Pregenerated sensors for VMN2R81 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000055515Ensembl transcript IDs: ENSMUST00000020547.10
Found 94 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGACATCCTCATGGAGACAGGGTAGGAGGTGTGGAATGTGGAACTaGCAGAGAATGGACTATGAGGGGGATAAAATCTGTACTGAAAAA | + |
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Preference number: 1 (lower is better) Translates to: ETSSWRQGRRCGMWN*QRMDYEGDKICTEK Trigger: TTTTTCAGTACAGATTTTATCCCCCTCATAGTCCATTCTCTGTCAGTTCCACATTCCACACCTCCTACCCTGTCTCCATGAGGATGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| 3UTR-3UTR GCA 90 bp | TGGACTCCAGAGATCTCAGACACTGAGCTACAAACCAGGCAGCATACACTAGCTAGGATCCAGGGAGTGTaGAGGTTTGTTGGGGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: WTPEISDTELQTRQHTLARIQGV*RFVGVE Trigger: CTCCACCCCAACAAACCTGCACACTCCCTGGATCCT...AGCTAGTGTATGCTGCCTGGTTTGTAGCTCAGTGTCTGAGATCTCTGGAGTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| 3UTR-3UTR TCA 90 bp | TCCAGGGAGTGTGCAGGTTTGTTGGGGTGGAGGATTCTGGGATGGAGACATCCTAGGAATATTGTGGTATaGAGTTTAACGTGGCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: SRECAGLLGWRILGWRHPRNIVV*SLTWQS Trigger: TGACTGCCACGTTAAACTTCATACCACAATATTCCT...AGGATGTCTCCATCCCAGAATCCTCCACCCCAACAAACCTGCACACTCCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| 3UTR-3UTR CCA 90 bp | TCCAGGGAGTGTGCAGGTTTGTTGGGGTGGAGGATTCTGGGATGGAGACATCCTTTACTTATTTCAGCATaGCATTCTAGGGAATCAAGC | + |
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Preference number: 2 (lower is better) Translates to: SRECAGLLGWRILGWRHPLLISA*HSRESS Trigger: GCTTGATTCCCTAGAATGCCATGCTGAAATAAGTAA...AGGATGTCTCCATCCCAGAATCCTCCACCCCAACAAACCTGCACACTCCCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| 3UTR-3UTR CCA 90 bp | GAAGACTGTTGGGGATGGACTCTGAAGATACACCTAATCCTCAAAGAACAGGAGATGGAGACATCCTCATaGAGACAGGGTAGGAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: EDCWGWTLKIHLILKEQEMETSS*RQGRRC Trigger: ACACCTCCTACCCTGTCTCCATGAGGATGTCTCCAT...CTCCTGTTCTTTGAGGATTAGGTGTATCTTCAGAGTCCATCCCCAACAGTCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| 3UTR-3UTR CCA 90 bp | ACATATGCAGCAGAAGACTGTTGGGGATGGACTCTGAAGATACACCTAATCCTCAGTGTGCAGGTTTGTTaGGGTGGAGGATTCTGGGAT | + |
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Preference number: 2 (lower is better) Translates to: TYAAEDCWGWTLKIHLILSVQVC*GGGFWD Trigger: ATCCCAGAATCCTCCACCCCAACAAACCTGCACACT...GAGGATTAGGTGTATCTTCAGAGTCCATCCCCAACAGTCTTCTGCTGCATATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| 3UTR-3UTR TCA 90 bp | ACATATGCAGCAGAAGACTGTTGGGGATGGACTCTGAAGATACACCTAATCCTCTGTGGAATGTGGAACTaGCAGAGAATGGACTATGAG | + |
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Preference number: 2 (lower is better) Translates to: TYAAEDCWGWTLKIHLILCGMWN*QRMDYE Trigger: CTCATAGTCCATTCTCTGTCAGTTCCACATTCCACA...GAGGATTAGGTGTATCTTCAGAGTCCATCCCCAACAGTCTTCTGCTGCATATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| 3UTR-3UTR CCA 90 bp | GAAGACTGTTGGGGATGGACTCTGAAGATACACCTAATCCTCAAAGAACAGGAGGGAACTGACAGAGAATaGACTATGAGGGGGATAAAA | + |
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Preference number: 2 (lower is better) Translates to: EDCWGWTLKIHLILKEQEGTDRE*TMRGIK Trigger: TTTTATCCCCCTCATAGTCCATTCTCTGTCAGTTCC...CTCCTGTTCTTTGAGGATTAGGTGTATCTTCAGAGTCCATCCCCAACAGTCTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| 3UTR CCA 72 bp | GAGTGTGCAGGTTTGTTGGGGTGGAGGATTCTGGGATaGAGACATCCTCATGGAGACAGGGTAGGAGGTGTG | + |
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Preference number: 3 (lower is better) Translates to: ECAGLLGWRILG*RHPHGDRVGGV Trigger: CACACCTCCTACCCTGTCTCCATGAGGATGTCTCCATCCCAGAATCCTCCACCCCAACAAACCTGCACACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| 3UTR CCA 72 bp | GTGTCCCTGTTGGAGAACCAGCAATCTCAACTAAGCTaGACTCCAGAGATCTCAGACACTGAGCTACAAACC | + |
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Preference number: 3 (lower is better) Translates to: VSLLENQQSQLS*TPEISDTELQT Trigger: GGTTTGTAGCTCAGTGTCTGAGATCTCTGGAGTCCAGCTTAGTTGAGATTGCTGGTTCTCCAACAGGGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| 3UTR TCA 72 bp | TCATGGAGACAGGGTAGGAGGTGTGGAATGTGGAACTaGCAGAGAATGGACTATGAGGGGGATAAAATCTGT | + |
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Preference number: 3 (lower is better) Translates to: SWRQGRRCGMWN*QRMDYEGDKIC Trigger: ACAGATTTTATCCCCCTCATAGTCCATTCTCTGTCAGTTCCACATTCCACACCTCCTACCCTGTCTCCATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| 3UTR CCA 72 bp | ATCCTCAACACATATGCAGCAGAAGACTGTTGGGGATaGACTCTGAAGATACACCTAATCCTCAAAGAACAG | + |
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Preference number: 3 (lower is better) Translates to: ILNTYAAEDCWG*TLKIHLILKEQ Trigger: CTGTTCTTTGAGGATTAGGTGTATCTTCAGAGTCCATCCCCAACAGTCTTCTGCTGCATATGTGTTGAGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| 3UTR CCA 72 bp | TATGAGATCCTCAACACATATGCAGCAGAAGACTGTTaGGGATGGACTCTGAAGATACACCTAATCCTCAAA | + |
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Preference number: 3 (lower is better) Translates to: YEILNTYAAEDC*GWTLKIHLILK Trigger: TTTGAGGATTAGGTGTATCTTCAGAGTCCATCCCCAACAGTCTTCTGCTGCATATGTGTTGAGGATCTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| 3UTR-3UTR CAA 90 bp | ACATATGCAGCAGAAGACTGTTGGGGATGGACTCTGAAGATACACCTAATCCTCCGACAGTCAAACTGGTaGAGATCTAGAAAAATTCAA | + |
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Preference number: 3 (lower is better) Translates to: TYAAEDCWGWTLKIHLILRQSNW*RSRKIQ Trigger: TTGAATTTTTCTAGATCTCAACCAGTTTGACTGTCG...GAGGATTAGGTGTATCTTCAGAGTCCATCCCCAACAGTCTTCTGCTGCATATGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | TCCAGGGAGTGTGCAGGTTTGTTGGGGTGGAGGATTCTGGGATGGAGACATCCTCCAGGACAACTTTCCTaGATCCAGGATTGCAGCTCT | + |
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Preference number: 4 (lower is better) Translates to: SRECAGLLGWRILGWRHPPGQLS*IQDCSS Trigger: AGAGCTGCAATCCTGGATTCAGGAAAGTTGTCCTGG...AGGATGTCTCCATCCCAGAATCCTCCACCCCAACAAACCTGCACACTCCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR CCA 90 bp | GGAGACAGGGTAGGAGGTGTGGAATGTGGAACTGACAGAGAATGGACTATGAGGATAGAGCTGTGTCTTTaGGGGCCACCTGGTAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: GDRVGGVECGTDREWTMRIELCL*GPPGRE Trigger: CTCTCTACCAGGTGGCCCCCAAAGACACAGCTCTAT...CCTCATAGTCCATTCTCTGTCAGTTCCACATTCCACACCTCCTACCCTGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR CCA 90 bp | GGAGACAGGGTAGGAGGTGTGGAATGTGGAACTGACAGAGAATGGACTATGAGGCCCCTTTGGGAGCACTaGGAACAAATGTACCCACTT | + |
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Preference number: 4 (lower is better) Translates to: GDRVGGVECGTDREWTMRPLWEH*EQMYPL Trigger: AAGTGGGTACATTTGTTCCCAGTGCTCCCAAAGGGG...CCTCATAGTCCATTCTCTGTCAGTTCCACATTCCACACCTCCTACCCTGTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | GATTCTGGGATGGAGACATCCTCATGGAGACAGGGTAGGAGGTGTGGAATGTGGTATTTGGAAGGCCAATaGAGAGCAATGGACAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: DSGMETSSWRQGRRCGMWYLEGQ*RAMDRG Trigger: TCCTCTGTCCATTGCTCTTCATTGGCCTTCCAAATA...CCACATTCCACACCTCCTACCCTGTCTCCATGAGGATGTCTCCATCCCAGAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | AGGATTCTGGGATGGAGACATCCTCATGGAGACAGGGTAGGAGGTGTGGAATGTAAGTCTGATAGAAACTaGGCACCTCTCTGGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: RILGWRHPHGDRVGGVECKSDRN*APLWSS Trigger: AGATGACCAGAGAGGTGCTCAGTTTCTATCAGACTT...ACATTCCACACCTCCTACCCTGTCTCCATGAGGATGTCTCCATCCCAGAATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | GATTCTGGGATGGAGACATCCTCATGGAGACAGGGTAGGAGGTGTGGAATGTGGCTCCTTATAATGAGGTaGAAAAATCAGAGCCCCATG | + |
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Preference number: 4 (lower is better) Translates to: DSGMETSSWRQGRRCGMWLLIMR*KNQSPM Trigger: CATGGGGCTCTGATTTTTTCACCTCATTATAAGGAG...CCACATTCCACACCTCCTACCCTGTCTCCATGAGGATGTCTCCATCCCAGAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | GTGTCCCTGTTGGAGAACCAGCAATCTCAACTAAGCTGGACTCCAGAGATCTCATTCTTCAGAAAAGGGTaGAGCTGCCAGGGGAATAAC | + |
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Preference number: 4 (lower is better) Translates to: VSLLENQQSQLSWTPEISFFRKG*SCQGNN Trigger: GTTATTCCCCTGGCAGCTTCACCCTTTTCTGAAGAA...TGAGATCTCTGGAGTCCAGCTTAGTTGAGATTGCTGGTTCTCCAACAGGGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | GATTCTGGGATGGAGACATCCTCATGGAGACAGGGTAGGAGGTGTGGAATGTGGTCAGTGCATACAGAGTaGGGAATCTCTGTAAATCCT | + |
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Preference number: 4 (lower is better) Translates to: DSGMETSSWRQGRRCGMWSVHTE*GISVNP Trigger: AGGATTTACAGAGATTCCTCACTCTGTATGCACTGA...CCACATTCCACACCTCCTACCCTGTCTCCATGAGGATGTCTCCATCCCAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | GGTGTGGAATGTGGAACTGACAGAGAATGGACTATGAGGGGGATAAAATCTGTAAACTCCCAAAGGCCATaGCTCCCAGGTAAGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: GVECGTDREWTMRGIKSVNSQRP*LPGKPE Trigger: CTCTGGCTTACCTGGGAGTCATGGCCTTTGGGAGTT...TACAGATTTTATCCCCCTCATAGTCCATTCTCTGTCAGTTCCACATTCCACACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR CCA 90 bp | TCCAGGGAGTGTGCAGGTTTGTTGGGGTGGAGGATTCTGGGATGGAGACATCCTAAAGTTTTGCTCCTGTaGTGTCTTTTATCCCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: SRECAGLLGWRILGWRHPKVLLL*CLLSLL Trigger: CAACAGGGATAAAAGACACCACAGGAGCAAAACTTT...AGGATGTCTCCATCCCAGAATCCTCCACCCCAACAAACCTGCACACTCCCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | GAAGATACACCTAATCCTCAAAGAACAGGAGGATCCAGGGAGTGTGCAGGTTTGCCACCCAGTTCCAGTTaGAATGAAGCATCAAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: EDTPNPQRTGGSRECAGLPPSSS*NEASKR Trigger: CCTCTTTGATGCTTCATTTCAACTGGAACTGGGTGG...CAAACCTGCACACTCCCTGGATCCTCCTGTTCTTTGAGGATTAGGTGTATCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | GGAGGTGTGGAATGTGGAACTGACAGAGAATGGACTATGAGGGGGATAAAATCTCAATGGAAAGAAGTGTaGTTCCCTTCCCCAGGGGAT | + |
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Preference number: 4 (lower is better) Translates to: GGVECGTDREWTMRGIKSQWKEV*FPSPGD Trigger: ATCCCCTGGGGAAGGGAATCACACTTCTTTCCATTG...AGATTTTATCCCCCTCATAGTCCATTCTCTGTCAGTTCCACATTCCACACCTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR CCA 90 bp | TCCAGGGAGTGTGCAGGTTTGTTGGGGTGGAGGATTCTGGGATGGAGACATCCTGTTCCTTCCAATAGCTaGCAGATTATAAATCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: SRECAGLLGWRILGWRHPVPSNS*QIINLK Trigger: CTTGAGATTTATAATCTGCCAGCTATTGGAAGGAAC...AGGATGTCTCCATCCCAGAATCCTCCACCCCAACAAACCTGCACACTCCCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR CCA 90 bp | GATTCTGGGATGGAGACATCCTCATGGAGACAGGGTAGGAGGTGTGGAATGTGGGGTAATATCATACTCTaGATCTGCCTTCCTTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: DSGMETSSWRQGRRCGMWGNIIL*ICLPFP Trigger: TGGAAAAGGAAGGCAGATCCAGAGTATGATATTACC...CCACATTCCACACCTCCTACCCTGTCTCCATGAGGATGTCTCCATCCCAGAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR CCA 90 bp | TGGACTCCAGAGATCTCAGACACTGAGCTACAAACCAGGCAGCATACACTAGCTACAATTGTTCCCCTTTaGGAGCACTGGGAACAAATG | + |
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Preference number: 4 (lower is better) Translates to: WTPEISDTELQTRQHTLATIVPL*EHWEQM Trigger: CATTTGTTCCCAGTGCTCCCAAAGGGGAACAATTGT...AGCTAGTGTATGCTGCCTGGTTTGTAGCTCAGTGTCTGAGATCTCTGGAGTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | GTGTCCCTGTTGGAGAACCAGCAATCTCAACTAAGCTGGACTCCAGAGATCTCACAGTTCCAGTTGAAATaGAGCATCAAAGAGGCAATA | + |
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Preference number: 4 (lower is better) Translates to: VSLLENQQSQLSWTPEISQFQLK*SIKEAI Trigger: TATTGCCTCTTTGATGCTTCATTTCAACTGGAACTG...TGAGATCTCTGGAGTCCAGCTTAGTTGAGATTGCTGGTTCTCCAACAGGGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | GGATGGACTCTGAAGATACACCTAATCCTCAAAGAACAGGAGGATCCAGGGAGTAAGAGCTGTGAGTGTTaGGAATCCAATGGAAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: GWTLKIHLILKEQEDPGSKSCEC*ESNGKK Trigger: CTTCTTTCCATTGGATTCTCAACACTCACAGCTCTT...ACTCCCTGGATCCTCCTGTTCTTTGAGGATTAGGTGTATCTTCAGAGTCCATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | GAGATCTCAGACACTGAGCTACAAACCAGGCAGCATACACTAGCTAATATGAGATGGATAGGGCCACAGTaGACAGAAGTCCAAACATGT | + |
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Preference number: 4 (lower is better) Translates to: EISDTELQTRQHTLANMRWIGPQ*TEVQTC Trigger: ACATGTTTGGACTTCTGTTCACTGTGGCCCTATCCA...TCTCATATTAGCTAGTGTATGCTGCCTGGTTTGTAGCTCAGTGTCTGAGATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | GAGAACCAGCAATCTCAACTAAGCTGGACTCCAGAGATCTCAGACACTGAGCTAAAATTTAGGGACCTGTaGTGTCAGCAACCACCTTAT | + |
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Preference number: 4 (lower is better) Translates to: ENQQSQLSWTPEISDTELKFRDL*CQQPPY Trigger: ATAAGGTGGTTGCTGACATCACAGGTCCCTAAATTT...TAGCTCAGTGTCTGAGATCTCTGGAGTCCAGCTTAGTTGAGATTGCTGGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR GCA 90 bp | ATGGACTCTGAAGATACACCTAATCCTCAAAGAACAGGAGGATCCAGGGAGTGTGATTGCAGCTCTCAGTaGATACAGAGTGAGGAATCT | + |
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Preference number: 4 (lower is better) Translates to: MDSEDTPNPQRTGGSRECDCSSQ*IQSEES Trigger: AGATTCCTCACTCTGTATGCACTGAGAGCTGCAATC...ACACTCCCTGGATCCTCCTGTTCTTTGAGGATTAGGTGTATCTTCAGAGTCCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | ATGGACTCTGAAGATACACCTAATCCTCAAAGAACAGGAGGATCCAGGGAGTGTTGGTTTCTATCAATCTaGACAGGATCAAAAGGCCCA | + |
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Preference number: 4 (lower is better) Translates to: MDSEDTPNPQRTGGSRECWFLSI*TGSKGP Trigger: TGGGCCTTTTGATCCTGTTCAGATTGATAGAAACCA...ACACTCCCTGGATCCTCCTGTTCTTTGAGGATTAGGTGTATCTTCAGAGTCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | ACATATGCAGCAGAAGACTGTTGGGGATGGACTCTGAAGATACACCTAATCCTCGAAATTGTATTTGACTaGGTGTCTCCTCATGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: TYAAEDCWGWTLKIHLILEIVFD*VSPHAD Trigger: GTCTGCATGAGGAGACACTCAGTCAAATACAATTTC...GAGGATTAGGTGTATCTTCAGAGTCCATCCCCAACAGTCTTCTGCTGCATATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR CCA 90 bp | GAAGATACACCTAATCCTCAAAGAACAGGAGGATCCAGGGAGTGTGCAGGTTTGCCAAACCTGTTTCATTaGAAATCTCATTATCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: EDTPNPQRTGGSRECAGLPNLFH*KSHYLG Trigger: GCCCAGATAATGAGATTTCCAATGAAACAGGTTTGG...CAAACCTGCACACTCCCTGGATCCTCCTGTTCTTTGAGGATTAGGTGTATCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR CCA 90 bp | GGAGGTGTGGAATGTGGAACTGACAGAGAATGGACTATGAGGGGGATAAAATCTCCTTATCTTTCTTCCTaGAGCAGTAATCTTGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: GGVECGTDREWTMRGIKSPYLSS*SSNLEG Trigger: GCCTTCAAGATTACTGCTCCAGGAAGAAAGATAAGG...AGATTTTATCCCCCTCATAGTCCATTCTCTGTCAGTTCCACATTCCACACCTCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR CCA 90 bp | GAAGACTGTTGGGGATGGACTCTGAAGATACACCTAATCCTCAAAGAACAGGAGTATCAGTGTGCAGATTaGAATGGCAAATTTAGGGAC | + |
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Preference number: 4 (lower is better) Translates to: EDCWGWTLKIHLILKEQEYQCAD*NGKFRD Trigger: GTCCCTAAATTTGCCATTCCAATCTGCACACTGATA...CTCCTGTTCTTTGAGGATTAGGTGTATCTTCAGAGTCCATCCCCAACAGTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | GAAGACTGTTGGGGATGGACTCTGAAGATACACCTAATCCTCAAAGAACAGGAGAGTAAGTGTAGCAGCTaGATTGCTTTCTTTTCTACA | + |
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Preference number: 4 (lower is better) Translates to: EDCWGWTLKIHLILKEQESKCSS*IAFFST Trigger: TGTAGAAAAGAAAGCAATTCAGCTGCTACACTTACT...CTCCTGTTCTTTGAGGATTAGGTGTATCTTCAGAGTCCATCCCCAACAGTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | GTGGAATGTGGAACTGACAGAGAATGGACTATGAGGGGGATAAAATCTGTACTGTTCAGATGTTTTCCATaGTACTCCAGTAAGTGTAGC | + |
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Preference number: 4 (lower is better) Translates to: VECGTDREWTMRGIKSVLFRCFP*YSSKCS Trigger: GCTACACTTACTGGAGTATCATGGAAAACATCTGAA...CAGTACAGATTTTATCCCCCTCATAGTCCATTCTCTGTCAGTTCCACATTCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR TCA 90 bp | GTGGAATGTGGAACTGACAGAGAATGGACTATGAGGGGGATAAAATCTGTACTGCATATATTCAGACATTaGCAATTGTTCCCCTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: VECGTDREWTMRGIKSVLHIFRH*QLFPFG Trigger: CCCAAAGGGGAACAATTGTCAATGTCTGAATATATG...CAGTACAGATTTTATCCCCCTCATAGTCCATTCTCTGTCAGTTCCACATTCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR GCA 90 bp | ATGGACTCTGAAGATACACCTAATCCTCAAAGAACAGGAGGATCCAGGGAGTGTTCCAAAGAGGCATTCTaGAGACAGTTTTCAAATATT | + |
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Preference number: 4 (lower is better) Translates to: MDSEDTPNPQRTGGSRECSKEAF*RQFSNI Trigger: AATATTTGAAAACTGTCTGCAGAATGCCTCTTTGGA...ACACTCCCTGGATCCTCCTGTTCTTTGAGGATTAGGTGTATCTTCAGAGTCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR CCA 90 bp | GAAGACTGTTGGGGATGGACTCTGAAGATACACCTAATCCTCAAAGAACAGGAGGTGTTTGGTAAAATATaGGAGTTCAAGTTGATCTCA | + |
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Preference number: 4 (lower is better) Translates to: EDCWGWTLKIHLILKEQEVFGKI*EFKLIS Trigger: TGAGATCAACTTGAACTCCCATATTTTACCAAACAC...CTCCTGTTCTTTGAGGATTAGGTGTATCTTCAGAGTCCATCCCCAACAGTCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR CCA 90 bp | ATAGTGTGTGAAATTTGTTACTTATTTCAGCATGGCATTCTAGGGAATCAAGCTACACGTTGCTGTATTTaGAAGGCCAATGAAGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: IVCEICYLFQHGILGNQATRCCI*KANEEQ Trigger: TTGCTCTTCATTGGCCTTCCAAATACAGCAACGTGT...AGCTTGATTCCCTAGAATGCCATGCTGAAATAAGTAACAAATTTCACACACTAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR CCA 90 bp | ATAGTGTGTGAAATTTGTTACTTATTTCAGCATGGCATTCTAGGGAATCAAGCTGTATTTTGTGTCAGTTaGGCAGATATGAGTTGCAAT | + |
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Preference number: 4 (lower is better) Translates to: IVCEICYLFQHGILGNQAVFCVS*ADMSCN Trigger: ATTGCAACTCATATCTGCCCAACTGACACAAAATAC...AGCTTGATTCCCTAGAATGCCATGCTGAAATAAGTAACAAATTTCACACACTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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| CDS-3UTR CAA 90 bp | GGAGACAGGGTAGGAGGTGTGGAATGTGGAACTGACAGAGAATGGACTATGAGGAAGCAACAGGTAGGCTaGCTCTCCAGGACAACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GDRVGGVECGTDREWTMRKQQVG*LSRTTF Trigger: GAAAGTTGTCCTGGAGAGCAAGCCTACCTGTTGCTT...CCTCATAGTCCATTCTCTGTCAGTTCCACATTCCACACCTCCTACCCTGTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS-3UTR CAA 90 bp | GATTCTGGGATGGAGACATCCTCATGGAGACAGGGTAGGAGGTGTGGAATGTGGGTTGCATTATACACGTaGCTGTATTTGGAAGGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: DSGMETSSWRQGRRCGMWVALYT*LYLEGQ Trigger: TTGGCCTTCCAAATACAGCAACGTGTATAATGCAAC...CCACATTCCACACCTCCTACCCTGTCTCCATGAGGATGTCTCCATCCCAGAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS-3UTR CAA 90 bp | GGAGACAGGGTAGGAGGTGTGGAATGTGGAACTGACAGAGAATGGACTATGAGGTGCCTGTGGTTGAAATaGTATTTGACTGAGTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GDRVGGVECGTDREWTMRCLWLK*YLTECL Trigger: GAGACACTCAGTCAAATACAATTTCAACCACAGGCA...CCTCATAGTCCATTCTCTGTCAGTTCCACATTCCACACCTCCTACCCTGTCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS-3UTR CAA 90 bp | GATTCTGGGATGGAGACATCCTCATGGAGACAGGGTAGGAGGTGTGGAATGTGGGGGAAATTCCAAATGTaGGTAATATCATACTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DSGMETSSWRQGRRCGMWGKFQM*VISYSG Trigger: TCCAGAGTATGATATTACCAACATTTGGAATTTCCC...CCACATTCCACACCTCCTACCCTGTCTCCATGAGGATGTCTCCATCCCAGAATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS-3UTR CAA 90 bp | GAGAACCAGCAATCTCAACTAAGCTGGACTCCAGAGATCTCAGACACTGAGCTAGGTATTTTGTGTCAGTaGGGCAGATATGAGTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ENQQSQLSWTPEISDTELGILCQ*GRYELQ Trigger: TTGCAACTCATATCTGCCCAACTGACACAAAATACC...TAGCTCAGTGTCTGAGATCTCTGGAGTCCAGCTTAGTTGAGATTGCTGGTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS GCA 90 bp | ACCTGTTGGGAAATTCCAAATGTTGGTAATATCATACTCTGGATCTaGCTTCCTTTTCCAGTCCAGAACCACGTGGTCCCCAACAGAATT | + |
|
Preference number: 5 (lower is better) Translates to: TCWEIPNVGNIILWI*LPFPVQNHVVPNRI Trigger: AATTCTGTTGGGGACCACGTGGTTCTGGACTGGAAAAGGAAGGCAGATCCAGAGTATGATATTACCAACATTTGGAATTTCCCAACAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS-3UTR CAA 90 bp | GAGAACCAGCAATCTCAACTAAGCTGGACTCCAGAGATCTCAGACACTGAGCTACACCTGGTAGAGAGATaGAAACTGGTTTCTATCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ENQQSQLSWTPEISDTELHLVER*KLVSIN Trigger: ATTGATAGAAACCAGTTTCAATCTCTCTACCAGGTG...TAGCTCAGTGTCTGAGATCTCTGGAGTCCAGCTTAGTTGAGATTGCTGGTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CCA 90 bp | AATGAAGCATCAAAGAGGCAATACCAGACAATAGAGCTGTGTCTTTaGGGGCCACCTGGTAGAGAGATTGAAACTGGTTTCTATCAATCT | + |
|
Preference number: 5 (lower is better) Translates to: NEASKRQYQTIELCL*GPPGREIETGFYQS Trigger: AGATTGATAGAAACCAGTTTCAATCTCTCTACCAGGTGGCCCCCAAAGACACAGCTCTATTGTCTGGTATTGCCTCTTTGATGCTTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS-3UTR CAA 90 bp | GAGATCTCAGACACTGAGCTACAAACCAGGCAGCATACACTAGCTAATATGAGAGTCCAAGAGAGGTGTTaGGTAAAATATGGGAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: EISDTELQTRQHTLANMRVQERC*VKYGSS Trigger: TGAACTCCCATATTTTACCAAACACCTCTCTTGGAC...TCTCATATTAGCTAGTGTATGCTGCCTGGTTTGTAGCTCAGTGTCTGAGATCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS-3UTR CAA 90 bp | GAGAACCAGCAATCTCAACTAAGCTGGACTCCAGAGATCTCAGACACTGAGCTAAGTGTAGCAGCTGAATaGCTTTCTTTTCTACATGTA | + |
|
Preference number: 5 (lower is better) Translates to: ENQQSQLSWTPEISDTELSVAAE*LSFLHV Trigger: TACATGTAGAAAAGAAAGCAATTCAGCTGCTACACT...TAGCTCAGTGTCTGAGATCTCTGGAGTCCAGCTTAGTTGAGATTGCTGGTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS-3UTR CAA 90 bp | GAGAACCAGCAATCTCAACTAAGCTGGACTCCAGAGATCTCAGACACTGAGCTAGAGTCCTATCAATATTaGCCTGTGGTTGAAATTGTA | + |
|
Preference number: 5 (lower is better) Translates to: ENQQSQLSWTPEISDTELESYQY*PVVEIV Trigger: TACAATTTCAACCACAGGCAAATATTGATAGGACTC...TAGCTCAGTGTCTGAGATCTCTGGAGTCCAGCTTAGTTGAGATTGCTGGTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS-3UTR CAA 90 bp | GGAGGTGTGGAATGTGGAACTGACAGAGAATGGACTATGAGGGGGATAAAATCTATAGTGAAAGACCTGTaGGGAAATTCCAAATGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GGVECGTDREWTMRGIKSIVKDL*GNSKCW Trigger: CCAACATTTGGAATTTCCCAACAGGTCTTTCACTAT...AGATTTTATCCCCCTCATAGTCCATTCTCTGTCAGTTCCACATTCCACACCTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS-3UTR CAA 90 bp | ATGGACTCTGAAGATACACCTAATCCTCAAAGAACAGGAGGATCCAGGGAGTGTCTGAGAGATCTATTATaGGCCTTTATGATTGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: MDSEDTPNPQRTGGSRECLRDLL*AFMIGV Trigger: CACTCCAATCATAAAGGCCAATAATAGATCTCTCAG...ACACTCCCTGGATCCTCCTGTTCTTTGAGGATTAGGTGTATCTTCAGAGTCCAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS-3UTR CAA 90 bp | ACATATGCAGCAGAAGACTGTTGGGGATGGACTCTGAAGATACACCTAATCCTCTCCAAACATGTACTGTaGCATTATACACGTTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TYAAEDCWGWTLKIHLILSKHVL*HYTRCC Trigger: ACAGCAACGTGTATAATGCAACAGTACATGTTTGGA...GAGGATTAGGTGTATCTTCAGAGTCCATCCCCAACAGTCTTCTGCTGCATATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS GCA 90 bp | AAATTGTATTTGACTGAGTGTCTCCTCATGCAGACTGTGGGCCACTaGATACACAGCATTATACACATTGTAACTCTCTTCAGTCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: KLYLTECLLMQTVGH*IHSIIHIVTLFSHG Trigger: ACCATGACTGAAGAGAGTTACAATGTGTATAATGCTGTGTATGCAGTGGCCCACAGTCTGCATGAGGAGACACTCAGTCAAATACAATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CCA 90 bp | AATGAGTTTCTGGACAGTGCACACAATGATCCAAACCTGTTTCATTaGAAATCTCATTATCTGGGCAAGGAGTGCAATCAAAGCAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: NEFLDSAHNDPNLFH*KSHYLGKECNQSNR Trigger: CCTGTTGCTTTGATTGCACTCCTTGCCCAGATAATGAGATTTCCAATGAAACAGGTTTGGATCATTGTGTGCACTGTCCAGAAACTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CCA 90 bp | TTTCTTCAGGCAGTGTCTCTTCTCTGCATTCGCATAATGAGTTTCTaGACAGTGCACACAATGATCCAAACCTGTTTCATTGGAAATCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLQAVSLLCIRIMSF*TVHTMIQTCFIGNL Trigger: GAGATTTCCAATGAAACAGGTTTGGATCATTGTGTGCACTGTCCAGAAACTCATTATGCGAATGCAGAGAAGAGACACTGCCTGAAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS-3UTR CAA 90 bp | GAAGACTGTTGGGGATGGACTCTGAAGATACACCTAATCCTCAAAGAACAGGAGATATGGGAGTTCAAGTaGATCTCATTGATGGCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: EDCWGWTLKIHLILKEQEIWEFK*ISLMAN Trigger: ATTTGCCATCAATGAGATCAACTTGAACTCCCATAT...CTCCTGTTCTTTGAGGATTAGGTGTATCTTCAGAGTCCATCCCCAACAGTCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS-3UTR CAA 90 bp | ATGGACTCTGAAGATACACCTAATCCTCAAAGAACAGGAGGATCCAGGGAGTGTTCATATATTCAGACATaGACAATTGTTCCCCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: MDSEDTPNPQRTGGSRECSYIQT*TIVPLW Trigger: CCAAAGGGGAACAATTGTCAATGTCTGAATATATGA...ACACTCCCTGGATCCTCCTGTTCTTTGAGGATTAGGTGTATCTTCAGAGTCCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS-3UTR CAA 90 bp | GTGGAATGTGGAACTGACAGAGAATGGACTATGAGGGGGATAAAATCTGTACTGCCAATATGGTCCAAATaGTTTCAGATGTTTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: VECGTDREWTMRGIKSVLPIWSK*FQMFSM Trigger: CATGGAAAACATCTGAAACAATTTGGACCATATTGG...CAGTACAGATTTTATCCCCCTCATAGTCCATTCTCTGTCAGTTCCACATTCCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS TCA 90 bp | AATCTCTGTAAATCCTATAGGCCAACTAATCATATATTCAGACATTaGCAATTGTTCCCCTTTGGGAGCACTGGGAACAAATGTACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: NLCKSYRPTNHIFRH*QLFPFGSTGNKCTH Trigger: GTGGGTACATTTGTTCCCAGTGCTCCCAAAGGGGAACAATTGTCAATGTCTGAATATATGATTAGTTGGCCTATAGGATTTACAGAGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS GCA 90 bp | ATAGTACAGAAAAGTTACTGTTTTCTTCAGGCAGTGTCTCTTCTCTaGATTCGCATAATGAGTTTCTGGACAGTGCACACAATGATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: IVQKSYCFLQAVSLL*IRIMSFWTVHTMIQ Trigger: TTGGATCATTGTGTGCACTGTCCAGAAACTCATTATGCGAATGCAGAGAAGAGACACTGCCTGAAGAAAACAGTAACTTTTCTGTACTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CCA 90 bp | CCTGTGGTGTCTTTTATCCCTGTTGTGAGTAAGTATGTTCAACTCTaGCCTAAACAAAACAATGTAGCACTTAGGAGCAAAGACTATGAT | + |
|
Preference number: 5 (lower is better) Translates to: PVVSFIPVVSKYVQL*PKQNNVALRSKDYD Trigger: ATCATAGTCTTTGCTCCTAAGTGCTACATTGTTTTGTTTAGGCCAGAGTTGAACATACTTACTCACAACAGGGATAAAAGACACCACAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CCA 90 bp | GATGAGCAGTATGTAACTGAGAGATCTATTATTGGCCTTTATGATTaGAGTGCCTCTGTGGTCTACAAATACCCAAATAAAAAGAGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: DEQYVTERSIIGLYD*SASVVYKYPNKKSC Trigger: ACAGCTCTTTTTATTTGGGTATTTGTAGACCACAGAGGCACTCCAATCATAAAGGCCAATAATAGATCTCTCAGTTACATACTGCTCATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS-3UTR CAA 90 bp | ATAGTGTGTGAAATTTGTTACTTATTTCAGCATGGCATTCTAGGGAATCAAGCTATATATGAGCCCTTGTaGCAAAGAATGATGATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: IVCEICYLFQHGILGNQAIYEPL*QRMMMC Trigger: ACACATCATCATTCTTTGCAACAAGGGCTCATATAT...AGCTTGATTCCCTAGAATGCCATGCTGAAATAAGTAACAAATTTCACACACTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CAA 72 bp | TCTGGGCAAGGAGTGCAATCAAAGCAACAGGTAGGCTaGCTCTCCAGGACAACTTTCCTGAATCCAGGATTG | + |
|
Preference number: 6 (lower is better) Translates to: SGQGVQSKQQVG*LSRTTFLNPGL Trigger: CAATCCTGGATTCAGGAAAGTTGTCCTGGAGAGCAAGCCTACCTGTTGCTTTGATTGCACTCCTTGCCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS TCA 72 bp | TGGATAAGAAAGCCAAGAGGTAACTCCCAAAGGCCATaGCTCCCAGGTAAGCCAGAGTGCAGTAGAAGTAAA | + |
|
Preference number: 6 (lower is better) Translates to: WIRKPRGNSQRP*LPGKPECSRSK Trigger: TTTACTTCTACTGCACTCTGGCTTACCTGGGAGTCATGGCCTTTGGGAGTTACCTCTTGGCTTTCTTATCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CCA 72 bp | TCAAAGAGGCAATACCAGACAATAGAGCTGTGTCTTTaGGGGCCACCTGGTAGAGAGATTGAAACTGGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: SKRQYQTIELCL*GPPGREIETGF Trigger: GAAACCAGTTTCAATCTCTCTACCAGGTGGCCCCCAAAGACACAGCTCTATTGTCTGGTATTGCCTCTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS GCA 72 bp | TTGACTGAGTGTCTCCTCATGCAGACTGTGGGCCACTaGATACACAGCATTATACACATTGTAACTCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LTECLLMQTVGH*IHSIIHIVTLF Trigger: GAAGAGAGTTACAATGTGTATAATGCTGTGTATGCAGTGGCCCACAGTCTGCATGAGGAGACACTCAGTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS GCA 72 bp | GAAATTCCAAATGTTGGTAATATCATACTCTGGATCTaGCTTCCTTTTCCAGTCCAGAACCACGTGGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: EIPNVGNIILWI*LPFPVQNHVVP Trigger: GGGGACCACGTGGTTCTGGACTGGAAAAGGAAGGCAGATCCAGAGTATGATATTACCAACATTTGGAATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CAA 72 bp | AGTCCTATCAATATTTGCCTGTGGTTGAAATTGTATTaGACTGAGTGTCTCCTCATGCAGACTGTGGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SPINICLWLKLY*TECLLMQTVGH Trigger: GTGGCCCACAGTCTGCATGAGGAGACACTCAGTCAAATACAATTTCAACCACAGGCAAATATTGATAGGACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS TCA 72 bp | TCCCAGGTAAGCCAGAGTGCAGTAGAAGTAAATATATaGGCCCTTGTTGCAAAGAATGATGATGTGTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SQVSQSAVEVNI*ALVAKNDDVSM Trigger: CATGGACACATCATCATTCTTTGCAACAAGGGCTCATATATTTACTTCTACTGCACTCTGGCTTACCTGGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CCA 72 bp | TGTTGGGAAATTCCAAATGTTGGTAATATCATACTCTaGATCTGCCTTCCTTTTCCAGTCCAGAACCACGTG | + |
|
Preference number: 6 (lower is better) Translates to: CWEIPNVGNIIL*ICLPFPVQNHV Trigger: CACGTGGTTCTGGACTGGAAAAGGAAGGCAGATCCAGAGTATGATATTACCAACATTTGGAATTTCCCAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CCA 72 bp | CTGGACAGTGCACACAATGATCCAAACCTGTTTCATTaGAAATCTCATTATCTGGGCAAGGAGTGCAATCAA | + |
|
Preference number: 6 (lower is better) Translates to: LDSAHNDPNLFH*KSHYLGKECNQ Trigger: TTGATTGCACTCCTTGCCCAGATAATGAGATTTCCAATGAAACAGGTTTGGATCATTGTGTGCACTGTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CCA 72 bp | GCAGTGTCTCTTCTCTGCATTCGCATAATGAGTTTCTaGACAGTGCACACAATGATCCAAACCTGTTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: AVSLLCIRIMSF*TVHTMIQTCFI Trigger: AATGAAACAGGTTTGGATCATTGTGTGCACTGTCCAGAAACTCATTATGCGAATGCAGAGAAGAGACACTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CAA 72 bp | AGGAGATGTTCCCAGCCATATACCAGACAGAAGTACTaGTATCAGTGTGCAGATTGGAATGGCAAATTTAGG | + |
|
Preference number: 6 (lower is better) Translates to: RRCSQPYTRQKY*YQCADWNGKFR Trigger: CCTAAATTTGCCATTCCAATCTGCACACTGATACAAGTACTTCTGTCTGGTATATGGCTGGGAACATCTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS GCA 72 bp | AAAAGTTACTGTTTTCTTCAGGCAGTGTCTCTTCTCTaGATTCGCATAATGAGTTTCTGGACAGTGCACACA | + |
|
Preference number: 6 (lower is better) Translates to: KSYCFLQAVSLL*IRIMSFWTVHT Trigger: TGTGTGCACTGTCCAGAAACTCATTATGCGAATGCAGAGAAGAGACACTGCCTGAAGAAAACAGTAACTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CCA 72 bp | ATGATCCAAACCTGTTTCATTGGAAATCTCATTATCTaGGCAAGGAGTGCAATCAAAGCAACAGGTAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: MIQTCFIGNLII*ARSAIKATGRL Trigger: AAGCCTACCTGTTGCTTTGATTGCACTCCTTGCCCAGATAATGAGATTTCCAATGAAACAGGTTTGGATCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CCA 72 bp | GTGTCCATGTTCAGAGTGATAATCTTTGTCAATAAATaGAGGAGATGTTCCCAGCCATATACCAGACAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VSMFRVIIFVNK*RRCSQPYTRQK Trigger: CTTCTGTCTGGTATATGGCTGGGAACATCTCCTCCATTTATTGACAAAGATTATCACTCTGAACATGGACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CAA 90 bp | CCCACTTTCACTAATAGTGAAAGACCTGTTGGGAAATTCCAAATGTaGGTAATATCATACTCTGGATCTGCCTTCCTTTTCCAGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: PTFTNSERPVGKFQM*VISYSGSAFLFQSR Trigger: TCTGGACTGGAAAAGGAAGGCAGATCCAGAGTATGATATTACCAACATTTGGAATTTCCCAACAGGTCTTTCACTATTAGTGAAAGTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS TCA 72 bp | GAGTATATTAGGTATTTTGTGTCAGTTGGGCAGATATaGGTTGCAATGATCCAGGTGAAAGTTGGCATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: EYIRYFVSVGQI*VAMIQVKVGIC Trigger: ACAGATGCCAACTTTCACCTGGATCATTGCAACTCATATCTGCCCAACTGACACAAAATACCTAATATACTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS TCA 72 bp | GTCTACAAATACCCAAATAAAAAGAGCTGTGAGTGTTaGGAATCCAATGGAAAGAAGTGTGATTCCCTTCCC | + |
|
Preference number: 6 (lower is better) Translates to: VYKYPNKKSCEC*ESNGKKCDSLP Trigger: GGGAAGGGAATCACACTTCTTTCCATTGGATTCTCAACACTCACAGCTCTTTTTATTTGGGTATTTGTAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CAA 72 bp | CTAATCATATATTCAGACATTGACAATTGTTCCCCTTaGGGAGCACTGGGAACAAATGTACCCACTTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: LIIYSDIDNCSP*GALGTNVPTFT Trigger: AGTGAAAGTGGGTACATTTGTTCCCAGTGCTCCCAAAGGGGAACAATTGTCAATGTCTGAATATATGATTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS TCA 72 bp | AAATCCTATAGGCCAACTAATCATATATTCAGACATTaGCAATTGTTCCCCTTTGGGAGCACTGGGAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: KSYRPTNHIFRH*QLFPFGSTGNK Trigger: TTTGTTCCCAGTGCTCCCAAAGGGGAACAATTGTCAATGTCTGAATATATGATTAGTTGGCCTATAGGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CCA 72 bp | GATCTATTATTGGCCTTTATGATTGGAGTGCCTCTGTaGTCTACAAATACCCAAATAAAAAGAGCTGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: DLLLAFMIGVPL*STNTQIKRAVS Trigger: ACTCACAGCTCTTTTTATTTGGGTATTTGTAGACCACAGAGGCACTCCAATCATAAAGGCCAATAATAGATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CCA 72 bp | AGAGAATACAGTCCTAAAAATGTTCCTTCCAATAGCTaGCAGATTATAAATCTCAAGTCCAAGAGAGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: REYSPKNVPSNS*QIINLKSKRGV Trigger: AACACCTCTCTTGGACTTGAGATTTATAATCTGCCAGCTATTGGAAGGAACATTTTTAGGACTGTATTCTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CAA 72 bp | ACTAATAGTGAAAGACCTGTTGGGAAATTCCAAATGTaGGTAATATCATACTCTGGATCTGCCTTCCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: TNSERPVGKFQM*VISYSGSAFLF Trigger: GAAAAGGAAGGCAGATCCAGAGTATGATATTACCAACATTTGGAATTTCCCAACAGGTCTTTCACTATTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
||
| CDS CCA 72 bp | TATGTAACTGAGAGATCTATTATTGGCCTTTATGATTaGAGTGCCTCTGTGGTCTACAAATACCCAAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: YVTERSIIGLYD*SASVVYKYPNK Trigger: TTTATTTGGGTATTTGTAGACCACAGAGGCACTCCAATCATAAAGGCCAATAATAGATCTCTCAGTTACATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020547.10 |
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