTTTAGATGGACTTG...ATCAAGTAAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp ATTGGTTGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTGCTGGGTCTTTCAACATGGAAGGCAATaGCAGAGCCTTTATTGCAAA +
Preference number: 4 (lower is better)
Translates to: IGWEQISTPDFFSCCWVFQHGRQ*QSLYCK
Trigger: TTTGCAATAAAGGCTCTGTCATTGCCTTCCATGTTG...AAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCAACCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCACATCAAGGAGACAATaGCATGGGACAAATGTGTGT +
Preference number: 4 (lower is better)
Translates to: LIQQKVSAVSVHWLGANITSRRQ*HGTNVC
Trigger: ACACACATTTGTCCCATGGCATTGTCTCCTTGATGT...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp ATCAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCACATCAAGGAGACAATaGCATGGGACAAATGTGTGT +
Preference number: 4 (lower is better)
Translates to: INFFQPSLIQQKVSAVSVTSRRQ*HGTNVC
Trigger: ACACACATTTGTCCCATGGCATTGTCTCCTTGATGT...GACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TCTCCCTACTGTCAGGTATTTCATCTAAGGTCCCTTCCTTTGAGTCCTGGGACTAAAGTAATAGTCCCATaGAAGAGATTAAGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: SPYCQVFHLRSLPLSPGTKVIVP*KRLRVN
Trigger: ATTCACCCTTAATCTCTTCCATGGGACTATTACTTT...AGTCCCAGGACTCAAAGGAAGGGACCTTAGATGAAATACCTGACAGTAGGGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp GAGCAGGATGTAGCTGAGAATGCGGTTATTGGCCTTCACAATGGGAGTATCCTTAAAGTAATAGTCCCATaGAAGAGATTAAGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: EQDVAENAVIGLHNGSILKVIVP*KRLRVN
Trigger: ATTCACCCTTAATCTCTTCCATGGGACTATTACTTT...AAGGATACTCCCATTGTGAAGGCCAATAACCGCATTCTCAGCTACATCCTGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
CDS-3UTR CCA 90 bp ATCAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCTCTCATTCTTCTTCCTaGAGTAGTGAGCTTGAAAGC +
Preference number: 4 (lower is better)
Translates to: INFFQPSLIQQKVSAVSVSHSSS*SSELES
Trigger: GCTTTCAAGCTCACTACTCCAGGAAGAAGAATGAGA...GACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CAA 72 bp GTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTaGCCCAGAGATGGTAGTGTTCACAGTCAGTATGGT +
Preference number: 4 (lower is better)
Translates to: VFRAFSYNYKNN*PRDGSVHSQYG
Trigger: ACCATACTGACTGTGAACACTACCATCTCTGGGCAAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CAA 72 bp CCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATaGGTTGGGAGCAAATATCTACACCTGACTTTTTCA +
Preference number: 4 (lower is better)
Translates to: PNSAKGVSCFCP*VGSKYLHLTFS
Trigger: TGAAAAAGTCAGGTGTAGATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCACAAGTCCATCTAAAATaGAACATCAAGGAGACAATG +
Preference number: 4 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPQVHLK*NIKETM
Trigger: CATTGTCTCCTTGATGTTTCATTTTAGATGGACTTG...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCAAAATCTGAGAGAAACTaGATACCCTTGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPKSERN*IPLSSS
Trigger: AGATGATGACAAGGGTATTCAGTTTCTCTCAGATTT...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp GCTTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTGGTTTGGATGTCCAATaGAGAGCAGGGAGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: ALLPCCLQSFFLQLQEQLGLDVQ*RAGSRE
Trigger: TTCTCTGCTCCCTGCTCTTCATTGGACATCCAAACC...AAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTGCACTGTTCCATATCTGTaGTGTTCCTCCCATGGCCCA +
Preference number: 4 (lower is better)
Translates to: FTSMLSSELFLTTTRTTCTVPYL*CSSHGP
Trigger: TGGGCCATGGGAGGAACATCACAGATATGGAACAGT...GCAAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233126.2
CDS-3UTR GCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCAATTTTCCTGAATCCTaGAGTACATGCCACACTACA +
Preference number: 4 (lower is better)
Translates to: LIQQKVSAVSVHWLGANINFPES*STCHTT
Trigger: TGTAGTGTGGCATGTACTGCAGGATTCAGGAAAATT...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CCTGTCCACTTTCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAAAGTAATAGTCCCATaGAAGAGATTAAGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: PVHFPSQVPTLLIVSFHIKVIVP*KRLRVN
Trigger: ATTCACCCTTAATCTCTTCCATGGGACTATTACTTT...TATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGAAAGTGGACAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTGCTGGGTCTTTTGGAGGAAAGTAATAGTCCCATaGAAGAGATTAAGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: WEQISTPDFFSCCWVFWRKVIVP*KRLRVN
Trigger: ATTCACCCTTAATCTCTTCCATGGGACTATTACTTT...CCTCCAAAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp AGTATAGTGCTTCTGTGCTGTCATAGGCAATACTGTCACTGTACTTCACACTGCGGGTTTTCTCTATGTTaGCATACTTATCATATGGAC +
Preference number: 4 (lower is better)
Translates to: SIVLLCCHRQYCHCTSHCGFSLC*HTYHMD
Trigger: GTCCATATGATAAGTATGCCAACATAGAGAAAACCC...GCAGTGTGAAGTACAGTGACAGTATTGCCTATGACAGCACAGAAGCACTATACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CACAACGATCAGAAGAAGCTTGTAAGAAAAGTGTTTCTTTACTTATGTACCTTGGCAGGAGACCTGGTTTaGATGTCCAATGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: HNDQKKLVRKVFLYLCTLAGDLV*MSNEEQ
Trigger: CTGCTCTTCATTGGACATCCAAACCAGGTCTCCTGC...CAAGGTACATAAGTAAAGAAACACTTTTCTTACAAGCTTCTTCTGATCGTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp GCTTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTGCAGGAGACCTGGTTTaGATGTCCAATGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ALLPCCLQSFFLQLQEQLAGDLV*MSNEEQ
Trigger: CTGCTCTTCATTGGACATCCAAACCAGGTCTCCTGC...AAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTGCACCCTTGTCATCATCTaGGATGACCAGTCCTATCCA +
Preference number: 4 (lower is better)
Translates to: FTSMLSSELFLTTTRTTCTLVII*DDQSYP
Trigger: TGGATAGGACTGGTCATCTCAGATGATGACAAGGGT...GCAAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CACAACGATCAGAAGAAGCTTGTAAGAAAAGTGTTTCTTTACTTATGTACCTTGACCCTTGTCATCATCTaGGATGACCAGTCCTATCCA +
Preference number: 4 (lower is better)
Translates to: HNDQKKLVRKVFLYLCTLTLVII*DDQSYP
Trigger: TGGATAGGACTGGTCATCTCAGATGATGACAAGGGT...CAAGGTACATAAGTAAAGAAACACTTTTCTTACAAGCTTCTTCTGATCGTTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCAAATCTGAGAGAAACTaGATACCCTTGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: LIQQKVSAVSVHWLGANIKSERN*IPLSSS
Trigger: AGATGATGACAAGGGTATTCAGTTTCTCTCAGATTT...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAATGTGAAGAGAAATCTGAGAGAAACTaGATACCCTTGTCATCATCT +
Preference number: 4 (lower is better)
Translates to: SFPGPYIAHCVFSHKCEEKSERN*IPLSSS
Trigger: AGATGATGACAAGGGTATTCAGTTTCTCTCAGATTT...CTCTTCACATTTATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp TTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTGCGAATCCTGCAGTACATaGCACACTACACACAGAGGA +
Preference number: 4 (lower is better)
Translates to: FTSMLSSELFLTTTRTTCESCST*HTTHRG
Trigger: TCCTCTGTGTGTAGTGTGGCATGTACTGCAGGATTC...GCAAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAAAAAGTAATAGTCCCATaGAAGAGATTAAGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQKVIVP*KRLRVN
Trigger: ATTCACCCTTAATCTCTTCCATGGGACTATTACTTT...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCGGGTTTTCTCTATGTTaGCATACTTATCATATGGAC +
Preference number: 4 (lower is better)
Translates to: LIQQKVSAVSVHWLGANIGFSLC*HTYHMD
Trigger: GTCCATATGATAAGTATGCCAACATAGAGAAAACCC...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp GTTCCATATTACCTGAGACTGTTGGTCCTCATACATGATGGCCCTACTCATCAAATCTCTGTCAATAAATaGAGGAGATGTTATCAACCA +
Preference number: 4 (lower is better)
Translates to: VPYYLRLLVLIHDGPTHQISVNK*RRCYQP
Trigger: TGGTTGATAACATCTCCTCCATTTATTGACAGAGAT...TTGATGAGTAGGGCCATCATGTATGAGGACCAACAGTCTCAGGTAATATGGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTGCTATCCCAGGACAACATaGAAGGCAATGACAGAGCCT +
Preference number: 4 (lower is better)
Translates to: FTSMLSSELFLTTTRTTCYPRTT*KAMTEP
Trigger: AGGCTCTGTCATTGCCTTCCATGTTGTCCTGGGATA...GCAAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp CACAACGATCAGAAGAAGCTTGTAAGAAAAGTGTTTCTTTACTTATGTACCTTGGAGGAGGGAACCTGCTaGCAAACAGTGAAAAATCTT +
Preference number: 4 (lower is better)
Translates to: HNDQKKLVRKVFLYLCTLEEGTC*QTVKNL
Trigger: AAGATTTTTCACTGTTTGTCAGCAGGTTCCCTCCTC...CAAGGTACATAAGTAAAGAAACACTTTTCTTACAAGCTTCTTCTGATCGTTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232951.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CACAACGATCAGAAGAAGCTTGTAAGAAAAGTGTTTCTTTACTTATGTACCTTGAAGGAGACAATGCCATaGGACAAATGTGTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: HNDQKKLVRKVFLYLCTLKETMP*DKCVSL
Trigger: CAAGGACACACATTTGTCCCATGGCATTGTCTCCTT...CAAGGTACATAAGTAAAGAAACACTTTTCTTACAAGCTTCTTCTGATCGTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAATGTGAAGAGAAAGTAATAGTCCCATaGAAGAGATTAAGGGTGAAT +
Preference number: 4 (lower is better)
Translates to: SFPGPYIAHCVFSHKCEEKVIVP*KRLRVN
Trigger: ATTCACCCTTAATCTCTTCCATGGGACTATTACTTT...CTCTTCACATTTATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCATCTCTGTCAATAAATaGAGGAGATGTTATCAACCA +
Preference number: 4 (lower is better)
Translates to: LIQQKVSAVSVHWLGANIISVNK*RRCYQP
Trigger: TGGTTGATAACATCTCCTCCATTTATTGACAGAGAT...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR GCA 90 bp TTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTGCACATCAAGGAGACAATaGCATGGGACAAATGTGTGT +
Preference number: 4 (lower is better)
Translates to: FTSMLSSELFLTTTRTTCTSRRQ*HGTNVC
Trigger: ACACACATTTGTCCCATGGCATTGTCTCCTTGATGT...GCAAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp TTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTGCGACAGTTTCCACCAATaGTGGAGAACATCAAAGTTA +
Preference number: 4 (lower is better)
Translates to: FTSMLSSELFLTTTRTTCDSFHQ*WRTSKL
Trigger: TAACTTTGATGTTCTCCATCATTGGTGGAAACTGTC...GCAAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR TCA 90 bp GCTTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTGTGGAAAGTTCCAAATaGGGAAAATGTCATACTCTG +
Preference number: 4 (lower is better)
Translates to: ALLPCCLQSFFLQLQEQLVESSK*GKCHTL
Trigger: CAGAGTATGACATTTTCCTCATTTGGAACTTTCCAC...AAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
CDS-3UTR CCA 90 bp CACAACGATCAGAAGAAGCTTGTAAGAAAAGTGTTTCTTTACTTATGTACCTTGCCACAGAGAACAAATTaGATTAGGGTACAAATGGGA +
Preference number: 4 (lower is better)
Translates to: HNDQKKLVRKVFLYLCTLPQRTN*IRVQMG
Trigger: TCCCATTTGTACCCTAATCCAATTTGTTCTCTGTGG...CAAGGTACATAAGTAAAGAAACACTTTTCTTACAAGCTTCTTCTGATCGTTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
3UTR CAA 72 bp ATTGTGTCTTTTCACATAAATGTGAAGAGCCTTATATaGCAGGCACAATCTGCTATGCATTGTCCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: IVSFHINVKSLI*QAQSAMHCPFN
Trigger: ATTAAAGGGACAATGCATAGCAGATTGTGCCTGCAATATAAGGCTCTTCACATTTATGTGAAAAGACACAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CCA 90 bp TTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTGCATCTCTGTCAATAAATaGAGGAGATGTTATCAACCA +
Preference number: 4 (lower is better)
Translates to: FTSMLSSELFLTTTRTTCISVNK*RRCYQP
Trigger: TGGTTGATAACATCTCCTCCATTTATTGACAGAGAT...GCAAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp AGGCCTTGGGGCCTCCCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCTGGGTTTTCTCTATGTaGGCATACTTATCATATGGA +
Preference number: 5 (lower is better)
Translates to: RPWGLPLSWTPLWTCHWTWVFSM*AYLSYG
Trigger: TCCATATGATAAGTATGCCAACATAGAGAAAACCCA...GGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGGGAGGCCCCAAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGACACACTGTTCCATATaGATGTTCCTCCCATGGCCC +
Preference number: 5 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQTHCSI*MFLPWP
Trigger: GGGCCATGGGAGGAACATCAATATGGAACAGTGTGT...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232797.2
CDS-3UTR CAA 90 bp CCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCAGAAAACCAGTGGCATaGAAGAATGCATTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: PLSWTPLWTCHWTFLSSGRKPVA*KNALPV
Trigger: AACTGGCAATGCATTCTTCAATGCCACTGGTTTTCT...GCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp CCACTGAGCTGGACCCCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCATATCTACTGGGTATTaGGCAGTGTTCATTGTTTGC +
Preference number: 5 (lower is better)
Translates to: PLSWTPLWTCHWTFLSSGISTGY*AVFIVC
Trigger: GCAAACAATGAACACTGCCAAATACCCAGTAGATAT...GCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGGGGTCCAGCTCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGAGAAAACCAGTGGCATaGAAGAATGCATTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQRKPVA*KNALPV
Trigger: AACTGGCAATGCATTCTTCAATGCCACTGGTTTTCT...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp CCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTGAGGATTAGGATATCTACTGGGTATTaGGCAGTGTTCATTGTTTGC +
Preference number: 5 (lower is better)
Translates to: PLHLTSKCPWSSSPLRIRISTGY*AVFIVC
Trigger: GCAAACAATGAACACTGCCAAATACCCAGTAGATAT...CCTAATCCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp CCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTGAGGATTAGGACCACAGTTATTGTTTaGGCCAACACTGTAGAAACA +
Preference number: 5 (lower is better)
Translates to: PLHLTSKCPWSSSPLRIRTTVIV*ANTVET
Trigger: TGTTTCTACAGTGTTGGCCAAAACAATAACTGTGGT...CCTAATCCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp CTCTGGTGCATTCTGGGGTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTAGGAATTTGGCTTCATaGAATGTGTCAGGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: LWCILGFPQSPLSCGCLFRNLAS*NVSGRF
Trigger: GAACCTTCCTGACACATTCAATGAAGCCAAATTCCT...AAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAACCCCAGAATGCACCAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp CCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGTCCCTTGAGGATTAGGAGATATATGAAGTTCTaGTCTCTGTGGAAAACAAGG +
Preference number: 5 (lower is better)
Translates to: PLHLTSKCPWSSSPLRIRRYMKF*SLWKTR
Trigger: CCTTGTTTTCCACAGAGACAAGAACTTCATATATCT...CCTAATCCTCAAGGGACTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
CDS-3UTR CAA 90 bp TGGATACCTCCAACACCCACTTCACCTGACCTCCAAATGCCCTTGGTCCTCCAGCTTCCCATGCTCAGATaGTATATCTCTGTCAATAAA +
Preference number: 5 (lower is better)
Translates to: WIPPTPTSPDLQMPLVLQLPMLR*YISVNK
Trigger: TTTATTGACAGAGATATACAATCTGAGCATGGGAAG...CTGGAGGACCAAGGGCATTTGGAGGTCAGGTGAAGTGGGTGTTGGAGGTATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS CCA 90 bp ATGCCACACTACACACAGAGGAGGGAACCACTGATGTTCCTCCCATaGCCCATTCCAAATCATCAGATATATGAAGTTCTTGTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: MPHYTQRREPLMFLP*PIPNHQIYEVLVSV
Trigger: CACAGAGACAAGAACTTCATATATCTGATGATTTGGAATGGGCCATGGGAGGAACATCAGTGGTTCCCTCCTCTGTGTGTAGTGTGGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233280.2
CDS-3UTR CAA 90 bp TCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTATATCTACTGGGTATTaGGCAGTGTTCATTGTTTGC +
Preference number: 5 (lower is better)
Translates to: SSTVCVLGASYQLVYAACISTGY*AVFIVC
Trigger: GCAAACAATGAACACTGCCAAATACCCAGTAGATAT...ACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp CACCCCCATACACCCTCTGACTGCTCCATATTTCATGCCTTCACGCTACCTCACTGGGTTTTCTCTATGTaGGCATACTTATCATATGGA +
Preference number: 5 (lower is better)
Translates to: HPHTPSDCSIFHAFTLPHWVFSM*AYLSYG
Trigger: TCCATATGATAAGTATGCCAACATAGAGAAAACCCA...GTGAGGTAGCGTGAAGGCATGAAATATGGAGCAGTCAGAGGGTGTATGGGGGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCAGGAATTTGGCTTCATaGAATGTGTCAGGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPRNLAS*NVSGRF
Trigger: GAACCTTCCTGACACATTCAATGAAGCCAAATTCCT...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTAGAAAACCAGTGGCATaGAAGAATGCATTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGRKPVA*KNALPV
Trigger: AACTGGCAATGCATTCTTCAATGCCACTGGTTTTCT...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp CCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCCCTCAGAGCTTCAGTCCTTTAGAAAACCAGTGGCATaGAAGAATGCATTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: PVVACLHSFCWPSELQSFRKPVA*KNALPV
Trigger: AACTGGCAATGCATTCTTCAATGCCACTGGTTTTCT...AAAGGACTGAAGCTCTGAGGGCCAGCAGAAAGAATGTAAACAGGCAACCACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCAGAAAACCAGTGGCATaGAAGAATGCATTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPRKPVA*KNALPV
Trigger: AACTGGCAATGCATTCTTCAATGCCACTGGTTTTCT...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp TCAGACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCAAGAAAACCAGTGGCATaGAAGAATGCATTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: SDRNNMGQNCDCGVATPSRKPVA*KNALPV
Trigger: AACTGGCAATGCATTCTTCAATGCCACTGGTTTTCT...TGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp GCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAGAAAACCAGTGGCATaGAAGAATGCATTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: AFPNSAKGVSCFCPLVGSRKPVA*KNALPV
Trigger: AACTGGCAATGCATTCTTCAATGCCACTGGTTTTCT...GCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS TCA 90 bp CACAATCAAAGCAGCAGTCTGCTGTTTCTTTCTGATGAATTTTCCTaGATCCTGCAGTACATGCCACACTACACACAGAGGAGGGAACTG +
Preference number: 5 (lower is better)
Translates to: HNQSSSLLFLSDEFS*ILQYMPHYTQRREL
Trigger: CAGTTCCCTCCTCTGTGTGTAGTGTGGCATGTACTGCAGGATTCAGGAAAATTCATCAGAAAGAAACAGCAGACTGCTGCTTTGATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022438.12
ENSMUST00000159674.4
ENSMUST00000233394.2
ENSMUST00000233848.2
CDS TCA 90 bp CACAATCAAAGCAGCAGTCTGCTGTTTCTTTCTGATGAATTTTCCTaGATCCTGCAGTACATGCCACACTACACACAGAGGAGGGAACCT +
Preference number: 5 (lower is better)
Translates to: HNQSSSLLFLSDEFS*ILQYMPHYTQRREP
Trigger: AGGTTCCCTCCTCTGTGTGTAGTGTGGCATGTACTGCAGGATTCAGGAAAATTCATCAGAAAGAAACAGCAGACTGCTGCTTTGATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232951.2
ENSMUST00000233920.2
CDS TCA 90 bp CACAATCAAAGCAGCAGTCTGCTGTTTCTTTCTGATGAATTTTCCTaGATCCTGCAGTACATGCCACACTACACACAGAGGAGGGAACCA +
Preference number: 5 (lower is better)
Translates to: HNQSSSLLFLSDEFS*ILQYMPHYTQRREP
Trigger: TGGTTCCCTCCTCTGTGTGTAGTGTGGCATGTACTGCAGGATTCAGGAAAATTCATCAGAAAGAAACAGCAGACTGCTGCTTTGATTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233280.2
CDS GCA 90 bp GTCTGCTGTTTCTTTCTGATGAATTTTCCTGAATCCTGCAGTACATaGCACACTACACACAGAGGAGGGAACCTGCTGACAAACAGTGAA +
Preference number: 5 (lower is better)
Translates to: VCCFFLMNFPESCST*HTTHRGGNLLTNSE
Trigger: TTCACTGTTTGTCAGCAGGTTCCCTCCTCTGTGTGTAGTGTGGCATGTACTGCAGGATTCAGGAAAATTCATCAGAAAGAAACAGCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232951.2
ENSMUST00000233920.2
CDS CCA 90 bp TACATGCCACACTACACACAGAGGAGGGAACTGATGTTCCTCCCATaGCCCATTCCAAATCATCAGATATATGAAGTTCTTGTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: YMPHYTQRRELMFLP*PIPNHQIYEVLVSV
Trigger: CACAGAGACAAGAACTTCATATATCTGATGATTTGGAATGGGCCATGGGAGGAACATCAGTTCCCTCCTCTGTGTGTAGTGTGGCATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022438.12
ENSMUST00000159674.4
ENSMUST00000233394.2
ENSMUST00000233848.2
CDS-3UTR CAA 90 bp TGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTATATCTACTGGGTATTaGGCAGTGTTCATTGTTTGC +
Preference number: 5 (lower is better)
Translates to: WKSSTVCVLGASYQLVYAISTGY*AVFIVC
Trigger: GCAAACAATGAACACTGCCAAATACCCAGTAGATAT...AGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp GTTCCCACAATCTCCTCTCTCCTGTGGTTGCCTGTTTACATTCTTTCTGCTGGCATATCTACTGGGTATTaGGCAGTGTTCATTGTTTGC +
Preference number: 5 (lower is better)
Translates to: VPTISSLLWLPVYILSAGISTGY*AVFIVC
Trigger: GCAAACAATGAACACTGCCAAATACCCAGTAGATAT...GCCAGCAGAAAGAATGTAAACAGGCAACCACAGGAGAGAGGAGATTGTGGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp GCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCATATCTACTGGGTATTaGGCAGTGTTCATTGTTTGC +
Preference number: 5 (lower is better)
Translates to: AFPNSAKGVSCFCPLVGSISTGY*AVFIVC
Trigger: GCAAACAATGAACACTGCCAAATACCCAGTAGATAT...GCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTAATATCTACTGGGTATTaGGCAGTGTTCATTGTTTGC +
Preference number: 5 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLISTGY*AVFIVC
Trigger: GCAAACAATGAACACTGCCAAATACCCAGTAGATAT...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp TTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTATCCCACCACAGTTATTGTTTaGGCCAACACTGTAGAAACA +
Preference number: 5 (lower is better)
Translates to: FGPVTGPSFPQAHLHFYPTTVIV*ANTVET
Trigger: TGTTTCTACAGTGTTGGCCAAAACAATAACTGTGGT...GGGATAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp GACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTACCACAGTTATTGTTTaGGCCAACACTGTAGAAACA +
Preference number: 5 (lower is better)
Translates to: DRNNMGQNCDCGVATPSLTTVIV*ANTVET
Trigger: TGTTTCTACAGTGTTGGCCAAAACAATAACTGTGGT...AAGTGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp TCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTCTTCCCATGCTCAGATaGTATATCTCTGTCAATAAA +
Preference number: 5 (lower is better)
Translates to: SSTVCVLGASYQLVYAACLPMLR*YISVNK
Trigger: TTTATTGACAGAGATATACAATCTGAGCATGGGAAG...ACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTGCATTGAAGAATGCATaGCCAGTTTTAAGGATGTTT +
Preference number: 5 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGALKNA*PVLRMF
Trigger: AAACATCCTTAAAACTGGCAATGCATTCTTCAATGC...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTAGCATTGAAGAATGCATaGCCAGTTTTAAGGATGTTT +
Preference number: 5 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLALKNA*PVLRMF
Trigger: AAACATCCTTAAAACTGGCAATGCATTCTTCAATGC...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp TGGAAGTCCTCTACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCATTGAAGAATGCATaGCCAGTTTTAAGGATGTTT +
Preference number: 5 (lower is better)
Translates to: WKSSTVCVLGASYQLVYAALKNA*PVLRMF
Trigger: AAACATCCTTAAAACTGGCAATGCATTCTTCAATGC...AGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTAGAGGACTTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp TACTGTATGTGTGTTGGGGGCCTCATATCAGCTGGTGTATGCTGCCTGTTTGGTAGATATATGAAGTTCTaGTCTCTGTGGAAAACAAGG +
Preference number: 5 (lower is better)
Translates to: YCMCVGGLISAGVCCLFGRYMKF*SLWKTR
Trigger: CCTTGTTTTCCACAGAGACAAGAACTTCATATATCT...ACCAAACAGGCAGCATACACCAGCTGATATGAGGCCCCCAACACACATACAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
CDS-3UTR CAA 90 bp CCACTTTGGACCTGTCACTGGACCTTCCTTTCCTCAGGCACATCTCCATTTCTAAGATATATGAAGTTCTaGTCTCTGTGGAAAACAAGG +
Preference number: 5 (lower is better)
Translates to: PLWTCHWTFLSSGTSPFLRYMKF*SLWKTR
Trigger: CCTTGTTTTCCACAGAGACAAGAACTTCATATATCT...TAGAAATGGAGATGTGCCTGAGGAAAGGAAGGTCCAGTGACAGGTCCAAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
CDS-3UTR CAA 90 bp TCAGACAGGAACAATATGGGTCAGAATTGTGACTGTGGGGTGGCAACCCCATCACTTCCCATGCTCAGATaGTATATCTCTGTCAATAAA +
Preference number: 5 (lower is better)
Translates to: SDRNNMGQNCDCGVATPSLPMLR*YISVNK
Trigger: TTTATTGACAGAGATATACAATCTGAGCATGGGAAG...TGATGGGGTTGCCACCCCACAGTCACAATTCTGACCCATATTGTTCCTGTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp TGGGAGCAAATATCTACACCTGACTTTTTCAGCTGTTGCTGGGTCTTTTGGAGGAGGAATTTGGCTTCATaGAATGTGTCAGGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: WEQISTPDFFSCCWVFWRRNLAS*NVSGRF
Trigger: GAACCTTCCTGACACATTCAATGAAGCCAAATTCCT...CCTCCAAAAGACCCAGCAACAGCTGAAAAAGTCAGGTGTAGATATTTGCTCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp CTTCTTCCTGGAGTAGTGAGCTTGAAAGCCATGACCACAGTTATTGTTTTGGCCAGAAAACCAGTGGCATaGAAGAATGCATTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: LLPGVVSLKAMTTVIVLARKPVA*KNALPV
Trigger: AACTGGCAATGCATTCTTCAATGCCACTGGTTTTCT...GGCCAAAACAATAACTGTGGTCATGGCTTTCAAGCTCACTACTCCAGGAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233651.2
ENSMUST00000233766.2
CDS GCA 90 bp GGAAACCTCATTTTCTGGGCACTGAACACAATCAAAGCAGCAGTCTaGTGTTTCTTTCTGATGAATTTTCCTGAATCCTGCAGTACATGC +
Preference number: 5 (lower is better)
Translates to: GNLIFWALNTIKAAV*CFFLMNFPESCSTC
Trigger: GCATGTACTGCAGGATTCAGGAAAATTCATCAGAAAGAAACAGCAGACTGCTGCTTTGATTGTGTTCAGTGCCCAGAAAATGAGGTTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022438.12
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp TCTCCCTACTGTCAGGTATTTCATCTAAGGTCCCTTCCTTTGAGTCCTGGGACTTGGGTTTTCTCTATGTaGGCATACTTATCATATGGA +
Preference number: 5 (lower is better)
Translates to: SPYCQVFHLRSLPLSPGTWVFSM*AYLSYG
Trigger: TCCATATGATAAGTATGCCAACATAGAGAAAACCCA...AGTCCCAGGACTCAAAGGAAGGGACCTTAGATGAAATACCTGACAGTAGGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp CCTGTCCACTTTCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAACCACAGTTATTGTTTaGGCCAACACTGTAGAAACA +
Preference number: 5 (lower is better)
Translates to: PVHFPSQVPTLLIVSFHITTVIV*ANTVET
Trigger: TGTTTCTACAGTGTTGGCCAAAACAATAACTGTGGT...TATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGAAAGTGGACAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp GTCCTCATACATGATGGCCCTACTCATCAACTTCTTTCAGCCTTCCCTAATTCAAGGAATTTGGCTTCATaGAATGTGTCAGGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: VLIHDGPTHQLLSAFPNSRNLAS*NVSGRF
Trigger: GAACCTTCCTGACACATTCAATGAAGCCAAATTCCT...TGAATTAGGGAAGGCTGAAAGAAGTTGATGAGTAGGGCCATCATGTATGAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS TCA 90 bp TTGTCATCATCTGAGATGACCAGTCCTATCCAAGTCCATCTAAAATaGAACATCAAGGAGACAATGCCATGGGACAAATGTGTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: LSSSEMTSPIQVHLK*NIKETMPWDKCVSL
Trigger: CAAGGACACACATTTGTCCCATGGCATTGTCTCCTTGATGTTTCATTTTAGATGGACTTGGATAGGACTGGTCATCTCAGATGATGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000022438.12
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS CCA 90 bp CTTCACACACTGTTCCATATCTGTTTCATTGGAAACCTCATTTTCTaGGCACTGAACACAATCAAAGCAGCAGTCTGCTGTTTCTTTCTG +
Preference number: 5 (lower is better)
Translates to: LHTLFHICFIGNLIF*ALNTIKAAVCCFFL
Trigger: CAGAAAGAAACAGCAGACTGCTGCTTTGATTGTGTTCAGTGCCCAGAAAATGAGGTTTCCAATGAAACAGATATGGAACAGTGTGTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233848.2
CDS-3UTR CAA 90 bp CCTGTCCACTTTCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAGCATTGAAGAATGCATaGCCAGTTTTAAGGATGTTT +
Preference number: 5 (lower is better)
Translates to: PVHFPSQVPTLLIVSFHIALKNA*PVLRMF
Trigger: AAACATCCTTAAAACTGGCAATGCATTCTTCAATGC...TATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGAAAGTGGACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp CCTGTCCACTTTCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAGATATATGAAGTTCTaGTCTCTGTGGAAAACAAGG +
Preference number: 5 (lower is better)
Translates to: PVHFPSQVPTLLIVSFHIRYMKF*SLWKTR
Trigger: CCTTGTTTTCCACAGAGACAAGAACTTCATATATCT...TATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGAAAGTGGACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
CDS-3UTR CAA 90 bp CCTGTCCACTTTCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATATGGGTTTTCTCTATGTaGGCATACTTATCATATGGA +
Preference number: 5 (lower is better)
Translates to: PVHFPSQVPTLLIVSFHIWVFSM*AYLSYG
Trigger: TCCATATGATAAGTATGCCAACATAGAGAAAACCCA...TATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGAAAGTGGACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp TCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAATGTGAAGAGAGGAATTTGGCTTCATaGAATGTGTCAGGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: SFPGPYIAHCVFSHKCEERNLAS*NVSGRF
Trigger: GAACCTTCCTGACACATTCAATGAAGCCAAATTCCT...CTCTTCACATTTATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp ATCAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCAGGAATTTGGCTTCATaGAATGTGTCAGGAAGGTTC +
Preference number: 5 (lower is better)
Translates to: INFFQPSLIQQKVSAVSVRNLAS*NVSGRF
Trigger: GAACCTTCCTGACACATTCAATGAAGCCAAATTCCT...GACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp TCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAATGTGAAGAGCCTTAGAAAACCAGTGGCATaGAAGAATGCATTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: SQVPTLLIVSFHINVKSLRKPVA*KNALPV
Trigger: AACTGGCAATGCATTCTTCAATGCCACTGGTTTTCT...AAGGCTCTTCACATTTATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS TCA 90 bp CCTTGTGGAAAGTTCCAAATGAGGAAAATGTCATACTCTGTACACTaGTTTTCCCTATGCTTCATGTTCACCAGTTCTCCAACAGGGTTA +
Preference number: 5 (lower is better)
Translates to: PCGKFQMRKMSYSVH*FSLCFMFTSSPTGL
Trigger: TAACCCTGTTGGAGAACTGGTGAACATGAAGCATAGGGAAAATCAGTGTACAGAGTATGACATTTTCCTCATTTGGAACTTTCCACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022438.12
ENSMUST00000159674.4
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
CDS GCA 90 bp GTTGGCATACTTATCATATGGACACTTCACACACTGTTCCATATCTaGTGTTTCATTGGAAACCTCATTTTCTGGGCACTGAACACAATC +
Preference number: 5 (lower is better)
Translates to: VGILIIWTLHTLFHI*CFIGNLIFWALNTI
Trigger: GATTGTGTTCAGTGCCCAGAAAATGAGGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTGAAGTGTCCATATGATAAGTATGCCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022438.12
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCAGCATTGAAGAATGCATaGCCAGTTTTAAGGATGTTT +
Preference number: 5 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPALKNA*PVLRMF
Trigger: AAACATCCTTAAAACTGGCAATGCATTCTTCAATGC...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp CTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCATTGGTTGGGAGCAAATATCATATCTACTGGGTATTaGGCAGTGTTCATTGTTTGC +
Preference number: 5 (lower is better)
Translates to: LIQQKVSAVSVHWLGANIISTGY*AVFIVC
Trigger: GCAAACAATGAACACTGCCAAATACCCAGTAGATAT...GATATTTGCTCCCAACCAATGGACAGAAACAGCTGACACCTTTTGCTGAATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp CAACTTCTTTCAGCCTTCCCTAATTCAGCAAAAGGTGTCAGCTGTTTCTGTCCAAGATATATGAAGTTCTaGTCTCTGTGGAAAACAAGG +
Preference number: 5 (lower is better)
Translates to: QLLSAFPNSAKGVSCFCPRYMKF*SLWKTR
Trigger: CCTTGTTTTCCACAGAGACAAGAACTTCATATATCT...TGGACAGAAACAGCTGACACCTTTTGCTGAATTAGGGAAGGCTGAAAGAAGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
CDS-3UTR CAA 90 bp TCCTTCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAATGTGAAGAGACCACAGTTATTGTTTaGGCCAACACTGTAGAAACA +
Preference number: 5 (lower is better)
Translates to: SFPGPYIAHCVFSHKCEETTVIV*ANTVET
Trigger: TGTTTCTACAGTGTTGGCCAAAACAATAACTGTGGT...CTCTTCACATTTATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS CCA 90 bp ACTTATCATATGGACACTTCACACACTGTTCCATATCTGTTTCATTaGAAACCTCATTTTCTGGGCACTGAACACAATCAAAGCAGCAGT +
Preference number: 5 (lower is better)
Translates to: TYHMDTSHTVPYLFH*KPHFLGTEHNQSSS
Trigger: ACTGCTGCTTTGATTGTGTTCAGTGCCCAGAAAATGAGGTTTCCAATGAAACAGATATGGAACAGTGTGTGAAGTGTCCATATGATAAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233848.2
CDS-3UTR CAA 90 bp TCCCAGGTCCCTACATTGCTCATTGTGTCTTTTCACATAAATGTGAAGAGCCTTAGATATATGAAGTTCTaGTCTCTGTGGAAAACAAGG +
Preference number: 5 (lower is better)
Translates to: SQVPTLLIVSFHINVKSLRYMKF*SLWKTR
Trigger: CCTTGTTTTCCACAGAGACAAGAACTTCATATATCT...AAGGCTCTTCACATTTATGTGAAAAGACACAATGAGCAATGTAGGGACCTGGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232797.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
CDS-3UTR CAA 90 bp CACAACGATCAGAAGAAGCTTGTAAGAAAAGTGTTTCTTTACTTATGTACCTTGAGAAAACCAGTGGCATaGAAGAATGCATTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: HNDQKKLVRKVFLYLCTLRKPVA*KNALPV
Trigger: AACTGGCAATGCATTCTTCAATGCCACTGGTTTTCT...CAAGGTACATAAGTAAAGAAACACTTTTCTTACAAGCTTCTTCTGATCGTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp GCTTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTATATCTACTGGGTATTaGGCAGTGTTCATTGTTTGC +
Preference number: 5 (lower is better)
Translates to: ALLPCCLQSFFLQLQEQLISTGY*AVFIVC
Trigger: GCAAACAATGAACACTGCCAAATACCCAGTAGATAT...AAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp GCTTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTACCACAGTTATTGTTTaGGCCAACACTGTAGAAACA +
Preference number: 5 (lower is better)
Translates to: ALLPCCLQSFFLQLQEQLTTVIV*ANTVET
Trigger: TGTTTCTACAGTGTTGGCCAAAACAATAACTGTGGT...AAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS TCA 90 bp ATGCTTGATCCAAACCTCTCAATAAATCATGACAGTTTCCACCAATaGTGGAGAACATCAAAGTTATGTTGGGTAAAAGATAAGGATTCT +
Preference number: 5 (lower is better)
Translates to: MLDPNLSINHDSFHQ*WRTSKLCWVKDKDS
Trigger: AGAATCCTTATCTTTTACCCAACATAACTTTGATGTTCTCCATCATTGGTGGAAACTGTCATGATTTATTGAGAGGTTTGGATCAAGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000022438.12
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS GCA 90 bp ATCTCCATCATTATCTTCACTATTCTTTATCCTCCAAAAGCAACTTaGTTCAGTCAAACAGCACAAGATGAGAGAAAACTTCAGAAACAA +
Preference number: 5 (lower is better)
Translates to: ISIIIFTILYPPKAT*FSQTAQDERKLQKQ
Trigger: TTGTTTCTGAAGTTTTCTCTCATCTTGTGCTGTTTGACTGAAGCAAGTTGCTTTTGGAGGATAAAGAATAGTGAAGATAATGATGGAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENSMUST00000022438.12
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS GCA 90 bp CAAATTGTAACCTTCATCACTCATCACCATATCATAGTTGTGCAGTaGTGTCCATTCCAATGTGTTGTTGAATGTAATATGATCCATTTT +
Preference number: 5 (lower is better)
Translates to: QIVTFITHHHIIVVQ*CPFQCVVECNMIHF
Trigger: AAAATGGATCATATTACATTCAACAACACATTGGAATGGACAGCACTGCACAACTATGATATGGTGATGAGTGATGAAGGTTACAATTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000022438.12
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp TTTACTTCCATGTTGTCTTCAGAGCTTTTTCTTACAACTACAAGAACAACTTGCTGGGTTTTCTCTATGTaGGCATACTTATCATATGGA +
Preference number: 5 (lower is better)
Translates to: FTSMLSSELFLTTTRTTCWVFSM*AYLSYG
Trigger: TCCATATGATAAGTATGCCAACATAGAGAAAACCCA...GCAAGTTGTTCTTGTAGTTGTAAGAAAAAGCTCTGAAGACAACATGGAAGTAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS-3UTR CAA 90 bp CACAACGATCAGAAGAAGCTTGTAAGAAAAGTGTTTCTTTACTTATGTACCTTGCTTCCCATGCTCAGATaGTATATCTCTGTCAATAAA +
Preference number: 5 (lower is better)
Translates to: HNDQKKLVRKVFLYLCTLLPMLR*YISVNK
Trigger: TTTATTGACAGAGATATACAATCTGAGCATGGGAAG...CAAGGTACATAAGTAAAGAAACACTTTTCTTACAAGCTTCTTCTGATCGTTGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS TCA 72 bp ATGCCATGGGACAAATGTGTGTCCTTGGTGGCTACTTaGTGGACATGGTGCAGCCGGTCATGGTCATGTAGG +
Preference number: 6 (lower is better)
Translates to: MPWDKCVSLVAT*WTWCSRSWSCR
Trigger: CCTACATGACCATGACCGGCTGCACCATGTCCATCAAGTAGCCACCAAGGACACACATTTGTCCCATGGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENSMUST00000022438.12
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS GCA 72 bp TTCTTTCTGATGAATTTTCCTGAATCCTGCAGTACATaGCACACTACACACAGAGGAGGGAACCTGCTGACA +
Preference number: 6 (lower is better)
Translates to: FFLMNFPESCST*HTTHRGGNLLT
Trigger: TGTCAGCAGGTTCCCTCCTCTGTGTGTAGTGTGGCATGTACTGCAGGATTCAGGAAAATTCATCAGAAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232951.2
ENSMUST00000233920.2
CDS CCA 72 bp CACTACACACAGAGGAGGGAACTGATGTTCCTCCCATaGCCCATTCCAAATCATCAGATATATGAAGTTCTT +
Preference number: 6 (lower is better)
Translates to: HYTQRRELMFLP*PIPNHQIYEVL
Trigger: AAGAACTTCATATATCTGATGATTTGGAATGGGCCATGGGAGGAACATCAGTTCCCTCCTCTGTGTGTAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000022438.12
ENSMUST00000159674.4
ENSMUST00000233394.2
ENSMUST00000233848.2
CDS CCA 72 bp TACACACAGAGGAGGGAACCACTGATGTTCCTCCCATaGCCCATTCCAAATCATCAGATATATGAAGTTCTT +
Preference number: 6 (lower is better)
Translates to: YTQRREPLMFLP*PIPNHQIYEVL
Trigger: AAGAACTTCATATATCTGATGATTTGGAATGGGCCATGGGAGGAACATCAGTGGTTCCCTCCTCTGTGTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233280.2
CDS CCA 72 bp TTCCATATCTGCTGTTTCATTGGAAACCTCATTTTCTaGGCACTGAACACAATCAAAGCAGCAGTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: FHICCFIGNLIF*ALNTIKAAVCC
Trigger: ACAGCAGACTGCTGCTTTGATTGTGTTCAGTGCCCAGAAAATGAGGTTTCCAATGAAACAGCAGATATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022438.12
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233920.2
CDS CAA 72 bp GATACAGCTCTTGAGAGGCAGTGGGTTTTCTCTATGTaGGCATACTTATCATATGGACACTTCACACACTGT +
Preference number: 6 (lower is better)
Translates to: DTALERQWVFSM*AYLSYGHFTHC
Trigger: ACAGTGTGTGAAGTGTCCATATGATAAGTATGCCAACATAGAGAAAACCCACTGCCTCTCAAGAGCTGTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022438.12
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS CAA 90 bp GCCAGAAATGATACAGCTCTTGAGAGGCAGTGGGTTTTCTCTATGTaGGCATACTTATCATATGGACACTTCACACACTGTTCCATATCT +
Preference number: 6 (lower is better)
Translates to: ARNDTALERQWVFSM*AYLSYGHFTHCSIS
Trigger: AGATATGGAACAGTGTGTGAAGTGTCCATATGATAAGTATGCCAACATAGAGAAAACCCACTGCCTCTCAAGAGCTGTATCATTTCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000022438.12
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS TCA 72 bp TCTGAGATGACCAGTCCTATCCAAGTCCATCTAAAATaGAACATCAAGGAGACAATGCCATGGGACAAATGT +
Preference number: 6 (lower is better)
Translates to: SEMTSPIQVHLK*NIKETMPWDKC
Trigger: ACATTTGTCCCATGGCATTGTCTCCTTGATGTTTCATTTTAGATGGACTTGGATAGGACTGGTCATCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000022438.12
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS GCA 72 bp ATTTTCTGGGCACTGAACACAATCAAAGCAGCAGTCTaGTGTTTCTTTCTGATGAATTTTCCTGAATCCTGC +
Preference number: 6 (lower is better)
Translates to: IFWALNTIKAAV*CFFLMNFPESC
Trigger: GCAGGATTCAGGAAAATTCATCAGAAAGAAACAGCAGACTGCTGCTTTGATTGTGTTCAGTGCCCAGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000022438.12
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS GCA 72 bp CTTATCATATGGACACTTCACACACTGTTCCATATCTaGTGTTTCATTGGAAACCTCATTTTCTGGGCACTG +
Preference number: 6 (lower is better)
Translates to: LIIWTLHTLFHI*CFIGNLIFWAL
Trigger: CAGTGCCCAGAAAATGAGGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTGAAGTGTCCATATGATAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022438.12
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233920.2
CDS CCA 72 bp GACACTTCACACACTGTTCCATATCTGCTGTTTCATTaGAAACCTCATTTTCTGGGCACTGAACACAATCAA +
Preference number: 6 (lower is better)
Translates to: DTSHTVPYLLFH*KPHFLGTEHNQ
Trigger: TTGATTGTGTTCAGTGCCCAGAAAATGAGGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTGAAGTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022438.12
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233920.2
CDS CCA 72 bp GCAGTGGGTTTTCTCTATGTTGGCATACTTATCATATaGACACTTCACACACTGTTCCATATCTGCTGTTTC +
Preference number: 6 (lower is better)
Translates to: AVGFLYVGILII*TLHTLFHICCF
Trigger: GAAACAGCAGATATGGAACAGTGTGTGAAGTGTCCATATGATAAGTATGCCAACATAGAGAAAACCCACTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000022438.12
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233920.2
CDS CCA 72 bp ATGGACACTTCACACACTGTTCCATATCTGTTTCATTaGAAACCTCATTTTCTGGGCACTGAACACAATCAA +
Preference number: 6 (lower is better)
Translates to: MDTSHTVPYLFH*KPHFLGTEHNQ
Trigger: TTGATTGTGTTCAGTGCCCAGAAAATGAGGTTTCCAATGAAACAGATATGGAACAGTGTGTGAAGTGTCCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233848.2
CDS CAA 72 bp TGTCACAAATTCTTACCAGTGGCATTGAAGAATGCATaGCCAGTTTTAAGGATGTTTTCCATGATGGTCCTG +
Preference number: 6 (lower is better)
Translates to: CHKFLPVALKNA*PVLRMFSMMVL
Trigger: CAGGACCATCATGGAAAACATCCTTAAAACTGGCAATGCATTCTTCAATGCCACTGGTAAGAATTTGTGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000022438.12
CDS CCA 72 bp GCAGTGGGTTTTCTCTATGTTGGCATACTTATCATATaGACACTTCACACACTGTTCCATATCTGTTTCATT +
Preference number: 6 (lower is better)
Translates to: AVGFLYVGILII*TLHTLFHICFI
Trigger: AATGAAACAGATATGGAACAGTGTGTGAAGTGTCCATATGATAAGTATGCCAACATAGAGAAAACCCACTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000159674.4
ENSMUST00000232951.2
ENSMUST00000233848.2
CDS CAA 90 bp TGGTCATGTAGGTTAGGATTAAATGATCCAAAGAAAACCCATTCATaGTCACAAATTCTTACCAGTGGCATTGAAGAATGCATTGCCAGT +
Preference number: 6 (lower is better)
Translates to: WSCRLGLNDPKKTHS*SQILTSGIEECIAS
Trigger: ACTGGCAATGCATTCTTCAATGCCACTGGTAAGAATTTGTGACAATGAATGGGTTTTCTTTGGATCATTTAATCCTAACCTACATGACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022438.12
CDS TCA 72 bp CCAAACCTCTCAATAAATCATGACAGTTTCCACCAATaGTGGAGAACATCAAAGTTATGTTGGGTAAAAGAT +
Preference number: 6 (lower is better)
Translates to: PNLSINHDSFHQ*WRTSKLCWVKD
Trigger: ATCTTTTACCCAACATAACTTTGATGTTCTCCATCATTGGTGGAAACTGTCATGATTTATTGAGAGGTTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENSMUST00000022438.12
ENSMUST00000159674.4
ENSMUST00000163019.9
ENSMUST00000232797.2
ENSMUST00000232951.2
ENSMUST00000233126.2
ENSMUST00000233280.2
ENSMUST00000233394.2
ENSMUST00000233651.2
ENSMUST00000233766.2
ENSMUST00000233848.2
ENSMUST00000233920.2
CDS CAA 72 bp AGGTTAGGATTAAATGATCCAAAGAAAACCCATTCATaGTCACAAATTCTTACCAGTGGCATTGAAGAATGC +
Preference number: 6 (lower is better)
Translates to: RLGLNDPKKTHS*SQILTSGIEEC
Trigger: GCATTCTTCAATGCCACTGGTAAGAATTTGTGACAATGAATGGGTTTTCTTTGGATCATTTAATCCTAACCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000022438.12