Pregenerated sensors for VMN2R86 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000092162Ensembl transcript IDs: ENSMUST00000170257.4
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGACTCGCTGCCCTGCTCCTCGCCCTGCGCCTCTGCGTGGTCCTTaGGCACGGGCTGGCGCAAGGCCGACCTCCAACTCTCTCCGGAGG | + |
|
Preference number: 1 (lower is better) Translates to: WTRCPAPRPAPLRGP*ARAGARPTSNSLRR Trigger: CCTCCGGAGAGAGTTGGAGGTCGGCCTTGCGCCAGCCCGTGCCCAAGGACCACGCAGAGGCGCAGGGCGAGGAGCAGGGCAGCGAGTCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CCA 90 bp | CCCTGCTCCTCGCCCTGCGCCTCTGCGTGGTCCTTGGGCACGGGCTaGCGCAAGGCCGACCTCCAACTCTCTCCGGAGGTTTCTTGGGCT | + |
|
Preference number: 1 (lower is better) Translates to: PCSSPCASAWSLGTG*RKADLQLSPEVSWA Trigger: AGCCCAAGAAACCTCCGGAGAGAGTTGGAGGTCGGCCTTGCGCCAGCCCGTGCCCAAGGACCACGCAGAGGCGCAGGGCGAGGAGCAGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR GCA 90 bp | CCGCCGAGCAGGTTGCCCATTGAAGAGACAGCGGAGGGCGCGGGCTaGAGTAGCATGCTAGGGCCCGGGCATGGCCTCACTCTGCTCGCT | + |
|
Preference number: 1 (lower is better) Translates to: PPSRLPIEETAEGAG*SSMLGPGHGLTLLA Trigger: AGCGAGCAGAGTGAGGCCATGCCCGGGCCCTAGCATGCTACTGCAGCCCGCGCCCTCCGCTGTCTCTTCAATGGGCAACCTGCTCGGCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CCA 90 bp | GCATGGCCTCACTCTGCTCGCTCTGGGCACAGGCTGCTGCTCACCTaGCCCACACCTCACAGCTCAGCACAGCCTCAGGCGCTCAGGCCC | + |
|
Preference number: 1 (lower is better) Translates to: AWPHSARSGHRLLLT*PTPHSSAQPQALRP Trigger: GGGCCTGAGCGCCTGAGGCTGTGCTGAGCTGTGAGGTGTGGGCCAGGTGAGCAGCAGCCTGTGCCCAGAGCGAGCAGAGTGAGGCCATGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR GCA 90 bp | ATTTCCTTCAGTGGACTCGCTGCCCTGCTCCTCGCCCTGCGCCTCTaGGTGGTCCTTGGGCACGGGCTGGCGCAAGGCCGACCTCCAACT | + |
|
Preference number: 1 (lower is better) Translates to: ISFSGLAALLLALRL*VVLGHGLAQGRPPT Trigger: AGTTGGAGGTCGGCCTTGCGCCAGCCCGTGCCCAAGGACCACGCAGAGGCGCAGGGCGAGGAGCAGGGCAGCGAGTCCACTGAAGGAAAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR TCA 90 bp | GGCCAAGTGGAGTCCAGTCCTGCACAGTGGTGTGCTCGCGGAAGCTaGCCCCGCCGAGCAGGTTGCCCATTGAAGAGACAGCGGAGGGCG | + |
|
Preference number: 1 (lower is better) Translates to: GQVESSPAQWCARGS*PRRAGCPLKRQRRA Trigger: CGCCCTCCGCTGTCTCTTCAATGGGCAACCTGCTCGGCGGGGTCAGCTTCCGCGAGCACACCACTGTGCAGGACTGGACTCCACTTGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR GCA 90 bp | AAGCTTCTCTTTGGTTTAGCATTTCCTTCAGTGGACTCGCTGCCCTaGTCCTCGCCCTGCGCCTCTGCGTGGTCCTTGGGCACGGGCTGG | + |
|
Preference number: 1 (lower is better) Translates to: KLLFGLAFPSVDSLP*SSPCASAWSLGTGW Trigger: CCAGCCCGTGCCCAAGGACCACGCAGAGGCGCAGGGCGAGGAGCAGGGCAGCGAGTCCACTGAAGGAAATGCTAAACCAAAGAGAAGCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR TCA 90 bp | CCTGAGGAAATTTTGGAGTCCTTAGATTTCTTGTGTGTAGAAGTTTaGCCACTGGAGCCCGACGCAGGTAGAGTTGTGGTTTTCTGGGCT | + |
|
Preference number: 1 (lower is better) Translates to: PEEILESLDFLCVEV*PLEPDAGRVVVFWA Trigger: AGCCCAGAAAACCACAACTCTACCTGCGTCGGGCTCCAGTGGTCAAACTTCTACACACAAGAAATCTAAGGACTCCAAAATTTCCTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CCA 90 bp | TGGATGCAGGAACTCAGTCAAAGTCCATGGAAAAATGCTGATTACTaGCTTCATGTCCATCCTATCTACAGTCTTCTTTCATATACCTTC | + |
|
Preference number: 1 (lower is better) Translates to: WMQELSQSPWKNADY*LHVHPIYSLLSYTF Trigger: GAAGGTATATGAAAGAAGACTGTAGATAGGATGGACATGAAGCCAGTAATCAGCATTTTTCCATGGACTTTGACTGAGTTCCTGCATCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR TCA 90 bp | TATAAAAGCGAAGGTAACTCGAGTCCTTTTGATATCGGATATCTTTaGAGTTTGGGTACTTATGTCCTTGTACAGATCTCTCGCCACATA | + |
|
Preference number: 1 (lower is better) Translates to: YKSEGNSSPFDIGYL*SLGTYVLVQISRHI Trigger: TATGTGGCGAGAGATCTGTACAAGGACATAAGTACCCAAACTTCAAAGATATCCGATATCAAAAGGACTCGAGTTACCTTCGCTTTTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR TCA 90 bp | ACACAGTCAGTGAATTTGTTGATGTCAGGCAACCATTCTATCAACTaGGCTATACCACAGCCAAGTTTTTCTTCTGTGGTAATATCTAAC | + |
|
Preference number: 1 (lower is better) Translates to: TQSVNLLMSGNHSIN*AIPQPSFSSVVISN Trigger: GTTAGATATTACCACAGAAGAAAAACTTGGCTGTGGTATAGCTCAGTTGATAGAATGGTTGCCTGACATCAACAAATTCACTGACTGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR TCA 90 bp | GTGTTTTCACTTAAAGTTCAAGAGCCTTATACAGCAGGCACAATCTaGACCTCGTACTCTTTTACATATACTATACTCTTAGAAGTATGT | + |
|
Preference number: 1 (lower is better) Translates to: VFSLKVQEPYTAGTI*TSYSFTYTILLEVC Trigger: ACATACTTCTAAGAGTATAGTATATGTAAAAGAGTACGAGGTTCAGATTGTGCCTGCTGTATAAGGCTCTTGAACTTTAAGTGAAAACAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CAA 90 bp | TCCTGCACAGTGGTGTGCTCGCGGAAGCTGACCCCGCCGAGCAGGTaGCCCATTGAAGAGACAGCGGAGGGCGCGGGCTGCAGTAGCATG | + |
|
Preference number: 2 (lower is better) Translates to: SCTVVCSRKLTPPSR*PIEETAEGAGCSSM Trigger: CATGCTACTGCAGCCCGCGCCCTCCGCTGTCTCTTCAATGGGCAACCTGCTCGGCGGGGTCAGCTTCCGCGAGCACACCACTGTGCAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR TCA 90 bp | ACTGCCAGGCTCTGGACTCCCTTGTCCACCTCCTCCCCAAGCACTCTGGATGCCGAGCAGGTTGCCCATTaGAGAGACAGCGGAGGGCGC | + |
|
Preference number: 2 (lower is better) Translates to: TARLWTPLSTSSPSTLDAEQVAH*RDSGGR Trigger: GCGCCCTCCGCTGTCTCTTCAATGGGCAACCTGCTC...GGCATCCAGAGTGCTTGGGGAGGAGGTGGACAAGGGAGTCCAGAGCCTGGCAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR GCA 90 bp | AGCCCGACGCAGGTAGAGTTGTGGTTTTCTGGGCTTTGCATCGCTCTGGCTGTTCTGGGCACAGGCTGCTaGTCACCTGGCCCACACCTC | + |
|
Preference number: 2 (lower is better) Translates to: SPTQVELWFSGLCIALAVLGTGC*SPGPHL Trigger: GAGGTGTGGGCCAGGTGAGCAGCAGCCTGTGCCCAG...AACAGCCAGAGCGATGCAAAGCCCAGAAAACCACAACTCTACCTGCGTCGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR GCA 90 bp | AAAGCTGTACTGCAGAAGGATCCCAGTGGCCTGCGTGCGTTTTGCTGGCGAGACTCCTGCACAGTGGTGTaGTCGCGGAAGCTGACCCCG | + |
|
Preference number: 2 (lower is better) Translates to: KAVLQKDPSGLRAFCWRDSCTVV*SRKLTP Trigger: CGGGGTCAGCTTCCGCGAGCACACCACTGTGCAGGA...GTCTCGCCAGCAAAACGCACGCAGGCCACTGGGATCCTTCTGCAGTACAGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CCA 90 bp | AAAGCTGTACTGCAGAAGGATCCCAGTGGCCTGCGTGCGTTTTGCTGGCGAGACTTCACTGCCAGGCTCTaGACTCCCTTGTCCACCTCC | + |
|
Preference number: 2 (lower is better) Translates to: KAVLQKDPSGLRAFCWRDFTARL*TPLSTS Trigger: GGAGGTGGACAAGGGAGTCCAGAGCCTGGCAGTGAA...GTCTCGCCAGCAAAACGCACGCAGGCCACTGGGATCCTTCTGCAGTACAGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR GCA 90 bp | GCTTCCTTCTTCCAAGTGTTGAGATTACAGACTTTCTCCATCACACACAGTCAGGCGGAGGGCGCGGGCTaGAGTAGCATGCTAGGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: ASFFQVLRLQTFSITHSQAEGAG*SSMLGP Trigger: GGGCCCTAGCATGCTACTGCAGCCCGCGCCCTCCGC...CTGACTGTGTGTGATGGAGAAAGTCTGTAATCTCAACACTTGGAAGAAGGAAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR TCA 90 bp | AAAGCTGTACTGCAGAAGGATCCCAGTGGCCTGCGTGCGTTTTGCTGGCGAGACGCCACTACCTCAGGATaGCATCCTGCATTTTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KAVLQKDPSGLRAFCWRDATTSG*HPAFSG Trigger: TCCTGAAAATGCAGGATGTCATCCTGAGGTAGTGGC...GTCTCGCCAGCAAAACGCACGCAGGCCACTGGGATCCTTCTGCAGTACAGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CCA 90 bp | GCTTCCTTCTTCCAAGTGTTGAGATTACAGACTTTCTCCATCACACACAGTCAGTCCTTGGGCACGGGCTaGCGCAAGGCCGACCTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: ASFFQVLRLQTFSITHSQSLGTG*RKADLQ Trigger: TTGGAGGTCGGCCTTGCGCCAGCCCGTGCCCAAGGA...CTGACTGTGTGTGATGGAGAAAGTCTGTAATCTCAACACTTGGAAGAAGGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CAA 90 bp | GTGGAGAATCGGATTGGTCAGCAGCACTGTCTTTCTCTGTGTTTTTaGGCTTGGGATCTTCACTGCCAGGCTCTGGACTCCCTTGTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: VENRIGQQHCLSLCF*AWDLHCQALDSLVH Trigger: GTGGACAAGGGAGTCCAGAGCCTGGCAGTGAAGATCCCAAGCCAAAAAACACAGAGAAAGACAGTGCTGCTGACCAATCCGATTCTCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CCA 90 bp | ACTGCCAGGCTCTGGACTCCCTTGTCCACCTCCTCCCCAAGCACTCTGGATGCCTGTGCTGAGACCATCTaGCTTAAATGGAATTTTGTT | + |
|
Preference number: 2 (lower is better) Translates to: TARLWTPLSTSSPSTLDACAETI*LKWNFV Trigger: AACAAAATTCCATTTAAGCCAGATGGTCTCAGCACA...GGCATCCAGAGTGCTTGGGGAGGAGGTGGACAAGGGAGTCCAGAGCCTGGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTGAGGAAGTTGGCTGGGAATACAAATATTCTAGAAAGGGAATGGGTAGACGCTCTGGGCACAGGCTaGTGCTCACCTGGCCCACAC | + |
|
Preference number: 2 (lower is better) Translates to: SLRKLAGNTNILEREWVDALGTG*CSPGPH Trigger: GTGTGGGCCAGGTGAGCAGCAGCCTGTGCCCAGAGC...GTCTACCCATTCCCTTTCTAGAATATTTGTATTCCCAGCCAACTTCCTCAAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR GCA 90 bp | AAAGCTGTACTGCAGAAGGATCCCAGTGGCCTGCGTGCGTTTTGCTGGCGAGACTGTGAAATTTTGCTGTaGCACTACCTCAGGATGACA | + |
|
Preference number: 2 (lower is better) Translates to: KAVLQKDPSGLRAFCWRDCEILL*HYLRMT Trigger: TGTCATCCTGAGGTAGTGGCACAGCAAAATTTCACA...GTCTCGCCAGCAAAACGCACGCAGGCCACTGGGATCCTTCTGCAGTACAGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR GCA 90 bp | AAAGCTGTACTGCAGAAGGATCCCAGTGGCCTGCGTGCGTTTTGCTGGCGAGACGGTTTTGTGAAATTTTaGTGTGCCACTACCTCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KAVLQKDPSGLRAFCWRDGFVKF*CATTSG Trigger: TCCTGAGGTAGTGGCACAGCAAAATTTCACAAAACC...GTCTCGCCAGCAAAACGCACGCAGGCCACTGGGATCCTTCTGCAGTACAGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CCA 90 bp | ACTGCCAGGCTCTGGACTCCCTTGTCCACCTCCTCCCCAAGCACTCTGGATGCCATAGAAGCTTCTCTTTaGTTTAGCATTTCCTTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: TARLWTPLSTSSPSTLDAIEASL*FSISFS Trigger: ACTGAAGGAAATGCTAAACCAAAGAGAAGCTTCTAT...GGCATCCAGAGTGCTTGGGGAGGAGGTGGACAAGGGAGTCCAGAGCCTGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR GCA 90 bp | AAAGCTGTACTGCAGAAGGATCCCAGTGGCCTGCGTGCGTTTTGCTGGCGAGACCTCAGGATGACATCCTaGATTTTCAGGATTTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: KAVLQKDPSGLRAFCWRDLRMTS*IFRIFR Trigger: TCTGAAAATCCTGAAAATGCAGGATGTCATCCTGAG...GTCTCGCCAGCAAAACGCACGCAGGCCACTGGGATCCTTCTGCAGTACAGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR TCA 90 bp | AGCCCGACGCAGGTAGAGTTGTGGTTTTCTGGGCTTTGCATCGCTCTGGCTGTTGTTCACAAACTTCACTaGCCTAAATGTGATATAGGT | + |
|
Preference number: 2 (lower is better) Translates to: SPTQVELWFSGLCIALAVVHKLH*PKCDIG Trigger: ACCTATATCACATTTAGGTCAGTGAAGTTTGTGAAC...AACAGCCAGAGCGATGCAAAGCCCAGAAAACCACAACTCTACCTGCGTCGGGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CCA 90 bp | AAAGCTGTACTGCAGAAGGATCCCAGTGGCCTGCGTGCGTTTTGCTGGCGAGACTTTCTCTATGTACCTTaGTCACAGTTAACTGAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: KAVLQKDPSGLRAFCWRDFLYVP*SQLTER Trigger: TCTTTCAGTTAACTGTGACCAAGGTACATAGAGAAA...GTCTCGCCAGCAAAACGCACGCAGGCCACTGGGATCCTTCTGCAGTACAGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTGAGGAAGTTGGCTGGGAATACAAATATTCTAGAAAGGGAATGGGTAGACTTGTGTGTAGAAGTTTaGCCACTGGAGCCCGACGCA | + |
|
Preference number: 2 (lower is better) Translates to: SLRKLAGNTNILEREWVDLCVEV*PLEPDA Trigger: TGCGTCGGGCTCCAGTGGTCAAACTTCTACACACAA...GTCTACCCATTCCCTTTCTAGAATATTTGTATTCCCAGCCAACTTCCTCAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CAA 90 bp | TGGCTAATACATTGGGGTCTTGATGCAGCTCAGAACGTTTCCATGTaGTTATTCGCACAAGGTTCTTGTCTCTCTCTACCTCCTAATTTG | + |
|
Preference number: 2 (lower is better) Translates to: WLIHWGLDAAQNVSM*LFAQGSCLSLPPNL Trigger: CAAATTAGGAGGTAGAGAGAGACAAGAACCTTGTGCGAATAACAACATGGAAACGTTCTGAGCTGCATCAAGACCCCAATGTATTAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTGAGGAAGTTGGCTGGGAATACAAATATTCTAGAAAGGGAATGGGTAGACATTTTTCCAACATCCTaGACCTCTGTGATGGCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: SLRKLAGNTNILEREWVDIFPTS*TSVMAL Trigger: GAGGGCCATCACAGAGGTCCAGGATGTTGGAAAAAT...GTCTACCCATTCCCTTTCTAGAATATTTGTATTCCCAGCCAACTTCCTCAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTGAGGAAGTTGGCTGGGAATACAAATATTCTAGAAAGGGAATGGGTAGACACGCAGGTAGAGTTGTaGTTTTCTGGGCTTTGCATC | + |
|
Preference number: 2 (lower is better) Translates to: SLRKLAGNTNILEREWVDTQVEL*FSGLCI Trigger: GATGCAAAGCCCAGAAAACCACAACTCTACCTGCGT...GTCTACCCATTCCCTTTCTAGAATATTTGTATTCCCAGCCAACTTCCTCAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CCA 90 bp | CCTATACAGTCATTTACAGAAAACTGTAAATATGGGAATGGGACAGGTTGTCATGGGTTTTCTGCTCTCTaGGTCTCCTCTCCTGAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: PIQSFTENCKYGNGTGCHGFSAL*VSSPEA Trigger: AGCTTCAGGAGAGGAGACCCAGAGAGCAGAAAACCC...ATGACAACCTGTCCCATTCCCATATTTACAGTTTTCTGTAAATGACTGTATAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTGAGGAAGTTGGCTGGGAATACAAATATTCTAGAAAGGGAATGGGTAGACACAGCAGGCACAATCTaGACCTCGTACTCTTTTACA | + |
|
Preference number: 2 (lower is better) Translates to: SLRKLAGNTNILEREWVDTAGTI*TSYSFT Trigger: TGTAAAAGAGTACGAGGTTCAGATTGTGCCTGCTGT...GTCTACCCATTCCCTTTCTAGAATATTTGTATTCCCAGCCAACTTCCTCAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CCA 90 bp | GCTTCCTTCTTCCAAGTGTTGAGATTACAGACTTTCTCCATCACACACAGTCAGGATGAAATTCTCTTATaGTGTGTAATGTTTCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: ASFFQVLRLQTFSITHSQDEILL*CVMFLG Trigger: GCCCAGAAACATTACACACCATAAGAGAATTTCATC...CTGACTGTGTGTGATGGAGAAAGTCTGTAATCTCAACACTTGGAAGAAGGAAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR TCA 90 bp | AGTTTGAGGAAGTTGGCTGGGAATACAAATATTCTAGAAAGGGAATGGGTAGACACCGATTTTCCTCACTaGATGAAACGTTTACATCTC | + |
|
Preference number: 2 (lower is better) Translates to: SLRKLAGNTNILEREWVDTDFPH*MKRLHL Trigger: GAGATGTAAACGTTTCATTCAGTGAGGAAAATCGGT...GTCTACCCATTCCCTTTCTAGAATATTTGTATTCCCAGCCAACTTCCTCAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CAA 90 bp | CAGAAATATGAAGAAGATGGTGGGAAAGATCTTGAGAGTCAAAGTTaGAGGAAGTTGGCTGGGAATACAAATATTCTAGAAAGGGAATGG | + |
|
Preference number: 2 (lower is better) Translates to: QKYEEDGGKDLESQS*RKLAGNTNILEREW Trigger: CCATTCCCTTTCTAGAATATTTGTATTCCCAGCCAACTTCCTCAAACTTTGACTCTCAAGATCTTTCCCACCATCTTCTTCATATTTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CCA 90 bp | AGTTTGAGGAAGTTGGCTGGGAATACAAATATTCTAGAAAGGGAATGGGTAGACACCAGAACTGGATTGTaGTTTTGTGAAATTTTGCTG | + |
|
Preference number: 2 (lower is better) Translates to: SLRKLAGNTNILEREWVDTRTGL*FCEILL Trigger: CAGCAAAATTTCACAAAACCACAATCCAGTTCTGGT...GTCTACCCATTCCCTTTCTAGAATATTTGTATTCCCAGCCAACTTCCTCAAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CAA 90 bp | TTACACACAAAACCACAGGTGAAAATGATGGTAGCCATTCCTCAATaGAGATTCCTGGATCTCAACATGTTCAGGTTTGTGTACTTATTA | + |
|
Preference number: 2 (lower is better) Translates to: LHTKPQVKMMVAIPQ*RFLDLNMFRFVYLL Trigger: TAATAAGTACACAAACCTGAACATGTTGAGATCCAGGAATCTCAATTGAGGAATGGCTACCATCATTTTCACCTGTGGTTTTGTGTGTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR TCA 90 bp | CCTATACAGTCATTTACAGAAAACTGTAAATATGGGAATGGGACAGGTTGTCATGATATCGGATATCTTTaGAGTTTGGGTACTTATGTC | + |
|
Preference number: 2 (lower is better) Translates to: PIQSFTENCKYGNGTGCHDIGYL*SLGTYV Trigger: GACATAAGTACCCAAACTTCAAAGATATCCGATATC...ATGACAACCTGTCCCATTCCCATATTTACAGTTTTCTGTAAATGACTGTATAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CAA 90 bp | TCCTATCTACAGTCTTCTTTCATATACCTTCTAGAACAACTTGCTTaGAGTTACTACTGTCTACAGTTAGTAGGGCCACCATATATTAAT | + |
|
Preference number: 2 (lower is better) Translates to: SYLQSSFIYLLEQLA*SYYCLQLVGPPYIN Trigger: ATTAATATATGGTGGCCCTACTAACTGTAGACAGTAGTAACTCAAAGCAAGTTGTTCTAGAAGGTATATGAAAGAAGACTGTAGATAGGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR GCA 90 bp | CCTATACAGTCATTTACAGAAAACTGTAAATATGGGAATGGGACAGGTTGTCATGATATAAGGGTCATGTaGATTTTAGAAGTTCATGGT | + |
|
Preference number: 2 (lower is better) Translates to: PIQSFTENCKYGNGTGCHDIRVM*ILEVHG Trigger: ACCATGAACTTCTAAAATGCACATGACCCTTATATC...ATGACAACCTGTCCCATTCCCATATTTACAGTTTTCTGTAAATGACTGTATAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CCA 90 bp | CCTATACAGTCATTTACAGAAAACTGTAAATATGGGAATGGGACAGGTTGTCATCATTTTAGAAGTTCATaGTCACAAATGATGTGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: PIQSFTENCKYGNGTGCHHFRSS*SQMMCW Trigger: CCAACACATCATTTGTGACCATGAACTTCTAAAATG...ATGACAACCTGTCCCATTCCCATATTTACAGTTTTCTGTAAATGACTGTATAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CCA 72 bp | GACTCGCTGCCCTGCTCCTCGCCCTGCGCCTCTGCGTaGTCCTTGGGCACGGGCTGGCGCAAGGCCGACCTC | + |
|
Preference number: 3 (lower is better) Translates to: DSLPCSSPCASA*SLGTGWRKADL Trigger: GAGGTCGGCCTTGCGCCAGCCCGTGCCCAAGGACCACGCAGAGGCGCAGGGCGAGGAGCAGGGCAGCGAGTC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR GCA 72 bp | AGTGGACTCGCTGCCCTGCTCCTCGCCCTGCGCCTCTaGGTGGTCCTTGGGCACGGGCTGGCGCAAGGCCGA | + |
|
Preference number: 3 (lower is better) Translates to: SGLAALLLALRL*VVLGHGLAQGR Trigger: TCGGCCTTGCGCCAGCCCGTGCCCAAGGACCACGCAGAGGCGCAGGGCGAGGAGCAGGGCAGCGAGTCCACT 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR GCA 72 bp | GGTAGGCCAAGTGGAGTCCAGTCCTGCACAGTGGTGTaGTCGCGGAAGCTGACCCCGCCGAGCAGGTTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: GRPSGVQSCTVV*SRKLTPPSRLP Trigger: GGGCAACCTGCTCGGCGGGGTCAGCTTCCGCGAGCACACCACTGTGCAGGACTGGACTCCACTTGGCCTACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR GCA 72 bp | AGGTTGCCCATTGAAGAGACAGCGGAGGGCGCGGGCTaGAGTAGCATGCTAGGGCCCGGGCATGGCCTCACT | + |
|
Preference number: 3 (lower is better) Translates to: RLPIEETAEGAG*SSMLGPGHGLT Trigger: AGTGAGGCCATGCCCGGGCCCTAGCATGCTACTGCAGCCCGCGCCCTCCGCTGTCTCTTCAATGGGCAACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR TCA 72 bp | GAGTCCAGTCCTGCACAGTGGTGTGCTCGCGGAAGCTaGCCCCGCCGAGCAGGTTGCCCATTGAAGAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: ESSPAQWCARGS*PRRAGCPLKRQ Trigger: CTGTCTCTTCAATGGGCAACCTGCTCGGCGGGGTCAGCTTCCGCGAGCACACCACTGTGCAGGACTGGACTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR GCA 72 bp | TTTGGTTTAGCATTTCCTTCAGTGGACTCGCTGCCCTaGTCCTCGCCCTGCGCCTCTGCGTGGTCCTTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: FGLAFPSVDSLP*SSPCASAWSLG Trigger: GCCCAAGGACCACGCAGAGGCGCAGGGCGAGGAGCAGGGCAGCGAGTCCACTGAAGGAAATGCTAAACCAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CCA 72 bp | CTGCAGAAGGATCCCAGTGGCCTGCGTGCGTTTTGCTaGCGAGACAGTAGCGTGGGTCAGTCCACCTCATTG | + |
|
Preference number: 3 (lower is better) Translates to: LQKDPSGLRAFC*RDSSVGQSTSL Trigger: CAATGAGGTGGACTGACCCACGCTACTGTCTCGCCAGCAAAACGCACGCAGGCCACTGGGATCCTTCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CCA 72 bp | CCACTGGAGCCCGACGCAGGTAGAGTTGTGGTTTTCTaGGCTTTGCATCGCTCTGGCTGTTCTTTCTTAGGT | + |
|
Preference number: 3 (lower is better) Translates to: PLEPDAGRVVVF*ALHRSGCSFLG Trigger: ACCTAAGAAAGAACAGCCAGAGCGATGCAAAGCCCAGAAAACCACAACTCTACCTGCGTCGGGCTCCAGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CAA 90 bp | ACTGCCAGGCTCTGGACTCCCTTGTCCACCTCCTCCCCAAGCACTCTGGATGCCCTAGAACAACTTGCTTaGAGTTACTACTGTCTACAG | + |
|
Preference number: 3 (lower is better) Translates to: TARLWTPLSTSSPSTLDALEQLA*SYYCLQ Trigger: CTGTAGACAGTAGTAACTCAAAGCAAGTTGTTCTAG...GGCATCCAGAGTGCTTGGGGAGGAGGTGGACAAGGGAGTCCAGAGCCTGGCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CCA 72 bp | AAGTTTGACCACTGGAGCCCGACGCAGGTAGAGTTGTaGTTTTCTGGGCTTTGCATCGCTCTGGCTGTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: KFDHWSPTQVEL*FSGLCIALAVL Trigger: AAGAACAGCCAGAGCGATGCAAAGCCCAGAAAACCACAACTCTACCTGCGTCGGGCTCCAGTGGTCAAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTGAGGAAGTTGGCTGGGAATACAAATATTCTAGAAAGGGAATGGGTAGACCTCTCCGGAGGTTTCTaGGGCTGCTCGGGCTCCGGC | + |
|
Preference number: 3 (lower is better) Translates to: SLRKLAGNTNILEREWVDLSGGF*GCSGSG Trigger: GCCGGAGCCCGAGCAGCCCAAGAAACCTCCGGAGAG...GTCTACCCATTCCCTTTCTAGAATATTTGTATTCCCAGCCAACTTCCTCAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCCTTCTTCCAAGTGTTGAGATTACAGACTTTCTCCATCACACACAGTCAGAGGCTCTGGACTCCCTaGTCCACCTCCTCCCCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: ASFFQVLRLQTFSITHSQRLWTP*STSSPS Trigger: GCTTGGGGAGGAGGTGGACAAGGGAGTCCAGAGCCT...CTGACTGTGTGTGATGGAGAAAGTCTGTAATCTCAACACTTGGAAGAAGGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTGAGGAAGTTGGCTGGGAATACAAATATTCTAGAAAGGGAATGGGTAGACCGAGCAGGTTGCCCATaGAAGAGACAGCGGAGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: SLRKLAGNTNILEREWVDRAGCP*KRQRRA Trigger: CGCCCTCCGCTGTCTCTTCAATGGGCAACCTGCTCG...GTCTACCCATTCCCTTTCTAGAATATTTGTATTCCCAGCCAACTTCCTCAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTGAGGAAGTTGGCTGGGAATACAAATATTCTAGAAAGGGAATGGGTAGACACCCCGCCGAGCAGGTaGCCCATTGAAGAGACAGCG | + |
|
Preference number: 3 (lower is better) Translates to: SLRKLAGNTNILEREWVDTPPSR*PIEETA Trigger: CGCTGTCTCTTCAATGGGCAACCTGCTCGGCGGGGT...GTCTACCCATTCCCTTTCTAGAATATTTGTATTCCCAGCCAACTTCCTCAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCCTTCTTCCAAGTGTTGAGATTACAGACTTTCTCCATCACACACAGTCAGCCGACGCAGGTAGAGTaGTGGTTTTCTGGGCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: ASFFQVLRLQTFSITHSQPTQVE*WFSGLC Trigger: GCAAAGCCCAGAAAACCACAACTCTACCTGCGTCGG...CTGACTGTGTGTGATGGAGAAAGTCTGTAATCTCAACACTTGGAAGAAGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CCA 72 bp | CTTGTACAGATCTCTCGCCACATAGAAGCTTCTCTTTaGTTTAGCATTTCCTTCAGTGGACTCGCTGCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVQISRHIEASL*FSISFSGLAAL Trigger: CAGGGCAGCGAGTCCACTGAAGGAAATGCTAAACCAAAGAGAAGCTTCTATGTGGCGAGAGATCTGTACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR TCA 72 bp | CTGGGCTTTGCATCGCTCTGGCTGTTCTTTCTTAGGTaGCCCCAAGATGAAATTCTCTTATGGTGTGTAATG | + |
|
Preference number: 3 (lower is better) Translates to: LGFASLWLFFLR*PQDEILLWCVM Trigger: CATTACACACCATAAGAGAATTTCATCTTGGGGTCACCTAAGAAAGAACAGCCAGAGCGATGCAAAGCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR TCA 72 bp | ATTTTGGAGTCCTTAGATTTCTTGTGTGTAGAAGTTTaGCCACTGGAGCCCGACGCAGGTAGAGTTGTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: ILESLDFLCVEV*PLEPDAGRVVV Trigger: AACCACAACTCTACCTGCGTCGGGCTCCAGTGGTCAAACTTCTACACACAAGAAATCTAAGGACTCCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR TCA 72 bp | GAAATGTTGGGAGCCATTAAGACAACACAATTGTCCTaGTCTCTGAATTGGGCCTCTACCCCCGAGAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: EMLGAIKTTQLS*SLNWASTPEKK Trigger: TTTCTTCTCGGGGGTAGAGGCCCAATTCAGAGATCAGGACAATTGTGTTGTCTTAATGGCTCCCAACATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCCTTCTTCCAAGTGTTGAGATTACAGACTTTCTCCATCACACACAGTCAGGCTCCTGAGGAAATTTaGGAGTCCTTAGATTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: ASFFQVLRLQTFSITHSQAPEEI*ESLDFL Trigger: CAAGAAATCTAAGGACTCCAAAATTTCCTCAGGAGC...CTGACTGTGTGTGATGGAGAAAGTCTGTAATCTCAACACTTGGAAGAAGGAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR TCA 72 bp | GATGCAGGAACTCAGTCAAAGTCCATGGAAAAATGCTaGTTACTGGCTTCATGTCCATCCTATCTACAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: DAGTQSKSMEKC*LLASCPSYLQS Trigger: AGACTGTAGATAGGATGGACATGAAGCCAGTAATCAGCATTTTTCCATGGACTTTGACTGAGTTCCTGCATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CAA 90 bp | AGTTTGAGGAAGTTGGCTGGGAATACAAATATTCTAGAAAGGGAATGGGTAGACGTAGCCATTCCTCAATaGAGATTCCTGGATCTCAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLRKLAGNTNILEREWVDVAIPQ*RFLDLN Trigger: GTTGAGATCCAGGAATCTCAATTGAGGAATGGCTAC...GTCTACCCATTCCCTTTCTAGAATATTTGTATTCCCAGCCAACTTCCTCAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR TCA 72 bp | GAACATGGTAAATTTTTCCAACATCCTGGACCTCTGTaGTGGCCCTCAACAATATGCAATGCTGTAACTAAG | + |
|
Preference number: 3 (lower is better) Translates to: EHGKFFQHPGPL*WPSTICNAVTK Trigger: CTTAGTTACAGCATTGCATATTGTTGAGGGCCATCACAGAGGTCCAGGATGTTGGAAAAATTTACCATGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CCA 72 bp | ACAAGAAAATGGATGCAGGAACTCAGTCAAAGTCCATaGAAAAATGCTGATTACTGGCTTCATGTCCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: TRKWMQELSQSP*KNADYWLHVHP Trigger: AGGATGGACATGAAGCCAGTAATCAGCATTTTTCCATGGACTTTGACTGAGTTCCTGCATCCATTTTCTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CCA 72 bp | ACTCGAGTCCTTTTGATATCGGATATCTTTGAAGTTTaGGTACTTATGTCCTTGTACAGATCTCTCGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: TRVLLISDIFEV*VLMSLYRSLAT Trigger: TGTGGCGAGAGATCTGTACAAGGACATAAGTACCCAAACTTCAAAGATATCCGATATCAAAAGGACTCGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR-3UTR CAA 90 bp | GCTTCCTTCTTCCAAGTGTTGAGATTACAGACTTTCTCCATCACACACAGTCAGTTTGAAGAGATCAGCTaGCCTTTTTACTTGCTAACT | + |
|
Preference number: 3 (lower is better) Translates to: ASFFQVLRLQTFSITHSQFEEIS*PFYLLT Trigger: AGTTAGCAAGTAAAAAGGCAAGCTGATCTCTTCAAA...CTGACTGTGTGTGATGGAGAAAGTCTGTAATCTCAACACTTGGAAGAAGGAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR TCA 72 bp | AGTGTTATTTCTCTATGTACCTTGGTCACAGTTAACTaGAAGACGCCAAGACAAGAAAATGGATGCAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SVISLCTLVTVN*KTPRQENGCRN Trigger: GTTCCTGCATCCATTTTCTTGTCTTGGCGTCTTTCAGTTAACTGTGACCAAGGTACATAGAGAAATAACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR TCA 72 bp | GTGAATTTGTTGATGTCAGGCAACCATTCTATCAACTaGGCTATACCACAGCCAAGTTTTTCTTCTGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: VNLLMSGNHSIN*AIPQPSFSSVV Trigger: TACCACAGAAGAAAAACTTGGCTGTGGTATAGCTCAGTTGATAGAATGGTTGCCTGACATCAACAAATTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CCA 72 bp | GAACTCAGTCAAAGTCCATGGAAAAATGCTGATTACTaGCTTCATGTCCATCCTATCTACAGTCTTCTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: ELSQSPWKNADY*LHVHPIYSLLS Trigger: TGAAAGAAGACTGTAGATAGGATGGACATGAAGCCAGTAATCAGCATTTTTCCATGGACTTTGACTGAGTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR TCA 72 bp | GAAGGTAACTCGAGTCCTTTTGATATCGGATATCTTTaGAGTTTGGGTACTTATGTCCTTGTACAGATCTCT | + |
|
Preference number: 3 (lower is better) Translates to: EGNSSPFDIGYL*SLGTYVLVQIS Trigger: AGAGATCTGTACAAGGACATAAGTACCCAAACTTCAAAGATATCCGATATCAAAAGGACTCGAGTTACCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CCA 72 bp | GGGATATATGGGAAAGTGTTATTTCTCTATGTACCTTaGTCACAGTTAACTGAAAGACGCCAAGACAAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GIYGKVLFLYVP*SQLTERRQDKK Trigger: TTTCTTGTCTTGGCGTCTTTCAGTTAACTGTGACCAAGGTACATAGAGAAATAACACTTTCCCATATATCCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CCA 72 bp | GCAAAATATTTCCTCATCCAAGTTACACAGAAATGTTaGGAGCCATTAAGACAACACAATTGTCCTGATCTC | + |
|
Preference number: 3 (lower is better) Translates to: AKYFLIQVTQKC*EPLRQHNCPDL Trigger: GAGATCAGGACAATTGTGTTGTCTTAATGGCTCCCAACATTTCTGTGTAACTTGGATGAGGAAATATTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR TCA 72 bp | GAAAGGGAATGGGTAGACCAAAATGTCTTACGAATATaGCTCAAATGTACAATCAGAGGAAGGATCACTATA | + |
|
Preference number: 3 (lower is better) Translates to: EREWVDQNVLRI*LKCTIRGRITI Trigger: TATAGTGATCCTTCCTCTGATTGTACATTTGAGTCATATTCGTAAGACATTTTGGTCTACCCATTCCCTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR GCA 72 bp | CTCAAATGTACAATCAGAGGAAGGATCACTATACTATaGATACTATTATGGAAGGAAGAATGGTTGCAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LKCTIRGRITIL*ILLWKEEWLQS Trigger: GCTTTGCAACCATTCTTCCTTCCATAATAGTATGCATAGTATAGTGATCCTTCCTCTGATTGTACATTTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR TCA 72 bp | CTTAAAGTTCAAGAGCCTTATACAGCAGGCACAATCTaGACCTCGTACTCTTTTACATATACTATACTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LKVQEPYTAGTI*TSYSFTYTILL Trigger: TAAGAGTATAGTATATGTAAAAGAGTACGAGGTTCAGATTGTGCCTGCTGTATAAGGCTCTTGAACTTTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR TCA 72 bp | TTACTCTGTAAAAGAATGACACTGTTCTTCAACAACTaGTATGCTGAACTAGTAATGTGTATGTGGGGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: LLCKRMTLFFNN*YAELVMCMWGF Trigger: AAAACCCCACATACACATTACTAGTTCAGCATATCAGTTGTTGAAGAACAGTGTCATTCTTTTACAGAGTAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR GCA 72 bp | CTATACTATGCATACTATTATGGAAGGAAGAATGGTTaGAAAGCTTCTAGCCTATACAGTCATTTACAGAAA | + |
|
Preference number: 3 (lower is better) Translates to: LYYAYYYGRKNG*KASSLYSHLQK Trigger: TTTCTGTAAATGACTGTATAGGCTAGAAGCTTTGCAACCATTCTTCCTTCCATAATAGTATGCATAGTATAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CCA 72 bp | TTCTTAAATAGTTGTGCTGAGACCATCTGGCTTAAATaGAATTTTGTTCTTATAAAAGCGAAGGTAACTCGA | + |
|
Preference number: 3 (lower is better) Translates to: FLNSCAETIWLK*NFVLIKAKVTR Trigger: TCGAGTTACCTTCGCTTTTATAAGAACAAAATTCCATTTAAGCCAGATGGTCTCAGCACAACTATTTAAGAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CAA 72 bp | GTGGTGTGCTCGCGGAAGCTGACCCCGCCGAGCAGGTaGCCCATTGAAGAGACAGCGGAGGGCGCGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VVCSRKLTPPSR*PIEETAEGAGC Trigger: GCAGCCCGCGCCCTCCGCTGTCTCTTCAATGGGCAACCTGCTCGGCGGGGTCAGCTTCCGCGAGCACACCAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CAA 72 bp | GCGCAAGGCCGACCTCCAACTCTCTCCGGAGGTTTCTaGGGCTGCTCGGGCTCCGGCTCTAAATCGGTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AQGRPPTLSGGF*GCSGSGSKSVG Trigger: GCCTACCGATTTAGAGCCGGAGCCCGAGCAGCCCAAGAAACCTCCGGAGAGAGTTGGAGGTCGGCCTTGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR TCA 90 bp | ACTGCCAGGCTCTGGACTCCCTTGTCCACCTCCTCCCCAAGCACTCTGGATGCCCCTCCACAACCACCATaGCCTTCCCCCTGGTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TARLWTPLSTSSPSTLDAPPQPP*PSPWCC Trigger: ACAGCACCAGGGGGAAGGTCATGGTGGTTGTGGAGG...GGCATCCAGAGTGCTTGGGGAGGAGGTGGACAAGGGAGTCCAGAGCCTGGCAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CAA 72 bp | TGGCTTGGGATCTTCACTGCCAGGCTCTGGACTCCCTaGTCCACCTCCTCCCCAAGCACTCTGGATGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: WLGIFTARLWTP*STSSPSTLDAP Trigger: TGGGGCATCCAGAGTGCTTGGGGAGGAGGTGGACAAGGGAGTCCAGAGCCTGGCAGTGAAGATCCCAAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR CCA 90 bp | CTGACCCCGCCGAGCAGGTTGCCCATTGAAGAGACAGCGGAGGGCGCGGGCTGCATGTCACACTGCAAATaGAGGAGGGTACTGATGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LTPPSRLPIEETAEGAGCMSHCK*RRVLMF Trigger: GAACATCAGTACCCTCCTCCATTTGCAGTGTGACAT...GCAGCCCGCGCCCTCCGCTGTCTCTTCAATGGGCAACCTGCTCGGCGGGGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR CCA 90 bp | CTGACCCCGCCGAGCAGGTTGCCCATTGAAGAGACAGCGGAGGGCGCGGGCTGCAATGACACAGCTCTTTaGAGGCAGTGCATTTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTPPSRLPIEETAEGAGCNDTAL*RQCICS Trigger: AGAGCAAATGCACTGCCTCCAAAGAGCTGTGTCATT...GCAGCCCGCGCCCTCCGCTGTCTCTTCAATGGGCAACCTGCTCGGCGGGGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR TCA 90 bp | CTGACCCCGCCGAGCAGGTTGCCCATTGAAGAGACAGCGGAGGGCGCGGGCTGCTTTCCCAATGAATCTTaGCATTTACCAGCCATGACA | + |
|
Preference number: 4 (lower is better) Translates to: LTPPSRLPIEETAEGAGCFPNES*HLPAMT Trigger: TGTCATGGCTGGTAAATGTCAAGATTCATTGGGAAA...GCAGCCCGCGCCCTCCGCTGTCTCTTCAATGGGCAACCTGCTCGGCGGGGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR GCA 90 bp | ACTGCCAGGCTCTGGACTCCCTTGTCCACCTCCTCCCCAAGCACTCTGGATGCCGAGTACATGTCACACTaGAAATGGAGGAGGGTACTG | + |
|
Preference number: 4 (lower is better) Translates to: TARLWTPLSTSSPSTLDAEYMSH*KWRRVL Trigger: CAGTACCCTCCTCCATTTGCAGTGTGACATGTACTC...GGCATCCAGAGTGCTTGGGGAGGAGGTGGACAAGGGAGTCCAGAGCCTGGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR CCA 90 bp | CTGACCCCGCCGAGCAGGTTGCCCATTGAAGAGACAGCGGAGGGCGCGGGCTGCGCATTTGCTCTAAATTaGCATATTTATCATCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LTPPSRLPIEETAEGAGCAFALN*HIYHLD Trigger: GTCCAGATGATAAATATGCCAATTTAGAGCAAATGC...GCAGCCCGCGCCCTCCGCTGTCTCTTCAATGGGCAACCTGCTCGGCGGGGTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CAA 72 bp | GAGCCCGACGCAGGTAGAGTTGTGGTTTTCTGGGCTTaGCATCGCTCTGGCTGTTCTTTCTTAGGTGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: EPDAGRVVVFWA*HRSGCSFLGDP Trigger: GGGGTCACCTAAGAAAGAACAGCCAGAGCGATGCAAAGCCCAGAAAACCACAACTCTACCTGCGTCGGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGTACTGCAGAAGGATCCCAGTGGCCTGCGTGCGTTTTGCTGGCGAGACGACATTTACCAGCCATaGCAGAGAATACCAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KAVLQKDPSGLRAFCWRDDIYQP*QRIPKR Trigger: CCTCTTTGGTATTCTCTGTCATGGCTGGTAAATGTC...GTCTCGCCAGCAAAACGCACGCAGGCCACTGGGATCCTTCTGCAGTACAGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGTACTGCAGAAGGATCCCAGTGGCCTGCGTGCGTTTTGCTGGCGAGACAAGAGAGCCAACTGCTaGCATTCTGTATACTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAVLQKDPSGLRAFCWRDKRANC*HSVYFP Trigger: AGGAAAGTATACAGAATGTCAGCAGTTGGCTCTCTT...GTCTCGCCAGCAAAACGCACGCAGGCCACTGGGATCCTTCTGCAGTACAGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR TCA 90 bp | GCTTCCTTCTTCCAAGTGTTGAGATTACAGACTTTCTCCATCACACACAGTCAGTCCTTGGTGGCTATCTaGTGGACATTGGGAAAACGG | + |
|
Preference number: 4 (lower is better) Translates to: ASFFQVLRLQTFSITHSQSLVAI*WTLGKR Trigger: CCGTTTTCCCAATGTCCATCAGATAGCCACCAAGGA...CTGACTGTGTGTGATGGAGAAAGTCTGTAATCTCAACACTTGGAAGAAGGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR TCA 90 bp | GCTTCCTTCTTCCAAGTGTTGAGATTACAGACTTTCTCCATCACACACAGTCAGACCCTGGTCATCATCTaGGATGACCAGTCCTATCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASFFQVLRLQTFSITHSQTLVII*DDQSYP Trigger: TGGATAGGACTGGTCATCTCAGATGATGACCAGGGT...CTGACTGTGTGTGATGGAGAAAGTCTGTAATCTCAACACTTGGAAGAAGGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR TCA 90 bp | GCTTCCTTCTTCCAAGTGTTGAGATTACAGACTTTCTCCATCACACACAGTCAGTCATTTTCTGGGCACTaGACACAATCAAAGCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASFFQVLRLQTFSITHSQSFSGH*TQSKQQ Trigger: CTGCTGCTTTGATTGTGTTCAGTGCCCAGAAAATGA...CTGACTGTGTGTGATGGAGAAAGTCTGTAATCTCAACACTTGGAAGAAGGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR TCA 90 bp | CAGGTGAAAATGATGGTAGCCATTCCTCAATTGAGATTCCTGGATCTCAACATGGATAACATCCCATTGTaGGGTTGTGATCCAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: QVKMMVAIPQLRFLDLNMDNIPL*GCDPDP Trigger: AGGATCTGGATCACAACCTCACAATGGGATGTTATC...CATGTTGAGATCCAGGAATCTCAATTGAGGAATGGCTACCATCATTTTCACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR TCA 90 bp | CAGGTGAAAATGATGGTAGCCATTCCTCAATTGAGATTCCTGGATCTCAACATGTTCATAAGCCAGAAATaGCACAGCTCTTTGGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QVKMMVAIPQLRFLDLNMFISQK*HSSLEA Trigger: TGCCTCCAAAGAGCTGTGTCATTTCTGGCTTATGAA...CATGTTGAGATCCAGGAATCTCAATTGAGGAATGGCTACCATCATTTTCACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR TCA 90 bp | CAGGTGAAAATGATGGTAGCCATTCCTCAATTGAGATTCCTGGATCTCAACATGAGAACACCAGCATGCTaGAAGTTAGGAACTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QVKMMVAIPQLRFLDLNMRTPAC*KLGTWL Trigger: AAGCCAAGTTCCTAACTTTCAGCATGCTGGTGTTCT...CATGTTGAGATCCAGGAATCTCAATTGAGGAATGGCTACCATCATTTTCACCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR GCA 90 bp | AGTTTGAGGAAGTTGGCTGGGAATACAAATATTCTAGAAAGGGAATGGGTAGACGCTCTTTGGAGGCAGTaGATTTGCTCTAAATTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLRKLAGNTNILEREWVDALWRQ*ICSKLA Trigger: TGCCAATTTAGAGCAAATGCACTGCCTCCAAAGAGC...GTCTACCCATTCCCTTTCTAGAATATTTGTATTCCCAGCCAACTTCCTCAAACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CAA 72 bp | AAACCACAGGTGAAAATGATGGTAGCCATTCCTCAATaGAGATTCCTGGATCTCAACATGTTCAGGTTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KPQVKMMVAIPQ*RFLDLNMFRFV Trigger: CACAAACCTGAACATGTTGAGATCCAGGAATCTCAATTGAGGAATGGCTACCATCATTTTCACCTGTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR TCA 90 bp | CAGGTGAAAATGATGGTAGCCATTCCTCAATTGAGATTCCTGGATCTCAACATGTCTGATGAATTTTCCTaGATCCAGGAGTACATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QVKMMVAIPQLRFLDLNMSDEFS*IQEYMS Trigger: TGACATGTACTCCTGGATTCAGGAAAATTCATCAGA...CATGTTGAGATCCAGGAATCTCAATTGAGGAATGGCTACCATCATTTTCACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR CCA 90 bp | GCTTCCTTCTTCCAAGTGTTGAGATTACAGACTTTCTCCATCACACACAGTCAGTATCTACTGTTTCATTaGAAACCTCATTTTCTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASFFQVLRLQTFSITHSQYLLFH*KPHFLG Trigger: GCCCAGAAAATGAGGTTTCCAATGAAACAGTAGATA...CTGACTGTGTGTGATGGAGAAAGTCTGTAATCTCAACACTTGGAAGAAGGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR TCA 90 bp | CCTATACAGTCATTTACAGAAAACTGTAAATATGGGAATGGGACAGGTTGTCATTGTGGTGTGCAAAAGTaGCAGTACCATGGAAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PIQSFTENCKYGNGTGCHCGVQK*QYHGRD Trigger: ATCTCTTCCATGGTACTGTCACTTTTGCACACCACA...ATGACAACCTGTCCCATTCCCATATTTACAGTTTTCTGTAAATGACTGTATAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGGAAGTTGGCTGGGAATACAAATATTCTAGAAAGGGAATGGGTAGACCAGGTTAGGATTAAATaGTCCAAAGAAAACCGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLRKLAGNTNILEREWVDQVRIK*SKENRW Trigger: CCAACGGTTTTCTTTGGACCATTTAATCCTAACCTG...GTCTACCCATTCCCTTTCTAGAATATTTGTATTCCCAGCCAACTTCCTCAAACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR CCA 90 bp | CAGGTGAAAATGATGGTAGCCATTCCTCAATTGAGATTCCTGGATCTCAACATGAAGTTGTTGACTCCATaGGAAACAAGGAAAATAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QVKMMVAIPQLRFLDLNMKLLTP*ETRKIA Trigger: AGCTATTTTCCTTGTTTCCCATGGAGTCAACAACTT...CATGTTGAGATCCAGGAATCTCAATTGAGGAATGGCTACCATCATTTTCACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CAA 72 bp | CAGTCTTCTTTCATATACCTTCTAGAACAACTTGCTTaGAGTTACTACTGTCTACAGTTAGTAGGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QSSFIYLLEQLA*SYYCLQLVGPP Trigger: TGGTGGCCCTACTAACTGTAGACAGTAGTAACTCAAAGCAAGTTGTTCTAGAAGGTATATGAAAGAAGACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR TCA 90 bp | AGTTTGAGGAAGTTGGCTGGGAATACAAATATTCTAGAAAGGGAATGGGTAGACATTCCACCTCAGTATTaGCTGAGAAATGTTTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLRKLAGNTNILEREWVDIPPQY*LRNVYW Trigger: CCAATAAACATTTCTCAGTCAATACTGAGGTGGAAT...GTCTACCCATTCCCTTTCTAGAATATTTGTATTCCCAGCCAACTTCCTCAAACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR TCA 90 bp | CCTATACAGTCATTTACAGAAAACTGTAAATATGGGAATGGGACAGGTTGTCATTCCAATGAAGAGCAATaGGCAGAGAAAGCAGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PIQSFTENCKYGNGTGCHSNEEQ*AEKAEN Trigger: GTTTTCTGCTTTCTCTGCTCATTGCTCTTCATTGGA...ATGACAACCTGTCCCATTCCCATATTTACAGTTTTCTGTAAATGACTGTATAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR CCA 90 bp | AGTTTGAGGAAGTTGGCTGGGAATACAAATATTCTAGAAAGGGAATGGGTAGACCTCATATTCACTTGCTaGTATTCTAAAATCCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRKLAGNTNILEREWVDLIFTC*YSKIQP Trigger: AGGTTGGATTTTAGAATACCAGCAAGTGAATATGAG...GTCTACCCATTCCCTTTCTAGAATATTTGTATTCCCAGCCAACTTCCTCAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CAA 72 bp | CTATTGGGTCTGCTTTACTTCACTCAGCGTGATCTTTaGTCACTTCATTTATATTTGCGCAAATTTCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLGLLYFTQRDL*SLHLYLRKFHE Trigger: TTCATGAAATTTGCGCAAATATAAATGAAGTGACAAAAGATCACGCTGAGTGAAGTAAAGCAGACCCAATAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| 3UTR CAA 72 bp | TTTGTTCTTATAAAAGCGAAGGTAACTCGAGTCCTTTaGATATCGGATATCTTTGAAGTTTGGGTACTTATG | + |
|
Preference number: 4 (lower is better) Translates to: FVLIKAKVTRVL*ISDIFEVWVLM Trigger: CATAAGTACCCAAACTTCAAAGATATCCGATATCAAAAGGACTCGAGTTACCTTCGCTTTTATAAGAACAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR CAA 90 bp | ACTGCCAGGCTCTGGACTCCCTTGTCCACCTCCTCCCCAAGCACTCTGGATGCCCATACATATTACCCCTaGTCATGTATATCTTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: TARLWTPLSTSSPSTLDAHTYYP*SCISSW Trigger: CCATGAAGATATACATGACAAGGGGTAATATGTATG...GGCATCCAGAGTGCTTGGGGAGGAGGTGGACAAGGGAGTCCAGAGCCTGGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR CAA 90 bp | ACTGCCAGGCTCTGGACTCCCTTGTCCACCTCCTCCCCAAGCACTCTGGATGCCTTCAGATATATGAAGTaGTTGACTCCATGGGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: TARLWTPLSTSSPSTLDAFRYMK*LTPWET Trigger: TGTTTCCCATGGAGTCAACAACTTCATATATCTGAA...GGCATCCAGAGTGCTTGGGGAGGAGGTGGACAAGGGAGTCCAGAGCCTGGCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR CAA 90 bp | AAAGCTGTACTGCAGAAGGATCCCAGTGGCCTGCGTGCGTTTTGCTGGCGAGACAGATATATGAAGTTGTaGACTCCATGGGAAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KAVLQKDPSGLRAFCWRDRYMKL*TPWETR Trigger: CCTTGTTTCCCATGGAGTCAACAACTTCATATATCT...GTCTCGCCAGCAAAACGCACGCAGGCCACTGGGATCCTTCTGCAGTACAGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR CAA 90 bp | CAGGTGAAAATGATGGTAGCCATTCCTCAATTGAGATTCCTGGATCTCAACATGATGCAGGTGACCTGGTaGGGATGTCCAATGAAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QVKMMVAIPQLRFLDLNMMQVTW*GCPMKS Trigger: GCTCTTCATTGGACATCCCAACCAGGTCACCTGCAT...CATGTTGAGATCCAGGAATCTCAATTGAGGAATGGCTACCATCATTTTCACCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS TCA 90 bp | CACAATCAAAGCAGCAGTCTGCTGTTTCTTTCTGATGAATTTTCCTaGATCCAGGAGTACATGTCACACTGCAAATGGAGGAGGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: HNQSSSLLFLSDEFS*IQEYMSHCKWRRVL Trigger: CAGTACCCTCCTCCATTTGCAGTGTGACATGTACTCCTGGATTCAGGAAAATTCATCAGAAAGAAACAGCAGACTGCTGCTTTGATTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS CCA 90 bp | ATGGACATTGGGAAAACGGTCATGGTCACTCAGGTTAGGATTAAATaGTCCAAAGAAAACCGTTGGTGTCCAAGAATCAATTGCCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: MDIGKTVMVTQVRIK*SKENRWCPRINCQF Trigger: AAACTGGCAATTGATTCTTGGACACCAACGGTTTTCTTTGGACCATTTAATCCTAACCTGAGTGACCATGACCGTTTTCCCAATGTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS CCA 90 bp | TATCATCTGGACACCTCACACACTGTTCCATATCTACTGTTTCATTaGAAACCTCATTTTCTGGGCACTGAACACAATCAAAGCAGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: YHLDTSHTVPYLLFH*KPHFLGTEHNQSSS Trigger: ACTGCTGCTTTGATTGTGTTCAGTGCCCAGAAAATGAGGTTTCCAATGAAACAGTAGATATGGAACAGTGTGTGAGGTGTCCAGATGATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS CCA 90 bp | CCAGAAATGACACAGCTCTTTGGAGGCAGTGCATTTGCTCTAAATTaGCATATTTATCATCTGGACACCTCACACACTGTTCCATATCTA | + |
|
Preference number: 5 (lower is better) Translates to: PEMTQLFGGSAFALN*HIYHLDTSHTVPYL Trigger: TAGATATGGAACAGTGTGTGAGGTGTCCAGATGATAAATATGCCAATTTAGAGCAAATGCACTGCCTCCAAAGAGCTGTGTCATTTCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR CAA 90 bp | CAGGTGAAAATGATGGTAGCCATTCCTCAATTGAGATTCCTGGATCTCAACATGGTCTTCCACCATTTTTaGAGACTCTACTTGATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QVKMMVAIPQLRFLDLNMVFHHF*RLYLMK Trigger: CTTCATCAAGTAGAGTCTCAAAAAATGGTGGAAGAC...CATGTTGAGATCCAGGAATCTCAATTGAGGAATGGCTACCATCATTTTCACCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR CAA 90 bp | CAGGTGAAAATGATGGTAGCCATTCCTCAATTGAGATTCCTGGATCTCAACATGAGATCAGGATTCTTGTaGATCTCATCAGTAGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: QVKMMVAIPQLRFLDLNMRSGFL*ISSVAK Trigger: TTTTGCTACTGATGAGATCAACAAGAATCCTGATCT...CATGTTGAGATCCAGGAATCTCAATTGAGGAATGGCTACCATCATTTTCACCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR CAA 90 bp | CCTATACAGTCATTTACAGAAAACTGTAAATATGGGAATGGGACAGGTTGTCATGTCCAAAGAAAACCGTaGGTGTCCAAGAATCAATTG | + |
|
Preference number: 5 (lower is better) Translates to: PIQSFTENCKYGNGTGCHVQRKP*VSKNQL Trigger: CAATTGATTCTTGGACACCAACGGTTTTCTTTGGAC...ATGACAACCTGTCCCATTCCCATATTTACAGTTTTCTGTAAATGACTGTATAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS TCA 90 bp | ATTGTATGTCCAGATTTCCCAATGAATCTTGACATTTACCAGCCATaGCAGAGAATACCAAAGAGGTGTTTGGTAAAAGATCAGGATTCT | + |
|
Preference number: 5 (lower is better) Translates to: IVCPDFPMNLDIYQP*QRIPKRCLVKDQDS Trigger: AGAATCCTGATCTTTTACCAAACACCTCTTTGGTATTCTCTGTCATGGCTGGTAAATGTCAAGATTCATTGGGAAATCTGGACATACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS-3UTR CAA 90 bp | CCTATACAGTCATTTACAGAAAACTGTAAATATGGGAATGGGACAGGTTGTCATACAATGGGAGTATCCTaGTACTTCACAAAAGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: PIQSFTENCKYGNGTGCHTMGVS*YFTKVT Trigger: AGTCACTTTTGTGAAGTACAAGGATACTCCCATTGT...ATGACAACCTGTCCCATTCCCATATTTACAGTTTTCTGTAAATGACTGTATAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS TCA 90 bp | TCATTTATTAGCATATATTGTATGTCCAGATTTCCCAATGAATCTTaGCATTTACCAGCCATGACAGAGAATACCAAAGAGGTGTTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SFISIYCMSRFPNES*HLPAMTENTKEVFG Trigger: ACCAAACACCTCTTTGGTATTCTCTGTCATGGCTGGTAAATGTCAAGATTCATTGGGAAATCTGGACATACAATATATGCTAATAAATGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS TCA 72 bp | AGGAGTACATGTCACACTGCAAATGGAGGAGGGTACTaGTGTTCCTCCTGTGGCCCATTCCAAATCTTCAGA | + |
|
Preference number: 6 (lower is better) Translates to: RSTCHTANGGGY*CSSCGPFQIFR Trigger: TCTGAAGATTTGGAATGGGCCACAGGAGGAACATCAGTACCCTCCTCCATTTGCAGTGTGACATGTACTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS GCA 72 bp | GCCAGAAATGACACAGCTCTTTGGAGGCAGTGCATTTaGTCTAAATTGGCATATTTATCATCTGGACACCTC | + |
|
Preference number: 6 (lower is better) Translates to: ARNDTALWRQCI*SKLAYLSSGHL Trigger: GAGGTGTCCAGATGATAAATATGCCAATTTAGAGCAAATGCACTGCCTCCAAAGAGCTGTGTCATTTCTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS CAA 90 bp | GCCAGAAATGACACAGCTCTTTGGAGGCAGTGCATTTGCTCTAAATaGGCATATTTATCATCTGGACACCTCACACACTGTTCCATATCT | + |
|
Preference number: 6 (lower is better) Translates to: ARNDTALWRQCICSK*AYLSSGHLTHCSIS Trigger: AGATATGGAACAGTGTGTGAGGTGTCCAGATGATAAATATGCCAATTTAGAGCAAATGCACTGCCTCCAAAGAGCTGTGTCATTTCTGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS CCA 72 bp | GGGAAAACGGTCATGGTCACTCAGGTTAGGATTAAATaGTCCAAAGAAAACCGTTGGTGTCCAAGAATCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GKTVMVTQVRIK*SKENRWCPRIN Trigger: ATTGATTCTTGGACACCAACGGTTTTCTTTGGACCATTTAATCCTAACCTGAGTGACCATGACCGTTTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS CCA 72 bp | GACACCTCACACACTGTTCCATATCTACTGTTTCATTaGAAACCTCATTTTCTGGGCACTGAACACAATCAA | + |
|
Preference number: 6 (lower is better) Translates to: DTSHTVPYLLFH*KPHFLGTEHNQ Trigger: TTGATTGTGTTCAGTGCCCAGAAAATGAGGTTTCCAATGAAACAGTAGATATGGAACAGTGTGTGAGGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS CAA 72 bp | TGTGGCCCATTCCAAATCTTCAGATATATGAAGTTGTaGACTCCATGGGAAACAAGGAAAATAGCTTCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: CGPFQIFRYMKL*TPWETRKIASY Trigger: ATAGGAAGCTATTTTCCTTGTTTCCCATGGAGTCAACAACTTCATATATCTGAAGATTTGGAATGGGCCACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||
| CDS TCA 72 bp | AGCATATATTGTATGTCCAGATTTCCCAATGAATCTTaGCATTTACCAGCCATGACAGAGAATACCAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SIYCMSRFPNES*HLPAMTENTKE Trigger: CTCTTTGGTATTCTCTGTCATGGCTGGTAAATGTCAAGATTCATTGGGAAATCTGGACATACAATATATGCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170257.4 |
||