Pregenerated sensors for VMN2R85 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000092048Ensembl transcript IDs: ENSMUST00000171811.4
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGAAGGAGACCATGGAGGAATGCAAATTGCTAGCTTGTCCAGCATaGTTTTCTAAACTGCCCAGGGCTGACAGGCTAAGGTTAGCACCA | + |
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Preference number: 1 (lower is better) Translates to: VKETMEECKLLACPA*FSKLPRADRLRLAP Trigger: TGGTGCTAACCTTAGCCTGTCAGCCCTGGGCAGTTTAGAAAATCATGCTGGACAAGCTAGCAATTTGCATTCCTCCATGGTCTCCTTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR TCA 90 bp | AGAATTCCACCAGACCAACACACTTACCTCATTGCCAGGGAAGTGTaGCAGCAGGCAGAAAATGGAGATTACATGTCTTATATCTCGAGT | + |
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Preference number: 1 (lower is better) Translates to: RIPPDQHTYLIAREV*QQAENGDYMSYISS Trigger: ACTCGAGATATAAGACATGTAATCTCCATTTTCTGCCTGCTGTCACACTTCCCTGGCAATGAGGTAAGTGTGTTGGTCTGGTGGAATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR TCA 90 bp | GCCTTTGATGAACTTATAGGCCTCCCATACGTTTTCTTCTTACAGTaGTTACATGCATTTGGCAACAACTCCACCCAGCTTCCTGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: AFDELIGLPYVFFLQ*LHAFGNNSTQLPEE Trigger: TTCTTCAGGAAGCTGGGTGGAGTTGTTGCCAAATGCATGTAATCACTGTAAGAAGAAAACGTATGGGAGGCCTATAAGTTCATCAAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR CCA 90 bp | ACTGTTTTGTTCAAGTCACCCAATACCTCTGCCACTTATACTTTTTaGCATACTTTCCCACACAGATTGCTGAACCCTGAGTGCTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: TVLFKSPNTSATYTF*HTFPHRLLNPECCF Trigger: AAAACAGCACTCAGGGTTCAGCAATCTGTGTGGGAAAGTATGCCAAAAAGTATAAGTGGCAGAGGTATTGGGTGACTTGAACAAAACAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR CCA 90 bp | CTTCATAGAACATGGTATATCTTTCCGATATCCCAGGCCTCTGTTTaGCCTTCAACATTATGCAGTACTGTAGCTAAGCCCAATAAGATA | + |
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Preference number: 1 (lower is better) Translates to: LHRTWYIFPISQASV*PSTLCSTVAKPNKI Trigger: TATCTTATTGGGCTTAGCTACAGTACTGCATAATGTTGAAGGCCAAACAGAGGCCTGGGATATCGGAAAGATATACCATGTTCTATGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR TCA 90 bp | ATATGGGATAGTGTTATTTCTCTATGTACATTCATCACAGTTAACTaGAAGAAGCCAAGACAAGAACATGGATGTAGGAACTCTGTCAAA | + |
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Preference number: 1 (lower is better) Translates to: IWDSVISLCTFITVN*KKPRQEHGCRNSVK Trigger: TTTGACAGAGTTCCTACATCCATGTTCTTGTCTTGGCTTCTTTCAGTTAACTGTGATGAATGTACATAGAGAAATAACACTATCCCATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR CCA 90 bp | CTGCCCAGGGCTGACAGGCTAAGGTTAGCACCACCCACATTGGGATGGGTTCTGTCCCAGGCCTCTGTTTaGCCTTCAACATTATGCAGT | + |
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Preference number: 2 (lower is better) Translates to: LPRADRLRLAPPTLGWVLSQASV*PSTLCS Trigger: ACTGCATAATGTTGAAGGCCAAACAGAGGCCTGGGA...CAGAACCCATCCCAATGTGGGTGGTGCTAACCTTAGCCTGTCAGCCCTGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR TCA 90 bp | AGCACCACCCACATTGGGATGGGTTCTGCTACACTGATCAGTAATCAAGGAAACCTCTTGGAGGTCATATaGTTGTCAGTTCTTTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: STTHIGMGSATLISNQGNLLEVI*LSVLLC Trigger: ACACAAAAGAACTGACAATCATATGACCTCCAAGAG...GTTTCCTTGATTACTGATCAGTGTAGCAGAACCCATCCCAATGTGGGTGGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR GCA 90 bp | AGCACCACCCACATTGGGATGGGTTCTGCTACACTGATCAGTAATCAAGGAAACGGGACAGGATGTCATTaGAAGAAAATGGAACAAAGA | + |
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Preference number: 2 (lower is better) Translates to: STTHIGMGSATLISNQGNGTGCH*KKMEQR Trigger: TCTTTGTTCCATTTTCTTGCAATGACATCCTGTCCC...GTTTCCTTGATTACTGATCAGTGTAGCAGAACCCATCCCAATGTGGGTGGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR TCA 90 bp | CATGAGTGCACGAGGATAGAAGAGGGCAATGAAAACGAAATAATTGGATTCAGATGGGTTCTGCTACACTaGTCAGTAATCAAGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: HECTRIEEGNENEIIGFRWVLLH*SVIKET Trigger: TGTTTCCTTGATTACTGATCAGTGTAGCAGAACCCA...TCTGAATCCAATTATTTCGTTTTCATTGCCCTCTTCTATCCTCGTGCACTCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR TCA 90 bp | GTGTTTGCAGTTGTTCATGTCTCCTTGTTAATACTAGGACACTTGATCATGTGCTGGTGGGAAAGATCTTaGAAGTCAAAGTTTGAGGAA | + |
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Preference number: 2 (lower is better) Translates to: VFAVVHVSLLILGHLIMCWWERS*KSKFEE Trigger: TTCCTCAAACTTTGACTTTCAAGATCTTTCCCACCA...GCACATGATCAAGTGTCCTAGTATTAACAAGGAGACATGAACAACTGCAAACAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR GCA 90 bp | CATGTCTCCTTGTTAATACTAGGACACTTGATCATGTGCAGATCTTATGAATGCAGGACTGCTATGCTATaGATGCTAGTATGGAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: HVSLLILGHLIMCRSYECRTAML*MLVWKE Trigger: TTCCTTCCATACTAGCATGCATAGCATAGCAGTCCT...GCATTCATAAGATCTGCACATGATCAAGTGTCCTAGTATTAACAAGGAGACATG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR TCA 90 bp | TCTGCCTTTCAATTGAGCAAACTAATGTCATGTACCATCATGTCTGGCTTGATTGAGCCATTCCTCAATTaGGATTCCTGGATATCAATA | + |
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Preference number: 2 (lower is better) Translates to: SAFQLSKLMSCTIMSGLIEPFLN*DSWISI Trigger: TATTGATATCCAGGAATCTCAATTGAGGAATGGCTC...AATCAAGCCAGACATGATGGTACATGACATTAGTTTGCTCAATTGAAAGGCAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR TCA 90 bp | CATGTCTCCTTGTTAATACTAGGACACTTGATCATGTGCAGATCTTATGAATGCAGACAAAACCACAGGTaGAAATTATGTGAGCCATTC | + |
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Preference number: 2 (lower is better) Translates to: HVSLLILGHLIMCRSYECRQNHR*KLCEPF Trigger: GAATGGCTCACATAATTTTCACCTGTGGTTTTGTCT...GCATTCATAAGATCTGCACATGATCAAGTGTCCTAGTATTAACAAGGAGACATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR TCA 90 bp | GTGTTTGCAGTTGTTCATGTCTCCTTGTTAATACTAGGACACTTGATCATGTGCAGTTACACAGAAATATaGAGAAGATGGTGGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: VFAVVHVSLLILGHLIMCSYTEI*RRWWER Trigger: TCTTTCCCACCATCTTCTTCATATTTCTGTGTAACT...GCACATGATCAAGTGTCCTAGTATTAACAAGGAGACATGAACAACTGCAAACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR TCA 90 bp | TCTGCCTTTCAATTGAGCAAACTAATGTCATGTACCATCATGTCTGGCTTGATTTTCATCACAGTTAACTaGAAGAAGCCAAGACAAGAA | + |
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Preference number: 2 (lower is better) Translates to: SAFQLSKLMSCTIMSGLIFITVN*KKPRQE Trigger: TTCTTGTCTTGGCTTCTTTCAGTTAACTGTGATGAA...AATCAAGCCAGACATGATGGTACATGACATTAGTTTGCTCAATTGAAAGGCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR GCA 90 bp | CATGAGTGCACGAGGATAGAAGAGGGCAATGAAAACGAAATAATTGGATTCAGAGGGGTGTATATGATGTaGAATTCACAAAGAAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: HECTRIEEGNENEIIGFRGVYMM*NSQRRN Trigger: ATTTCTTCTTTGTGAATTGCACATCATATACACCCC...TCTGAATCCAATTATTTCGTTTTCATTGCCCTCTTCTATCCTCGTGCACTCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR GCA 90 bp | TCTGCCTTTCAATTGAGCAAACTAATGTCATGTACCATCATGTCTGGCTTGATTATGACTGTAACCTCTTaGAAAATATTTCCTCATCCA | + |
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Preference number: 2 (lower is better) Translates to: SAFQLSKLMSCTIMSGLIMTVTS*KIFPHP Trigger: TGGATGAGGAAATATTTTGCAAGAGGTTACAGTCAT...AATCAAGCCAGACATGATGGTACATGACATTAGTTTGCTCAATTGAAAGGCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCTTTCAATTGAGCAAACTAATGTCATGTACCATCATGTCTGGCTTGATTTGTCTTCATAGAACATaGTATATCTTTCCGATATCC | + |
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Preference number: 2 (lower is better) Translates to: SAFQLSKLMSCTIMSGLICLHRT*YIFPIS Trigger: GGATATCGGAAAGATATACCATGTTCTATGAAGACA...AATCAAGCCAGACATGATGGTACATGACATTAGTTTGCTCAATTGAAAGGCAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR CCA 90 bp | TCTGCCTTTCAATTGAGCAAACTAATGTCATGTACCATCATGTCTGGCTTGATTGTTCAGAGTTACAAATaGTATGTTGGAATCAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: SAFQLSKLMSCTIMSGLIVQSYK*YVGIRK Trigger: TTTCCTGATTCCAACATACCATTTGTAACTCTGAAC...AATCAAGCCAGACATGATGGTACATGACATTAGTTTGCTCAATTGAAAGGCAGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR CAA 90 bp | CTTCAGGTTTGTGTACTTATGAATAAAACCATTTTCCACCAAACTTaGGTACTTAGTATAACAATGGACAGTGCTGTCCTGTTTGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: LQVCVLMNKTIFHQT*VLSITMDSAVLFVS Trigger: ACTTACAAACAGGACAGCACTGTCCATTGTTATACTAAGTACCAAAGTTTGGTGGAAAATGGTTTTATTCATAAGTACACAAACCTGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR CAA 90 bp | CAGAAATATGAAGAAGATGGTGGGAAAGATCTTGAAAGTCAAAGTTaGAGGAAGTTGGCTGGGAATACAAATTTTCTAGAAAGCAAATGT | + |
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Preference number: 2 (lower is better) Translates to: QKYEEDGGKDLESQS*RKLAGNTNFLESKC Trigger: ACATTTGCTTTCTAGAAAATTTGTATTCCCAGCCAACTTCCTCAAACTTTGACTTTCAAGATCTTTCCCACCATCTTCTTCATATTTCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR CCA 90 bp | TTGTGTCTTAATGATACTGTTTTGTTCAAGTCACCCAATACCTCTGCCACTTATTTTGAGGAAGTTGGCTaGGAATACAAATTTTCTAGA | + |
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Preference number: 2 (lower is better) Translates to: LCLNDTVLFKSPNTSATYFEEVG*EYKFSR Trigger: TCTAGAAAATTTGTATTCCCAGCCAACTTCCTCAAA...ATAAGTGGCAGAGGTATTGGGTGACTTGAACAAAACAGTATCATTAAGACACAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR CAA 90 bp | CTGCCCAGGGCTGACAGGCTAAGGTTAGCACCACCCACATTGGGATGGGTTCTGATCCCAGGCCTCTGTTaGGCCTTCAACATTATGCAG | + |
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Preference number: 3 (lower is better) Translates to: LPRADRLRLAPPTLGWVLIPGLC*AFNIMQ Trigger: CTGCATAATGTTGAAGGCCAAACAGAGGCCTGGGAT...CAGAACCCATCCCAATGTGGGTGGTGCTAACCTTAGCCTGTCAGCCCTGGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR CAA 90 bp | CTGCCCAGGGCTGACAGGCTAAGGTTAGCACCACCCACATTGGGATGGGTTCTGGATGACTGTAACCTCTaGCAAAATATTTCCTCATCC | + |
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Preference number: 3 (lower is better) Translates to: LPRADRLRLAPPTLGWVLDDCNL*QNISSS Trigger: GGATGAGGAAATATTTTGCAAGAGGTTACAGTCATC...CAGAACCCATCCCAATGTGGGTGGTGCTAACCTTAGCCTGTCAGCCCTGGGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR TCA 72 bp | ACCATGGAGGAATGCAAATTGCTAGCTTGTCCAGCATaGTTTTCTAAACTGCCCAGGGCTGACAGGCTAAGG | + |
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Preference number: 3 (lower is better) Translates to: TMEECKLLACPA*FSKLPRADRLR Trigger: CCTTAGCCTGTCAGCCCTGGGCAGTTTAGAAAATCATGCTGGACAAGCTAGCAATTTGCATTCCTCCATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR TCA 72 bp | CCAGACCAACACACTTACCTCATTGCCAGGGAAGTGTaGCAGCAGGCAGAAAATGGAGATTACATGTCTTAT | + |
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Preference number: 3 (lower is better) Translates to: PDQHTYLIAREV*QQAENGDYMSY Trigger: ATAAGACATGTAATCTCCATTTTCTGCCTGCTGTCACACTTCCCTGGCAATGAGGTAAGTGTGTTGGTCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR CCA 72 bp | ACATGGTATATCTTTCCGATATCCCAGGCCTCTGTTTaGCCTTCAACATTATGCAGTACTGTAGCTAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: TWYIFPISQASV*PSTLCSTVAKP Trigger: GGGCTTAGCTACAGTACTGCATAATGTTGAAGGCCAAACAGAGGCCTGGGATATCGGAAAGATATACCATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR CCA 72 bp | TTCAAGTCACCCAATACCTCTGCCACTTATACTTTTTaGCATACTTTCCCACACAGATTGCTGAACCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: FKSPNTSATYTF*HTFPHRLLNPE Trigger: CTCAGGGTTCAGCAATCTGTGTGGGAAAGTATGCCAAAAAGTATAAGTGGCAGAGGTATTGGGTGACTTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR TCA 72 bp | GAACTTATAGGCCTCCCATACGTTTTCTTCTTACAGTaGTTACATGCATTTGGCAACAACTCCACCCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: ELIGLPYVFFLQ*LHAFGNNSTQL Trigger: AAGCTGGGTGGAGTTGTTGCCAAATGCATGTAATCACTGTAAGAAGAAAACGTATGGGAGGCCTATAAGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR GCA 72 bp | CCGATATCCCAGGCCTCTGTTTGGCCTTCAACATTATaGAGTACTGTAGCTAAGCCCAATAAGATAATAACA | + |
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Preference number: 3 (lower is better) Translates to: PISQASVWPSTL*STVAKPNKIIT Trigger: TGTTATTATCTTATTGGGCTTAGCTACAGTACTGCATAATGTTGAAGGCCAAACAGAGGCCTGGGATATCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR CAA 90 bp | TCTGCCTTTCAATTGAGCAAACTAATGTCATGTACCATCATGTCTGGCTTGATTACCTCATTGAAAAACTaGCTTAGTGGTGCTACTGTC | + |
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Preference number: 3 (lower is better) Translates to: SAFQLSKLMSCTIMSGLITSLKN*LSGATV Trigger: GACAGTAGCACCACTAAGCAAGTTTTTCAATGAGGT...AATCAAGCCAGACATGATGGTACATGACATTAGTTTGCTCAATTGAAAGGCAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR CAA 90 bp | TCTGCCTTTCAATTGAGCAAACTAATGTCATGTACCATCATGTCTGGCTTGATTCTTGAAAGTCAAAGTTaGAGGAAGTTGGCTGGGAAT | + |
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Preference number: 3 (lower is better) Translates to: SAFQLSKLMSCTIMSGLILESQS*RKLAGN Trigger: ATTCCCAGCCAACTTCCTCAAACTTTGACTTTCAAG...AATCAAGCCAGACATGATGGTACATGACATTAGTTTGCTCAATTGAAAGGCAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR CAA 90 bp | CATGAGTGCACGAGGATAGAAGAGGGCAATGAAAACGAAATAATTGGATTCAGAGCAAAAAGTTACAGCTaGATTTCTCTTGCTGTGCTA | + |
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Preference number: 3 (lower is better) Translates to: HECTRIEEGNENEIIGFRAKSYS*ISLAVL Trigger: TAGCACAGCAAGAGAAATCAAGCTGTAACTTTTTGC...TCTGAATCCAATTATTTCGTTTTCATTGCCCTCTTCTATCCTCGTGCACTCATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR TCA 72 bp | CTAGGACACTTGATCATGTGCAGATCTTATGAATGCTaGGAAATCTCTTGGAGGTCATATGATTGTCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: LGHLIMCRSYEC*EISWRSYDCQF Trigger: GAACTGACAATCATATGACCTCCAAGAGATTTCTCAGCATTCATAAGATCTGCACATGATCAAGTGTCCTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR GCA 72 bp | CTCAAAAATACAATTGGAGGTAGGACTGCTATGCTATaGATGCTAGTATGGAAGGAAAAATGGTCACAAAGC | + |
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Preference number: 3 (lower is better) Translates to: LKNTIGGRTAML*MLVWKEKWSQS Trigger: GCTTTGTGACCATTTTTCCTTCCATACTAGCATGCATAGCATAGCAGTCCTACCTCCAATTGTATTTTTGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR CAA 90 bp | CCTTACTTATGTCATCAAATATGGACAATTTATGCTGGTTCCCAACTAGAAGCTTGGGACAGGATGTCATaGCAAGAAAATGGAACAAAG | + |
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Preference number: 3 (lower is better) Translates to: PYLCHQIWTIYAGSQLEAWDRMS*QENGTK Trigger: CTTTGTTCCATTTTCTTGCAATGACATCCTGTCCCA...AGCTTCTAGTTGGGAACCAGCATAAATTGTCCATATTTGATGACATAAGTAAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR CAA 90 bp | CATGAGTGCACGAGGATAGAAGAGGGCAATGAAAACGAAATAATTGGATTCAGATTCAATCATACTGTTTaGTGCCTAAGATTCACTCCT | + |
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Preference number: 3 (lower is better) Translates to: HECTRIEEGNENEIIGFRFNHTV*CLRFTP Trigger: AGGAGTGAATCTTAGGCACAAAACAGTATGATTGAA...TCTGAATCCAATTATTTCGTTTTCATTGCCCTCTTCTATCCTCGTGCACTCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR TCA 72 bp | CATGGCTTACAGACAAAACCACAGGTGAAAATTATGTaGGCCATTCCTCAATTGAGATTCCTGGATATCAAT | + |
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Preference number: 3 (lower is better) Translates to: HGLQTKPQVKIM*AIPQLRFLDIN Trigger: ATTGATATCCAGGAATCTCAATTGAGGAATGGCTCACATAATTTTCACCTGTGGTTTTGTCTGTAAGCCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR TCA 72 bp | CTTATACTTTTTGGCATACTTTCCCACACAGATTGCTaGACCCTGAGTGCTGTTTTTGTTCAATATAAACCA | + |
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Preference number: 3 (lower is better) Translates to: LILFGILSHTDC*TLSAVFVQYKP Trigger: TGGTTTATATTGAACAAAAACAGCACTCAGGGTTCAGCAATCTGTGTGGGAAAGTATGCCAAAAAGTATAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR TCA 72 bp | AAACTTTCAAAGCTGAGAGACCTTTGTTTTTACTTGTaGGATGTTCACCAATGTTGGTCATCAGTTCACTGT | + |
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Preference number: 3 (lower is better) Translates to: KLSKLRDLCFYL*DVHQCWSSVHC Trigger: ACAGTGAACTGATGACCAACATTGGTGAACATCTCACAAGTAAAAACAAAGGTCTCTCAGCTTTGAAAGTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR-3UTR CAA 90 bp | CCTTACTTATGTCATCAAATATGGACAATTTATGCTGGTTCCCAACTAGAAGCTTTCAAATACCAACCATaGCAATTTACCAACTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: PYLCHQIWTIYAGSQLEAFKYQP*QFTNLL Trigger: CAGCAAGTTGGTAAATTGCAATGGTTGGTATTTGAA...AGCTTCTAGTTGGGAACCAGCATAAATTGTCCATATTTGATGACATAAGTAAGG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR TCA 72 bp | TTCCTATTAAAGCTAAAGATGCTAACAAATACCACATaGGATCTAGGATTACAGAGCCTGACTTTGTCTTCA | + |
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Preference number: 3 (lower is better) Translates to: FLLKLKMLTNTT*DLGLQSLTLSS Trigger: TGAAGACAAAGTCAGGCTCTGTAATCCTAGATCTCATGTGGTATTTGTTAGCATCTTTAGCTTTAATAGGAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR GCA 72 bp | CAAACCTTACTTATGTCATCAAATATGGACAATTTATaGTGGTTCCCAACTAGAAGCTTTAACTCTAATGAC | + |
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Preference number: 3 (lower is better) Translates to: QTLLMSSNMDNL*WFPTRSFNSND Trigger: GTCATTAGAGTTAAAGCTTCTAGTTGGGAACCAGCATAAATTGTCCATATTTGATGACATAAGTAAGGTTTG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR TCA 90 bp | CTGCCCAGGGCTGACAGGCTAAGGTTAGCACCACCCACATTGGGATGGGTTCTGGCTCTTTGGAGGCAGTaGGTTTGCTCTATGTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: LPRADRLRLAPPTLGWVLALWRQ*VCSMLA Trigger: TGCCAACATAGAGCAAACTCACTGCCTCCAAAGAGC...CAGAACCCATCCCAATGTGGGTGGTGCTAACCTTAGCCTGTCAGCCCTGGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR GCA 90 bp | CTGCCCAGGGCTGACAGGCTAAGGTTAGCACCACCCACATTGGGATGGGTTCTGGCATCAAGGAGACCATaGCATGGGACAAATGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: LPRADRLRLAPPTLGWVLASRRP*HGTNVC Trigger: ACACACATTTGTCCCATGGCATGGTCTCCTTGATGC...CAGAACCCATCCCAATGTGGGTGGTGCTAACCTTAGCCTGTCAGCCCTGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR GCA 90 bp | CTGCCCAGGGCTGACAGGCTAAGGTTAGCACCACCCACATTGGGATGGGTTCTGCAGTACATGTCACACTaGACATTGAGGAGGGTACTG | + |
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Preference number: 4 (lower is better) Translates to: LPRADRLRLAPPTLGWVLQYMSH*TLRRVL Trigger: CAGTACCCTCCTCAATGTGCAGTGTGACATGTACTG...CAGAACCCATCCCAATGTGGGTGGTGCTAACCTTAGCCTGTCAGCCCTGGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR GCA 90 bp | CTGCCCAGGGCTGACAGGCTAAGGTTAGCACCACCCACATTGGGATGGGTTCTGATCAAAGCAGCAGTCTaGTGTTTCTTTCTGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LPRADRLRLAPPTLGWVLIKAAV*CFFLMN Trigger: ATTCATCAGAAAGAAACAGCAGACTGCTGCTTTGAT...CAGAACCCATCCCAATGTGGGTGGTGCTAACCTTAGCCTGTCAGCCCTGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR CCA 90 bp | CTGCCCAGGGCTGACAGGCTAAGGTTAGCACCACCCACATTGGGATGGGTTCTGCAAATACCATGCCTTTaGCTTTCTTCTCTTAAATCT | + |
|
Preference number: 4 (lower is better) Translates to: LPRADRLRLAPPTLGWVLQIPCL*LSSLKS Trigger: AGATTTAAGAGAAGAAAGCCAAAGGCATGGTATTTG...CAGAACCCATCCCAATGTGGGTGGTGCTAACCTTAGCCTGTCAGCCCTGGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR GCA 90 bp | ACCACAGGTGAAAATTATGTGAGCCATTCCTCAATTGAGATTCCTGGATATCAAGGCTGTGAAGGACAGTaGCATGCAGCCCAGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TTGENYVSHSSIEIPGYQGCEGQ*HAAQSH Trigger: ATGGCTCTGGGCTGCATGGCACTGTCCTTCACAGCC...TTGATATCCAGGAATCTCAATTGAGGAATGGCTCACATAATTTTCACCTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR GCA 90 bp | GACAAAACCACAGGTGAAAATTATGTGAGCCATTCCTCAATTGAGATTCCTGGACCAAATGTGGTCTGCTaGAGGATGCAGGTGACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DKTTGENYVSHSSIEIPGPNVVC*RMQVTW Trigger: CCAGGTCACCTGCATCCTGCAGCAGACCACATTTGG...TCCAGGAATCTCAATTGAGGAATGGCTCACATAATTTTCACCTGTGGTTTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR TCA 90 bp | CATGTCTCCTTGTTAATACTAGGACACTTGATCATGTGCAGATCTTATGAATGCCCCATTGTGAGGTTGTaGTCCAGATCCTCTGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: HVSLLILGHLIMCRSYECPIVRL*SRSSEH Trigger: GTGCTCAGAGGATCTGGATCACAACCTCACAATGGG...GCATTCATAAGATCTGCACATGATCAAGTGTCCTAGTATTAACAAGGAGACATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR GCA 90 bp | AGCACCACCCACATTGGGATGGGTTCTGCTACACTGATCAGTAATCAAGGAAACAAAGAAAACCTTTGGTaGCCAAGTATCAATTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: STTHIGMGSATLISNQGNKENLW*PSINCQ Trigger: CTGGCAATTGATACTTGGGCACCAAAGGTTTTCTTT...GTTTCCTTGATTACTGATCAGTGTAGCAGAACCCATCCCAATGTGGGTGGTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR CCA 90 bp | GACAAAACCACAGGTGAAAATTATGTGAGCCATTCCTCAATTGAGATTCCTGGAAGGATGCAGGTGACCTaGTTGGGATGTCCAATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DKTTGENYVSHSSIEIPGRMQVT*LGCPMK Trigger: CTTCATTGGACATCCCAACCAGGTCACCTGCATCCT...TCCAGGAATCTCAATTGAGGAATGGCTCACATAATTTTCACCTGTGGTTTTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR CAA 72 bp | TCCCATACGTTTTCTTCTTACAGTGATTACATGCATTaGGCAACAACTCCACCCAGCTTCCTGAAGAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: SHTFSSYSDYMH*ATTPPSFLKKT Trigger: GGTCTTCTTCAGGAAGCTGGGTGGAGTTGTTGCCAAATGCATGTAATCACTGTAAGAAGAAAACGTATGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR CCA 90 bp | AGCACCACCCACATTGGGATGGGTTCTGCTACACTGATCAGTAATCAAGGAAACTATCTTCATGGTTTCTaGGATCACATTCACAAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: STTHIGMGSATLISNQGNYLHGF*DHIHKS Trigger: GCTTTTGTGAATGTGATCCCAGAAACCATGAAGATA...GTTTCCTTGATTACTGATCAGTGTAGCAGAACCCATCCCAATGTGGGTGGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
||
| CDS-3UTR CCA 90 bp | CATGAGTGCACGAGGATAGAAGAGGGCAATGAAAACGAAATAATTGGATTCAGATATCCCAGGACAACATaGAAGGAAAGGACAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HECTRIEEGNENEIIGFRYPRTT*KERTEP Trigger: AGGCTCTGTCCTTTCCTTCCATGTTGTCCTGGGATA...TCTGAATCCAATTATTTCGTTTTCATTGCCCTCTTCTATCCTCGTGCACTCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
||
| CDS-3UTR TCA 90 bp | ACCACAGGTGAAAATTATGTGAGCCATTCCTCAATTGAGATTCCTGGATATCAAAAGGGAGCCAACTGCTaGCATTCTGTGTACTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTGENYVSHSSIEIPGYQKGANC*HSVYFP Trigger: AGGAAAGTACACAGAATGTCAGCAGTTGGCTCCCTT...TTGATATCCAGGAATCTCAATTGAGGAATGGCTCACATAATTTTCACCTGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR TCA 90 bp | CATGAGTGCACGAGGATAGAAGAGGGCAATGAAAACGAAATAATTGGATTCAGATCCAATGAAGAGCAATaGGCAGAGAAAGCAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: HECTRIEEGNENEIIGFRSNEEQ*AEKAED Trigger: GTCTTCTGCTTTCTCTGCTCATTGCTCTTCATTGGA...TCTGAATCCAATTATTTCGTTTTCATTGCCCTCTTCTATCCTCGTGCACTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
||
| CDS-3UTR CCA 90 bp | GTGTTTGCAGTTGTTCATGTCTCCTTGTTAATACTAGGACACTTGATCATGTGCCTATCTGATGGACATTaGGAAAACGGTCATGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VFAVVHVSLLILGHLIMCLSDGH*ENGHGH Trigger: GTGACCATGACCGTTTTCCCAATGTCCATCAGATAG...GCACATGATCAAGTGTCCTAGTATTAACAAGGAGACATGAACAACTGCAAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
||
| CDS-3UTR CCA 90 bp | CATGAGTGCACGAGGATAGAAGAGGGCAATGAAAACGAAATAATTGGATTCAGAAATGTGTGTCCTTGGTaGCTATCTGATGGACATTGG | + |
|
Preference number: 4 (lower is better) Translates to: HECTRIEEGNENEIIGFRNVCPW*LSDGHW Trigger: CCAATGTCCATCAGATAGCCACCAAGGACACACATT...TCTGAATCCAATTATTTCGTTTTCATTGCCCTCTTCTATCCTCGTGCACTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR CCA 90 bp | AGCACCACCCACATTGGGATGGGTTCTGCTACACTGATCAGTAATCAAGGAAACCTCAGAAATGCTTATTaGGTATTTGGAAGTGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: STTHIGMGSATLISNQGNLRNAY*VFGSVH Trigger: ATGAACACTTCCAAATACCCAATAAGCATTTCTGAG...GTTTCCTTGATTACTGATCAGTGTAGCAGAACCCATCCCAATGTGGGTGGTGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR CCA 90 bp | CATGAGTGCACGAGGATAGAAGAGGGCAATGAAAACGAAATAATTGGATTCAGAGGCATATTTATCGTCTaGACACCTCACACACTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: HECTRIEEGNENEIIGFRGIFIV*TPHTLF Trigger: GAACAGTGTGTGAGGTGTCCAGACGATAAATATGCC...TCTGAATCCAATTATTTCGTTTTCATTGCCCTCTTCTATCCTCGTGCACTCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
||
| CDS-3UTR CCA 90 bp | GACAAAACCACAGGTGAAAATTATGTGAGCCATTCCTCAATTGAGATTCCTGGAAAAATAGTCCAAATGTaGTCTGCTGCAGGATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DKTTGENYVSHSSIEIPGKIVQM*SAAGCR Trigger: CCTGCATCCTGCAGCAGACCACATTTGGACTATTTT...TCCAGGAATCTCAATTGAGGAATGGCTCACATAATTTTCACCTGTGGTTTTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR TCA 90 bp | GACAAAACCACAGGTGAAAATTATGTGAGCCATTCCTCAATTGAGATTCCTGGAGACATTTATCAGCCATaGCAGAGAATACCAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: DKTTGENYVSHSSIEIPGDIYQP*QRIPKM Trigger: CATCTTTGGTATTCTCTGTCATGGCTGATAAATGTC...TCCAGGAATCTCAATTGAGGAATGGCTCACATAATTTTCACCTGTGGTTTTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
||
| CDS-3UTR CCA 90 bp | ACCACAGGTGAAAATTATGTGAGCCATTCCTCAATTGAGATTCCTGGATATCAATCCTCCAAAAGCAAATaGGTTCTGTCAAACAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TTGENYVSHSSIEIPGYQSSKSK*VLSNST Trigger: TGTGCTGTTTGACAGAACCCATTTGCTTTTGGAGGA...TTGATATCCAGGAATCTCAATTGAGGAATGGCTCACATAATTTTCACCTGTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR GCA 90 bp | CATGAGTGCACGAGGATAGAAGAGGGCAATGAAAACGAAATAATTGGATTCAGAGCTAAACAAATACCATaGCTTTGGCTTTCTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HECTRIEEGNENEIIGFRAKQIP*LWLSSL Trigger: AAGAGAAGAAAGCCAAAGGCATGGTATTTGTTTAGC...TCTGAATCCAATTATTTCGTTTTCATTGCCCTCTTCTATCCTCGTGCACTCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR TCA 90 bp | TTGTGTCTTAATGATACTGTTTTGTTCAAGTCACCCAATACCTCTGCCACTTATATTCCACCTCAGTATTaGCTCAGAAATGCTTATTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCLNDTVLFKSPNTSATYIPPQY*LRNAYW Trigger: CCAATAAGCATTTCTGAGTCAATACTGAGGTGGAAT...ATAAGTGGCAGAGGTATTGGGTGACTTGAACAAAACAGTATCATTAAGACACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR GCA 90 bp | GTGTTTGCAGTTGTTCATGTCTCCTTGTTAATACTAGGACACTTGATCATGTGCAAACTCGTATTCTCTTaGTGGCATTCTAAAATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VFAVVHVSLLILGHLIMCKLVFS*WHSKIQ Trigger: TTGGATTTTAGAATGCCAGCAAGAGAATACGAGTTT...GCACATGATCAAGTGTCCTAGTATTAACAAGGAGACATGAACAACTGCAAACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR CCA 90 bp | TCTGCCTTTCAATTGAGCAAACTAATGTCATGTACCATCATGTCTGGCTTGATTCAGGTTAGGATTAAATaGTCCAAAGAAAACCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAFQLSKLMSCTIMSGLIQVRIK*SKENLW Trigger: CCAAAGGTTTTCTTTGGACCATTTAATCCTAACCTG...AATCAAGCCAGACATGATGGTACATGACATTAGTTTGCTCAATTGAAAGGCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR CAA 72 bp | GAAGAAGATGGTGGGAAAGATCTTGAAAGTCAAAGTTaGAGGAAGTTGGCTGGGAATACAAATTTTCTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EEDGGKDLESQS*RKLAGNTNFLE Trigger: TTCTAGAAAATTTGTATTCCCAGCCAACTTCCTCAAACTTTGACTTTCAAGATCTTTCCCACCATCTTCTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR TCA 90 bp | TTGTGTCTTAATGATACTGTTTTGTTCAAGTCACCCAATACCTCTGCCACTTATTCAAACAGCACAAGATaGGAGAAAACTTCAGAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LCLNDTVLFKSPNTSATYSNSTR*EKTSET Trigger: TGTTTCTGAAGTTTTCTCTCATCTTGTGCTGTTTGA...ATAAGTGGCAGAGGTATTGGGTGACTTGAACAAAACAGTATCATTAAGACACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR GCA 90 bp | ACCACAGGTGAAAATTATGTGAGCCATTCCTCAATTGAGATTCCTGGATATCAAGTATTGACTCAGAAATaGTTATTGGGTATTTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TTGENYVSHSSIEIPGYQVLTQK*LLGIWK Trigger: CTTCCAAATACCCAATAAGCATTTCTGAGTCAATAC...TTGATATCCAGGAATCTCAATTGAGGAATGGCTCACATAATTTTCACCTGTGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR CAA 72 bp | TGTGTACTTATGAATAAAACCATTTTCCACCAAACTTaGGTACTTAGTATAACAATGGACAGTGCTGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CVLMNKTIFHQT*VLSITMDSAVL Trigger: CAGGACAGCACTGTCCATTGTTATACTAAGTACCAAAGTTTGGTGGAAAATGGTTTTATTCATAAGTACACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| 3UTR CAA 72 bp | GGAAATGGTAAAGGGAATTATGATGACTGTAACCTCTaGCAAAATATTTCCTCATCCAAGTTACACAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GNGKGNYDDCNL*QNISSSKLHRN Trigger: ATTTCTGTGTAACTTGGATGAGGAAATATTTTGCAAGAGGTTACAGTCATCATAATTCCCTTTACCATTTCC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR CAA 90 bp | CTGCCCAGGGCTGACAGGCTAAGGTTAGCACCACCCACATTGGGATGGGTTCTGGTGCCCAAGTATCAATaGCCAGTTTTAAGGATGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LPRADRLRLAPPTLGWVLVPKYQ*PVLRML Trigger: AAGCATCCTTAAAACTGGCAATTGATACTTGGGCAC...CAGAACCCATCCCAATGTGGGTGGTGCTAACCTTAGCCTGTCAGCCCTGGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR CAA 90 bp | CTGCCCAGGGCTGACAGGCTAAGGTTAGCACCACCCACATTGGGATGGGTTCTGGTCTTCCACCATTTTTaGAGACTCTACTTGTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LPRADRLRLAPPTLGWVLVFHHF*RLYLLK Trigger: CTTCAACAAGTAGAGTCTCAAAAAATGGTGGAAGAC...CAGAACCCATCCCAATGTGGGTGGTGCTAACCTTAGCCTGTCAGCCCTGGGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR CAA 90 bp | CTGCCCAGGGCTGACAGGCTAAGGTTAGCACCACCCACATTGGGATGGGTTCTGAATTCCACCTCAGTATaGACTCAGAAATGCTTATTG | + |
|
Preference number: 5 (lower is better) Translates to: LPRADRLRLAPPTLGWVLNSTSV*TQKCLL Trigger: CAATAAGCATTTCTGAGTCAATACTGAGGTGGAATT...CAGAACCCATCCCAATGTGGGTGGTGCTAACCTTAGCCTGTCAGCCCTGGGCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS CCA 90 bp | AGTGAAGCATCAAGGAGACCATGCCATGGGACAAATGTGTGTCCTTaGTGGCTATCTGATGGACATTGGGAAAACGGTCATGGTCACTCA | + |
|
Preference number: 5 (lower is better) Translates to: SEASRRPCHGTNVCP*WLSDGHWENGHGHS Trigger: TGAGTGACCATGACCGTTTTCCCAATGTCCATCAGATAGCCACCAAGGACACACATTTGTCCCATGGCATGGTCTCCTTGATGCTTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS GCA 90 bp | GTTGGCATATTTATCGTCTGGACACCTCACACACTGTTCCATATCTaGTGTTTCATTGGAAACCTCATTTTCTGGGCACTGAACACAATC | + |
|
Preference number: 5 (lower is better) Translates to: VGIFIVWTPHTLFHI*CFIGNLIFWALNTI Trigger: GATTGTGTTCAGTGCCCAGAAAATGAGGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTGAGGTGTCCAGACGATAAATATGCCAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR CAA 90 bp | GACAAAACCACAGGTGAAAATTATGTGAGCCATTCCTCAATTGAGATTCCTGGAATGTCACACTGCACATaGAGGAGGGTACTGATGTTC | + |
|
Preference number: 5 (lower is better) Translates to: DKTTGENYVSHSSIEIPGMSHCT*RRVLMF Trigger: GAACATCAGTACCCTCCTCAATGTGCAGTGTGACAT...TCCAGGAATCTCAATTGAGGAATGGCTCACATAATTTTCACCTGTGGTTTTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS GCA 90 bp | GGAAACCTCATTTTCTGGGCACTGAACACAATCAAAGCAGCAGTCTaGTGTTTCTTTCTGATGAATTTTCCTGAATCCAGCAGTACATGT | + |
|
Preference number: 5 (lower is better) Translates to: GNLIFWALNTIKAAV*CFFLMNFPESSSTC Trigger: ACATGTACTGCTGGATTCAGGAAAATTCATCAGAAAGAAACAGCAGACTGCTGCTTTGATTGTGTTCAGTGCCCAGAAAATGAGGTTTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS CCA 90 bp | ATGGACATTGGGAAAACGGTCATGGTCACTCAGGTTAGGATTAAATaGTCCAAAGAAAACCTTTGGTGCCCAAGTATCAATTGCCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: MDIGKTVMVTQVRIK*SKENLWCPSINCQF Trigger: AAACTGGCAATTGATACTTGGGCACCAAAGGTTTTCTTTGGACCATTTAATCCTAACCTGAGTGACCATGACCGTTTTCCCAATGTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS GCA 90 bp | TCCAAGGCCTTGTGGAAAATTCCAAATGATGAAAATGTCATACTCTaGACACTGATATTCCCTATGATTCATATCCACCAGTTCTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SKALWKIPNDENVIL*TLIFPMIHIHQFSN Trigger: GTTGGAGAACTGGTGGATATGAATCATAGGGAATATCAGTGTGCAGAGTATGACATTTTCATCATTTGGAATTTTCCACAAGGCCTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR CAA 90 bp | TCTGCCTTTCAATTGAGCAAACTAATGTCATGTACCATCATGTCTGGCTTGATTGTCCAAAGAAAACCTTaGGTGCCCAAGTATCAATTG | + |
|
Preference number: 5 (lower is better) Translates to: SAFQLSKLMSCTIMSGLIVQRKP*VPKYQL Trigger: CAATTGATACTTGGGCACCAAAGGTTTTCTTTGGAC...AATCAAGCCAGACATGATGGTACATGACATTAGTTTGCTCAATTGAAAGGCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR CAA 90 bp | CATGTCTCCTTGTTAATACTAGGACACTTGATCATGTGCAGATCTTATGAATGCTTGGAGGCAGTGAGTTaGCTCTATGTTGGCATATTT | + |
|
Preference number: 5 (lower is better) Translates to: HVSLLILGHLIMCRSYECLEAVS*LYVGIF Trigger: AAATATGCCAACATAGAGCAAACTCACTGCCTCCAA...GCATTCATAAGATCTGCACATGATCAAGTGTCCTAGTATTAACAAGGAGACATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
||
| CDS-3UTR CAA 90 bp | GTGTTTGCAGTTGTTCATGTCTCCTTGTTAATACTAGGACACTTGATCATGTGCATGCTTATTGGGTATTaGGAAGTGTTCATTGTTTGC | + |
|
Preference number: 5 (lower is better) Translates to: VFAVVHVSLLILGHLIMCMLIGY*EVFIVC Trigger: GCAAACAATGAACACTTCCAAATACCCAATAAGCAT...GCACATGATCAAGTGTCCTAGTATTAACAAGGAGACATGAACAACTGCAAACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
||
| CDS-3UTR CAA 90 bp | CATGTCTCCTTGTTAATACTAGGACACTTGATCATGTGCAGATCTTATGAATGCAGATATATGAAGTTGTaGACTCTGTGGGAAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HVSLLILGHLIMCRSYECRYMKL*TLWETR Trigger: CCTTGTTTCCCACAGAGTCAACAACTTCATATATCT...GCATTCATAAGATCTGCACATGATCAAGTGTCCTAGTATTAACAAGGAGACATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS-3UTR CAA 90 bp | GACAAAACCACAGGTGAAAATTATGTGAGCCATTCCTCAATTGAGATTCCTGGATTCAGATATATGAAGTaGTTGACTCTGTGGGAAACA | + |
|
Preference number: 5 (lower is better) Translates to: DKTTGENYVSHSSIEIPGFRYMK*LTLWET Trigger: TGTTTCCCACAGAGTCAACAACTTCATATATCTGAA...TCCAGGAATCTCAATTGAGGAATGGCTCACATAATTTTCACCTGTGGTTTTGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
||
| CDS-3UTR CAA 90 bp | TCTGCCTTTCAATTGAGCAAACTAATGTCATGTACCATCATGTCTGGCTTGATTTTGAGACTCTACTTGTaGAAGAATGTGTTCATGGTA | + |
|
Preference number: 5 (lower is better) Translates to: SAFQLSKLMSCTIMSGLILRLYL*KNVFMV Trigger: TACCATGAACACATTCTTCAACAAGTAGAGTCTCAA...AATCAAGCCAGACATGATGGTACATGACATTAGTTTGCTCAATTGAAAGGCAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
||
| CDS-3UTR CAA 90 bp | TTGTGTCTTAATGATACTGTTTTGTTCAAGTCACCCAATACCTCTGCCACTTATACTCAGAAATGCTTATaGGGTATTTGGAAGTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LCLNDTVLFKSPNTSATYTQKCL*GIWKCS Trigger: TGAACACTTCCAAATACCCAATAAGCATTTCTGAGT...ATAAGTGGCAGAGGTATTGGGTGACTTGAACAAAACAGTATCATTAAGACACAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
||
| CDS TCA 72 bp | ATGCCATGGGACAAATGTGTGTCCTTGGTGGCTATCTaGTGGACATTGGGAAAACGGTCATGGTCACTCAGG | + |
|
Preference number: 6 (lower is better) Translates to: MPWDKCVSLVAI*WTLGKRSWSLR Trigger: CCTGAGTGACCATGACCGTTTTCCCAATGTCCATCAGATAGCCACCAAGGACACACATTTGTCCCATGGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
||
| CDS TCA 72 bp | CAGAGCCATCCCCAATGGATCTTCATAAGCCAGAAATaGCACAGCTCTTTGGAGGCAGTGAGTTTGCTCTAT | + |
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Preference number: 6 (lower is better) Translates to: QSHPQWIFISQK*HSSLEAVSLLY Trigger: ATAGAGCAAACTCACTGCCTCCAAAGAGCTGTGTCATTTCTGGCTTATGAAGATCCATTGGGGATGGCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS CCA 72 bp | CCCTGTCATCATCATCATCCCTCTCATCCTTCTTCCTaGAGTAGTGAGCTTGAAAGCCATGACCACAGTTAT | + |
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Preference number: 6 (lower is better) Translates to: PCHHHHPSHPSS*SSELESHDHSY Trigger: ATAACTGTGGTCATGGCTTTCAAGCTCACTACTCCAGGAAGAAGGATGAGAGGGATGATGATGATGACAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS GCA 72 bp | TTTATCGTCTGGACACCTCACACACTGTTCCATATCTaGTGTTTCATTGGAAACCTCATTTTCTGGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: FIVWTPHTLFHI*CFIGNLIFWAL Trigger: CAGTGCCCAGAAAATGAGGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTGAGGTGTCCAGACGATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS CCA 72 bp | GCAGTGAGTTTGCTCTATGTTGGCATATTTATCGTCTaGACACCTCACACACTGTTCCATATCTGCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: AVSLLYVGIFIV*TPHTLFHICCF Trigger: GAAACAGCAGATATGGAACAGTGTGTGAGGTGTCCAGACGATAAATATGCCAACATAGAGCAAACTCACTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS CCA 72 bp | GGGAAAACGGTCATGGTCACTCAGGTTAGGATTAAATaGTCCAAAGAAAACCTTTGGTGCCCAAGTATCAAT | + |
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Preference number: 6 (lower is better) Translates to: GKTVMVTQVRIK*SKENLWCPSIN Trigger: ATTGATACTTGGGCACCAAAGGTTTTCTTTGGACCATTTAATCCTAACCTGAGTGACCATGACCGTTTTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS CCA 72 bp | GACACCTCACACACTGTTCCATATCTGCTGTTTCATTaGAAACCTCATTTTCTGGGCACTGAACACAATCAA | + |
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Preference number: 6 (lower is better) Translates to: DTSHTVPYLLFH*KPHFLGTEHNQ Trigger: TTGATTGTGTTCAGTGCCCAGAAAATGAGGTTTCCAATGAAACAGCAGATATGGAACAGTGTGTGAGGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS CAA 72 bp | ATGGTCCAAAGAAAACCTTTGGTGCCCAAGTATCAATaGCCAGTTTTAAGGATGCTTTCCATGATGGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: MVQRKPLVPKYQ*PVLRMLSMMVL Trigger: CAGGACCATCATGGAAAGCATCCTTAAAACTGGCAATTGATACTTGGGCACCAAAGGTTTTCTTTGGACCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS GCA 72 bp | ATTTTCTGGGCACTGAACACAATCAAAGCAGCAGTCTaGTGTTTCTTTCTGATGAATTTTCCTGAATCCAGC | + |
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Preference number: 6 (lower is better) Translates to: IFWALNTIKAAV*CFFLMNFPESS Trigger: GCTGGATTCAGGAAAATTCATCAGAAAGAAACAGCAGACTGCTGCTTTGATTGTGTTCAGTGCCCAGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS CAA 90 bp | CAACTGCTGACATTCTGTGTACTTTCCTTTGTCTTCCACCATTTTTaGAGACTCTACTTGTTGAAGAATGTGTTCATGGTAAGTGTGGGC | + |
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Preference number: 6 (lower is better) Translates to: QLLTFCVLSFVFHHF*RLYLLKNVFMVSVG Trigger: GCCCACACTTACCATGAACACATTCTTCAACAAGTAGAGTCTCAAAAAATGGTGGAAGACAAAGGAAAGTACACAGAATGTCAGCAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS TCA 72 bp | ATAACATCCCATTGTGAGGTTGTGATCCAGATCCTCTaGGCACCTAAATATACCCATCTTCTAAAGCTAATT | + |
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Preference number: 6 (lower is better) Translates to: ITSHCEVVIQIL*APKYTHLLKLI Trigger: AATTAGCTTTAGAAGATGGGTATATTTAGGTGCTCAGAGGATCTGGATCACAACCTCACAATGGGATGTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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| CDS CAA 72 bp | AGAATGCAGTTATTGGCCTTCACAATGGGAGTATCCTaGTACTTCACAAAAGTGACTAGTACTAGAATTGTG | + |
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Preference number: 6 (lower is better) Translates to: RMQLLAFTMGVS*YFTKVTSTRIV Trigger: CACAATTCTAGTACTAGTCACTTTTGTGAAGTACAAGGATACTCCCATTGTGAAGGCCAATAACTGCATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171811.4 |
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