Pregenerated sensors for VMN2R78 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091962Ensembl transcript IDs: ENSMUST00000170835.4, ENSMUST00000233033.2
Found 101 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGGGATCCATCCCATATACAGCCAACAAAACAGACACTATTGCTaGTGCTGGGAAGTGCTTCCTGACAGGAGCCTGGTATGGCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: LGIHPIYSQQNRHYC*CWEVLPDRSLVWLS Trigger: AGAGAGCCATACCAGGCTCCTGTCAGGAAGCACTTCCCAGCATCAGCAATAGTGTCTGTTTTGTTGGCTGTATATGGGATGGATCCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR CCA 90 bp | TGTGGAGCAGAGACTGAAGGAAGGCCATTCAGAGACAGGCCCACCTaGGGATCCATCCCATATACAGCCAACAAAACAGACACTATTGCT | + |
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Preference number: 1 (lower is better) Translates to: CGAETEGRPFRDRPT*GSIPYTANKTDTIA Trigger: AGCAATAGTGTCTGTTTTGTTGGCTGTATATGGGATGGATCCCCAGGTGGGCCTGTCTCTGAATGGCCTTCCTTCAGTCTCTGCTCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR GCA 90 bp | CCTTATGGAGGACTTCGAGAAGAGACTGAAGAAGCTGAGGGAGTTTaGAGCCCCATGGAGGGAGCAACAATGTTAACATGCCAGAACCTT | + |
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Preference number: 1 (lower is better) Translates to: PYGGLREETEEAEGV*SPMEGATMLTCQNL Trigger: AAGGTTCTGGCATGTTAACATTGTTGCTCCCTCCATGGGGCTGCAAACTCCCTCAGCTTCTTCAGTCTCTTCTCGAAGTCCTCCATAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR GCA 90 bp | CCATATACAGCCAACAAAACAGACACTATTGCTGATGCTGGGAAGTaGTTCCTGACAGGAGCCTGGTATGGCTCTCTCCTGAGAAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: PYTANKTDTIADAGK*FLTGAWYGSLLRSS Trigger: AGAGCTTCTCAGGAGAGAGCCATACCAGGCTCCTGTCAGGAAGCACTTCCCAGCATCAGCAATAGTGTCTGTTTTGTTGGCTGTATATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR TCA 90 bp | AGCCTGACAAATACAGAAATAGATGTTCACAACCCACCATTAGACTaGTCACGGGGGTCCCTTATGGAGGACTTCGAGAAGAGACTGAAG | + |
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Preference number: 1 (lower is better) Translates to: SLTNTEIDVHNPPLD*SRGSLMEDFEKRLK Trigger: CTTCAGTCTCTTCTCGAAGTCCTCCATAAGGGACCCCCGTGATCAGTCTAATGGTGGGTTGTGAACATCTATTTCTGTATTTGTCAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR CCA 90 bp | CTTTTGTTGTTGAGAGAAGAAAACAGGAGGGCAAGTGGTCTCTTGTaGGTTACAGTAGGAGAGTGGAGAATGAACAGCTGGAATTTGAAG | + |
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Preference number: 1 (lower is better) Translates to: LLLLREENRRASGLL*VTVGEWRMNSWNLK Trigger: CTTCAAATTCCAGCTGTTCATTCTCCACTCTCCTACTGTAACCCACAAGAGACCACTTGCCCTCCTGTTTTCTTCTCTCAACAACAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR CCA 90 bp | TGCTCCACTATGTTCATAGCAGCCATATTTACAATAGCCAGAAGCTaGAAAAACCCAGATATCCCTCAACAGAGGATTGGATACAGAAAA | + |
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Preference number: 1 (lower is better) Translates to: CSTMFIAAIFTIARS*KNPDIPQQRIGYRK Trigger: TTTTCTGTATCCAATCCTCTGTTGAGGGATATCTGGGTTTTTCCAGCTTCTGGCTATTGTAAATATGGCTGCTATGAACATAGTGGAGCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR GCA 90 bp | TTGGATCAAAGACCTCACCACAAAATTAGATTCATTGTACCTGAGTaGACGAGAATGGTCAGGGAATACATTGACACAAGACAATGTTCT | + |
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Preference number: 1 (lower is better) Translates to: LDQRPHHKIRFIVPE*TRMVREYIDTRQCS Trigger: AGAACATTGTCTTGTGTCAATGTATTCCCTGACCATTCTCGTGCACTCAGGTACAATGAATCTAATTTTGTGGTGAGGTCTTTGATCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR GCA 90 bp | AGAGTTACAAAAACAAAAGCATCTAGAAAGAAGCATGAGTTGGTCTaGACCAGGTCCTCTGAATATATGGTTAGCTTGAATTTCTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: RVTKTKASRKKHELV*TRSSEYMVSLNFCG Trigger: TCCACAGAAATTCAAGCTAACCATATATTCAGAGGACCTGGTGCAGACCAACTCATGCTTCTTTCTAGATGCTTTTGTTTTTGTAACTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR GCA 90 bp | GAATGGTATAGTTGGTATAGGCTAGAAATCTTATTCTACAGGCTATaGAAAGATAACATAGATGTTACAAATTCCACTAAACCATCCCCC | + |
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Preference number: 1 (lower is better) Translates to: EWYSWYRLEILFYRL*KDNIDVTNSTKPSP Trigger: GGGGGATGGTTTAGTGGAATTTGTAACATCTATGTTATCTTTGCATAGCCTGTAGAATAAGATTTCTAGCCTATACCAACTATACCATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR CCA 90 bp | AAGGAGTTATGCCCAACCTTACTAGTATGGTTATACCCTGGAAAATaGATATTCCAGAAAATTAGCAAATTCCAAATAGTACAGTACTAC | + |
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Preference number: 1 (lower is better) Translates to: KELCPTLLVWLYPGK*IFQKISKFQIVQYY Trigger: GTAGTACTGTACTATTTGGAATTTGCTAATTTTCTGGAATATCCATTTTCCAGGGTATAACCATACTAGTAAGGTTGGGCATAACTCCTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAGGCCATTCAGAGACAGGCCCACCTGGGGATCCATCCCATATACAGCCATTCCTGACAGGAGCCTaGTATGGCTCTCTCCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: KEGHSETGPPGDPSHIQPFLTGA*YGSLLR Trigger: TCTCAGGAGAGAGCCATACCAGGCTCCTGTCAGGAA...TGGCTGTATATGGGATGGATCCCCAGGTGGGCCTGTCTCTGAATGGCCTTCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGAAGGCCATTCAGAGACAGGCCCACCTGGGGATCCATCCCATATACAGCCAAACAGACACTATTGCTaGTGCTGGGAAGTGCTTCCT | + |
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Preference number: 2 (lower is better) Translates to: KEGHSETGPPGDPSHIQPNRHYC*CWEVLP Trigger: AGGAAGCACTTCCCAGCATCAGCAATAGTGTCTGTT...TGGCTGTATATGGGATGGATCCCCAGGTGGGCCTGTCTCTGAATGGCCTTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGAAGGCCATTCAGAGACAGGCCCACCTGGGGATCCATCCCATATACAGCCATCTCCTGAGAAGCTCTaGCAGAGCCTGACAAATACA | + |
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Preference number: 2 (lower is better) Translates to: KEGHSETGPPGDPSHIQPSPEKL*QSLTNT Trigger: TGTATTTGTCAGGCTCTGGCAGAGCTTCTCAGGAGA...TGGCTGTATATGGGATGGATCCCCAGGTGGGCCTGTCTCTGAATGGCCTTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR CCA 90 bp | CCATATACAGCCAACAAAACAGACACTATTGCTGATGCTGGGAAGTGCTTCCTGCAAATGGGTGATAGGTaGGTGGGTAGGGGAGCACCC | + |
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Preference number: 2 (lower is better) Translates to: PYTANKTDTIADAGKCFLQMGDR*VGRGAP Trigger: GGGTGCTCCCCTACCCACCCACCTATCACCCATTTG...CAGGAAGCACTTCCCAGCATCAGCAATAGTGTCTGTTTTGTTGGCTGTATATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGACAAATACAGAAATAGATGTTCACAACCCACCATTAGACTGATCACGGGGACATGCCAGAACCTTTaGAACTCCCTGGGGCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: PDKYRNRCSQPTIRLITGTCQNL*NSLGLD Trigger: GTCCAGCCCCAGGGAGTTCCAAAGGTTCTGGCATGT...CCCCGTGATCAGTCTAATGGTGGGTTGTGAACATCTATTTCTGTATTTGTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGAAGGCCATTCAGAGACAGGCCCACCTGGGGATCCATCCCATATACAGCCACTTTTTGAACATCATTaGGAGGAGAAGCTCTTTTAC | + |
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Preference number: 2 (lower is better) Translates to: KEGHSETGPPGDPSHIQPLFEHH*EEKLFY Trigger: GTAAAAGAGCTTCTCCTCCCAATGATGTTCAAAAAG...TGGCTGTATATGGGATGGATCCCCAGGTGGGCCTGTCTCTGAATGGCCTTCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR TCA 90 bp | CCATATACAGCCAACAAAACAGACACTATTGCTGATGCTGGGAAGTGCTTCCTGTTACCTGATGGTGTTTaGTGCCCCAGAGTACAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PYTANKTDTIADAGKCFLLPDGV*CPRVQE Trigger: TTCCTGTACTCTGGGGCATCAAACACCATCAGGTAA...CAGGAAGCACTTCCCAGCATCAGCAATAGTGTCTGTTTTGTTGGCTGTATATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCTATACCACTCGTGGGCATATACACAGAAGATGCTCCAGCATGTAATAAGAGAAGCTCTTTTACCTaGTGGTGTTTGATGCCCCAG | + |
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Preference number: 2 (lower is better) Translates to: AAIPLVGIYTEDAPACNKRSSFT*WCLMPQ Trigger: CTGGGGCATCAAACACCATCAGGTAAAAGAGCTTCT...CTTATTACATGCTGGAGCATCTTCTGTGTATATGCCCACGAGTGGTATAGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR CAA 90 bp | TCCCTTTTGTTGTTGAGAGAAGAAAACAGGAGGGCAAGTGGTCTCTaGTGGGTTACAGTAGGAGAGTGGAGAATGAACAGCTGGAATTTG | + |
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Preference number: 2 (lower is better) Translates to: SLLLLREENRRASGL*WVTVGEWRMNSWNL Trigger: CAAATTCCAGCTGTTCATTCTCCACTCTCCTACTGTAACCCACAAGAGACCACTTGCCCTCCTGTTTTCTTCTCTCAACAACAAAAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR GCA 90 bp | GCAGCTATACCACTCGTGGGCATATACACAGAAGATGCTCCAGCATGTAATAAGAAGCATGAGTTGGTCTaGACCAGGTCCTCTGAATAT | + |
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Preference number: 2 (lower is better) Translates to: AAIPLVGIYTEDAPACNKKHELV*TRSSEY Trigger: ATATTCAGAGGACCTGGTGCAGACCAACTCATGCTT...CTTATTACATGCTGGAGCATCTTCTGTGTATATGCCCACGAGTGGTATAGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGACAAATACAGAAATAGATGTTCACAACCCACCATTAGACTGATCACGGGGCTCATTTCCTCCTATTaGGCTGCCTTGTCCATCCTT | + |
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Preference number: 2 (lower is better) Translates to: PDKYRNRCSQPTIRLITGLISSY*AALSIL Trigger: AAGGATGGACAAGGCAGCCCAATAGGAGGAAATGAG...CCCCGTGATCAGTCTAATGGTGGGTTGTGAACATCTATTTCTGTATTTGTCAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGACAAATACAGAAATAGATGTTCACAACCCACCATTAGACTGATCACGGGGGCTCGCTGCATGTGTTaGGAGGATGACCTTTTTGAA | + |
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Preference number: 2 (lower is better) Translates to: PDKYRNRCSQPTIRLITGARCMC*EDDLFE Trigger: TTCAAAAAGGTCATCCTCCCAACACATGCAGCGAGC...CCCCGTGATCAGTCTAATGGTGGGTTGTGAACATCTATTTCTGTATTTGTCAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCTATACCACTCGTGGGCATATACACAGAAGATGCTCCAGCATGTAATAAGCTGCTTGCTAGCCTTTaGAACTCATTTCCTCCTATT | + |
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Preference number: 2 (lower is better) Translates to: AAIPLVGIYTEDAPACNKLLASL*NSFPPI Trigger: AATAGGAGGAAATGAGTTTCAAAGGCTAGCAAGCAG...CTTATTACATGCTGGAGCATCTTCTGTGTATATGCCCACGAGTGGTATAGCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR CCA 90 bp | ATATTCCAGAAAATTAGCAAATTCCAAATAGTACAGTACTACCTGAGGATGCAGATGCCAGGGCCCAAATaGGTGATAGGTGGGTGGGTA | + |
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Preference number: 2 (lower is better) Translates to: IFQKISKFQIVQYYLRMQMPGPK*VIGGWV Trigger: TACCCACCCACCTATCACCCATTTGGGCCCTGGCAT...CTGCATCCTCAGGTAGTACTGTACTATTTGGAATTTGCTAATTTTCTGGAATAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR TCA 90 bp | ATATTCCAGAAAATTAGCAAATTCCAAATAGTACAGTACTACCTGAGGATGCAGCTGTGGAGCAGAGACTaGAGGAAGGCCATTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: IFQKISKFQIVQYYLRMQLWSRD*RKAIQR Trigger: TCTCTGAATGGCCTTCCTTCAGTCTCTGCTCCACAG...CTGCATCCTCAGGTAGTACTGTACTATTTGGAATTTGCTAATTTTCTGGAATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTAATTGGATCAAAGACCTCACCACAAAATTAGATTCATTGTACCTGAGTGAAAGAAGCATGAGTTaGTCTGCACCAGGTCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: LFNWIKDLTTKLDSLYLSERSMS*SAPGPL Trigger: CAGAGGACCTGGTGCAGACCAACTCATGCTTCTTTC...ACTCAGGTACAATGAATCTAATTTTGTGGTGAGGTCTTTGATCCAATTAAACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGACAAATACAGAAATAGATGTTCACAACCCACCATTAGACTGATCACGGGGAAAATACAGGAGGATTaGAGAACACCAGAAGAAAAA | + |
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Preference number: 2 (lower is better) Translates to: PDKYRNRCSQPTIRLITGKIQED*RTPEEK Trigger: TTTTTCTTCTGGTGTTCTGCAATCCTCCTGTATTTT...CCCCGTGATCAGTCTAATGGTGGGTTGTGAACATCTATTTCTGTATTTGTCAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR CCA 90 bp | CTGTTTAATTGGATCAAAGACCTCACCACAAAATTAGATTCATTGTACCTGAGTAGAGGTCTAGGGCCATaGAACATGAGTCTTTTTGGG | + |
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Preference number: 2 (lower is better) Translates to: LFNWIKDLTTKLDSLYLSRGLGP*NMSLFG Trigger: CCCAAAAAGACTCATGTTCCATGGCCCTAGACCTCT...ACTCAGGTACAATGAATCTAATTTTGTGGTGAGGTCTTTGATCCAATTAAACAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR CAA 90 bp | CTTCTGTTTAATTGGATCAAAGACCTCACCACAAAATTAGATTCATaGTACCTGAGTGCACGAGAATGGTCAGGGAATACATTGACACAA | + |
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Preference number: 2 (lower is better) Translates to: LLFNWIKDLTTKLDS*YLSAREWSGNTLTQ Trigger: TTGTGTCAATGTATTCCCTGACCATTCTCGTGCACTCAGGTACAATGAATCTAATTTTGTGGTGAGGTCTTTGATCCAATTAAACAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGTTTAATTGGATCAAAGACCTCACCACAAAATTAGATTCATTGTACCTGCAGCTATACCACTCGTaGGCATATACACAGAAGATG | + |
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Preference number: 2 (lower is better) Translates to: LLFNWIKDLTTKLDSLYLQLYHS*AYTQKM Trigger: CATCTTCTGTGTATATGCCCACGAGTGGTATAGCTG...CAGGTACAATGAATCTAATTTTGTGGTGAGGTCTTTGATCCAATTAAACAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR CAA 90 bp | CACATTAGAGTTACAAAAACAAAAGCATCTAGAAAGAAGCATGAGTaGGTCTGCACCAGGTCCTCTGAATATATGGTTAGCTTGAATTTC | + |
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Preference number: 2 (lower is better) Translates to: HIRVTKTKASRKKHE*VCTRSSEYMVSLNF Trigger: GAAATTCAAGCTAACCATATATTCAGAGGACCTGGTGCAGACCAACTCATGCTTCTTTCTAGATGCTTTTGTTTTTGTAACTCTAATGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTTTAATTGGATCAAAGACCTCACCACAAAATTAGATTCATTGTACCTGAGTCTCGAAAAGGAGTTATaGCCAACCTTACTAGTATGG | + |
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Preference number: 2 (lower is better) Translates to: LFNWIKDLTTKLDSLYLSLEKEL*PTLLVW Trigger: CCATACTAGTAAGGTTGGGCATAACTCCTTTTCGAG...ACTCAGGTACAATGAATCTAATTTTGTGGTGAGGTCTTTGATCCAATTAAACAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR CCA 90 bp | ATATTCCAGAAAATTAGCAAATTCCAAATAGTACAGTACTACCTGAGGATGCAGACAATAGCCAGAAGCTaGAAAAACCCAGATATCCCT | + |
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Preference number: 2 (lower is better) Translates to: IFQKISKFQIVQYYLRMQTIARS*KNPDIP Trigger: AGGGATATCTGGGTTTTTCCAGCTTCTGGCTATTGT...CTGCATCCTCAGGTAGTACTGTACTATTTGGAATTTGCTAATTTTCTGGAATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR CCA 90 bp | CTTCTGTTTAATTGGATCAAAGACCTCACCACAAAATTAGATTCATTGTACCTGAATTCACAGACCATATaGAGCATAAGAAGAAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: LLFNWIKDLTTKLDSLYLNSQTI*SIRRRK Trigger: CTTCCTTCTTCTTATGCTCCATATGGTCTGTGAATT...CAGGTACAATGAATCTAATTTTGTGGTGAGGTCTTTGATCCAATTAAACAGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR CCA 90 bp | GAACAAAAGACATGTAGACCAGGCACTAACACCAACAACTTATCATTGTATAACAGTATGGTTATACCCTaGAAAATGGATATTCCAGAA | + |
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Preference number: 2 (lower is better) Translates to: EQKTCRPGTNTNNLSLYNSMVIP*KMDIPE Trigger: TTCTGGAATATCCATTTTCCAGGGTATAACCATACT...GTTATACAATGATAAGTTGTTGGTGTTAGTGCCTGGTCTACATGTCTTTTGTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR CCA 72 bp | GAGTACAGGAATGCCAGGGCCCAAATGGGTGATAGGTaGGTGGGTAGGGGAGCACCCTCACAGATAAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: EYRNARAQMGDR*VGRGAPSQIRG Trigger: TCCCCTTATCTGTGAGGGTGCTCCCCTACCCACCCACCTATCACCCATTTGGGCCCTGGCATTCCTGTACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR CCA 72 bp | ATTGCTGATGCTGGGAAGTGCTTCCTGACAGGAGCCTaGTATGGCTCTCTCCTGAGAAGCTCTGCCAGAGCC | + |
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Preference number: 3 (lower is better) Translates to: IADAGKCFLTGA*YGSLLRSSARA Trigger: GGCTCTGGCAGAGCTTCTCAGGAGAGAGCCATACCAGGCTCCTGTCAGGAAGCACTTCCCAGCATCAGCAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR GCA 72 bp | GTTTGCAGCCCCATGGAGGGAGCAACAATGTTAACATaGCAGAACCTTTGGAACTCCCTGGGGCTGGACCAC | + |
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Preference number: 3 (lower is better) Translates to: VCSPMEGATMLT*QNLWNSLGLDH Trigger: GTGGTCCAGCCCCAGGGAGTTCCAAAGGTTCTGGCATGTTAACATTGTTGCTCCCTCCATGGGGCTGCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR TCA 72 bp | ACAGTAGGAAATATGGAGACACTGTGGAGCAGAGACTaGAGGAAGGCCATTCAGAGACAGGCCCACCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: TVGNMETLWSRD*RKAIQRQAHLG Trigger: CCCCAGGTGGGCCTGTCTCTGAATGGCCTTCCTTCAGTCTCTGCTCCACAGTGTCTCCATATTTCCTACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR GCA 72 bp | GCCAACAAAACAGACACTATTGCTGATGCTGGGAAGTaGTTCCTGACAGGAGCCTGGTATGGCTCTCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: ANKTDTIADAGK*FLTGAWYGSLL Trigger: CAGGAGAGAGCCATACCAGGCTCCTGTCAGGAAGCACTTCCCAGCATCAGCAATAGTGTCTGTTTTGTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR GCA 72 bp | GGACTTCGAGAAGAGACTGAAGAAGCTGAGGGAGTTTaGAGCCCCATGGAGGGAGCAACAATGTTAACATGC | + |
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Preference number: 3 (lower is better) Translates to: GLREETEEAEGV*SPMEGATMLTC Trigger: GCATGTTAACATTGTTGCTCCCTCCATGGGGCTGCAAACTCCCTCAGCTTCTTCAGTCTCTTCTCGAAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR CCA 72 bp | ACAGATGGAGGGACCCATAGTGCTCGCTGCATGTGTTaGGAGGATGACCTTTTTGAACATCATTGGGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: TDGGTHSARCMC*EDDLFEHHWEE Trigger: CTCCTCCCAATGATGTTCAAAAAGGTCATCCTCCCAACACATGCAGCGAGCACTATGGGTCCCTCCATCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR CCA 72 bp | ATGGAGGGAGCAACAATGTTAACATGCCAGAACCTTTaGAACTCCCTGGGGCTGGACCACCAACAAAAGGAC | + |
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Preference number: 3 (lower is better) Translates to: MEGATMLTCQNL*NSLGLDHQQKD Trigger: GTCCTTTTGTTGGTGGTCCAGCCCCAGGGAGTTCCAAAGGTTCTGGCATGTTAACATTGTTGCTCCCTCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR GCA 72 bp | GACAGGAGCCTGGTATGGCTCTCTCCTGAGAAGCTCTaGCAGAGCCTGACAAATACAGAAATAGATGTTCAC | + |
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Preference number: 3 (lower is better) Translates to: DRSLVWLSPEKL*QSLTNTEIDVH Trigger: GTGAACATCTATTTCTGTATTTGTCAGGCTCTGGCAGAGCTTCTCAGGAGAGAGCCATACCAGGCTCCTGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR-3UTR CAA 90 bp | CTAAACCATCCCCCTACAATATGTCCAGCAAGATGTGCTGAGGAAATGGTAGCAAGAAAGAAGCATGAGTaGGTCTGCACCAGGTCCTCT | + |
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Preference number: 3 (lower is better) Translates to: LNHPPTICPARCAEEMVARKKHE*VCTRSS Trigger: AGAGGACCTGGTGCAGACCAACTCATGCTTCTTTCT...TGCTACCATTTCCTCAGCACATCTTGCTGGACATATTGTAGGGGGATGGTTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR TCA 72 bp | AATACAGAAATAGATGTTCACAACCCACCATTAGACTaGTCACGGGGGTCCCTTATGGAGGACTTCGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: NTEIDVHNPPLD*SRGSLMEDFEK Trigger: CTTCTCGAAGTCCTCCATAAGGGACCCCCGTGATCAGTCTAATGGTGGGTTGTGAACATCTATTTCTGTATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
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| 3UTR CCA 72 bp | GTACAGTACTACCTGAGGATGCAGCTATACCACTCGTaGGCATATACACAGAAGATGCTCCAGCATGTAATA | + |
|
Preference number: 3 (lower is better) Translates to: VQYYLRMQLYHS*AYTQKMLQHVI Trigger: TATTACATGCTGGAGCATCTTCTGTGTATATGCCCACGAGTGGTATAGCTGCATCCTCAGGTAGTACTGTAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| 3UTR CCA 72 bp | AGGGCAAGTGGTCTCTTGTGGGTTACAGTAGGAGAGTaGAGAATGAACAGCTGGAATTTGAAGGATTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: RASGLLWVTVGE*RMNSWNLKDFS Trigger: ACTGAAATCCTTCAAATTCCAGCTGTTCATTCTCCACTCTCCTACTGTAACCCACAAGAGACCACTTGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| 3UTR CCA 72 bp | CCTTTTGTTGTTGAGAGAAGAAAACAGGAGGGCAAGTaGTCTCTTGTGGGTTACAGTAGGAGAGTGGAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: PFVVERRKQEGK*SLVGYSRRVEN Trigger: ATTCTCCACTCTCCTACTGTAACCCACAAGAGACCACTTGCCCTCCTGTTTTCTTCTCTCAACAACAAAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| 3UTR-3UTR CAA 90 bp | GAACAAAAGACATGTAGACCAGGCACTAACACCAACAACTTATCATTGTATAACAACATGCCAGAACCTTaGGAACTCCCTGGGGCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: EQKTCRPGTNTNNLSLYNNMPEP*ELPGAG Trigger: TCCAGCCCCAGGGAGTTCCAAAGGTTCTGGCATGTT...GTTATACAATGATAAGTTGTTGGTGTTAGTGCCTGGTCTACATGTCTTTTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| 3UTR GCA 72 bp | CTATTGCCAACTCTGTCTATACCACTCTTGTATATTTaGCTAGTGCTTTCTCATACCACAAGGACAGTCGTT | + |
|
Preference number: 3 (lower is better) Translates to: LLPTLSIPLLYI*LVLSHTTRTVV Trigger: AACGACTGTCCTTGTGGTATGAGAAAGCACTAGGCAAATATACAAGAGTGGTATAGACAGAGTTGGCAATAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| 3UTR GCA 72 bp | AGACCTCACCACAAAATTAGATTCATTGTACCTGAGTaGACGAGAATGGTCAGGGAATACATTGACACAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RPHHKIRFIVPE*TRMVREYIDTR Trigger: TCTTGTGTCAATGTATTCCCTGACCATTCTCGTGCACTCAGGTACAATGAATCTAATTTTGTGGTGAGGTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTTTAATTGGATCAAAGACCTCACCACAAAATTAGATTCATTGTACCTGAGTGGGAGGATGACCTTTTaGAACATCATTGGGAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LFNWIKDLTTKLDSLYLSGRMTF*NIIGRR Trigger: TCTCCTCCCAATGATGTTCAAAAAGGTCATCCTCCC...ACTCAGGTACAATGAATCTAATTTTGTGGTGAGGTCTTTGATCCAATTAAACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| 3UTR TCA 72 bp | ACTCATTTCCTCCTATTGGGCTGCCTTGTCCATCCTTaGTATAATGAGTCTTGGCTTATCTTATTGTGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: THFLLLGCLVHP*YNESWLILLCL Trigger: AAGACACAATAAGATAAGCCAAGACTCATTATATCAAGGATGGACAAGGCAGCCCAATAGGAGGAAATGAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| 3UTR GCA 72 bp | AAAACAAAAGCATCTAGAAAGAAGCATGAGTTGGTCTaGACCAGGTCCTCTGAATATATGGTTAGCTTGAAT | + |
|
Preference number: 3 (lower is better) Translates to: KTKASRKKHELV*TRSSEYMVSLN Trigger: ATTCAAGCTAACCATATATTCAGAGGACCTGGTGCAGACCAACTCATGCTTCTTTCTAGATGCTTTTGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| 3UTR CCA 72 bp | ACAAAATTAGATTCATTGTACCTGAGTGCACGAGAATaGTCAGGGAATACATTGACACAAGACAATGTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: TKLDSLYLSARE*SGNTLTQDNVL Trigger: CAGAACATTGTCTTGTGTCAATGTATTCCCTGACCATTCTCGTGCACTCAGGTACAATGAATCTAATTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| 3UTR TCA 72 bp | TGGAGAATGAACAGCTGGAATTTGAAGGATTTCAGTTaGCCATGTGGAAATATAGTACAGTATAAACGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: WRMNSWNLKDFS*PCGNIVQYKRF Trigger: AAAACGTTTATACTGTACTATATTTCCACATGGTCAACTGAAATCCTTCAAATTCCAGCTGTTCATTCTCCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| 3UTR CAA 72 bp | CATGGAGGGAGCAACAATGTTAACATGCCAGAACCTTaGGAACTCCCTGGGGCTGGACCACCAACAAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HGGSNNVNMPEP*ELPGAGPPTKG Trigger: TCCTTTTGTTGGTGGTCCAGCCCCAGGGAGTTCCAAAGGTTCTGGCATGTTAACATTGTTGCTCCCTCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS-3UTR TCA 90 bp | CTAAACCATCCCCCTACAATATGTCCAGCAAGATGTGCTGAGGAAATGGTAGCACAGTTCCATCTGAAGTaGACGGCTAGGGACACCATG | + |
|
Preference number: 4 (lower is better) Translates to: LNHPPTICPARCAEEMVAQFHLK*TARDTM Trigger: CATGGTGTCCCTAGCCGTTCACTTCAGATGGAACTG...TGCTACCATTTCCTCAGCACATCTTGCTGGACATATTGTAGGGGGATGGTTTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS-3UTR GCA 90 bp | GCAGCTATACCACTCGTGGGCATATACACAGAAGATGCTCCAGCATGTAATAAGGCGGAGGCTAGAGTCTaGTTGATATCTGTAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AAIPLVGIYTEDAPACNKAEARV*LISVAH Trigger: GTGGGCTACAGATATCAAGCAGACTCTAGCCTCCGC...CTTATTACATGCTGGAGCATCTTCTGTGTATATGCCCACGAGTGGTATAGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCTATACCACTCGTGGGCATATACACAGAAGATGCTCCAGCATGTAATAAGACGGCCTTTCCCTCCTaGAAGTATTTTCTGAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AAIPLVGIYTEDAPACNKTAFPS*KYFLSP Trigger: AGGACTCAGAAAATACTTTCAGGAGGGAAAGGCCGT...CTTATTACATGCTGGAGCATCTTCTGTGTATATGCCCACGAGTGGTATAGCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS-3UTR TCA 90 bp | CTAAACCATCCCCCTACAATATGTCCAGCAAGATGTGCTGAGGAAATGGTAGCACGTTCCATCATTCTCTaGGCATGTGTCTACTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNHPPTICPARCAEEMVARSIIL*ACVYLL Trigger: CAACAAGTAGACACATGCTCAGAGAATGATGGAACG...TGCTACCATTTCCTCAGCACATCTTGCTGGACATATTGTAGGGGGATGGTTTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCTATACCACTCGTGGGCATATACACAGAAGATGCTCCAGCATGTAATAAGCAAATTGTGACACACTaGCCCAAAGTCTCTGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: AAIPLVGIYTEDAPACNKQIVTH*PKVSEC Trigger: ACATTCAGAGACTTTGGGTCAGTGTGTCACAATTTG...CTTATTACATGCTGGAGCATCTTCTGTGTATATGCCCACGAGTGGTATAGCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS-3UTR TCA 90 bp | TATTGGGCTGCCTTGTCCATCCTTGATATAATGAGTCTTGGCTTATCTTATTGTTGCAGAAGCATCTCATaGAGTGAGTGGGCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: YWAALSILDIMSLGLSYCCRSIS*SEWATA Trigger: TGCTGTGGCCCACTCACTTCATGAGATGCTTCTGCA...ACAATAAGATAAGCCAAGACTCATTATATCAAGGATGGACAAGGCAGCCCAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS-3UTR TCA 90 bp | CCTGACAAATACAGAAATAGATGTTCACAACCCACCATTAGACTGATCACGGGGCCTGAAAGTATTTTCTaGGTCCTGGTCTGCAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PDKYRNRCSQPTIRLITGPESIF*VLVCKV Trigger: TACCTTGCAGACCAGGACTCAGAAAATACTTTCAGG...CCCCGTGATCAGTCTAATGGTGGGTTGTGAACATCTATTTCTGTATTTGTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS-3UTR TCA 90 bp | CTAAACCATCCCCCTACAATATGTCCAGCAAGATGTGCTGAGGAAATGGTAGCAGATCATATCAAATTGTaGCACACTGACCCAAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNHPPTICPARCAEEMVADHIKL*HTDPKS Trigger: AGACTTTGGGTCAGTGTGTCACAATTTGATATGATC...TGCTACCATTTCCTCAGCACATCTTGCTGGACATATTGTAGGGGGATGGTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS-3UTR TCA 90 bp | GCAGCTATACCACTCGTGGGCATATACACAGAAGATGCTCCAGCATGTAATAAGCTCAGACTGCTGATGTaGAAAAATAAGAGTTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: AAIPLVGIYTEDAPACNKLRLLM*KNKSSM Trigger: CATGGAACTCTTATTTTTTCACATCAGCAGTCTGAG...CTTATTACATGCTGGAGCATCTTCTGTGTATATGCCCACGAGTGGTATAGCTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS-3UTR TCA 90 bp | CTGTTTAATTGGATCAAAGACCTCACCACAAAATTAGATTCATTGTACCTGAGTAAGCATCTCATGAAGTaGGTGGGCCACAGCATACAC | + |
|
Preference number: 4 (lower is better) Translates to: LFNWIKDLTTKLDSLYLSKHLMK*VGHSIH Trigger: GTGTATGCTGTGGCCCACTCACTTCATGAGATGCTT...ACTCAGGTACAATGAATCTAATTTTGTGGTGAGGTCTTTGATCCAATTAAACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS-3UTR GCA 90 bp | CCTGACAAATACAGAAATAGATGTTCACAACCCACCATTAGACTGATCACGGGGGATGGGTGCACTGTCTaGATAAATTGTTTAAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: PDKYRNRCSQPTIRLITGDGCTV*INCLKP Trigger: TGGTTTTAAACAATTTATGCAGACAGTGCACCCATC...CCCCGTGATCAGTCTAATGGTGGGTTGTGAACATCTATTTCTGTATTTGTCAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS-3UTR CCA 90 bp | GCAGCTATACCACTCGTGGGCATATACACAGAAGATGCTCCAGCATGTAATAAGTCCCGTTCTCTATTCTaGTTCATATTTATTAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AAIPLVGIYTEDAPACNKSRSLF*FIFIRS Trigger: AGACCTAATAAATATGAACCAGAATAGAGAACGGGA...CTTATTACATGCTGGAGCATCTTCTGTGTATATGCCCACGAGTGGTATAGCTGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| 3UTR CAA 72 bp | GTTACAAAAACAAAAGCATCTAGAAAGAAGCATGAGTaGGTCTGCACCAGGTCCTCTGAATATATGGTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTKTKASRKKHE*VCTRSSEYMVS Trigger: GCTAACCATATATTCAGAGGACCTGGTGCAGACCAACTCATGCTTCTTTCTAGATGCTTTTGTTTTTGTAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| 3UTR CAA 72 bp | TTGTACCTGAGTGCACGAGAATGGTCAGGGAATACATaGACACAAGACAATGTTCTGAACAAAAGACATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LYLSAREWSGNT*TQDNVLNKRHV Trigger: TACATGTCTTTTGTTCAGAACATTGTCTTGTGTCAATGTATTCCCTGACCATTCTCGTGCACTCAGGTACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| 3UTR CAA 72 bp | AATTGGATCAAAGACCTCACCACAAAATTAGATTCATaGTACCTGAGTGCACGAGAATGGTCAGGGAATACA | + |
|
Preference number: 4 (lower is better) Translates to: NWIKDLTTKLDS*YLSAREWSGNT Trigger: TGTATTCCCTGACCATTCTCGTGCACTCAGGTACAATGAATCTAATTTTGTGGTGAGGTCTTTGATCCAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS-3UTR TCA 90 bp | TATTGGGCTGCCTTGTCCATCCTTGATATAATGAGTCTTGGCTTATCTTATTGTTATCTCCATAGACAATaGCAACTTTTGCTGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: YWAALSILDIMSLGLSYCYLHRQ*QLLLMT Trigger: TGTCATCAGCAAAAGTTGTCATTGTCTATGGAGATA...ACAATAAGATAAGCCAAGACTCATTATATCAAGGATGGACAAGGCAGCCCAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| 3UTR CAA 72 bp | ATATGGCAATTTCTGAGAAAACTGGGAATAGATCTATaGCCAACTCTGTCTATACCACTCTTGTATATTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IWQFLRKLGIDL*PTLSIPLLYIC Trigger: GCAAATATACAAGAGTGGTATAGACAGAGTTGGCAATAGATCTATTCCCAGTTTTCTCAGAAATTGCCATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS-3UTR CAA 90 bp | AAGGAAGGCCATTCAGAGACAGGCCCACCTGGGGATCCATCCCATATACAGCCATTAAGGGTCACCTTCTaGTCTAGATTCTCACTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KEGHSETGPPGDPSHIQPLRVTF*SRFSLK Trigger: CTTCAGTGAGAATCTAGACAAGAAGGTGACCCTTAA...TGGCTGTATATGGGATGGATCCCCAGGTGGGCCTGTCTCTGAATGGCCTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS TCA 90 bp | AACAATCAAAACAGCAGACGGCCTTTCCCTCCTGAAAGTATTTTCTaGGTCCTGGTCTGCAAGGTACACTACATGCGGAGGCTAGAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NNQNSRRPFPPESIF*VLVCKVHYMRRLES Trigger: AGACTCTAGCCTCCGCATGTAGTGTACCTTGCAGACCAGGACTCAGAAAATACTTTCAGGAGGGAAAGGCCGTCTGCTGTTTTGATTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000170835.4 ENSMUST00000233033.2 |
||
| CDS-3UTR CAA 90 bp | GCAGCTATACCACTCGTGGGCATATACACAGAAGATGCTCCAGCATGTAATAAGGTAAAGCTCTGGAGTTaGGGAGAAGTACAGGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: AAIPLVGIYTEDAPACNKVKLWS*GEVQEW Trigger: CCATTCCTGTACTTCTCCCAAACTCCAGAGCTTTAC...CTTATTACATGCTGGAGCATCTTCTGTGTATATGCCCACGAGTGGTATAGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS GCA 90 bp | CAAAATAAGGTAGCACTTTGGCACAAATATGCAAAGAAGCATCCCTaGACTGGAGGCCAATATACAGAAGACCTCCACAGCAACCATAGC | + |
|
Preference number: 5 (lower is better) Translates to: QNKVALWHKYAKKHP*TGGQYTEDLHSNHS Trigger: GCTATGGTTGCTGTGGAGGTCTTCTGTATATTGGCCTCCAGTGCAGGGATGCTTCTTTGCATATTTGTGCCAAAGTGCTACCTTATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170835.4 |
||
| CDS-3UTR CAA 90 bp | GCAGCTATACCACTCGTGGGCATATACACAGAAGATGCTCCAGCATGTAATAAGGCATGTGTCTACTTGTaGCAGAAGCATCTCATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AAIPLVGIYTEDAPACNKACVYL*QKHLMK Trigger: CTTCATGAGATGCTTCTGCAACAAGTAGACACATGC...CTTATTACATGCTGGAGCATCTTCTGTGTATATGCCCACGAGTGGTATAGCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS TCA 90 bp | CAGACAGTGTTACTTTCCATTCCTGTTCTCAGTTCAGAAAGGAACTaGATTCCATGGTCATCATCTGTAATGATGACTCCTACCCAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: QTVLLSIPVLSSERN*IPWSSSVMMTPTQF Trigger: GAACTGGGTAGGAGTCATCATTACAGATGATGACCATGGAATTCAGTTCCTTTCTGAACTGAGAACAGGAATGGAAAGTAACACTGTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170835.4 ENSMUST00000233033.2 |
||
| CDS CCA 90 bp | TTTCTTGAGGCAGTTAGTTTGATCAGTGTTGGCATACTCATCCTCTaGACACTTCACACATTGATCCATGTCTGTCATGTTGGAAATTTC | + |
|
Preference number: 5 (lower is better) Translates to: FLEAVSLISVGILIL*TLHTLIHVCHVGNF Trigger: GAAATTTCCAACATGACAGACATGGATCAATGTGTGAAGTGTCCAGAGGATGAGTATGCCAACACTGATCAAACTAACTGCCTCAAGAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170835.4 |
||
| CDS-3UTR CAA 90 bp | CTGTTTAATTGGATCAAAGACCTCACCACAAAATTAGATTCATTGTACCTGAGTAATGGTTCTGTCATGTaGGAAATTTCGTTTTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: LFNWIKDLTTKLDSLYLSNGSVM*EISFSG Trigger: CCCAGAAAACGAAATTTCCAACATGACAGAACCATT...ACTCAGGTACAATGAATCTAATTTTGTGGTGAGGTCTTTGATCCAATTAAACAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS-3UTR CAA 90 bp | CTGTTTAATTGGATCAAAGACCTCACCACAAAATTAGATTCATTGTACCTGAGTACAGTTGTTGACCATTaGGAAAATGACCAGAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: LFNWIKDLTTKLDSLYLSTVVDH*ENDQKI Trigger: GATTTTCTGGTCATTTTCCAAATGGTCAACAACTGT...ACTCAGGTACAATGAATCTAATTTTGTGGTGAGGTCTTTGATCCAATTAAACAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233033.2 |
||
| CDS TCA 72 bp | AACAGCAGACGGCCTTTCCCTCCTGAAAGTATTTTCTaGGTCCTGGTCTGCAAGGTACACTACATGCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NSRRPFPPESIF*VLVCKVHYMRR Trigger: CCTCCGCATGTAGTGTACCTTGCAGACCAGGACTCAGAAAATACTTTCAGGAGGGAAAGGCCGTCTGCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000170835.4 ENSMUST00000233033.2 |
||
| CDS TCA 72 bp | ACGTGTCAGGGAGATTCCTGGCTAGGAAAGCCACAGTaGAACTTGCAAGAGCAAGAGAGCCCATGTATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TCQGDSWLGKPQ*NLQEQESPCIP Trigger: TGGGATACATGGGCTCTCTTGCTCTTGCAAGTTTCACTGTGGCTTTCCTAGCCAGGAATCTCCCTGACACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170835.4 |
||
| CDS CAA 72 bp | GGCAGCCACAGTGAACACAAGGGCAAATGTGGTCTGTaGCAGGATGCAGCTAACCATAGTGGGATAACCAAT | + |
|
Preference number: 6 (lower is better) Translates to: GSHSEHKGKCGL*QDAANHSGITN Trigger: ATTGGTTATCCCACTATGGTTAGCTGCATCCTGCAACAGACCACATTTGCCCTTGTGTTCACTGTGGCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170835.4 |
||
| CDS CAA 90 bp | GACACAAGAGGCAGCCACAGTGAACACAAGGGCAAATGTGGTCTGTaGCAGGATGCAGCTAACCATAGTGGGATAACCAATGTAGAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: DTRGSHSEHKGKCGL*QDAANHSGITNVEQ Trigger: TTGCTCTACATTGGTTATCCCACTATGGTTAGCTGCATCCTGCAACAGACCACATTTGCCCTTGTGTTCACTGTGGCTGCCTCTTGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170835.4 |
||
| CDS GCA 72 bp | GTAGCACTTTGGCACAAATATGCAAAGAAGCATCCCTaGACTGGAGGCCAATATACAGAAGACCTCCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: VALWHKYAKKHP*TGGQYTEDLHS Trigger: GCTGTGGAGGTCTTCTGTATATTGGCCTCCAGTGCAGGGATGCTTCTTTGCATATTTGTGCCAAAGTGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170835.4 |
||
| CDS CCA 72 bp | ACTTTGGCACAAATATGCAAAGAAGCATCCCTGCACTaGAGGCCAATATACAGAAGACCTCCACAGCAACCA | + |
|
Preference number: 6 (lower is better) Translates to: TLAQICKEASLH*RPIYRRPPQQP Trigger: TGGTTGCTGTGGAGGTCTTCTGTATATTGGCCTCCAGTGCAGGGATGCTTCTTTGCATATTTGTGCCAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170835.4 |
||
| CDS TCA 72 bp | TCTGAGCATGTGTCTACTTGTTGCAGAAGCATCTCATaGAGTGAGTGGGCCACAGCATACACAGAATTGTAT | + |
|
Preference number: 6 (lower is better) Translates to: SEHVSTCCRSIS*SEWATAYTELY Trigger: ATACAATTCTGTGTATGCTGTGGCCCACTCACTTCATGAGATGCTTCTGCAACAAGTAGACACATGCTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170835.4 ENSMUST00000233033.2 |
||
| CDS TCA 72 bp | TCCAGAAAGGTCACAACTTTCTTGAGGCAGTTAGTTTaGTCAGTGTTGGCATACTCATCCTCTGGACACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SRKVTTFLRQLV*SVLAYSSSGHF Trigger: GAAGTGTCCAGAGGATGAGTATGCCAACACTGATCAAACTAACTGCCTCAAGAAAGTTGTGACCTTTCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170835.4 |
||
| CDS CCA 72 bp | CTGGACACTTCACACATTGATCCATGTCTGTCATGTTaGAAATTTCGTTTTCTGGGCAGGGGTAACAATCAA | + |
|
Preference number: 6 (lower is better) Translates to: LDTSHIDPCLSC*KFRFLGRGNNQ Trigger: TTGATTGTTACCCCTGCCCAGAAAACGAAATTTCCAACATGACAGACATGGATCAATGTGTGAAGTGTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170835.4 |
||
| CDS CAA 72 bp | ATCCAGAAAGGTCACAACTTTCTTGAGGCAGTTAGTTaGATCAGTGTTGGCATACTCATCCTCTGGACACTT | + |
|
Preference number: 6 (lower is better) Translates to: IQKGHNFLEAVS*ISVGILILWTL Trigger: AAGTGTCCAGAGGATGAGTATGCCAACACTGATCAAACTAACTGCCTCAAGAAAGTTGTGACCTTTCTGGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170835.4 |
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| CDS TCA 72 bp | CCAGGAATTAAATTCCATTACCGTTCCATCATTCTCTaGGCATGTGTCTACTTGTTGCAGAAGCATCTCATG | + |
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Preference number: 6 (lower is better) Translates to: PGIKFHYRSIIL*ACVYLLQKHLM Trigger: CATGAGATGCTTCTGCAACAAGTAGACACATGCTCAGAGAATGATGGAACGGTAATGGAATTTAATTCCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170835.4 ENSMUST00000233033.2 |
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| CDS TCA 72 bp | GTGTTGGCATACTCATCCTCTGGACACTTCACACATTaGTCCATGTCTGTCATGTTGGAAATTTCGTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: VLAYSSSGHFTH*SMSVMLEISFS Trigger: AGAAAACGAAATTTCCAACATGACAGACATGGATCAATGTGTGAAGTGTCCAGAGGATGAGTATGCCAACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170835.4 |
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| CDS CAA 72 bp | AGTGTTGGCATACTCATCCTCTGGACACTTCACACATaGATCCATGTCTGTCATGTTGGAAATTTCGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SVGILILWTLHT*IHVCHVGNFVF Trigger: GAAAACGAAATTTCCAACATGACAGACATGGATCAATGTGTGAAGTGTCCAGAGGATGAGTATGCCAACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170835.4 |
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| CDS CAA 72 bp | ACAGTGATCTTAAATGCTAAGACTACAGTAATTGTCTaGGCTAAGACACAAGAGGCAGCCACAGTGAACACA | + |
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Preference number: 6 (lower is better) Translates to: TVILNAKTTVIV*AKTQEAATVNT Trigger: TGTGTTCACTGTGGCTGCCTCTTGTGTCTTAGCCAAGACAATTACTGTAGTCTTAGCATTTAAGATCACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170835.4 |
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| CDS CAA 90 bp | TTCTTTGTAATCCAGAAAGGTCACAACTTTCTTGAGGCAGTTAGTTaGATCAGTGTTGGCATACTCATCCTCTGGACACTTCACACATTG | + |
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Preference number: 6 (lower is better) Translates to: FFVIQKGHNFLEAVS*ISVGILILWTLHTL Trigger: CAATGTGTGAAGTGTCCAGAGGATGAGTATGCCAACACTGATCAAACTAACTGCCTCAAGAAAGTTGTGACCTTTCTGGATTACAAAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170835.4 |
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| CDS TCA 72 bp | TTACTTTCCATTCCTGTTCTCAGTTCAGAAAGGAACTaGATTCCATGGTCATCATCTGTAATGATGACTCCT | + |
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Preference number: 6 (lower is better) Translates to: LLSIPVLSSERN*IPWSSSVMMTP Trigger: AGGAGTCATCATTACAGATGATGACCATGGAATTCAGTTCCTTTCTGAACTGAGAACAGGAATGGAAAGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000170835.4 ENSMUST00000233033.2 |
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