Pregenerated sensors for VMN2R80 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000091888

Ensembl transcript IDs: ENSMUST00000165834.4

Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	ACCTGTTGGGAAATTCCAAATGTTGGTAATATCATACTCTGGATCTaGCTTCCTTTTCCAGTCCAGAACCACGTGGTCACCAACAGAATT	+
Preference number: 5 (lower is better) Translates to: TCWEIPNVGNIILWI*LPFPVQNHVVTNRI Trigger: AATTCTGTTGGTGACCACGTGGTTCTGGACTGGAAAAGGAAGGCAGATCCAGAGTATGATATTACCAACATTTGGAATTTCCCAACAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS GCA 90 bp	AAATTGTATTTGACTGAGTGTTTTCTCATGCAGACTGTAGGCCACTaGGAGCACAGCATTGTACACATTGTAACTCTCTTCAGTCATGGT	+
Preference number: 5 (lower is better) Translates to: KLYLTECFLMQTVGH*EHSIVHIVTLFSHG Trigger: ACCATGACTGAAGAGAGTTACAATGTGTACAATGCTGTGCTCGCAGTGGCCTACAGTCTGCATGAGAAAACACTCAGTCAAATACAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS CCA 90 bp	AATGAAGCATCAAAGAGGCAATACCAGACAATAGAGCTGTGTCTTTaGGGGCCATCTGGTAGAGAGATTGAAACTGGTTTCTATCAATCT	+
Preference number: 5 (lower is better) Translates to: NEASKRQYQTIELCL*GPSGREIETGFYQS Trigger: AGATTGATAGAAACCAGTTTCAATCTCTCTACCAGATGGCCCCCAAAGACACAGCTCTATTGTCTGGTATTGCCTCTTTGATGCTTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS GCA 90 bp	ACAGTGGATAGGGCCACAGTGAACAGAAGTCCAAATATGTACTGTTaGATTATACACATTGCTGTATTTGGAAGGCCAATGAAGAGCAAT	+
Preference number: 5 (lower is better) Translates to: TVDRATVNRSPNMYC*IIHIAVFGRPMKSN Trigger: ATTGCTCTTCATTGGCCTTCCAAATACAGCAATGTGTATAATGCAACAGTACATATTTGGACTTCTGTTCACTGTGGCCCTATCCACTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS CAA 72 bp	TCTGGGCAAGGAGTGCAGTCAAAGCAACAGGTAGGCTaGCTCTCCAGGGCAACTTTCCTGAATCCAGGACTG	+
Preference number: 6 (lower is better) Translates to: SGQGVQSKQQVG*LSRATFLNPGL Trigger: CAGTCCTGGATTCAGGAAAGTTGCCCTGGAGAGCAAGCCTACCTGTTGCTTTGACTGCACTCCTTGCCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS TCA 72 bp	TGGACAAGAAAGCCAAGAGGTAACTCCCAAAGGCCATaGCTCCCAGGTAAGCCAGAGTGCAGTAGAAGTAAA	+
Preference number: 6 (lower is better) Translates to: WTRKPRGNSQRP*LPGKPECSRSK Trigger: TTTACTTCTACTGCACTCTGGCTTACCTGGGAGTCATGGCCTTTGGGAGTTACCTCTTGGCTTTCTTGTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS CAA 90 bp	CTTCCTGGAGCAGTAATCTTGAAGGCCATAACTACAGTGATGGTTTaGGCTAACACAGTGGATAGGGCCACAGTGAACAGAAGTCCAAAT	+
Preference number: 6 (lower is better) Translates to: LPGAVILKAITTVMV*ANTVDRATVNRSPN Trigger: ATTTGGACTTCTGTTCACTGTGGCCCTATCCACTGTGTTAGCCAAAACCATCACTGTAGTTATGGCCTTCAAGATTACTGCTCCAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS TCA 72 bp	CTGAATCCAGGACTGCAGCTCTCACTGCATACAGAGTaGGGAATCTCTGTAAATCCTATGGGCCAATTAATC	+
Preference number: 6 (lower is better) Translates to: LNPGLQLSLHTE*GISVNPMGQLI Trigger: GATTAATTGGCCCATAGGATTTACAGAGATTCCTCACTCTGTATGCAGTGAGAGCTGCAGTCCTGGATTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS GCA 72 bp	TTGACTGAGTGTTTTCTCATGCAGACTGTAGGCCACTaGGAGCACAGCATTGTACACATTGTAACTCTCTTC	+
Preference number: 6 (lower is better) Translates to: LTECFLMQTVGH*EHSIVHIVTLF Trigger: GAAGAGAGTTACAATGTGTACAATGCTGTGCTCGCAGTGGCCTACAGTCTGCATGAGAAAACACTCAGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS CCA 72 bp	TCAAAGAGGCAATACCAGACAATAGAGCTGTGTCTTTaGGGGCCATCTGGTAGAGAGATTGAAACTGGTTTC	+
Preference number: 6 (lower is better) Translates to: SKRQYQTIELCL*GPSGREIETGF Trigger: GAAACCAGTTTCAATCTCTCTACCAGATGGCCCCCAAAGACACAGCTCTATTGTCTGGTATTGCCTCTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS CCA 72 bp	CTGGACAGTGCACACACTGATCCAAATCTGTTTCATTaGAAATCTCATTGTCTGGGCAAGGAGTGCAGTCAA	+
Preference number: 6 (lower is better) Translates to: LDSAHTDPNLFH*KSHCLGKECSQ Trigger: TTGACTGCACTCCTTGCCCAGACAATGAGATTTCCAATGAAACAGATTTGGATCAGTGTGTGCACTGTCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS TCA 72 bp	GTTTTGTCTAGCTCCTTTCTAAAGTCTGATAGAAACTaGGCACCTCTGTGGTCATCTGTGATGATCAGTCCC	+
Preference number: 6 (lower is better) Translates to: VLSSSFLKSDRN*APLWSSVMISP Trigger: GGGACTGATCATCACAGATGACCACAGAGGTGCTCAGTTTCTATCAGACTTTAGAAAGGAGCTAGACAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS GCA 72 bp	GAAATTCCAAATGTTGGTAATATCATACTCTGGATCTaGCTTCCTTTTCCAGTCCAGAACCACGTGGTCACC	+
Preference number: 6 (lower is better) Translates to: EIPNVGNIILWI*LPFPVQNHVVT Trigger: GGTGACCACGTGGTTCTGGACTGGAAAAGGAAGGCAGATCCAGAGTATGATATTACCAACATTTGGAATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS CCA 72 bp	CTGATCCAAATCTGTTTCATTGGAAATCTCATTGTCTaGGCAAGGAGTGCAGTCAAAGCAACAGGTAGGCTT	+
Preference number: 6 (lower is better) Translates to: LIQICFIGNLIV*ARSAVKATGRL Trigger: AAGCCTACCTGTTGCTTTGACTGCACTCCTTGCCCAGACAATGAGATTTCCAATGAAACAGATTTGGATCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS CCA 72 bp	GTGTCCATGTTCAGAGTGACAATCCTTGTCAATAAATaGAGGAGATGTTCCCAGCCATATACCAGAGAGAAG	+
Preference number: 6 (lower is better) Translates to: VSMFRVTILVNK*RRCSQPYTREK Trigger: CTTCTCTCTGGTATATGGCTGGGAACATCTCCTCCATTTATTGACAAGGATTGTCACTCTGAACATGGACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS CAA 90 bp	TGTGATGTCAGCAACCATCTTATCTTTCTTCCTGGAGCAGTAATCTaGAAGGCCATAACTACAGTGATGGTTTTGGCTAACACAGTGGAT	+
Preference number: 6 (lower is better) Translates to: CDVSNHLIFLPGAVI*KAITTVMVLANTVD Trigger: ATCCACTGTGTTAGCCAAAACCATCACTGTAGTTATGGCCTTCAAGATTACTGCTCCAGGAAGAAAGATAAGATGGTTGCTGACATCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS TCA 72 bp	TTGCTGCAAAGAATGATGATGTGTCCATGTTCAGAGTaGCAATCCTTGTCAATAAATGGAGGAGATGTTCCC	+
Preference number: 6 (lower is better) Translates to: LLQRMMMCPCSE*QSLSINGGDVP Trigger: GGGAACATCTCCTCCATTTATTGACAAGGATTGTCACTCTGAACATGGACACATCATCATTCTTTGCAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS CAA 72 bp	AGCAACCATCTTATCTTTCTTCCTGGAGCAGTAATCTaGAAGGCCATAACTACAGTGATGGTTTTGGCTAAC	+
Preference number: 6 (lower is better) Translates to: SNHLIFLPGAVI*KAITTVMVLAN Trigger: GTTAGCCAAAACCATCACTGTAGTTATGGCCTTCAAGATTACTGCTCCAGGAAGAAAGATAAGATGGTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS CAA 90 bp	CCCACTTTCACTAATTGTGAAAGACCTGTTGGGAAATTCCAAATGTaGGTAATATCATACTCTGGATCTGCCTTCCTTTTCCAGTCCAGA	+
Preference number: 6 (lower is better) Translates to: PTFTNCERPVGKFQM*VISYSGSAFLFQSR Trigger: TCTGGACTGGAAAAGGAAGGCAGATCCAGAGTATGATATTACCAACATTTGGAATTTCCCAACAGGTCTTTCACAATTAGTGAAAGTGGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS CCA 72 bp	TCTTTTATCCCTGTTGTGAGTAAGTGTGTTCACCTCTaGCCTAAACAAAACAATGTAGCACTTAGGAGCAAA	+
Preference number: 6 (lower is better) Translates to: SFIPVVSKCVHL*PKQNNVALRSK Trigger: TTTGCTCCTAAGTGCTACATTGTTTTGTTTAGGCCAGAGGTGAACACACTTACTCACAACAGGGATAAAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS CAA 72 bp	AGTCCTATCAATATTTGCCTGTGGTTGAAATTGTATTaGACTGAGTGTTTTCTCATGCAGACTGTAGGCCAC	+
Preference number: 6 (lower is better) Translates to: SPINICLWLKLY*TECFLMQTVGH Trigger: GTGGCCTACAGTCTGCATGAGAAAACACTCAGTCAAATACAATTTCAACCACAGGCAAATATTGATAGGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS GCA 72 bp	CAGAAGTCCAAATATGTACTGTTGCATTATACACATTaGTGTATTTGGAAGGCCAATGAAGAGCAATGGACA	+
Preference number: 6 (lower is better) Translates to: QKSKYVLLHYTH*CIWKANEEQWT Trigger: TGTCCATTGCTCTTCATTGGCCTTCCAAATACAGCAATGTGTATAATGCAACAGTACATATTTGGACTTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS CAA 90 bp	ATGGGCCAATTAATCATATATTCAGATATTGACAATTGTTCCCCTTaGGGAGCACTGGGAACAAATGTACCCACTTTCACTAATTGTGAA	+
Preference number: 6 (lower is better) Translates to: MGQLIIYSDIDNCSP*GALGTNVPTFTNCE Trigger: TTCACAATTAGTGAAAGTGGGTACATTTGTTCCCAGTGCTCCCAAAGGGGAACAATTGTCAATATCTGAATATATGATTAATTGGCCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS TCA 72 bp	AAATCCTATGGGCCAATTAATCATATATTCAGATATTaGCAATTGTTCCCCTTTGGGAGCACTGGGAACAAA	+
Preference number: 6 (lower is better) Translates to: KSYGPINHIFRY*QLFPFGSTGNK Trigger: TTTGTTCCCAGTGCTCCCAAAGGGGAACAATTGTCAATATCTGAATATATGATTAATTGGCCCATAGGATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS CAA 72 bp	ACTAATTGTGAAAGACCTGTTGGGAAATTCCAAATGTaGGTAATATCATACTCTGGATCTGCCTTCCTTTTC	+
Preference number: 6 (lower is better) Translates to: TNCERPVGKFQM*VISYSGSAFLF Trigger: GAAAAGGAAGGCAGATCCAGAGTATGATATTACCAACATTTGGAATTTCCCAACAGGTCTTTCACAATTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS CAA 72 bp	TTAATCATATATTCAGATATTGACAATTGTTCCCCTTaGGGAGCACTGGGAACAAATGTACCCACTTTCACT	+
Preference number: 6 (lower is better) Translates to: LIIYSDIDNCSP*GALGTNVPTFT Trigger: AGTGAAAGTGGGTACATTTGTTCCCAGTGCTCCCAAAGGGGAACAATTGTCAATATCTGAATATATGATTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165834.4
CDS TCA 72 bp	GATTCTAGAAAGTGGATAAGATTTTGGGATAGCAAATaGAGTAGGGTTTCCTCCAGATATAATACTGTTTGC	+
Preference number: 6 (lower is better) Translates to: DSRKWIRFWDSK*SRVSSRYNTVC Trigger: GCAAACAGTATTATATCTGGAGGAAACCCTACTTCATTTGCTATCCCAAAATCTTATCCACTTTCTAGAATC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000165834.4