RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN2R76 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000091239

Ensembl transcript IDs: ENSMUST00000232799.2, ENSMUST00000233075.2, ENSMUST00000233231.2, ENSMUST00000233312.2, ENSMUST00000233317.2, ENSMUST00000233744.2, ENSMUST00000233928.2

Found 604 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTCCCTCAACTCCCAGAGGAAGCTCCAGTCCCATGTGCACTAACATaGCCAGTATCACAGGATCAGAGGTGCCCTGAGCAGACCTTGGGC +
Preference number: 1 (lower is better)
Translates to: VPQLPEEAPVPCALT*PVSQDQRCPEQTLG
Trigger: GCCCAAGGTCTGCTCAGGGCACCTCTGATCCTGTGATACTGGGCATGTTAGTGCACATGGGACTGGAGCTTCCTCTGGGAGTTGAGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 90 bp GGATCTCAGTGTTCCAGAGGCAGCTTGACTCCCACCCAGGAGCCCTaGCACGCCCAAGATTTCAGGTTCACAGGATATCAGAATCACAGG +
Preference number: 1 (lower is better)
Translates to: GSQCSRGSLTPTQEP*HAQDFRFTGYQNHR
Trigger: CCTGTGATTCTGATATCCTGTGAACCTGAAATCTTGGGCGTGTCAGGGCTCCTGGGTGGGAGTCAAGCTGCCTCTGGAACACTGAGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 90 bp TGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTaGGATTGCAAGCTGGTACAACCGCTCTGGAAATCAGTTTGGCGA +
Preference number: 1 (lower is better)
Translates to: CWRGCGERGTLLHCW*DCKLVQPLWKSVWR
Trigger: TCGCCAAACTGATTTCCAGAGCGGTTGTACCAGCTTGCAATCCCACCAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR GCA 90 bp AGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTaGTGGTGGGATTGCAAGCTGGTACAACCGCTCTGGAAATCAGTT +
Preference number: 1 (lower is better)
Translates to: SRCWRGCGERGTLLH*WWDCKLVQPLWKSV
Trigger: AACTGATTTCCAGAGCGGTTGTACCAGCTTGCAATCCCACCAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR GCA 90 bp CCAGTCCCATGTGCACTAACATGCCCAGTATCACAGGATCAGAGGTaGCCTGAGCAGACCTTGGGCACTAATTCCACAACCATTCTCACA +
Preference number: 1 (lower is better)
Translates to: PVPCALTCPVSQDQR*PEQTLGTNSTTILT
Trigger: TGTGAGAATGGTTGTGGAATTAGTGCCCAAGGTCTGCTCAGGGCACCTCTGATCCTGTGATACTGGGCATGTTAGTGCACATGGGACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 90 bp AGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTaGTGGGATTGCAAGCTGGTACAACCGCTCTGGAAATCAGTTTGG +
Preference number: 1 (lower is better)
Translates to: RCWRGCGERGTLLHC*WDCKLVQPLWKSVW
Trigger: CCAAACTGATTTCCAGAGCGGTTGTACCAGCTTGCAATCCCACCAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 90 bp CCACCATGTGTTTTCTTTGGTTGGTGGTTTAGTCCCAGGGAGCTCTaGAGGTCCTGGTTAGTTCACATTGCTGTTCCTCCTATGGGGCTG +
Preference number: 1 (lower is better)
Translates to: PPCVFFGWWFSPREL*RSWLVHIAVPPMGL
Trigger: CAGCCCCATAGGAGGAACAGCAATGTGAACTAACCAGGACCTCCAGAGCTCCCTGGGACTAAACCACCAACCAAAGAAAACACATGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 90 bp CCCACTAACTCCTGCTCCCTGGCCCTGGCATTCCCCTTAGACTGTTaGATAAAACCTTCTCAGGATCAAGGGCCTTTCCTTTCATTGATG +
Preference number: 1 (lower is better)
Translates to: PTNSCSLALAFPLDC*IKPSQDQGPFLSLM
Trigger: CATCAATGAAAGGAAAGGCCCTTGATCCTGAGAAGGTTTTATGCAACAGTCTAAGGGGAATGCCAGGGCCAGGGAGCAGGAGTTAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 90 bp ATTTCAGATGCTATCCCAAAAGTCTCCTATACTCGGCCCCTGCCCTaGTTCCCTACCCACCCACTTCCAATTCTTGGCTATGGCATTCCT +
Preference number: 1 (lower is better)
Translates to: ISDAIPKVSYTRPLP*FPTHPLPILGYGIP
Trigger: AGGAATGCCATAGCCAAGAATTGGAAGTGGGTGGGTAGGGAAGCAGGGCAGGGGCCGAGTATAGGAGACTTTTGGGATAGCATCTGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 90 bp GTCTCTACCAAAACCTGTGTCAGATTGATGCTCTCTGACTCCAGCTaGAGAGAGTCCAGAGGCAGTGACCTATCCCAGAATCGGGATCTA +
Preference number: 1 (lower is better)
Translates to: VSTKTCVRLMLSDSS*RESRGSDLSQNRDL
Trigger: TAGATCCCGATTCTGGGATAGGTCACTGCCTCTGGACTCTCTTCAGCTGGAGTCAGAGAGCATCAATCTGACACAGGTTTTGGTAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR GCA 90 bp TTTACATTTCAGATGCTATCCCAAAAGTCTCCTATACTCGGCCCCTaGCCTGCTTCCCTACCCACCCACTTCCAATTCTTGGCTATGGCA +
Preference number: 1 (lower is better)
Translates to: FTFQMLSQKSPILGP*PASLPTHFQFLAMA
Trigger: TGCCATAGCCAAGAATTGGAAGTGGGTGGGTAGGGAAGCAGGGCAGGGGCCGAGTATAGGAGACTTTTGGGATAGCATCTGAAATGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 90 bp TTAGTAAGACTGGCTAAGACCAAAAACAAGGGTGACAGCAGATGCTaGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTGG +
Preference number: 1 (lower is better)
Translates to: LVRLAKTKNKGDSRC*RGCGERGTLLHCWW
Trigger: CCACCAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACCCTTGTTTTTGGTCTTAGCCAGTCTTACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 90 bp ACAGTATTCACATTGATTCTTCTGGAGGAAGGGCCTCTTCTGACATaGTTGTCTTTCCTTTTGGGGGTGGGCCTGGTGTGCCACTTCTCT +
Preference number: 1 (lower is better)
Translates to: TVFTLILLEEGPLLT*LSFLLGVGLVCHFS
Trigger: AGAGAAGTGGCACACCAGGCCCACCCCCAAAAGGAAAGACAACCATGTCAGAAGAGGCCCTTCCTCCAGAAGAATCAATGTGAATACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 90 bp CTTGGGTACTTTCTAGCTCCACTGTGGACCCTGTGCTCTGTCCAATaGATGACTGTGAGCTTCCACATATGTATTTGTCAGGCACTGGCA +
Preference number: 1 (lower is better)
Translates to: LGYFLAPLWTLCSVQ*MTVSFHICICQALA
Trigger: TGCCAGTGCCTGACAAATACATATGTGGAAGCTCACAGTCATCCATTGGACAGAGCACAGGGTCCACAGTGGAGCTAGAAAGTACCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 90 bp GGCTCAACCTGGATTACAGGAAGGCCAGGCTCCAATCAGATATATTaGGGGCAGGATGCATTTGAGATAATCAGATGGCAGGAGGCAAGT +
Preference number: 1 (lower is better)
Translates to: GSTWITGRPGSNQIY*GQDAFEIIRWQEAS
Trigger: ACTTGCCTCCTGCCATCTGATTATCTCAAATGCATCCTGCCCTCAATATATCTGATTGGAGCCTGGCCTTCCTGTAATCCAGGTTGAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 90 bp CCAGGAGCTTGGTCACACCAGGATCTCAGGGTCTCAGAGAAACTTTaGCTGTCAAGAACTCTGAGACACCAAGAATCTCAGGATCATAGG +
Preference number: 1 (lower is better)
Translates to: PGAWSHQDLRVSEKL*LSRTLRHQESQDHR
Trigger: CCTATGATCCTGAGATTCTTGGTGTCTCAGAGTTCTTGACAGTCAAAGTTTCTCTGAGACCCTGAGATCCTGGTGTGACCAAGCTCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR GCA 90 bp CACTTATCTCTAACCCCTACACATAACATTCCCCTCGTTCCCGTTTaGCTCTGTGAGGGTGCTCCTCCACTCACACTCTCATTTCTCATT +
Preference number: 1 (lower is better)
Translates to: HLSLTPTHNIPLVPV*LCEGAPPLTLSFLI
Trigger: AATGAGAAATGAGAGTGTGAGTGGAGGAGCACCCTCACAGAGGCAAACGGGAACGAGGGGAATGTTATGTGTAGGGGTTAGAGATAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 90 bp CTCTTGTTGGCATCCACAATAGTGTCTGGTATTGGTGGTTGTTCATaGGATGGATCCCCAGGTGGGGCAGTCTCTAAATCCATTGTAGTG +
Preference number: 1 (lower is better)
Translates to: LLLASTIVSGIGGCS*DGSPGGAVSKSIVV
Trigger: CACTACAATGGATTTAGAGACTGCCCCACCTGGGGATCCATCCCATGAACAACCACCAATACCAGACACTATTGTGGATGCCAACAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 90 bp CCACTGGCCTTTTCCAAGGGCTTAGGGACTCAGTCAATTCCCCTTTaGCTTTGCCTTTGTTCTCATCTGTTTCCAGGTGGAAAGGCTTAT +
Preference number: 1 (lower is better)
Translates to: PLAFSKGLGTQSIPL*LCLCSHLFPGGKAY
Trigger: ATAAGCCTTTCCACCTGGAAACAGATGAGAACAAAGGCAAAGCCAAAGGGGAATTGACTGAGTCCCTAAGCCCTTGGAAAAGGCCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 90 bp AGGGTTTCGCTTTCCTGGAACTCACTCTGTAGACCAGACTGGTCTTaGACTCAGAAATCTGCCTGCATCTGCTTCACAAGTGCTGAGATT +
Preference number: 1 (lower is better)
Translates to: RVSLSWNSLCRPDWS*TQKSACICFTSAEI
Trigger: AATCTCAGCACTTGTGAAGCAGATGCAGGCAGATTTCTGAGTTCAAGACCAGTCTGGTCTACAGAGTGAGTTCCAGGAAAGCGAAACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 90 bp ACCTTGGGCACTAATTCCACAACCATTCTCACAAAACTCAGAAAATaGTACAATCCCGGGTACTCTGGCATGCCCGAATCCACAGGATCA +
Preference number: 1 (lower is better)
Translates to: TLGTNSTTILTKLRK*YNPGYSGMPESTGS
Trigger: TGATCCTGTGGATTCGGGCATGCCAGAGTACCCGGGATTGTAGCATTTTCTGAGTTTTGTGAGAATGGTTGTGGAATTAGTGCCCAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 90 bp GACCTGGGTTGGACTGGATCTCTCCATCTCCAACTCAAGGAGGTTTaGGAGTATCCTTTGAATGAACCCTGTTTAGGAACAAGTTGTCAG +
Preference number: 1 (lower is better)
Translates to: DLGWTGSLHLQLKEV*EYPLNEPCLGTSCQ
Trigger: CTGACAACTTGTTCCTAAACAGGGTTCATTCAAAGGATACTCCCAAACCTCCTTGAGTTGGAGATGGAGAGATCCAGTCCAACCCAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 90 bp AACCATTCTCACAAAACTCAGAAAATGCTACAATCCCGGGTACTCTaGCATGCCCGAATCCACAGGATCACAGGATGTCAGGATCTTGGT +
Preference number: 1 (lower is better)
Translates to: NHSHKTQKMLQSRVL*HARIHRITGCQDLG
Trigger: ACCAAGATCCTGACATCCTGTGATCCTGTGGATTCGGGCATGCCAGAGTACCCGGGATTGTAGCATTTTCTGAGTTTTGTGAGAATGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 90 bp ATGCCAACAAGAGCTTGCTGGCACGAGACTGATATAGCTGTCTCCTaGGGGGCTCTGCTATTTCCTGGAAAATATAGAAATGGTTGCTCA +
Preference number: 1 (lower is better)
Translates to: MPTRACWHETDIAVS*GALLFPGKYRNGCS
Trigger: TGAGCAACCATTTCTATATTTTCCAGGAAATAGCAGAGCCCCTCAGGAGACAGCTATATCAGTCTCGTGCCAGCAAGCTCTTGTTGGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 90 bp GGATTGTCTCTTGTCTGGCCTGGGATAGCAGGCATTGCCTTATCTTaGGTATGTACTAGTCATCAAACAGCATGTGTCTTCAACTGGAGC +
Preference number: 1 (lower is better)
Translates to: GLSLVWPGIAGIALS*VCTSHQTACVFNWS
Trigger: GCTCCAGTTGAAGACACATGCTGTTTGATGACTAGTACATACTCAAGATAAGGCAATGCCTGCTATCCCAGGCCAGACAAGAGACAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 90 bp TGGGAGTGTCTTGGTTCCTTAAAAAGATACCAAATACAGCAGCTGTaGGAGCAGAAAACCCTAGTGCCAAACAAGCCAGAACCACTCCCA +
Preference number: 1 (lower is better)
Translates to: WECLGSLKRYQIQQL*EQKTLVPNKPEPLP
Trigger: TGGGAGTGGTTCTGGCTTGTTTGGCACTAGGGTTTTCTGCTCTCACAGCTGCTGTATTTGGTATCTTTTTAAGGAACCAAGACACTCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR CCA 90 bp GGAATAGAAGCAATCTGTCAGCTTCTACTAAGACCTGGGTTGGACTaGATCTCTCCATCTCCAACTCAAGGAGGTTTGGGAGTATCCTTT +
Preference number: 1 (lower is better)
Translates to: GIEAICQLLLRPGLD*ISPSPTQGGLGVSF
Trigger: AAAGGATACTCCCAAACCTCCTTGAGTTGGAGATGGAGAGATCCAGTCCAACCCAGGTCTTAGTAGAAGCTGACAGATTGCTTCTATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 90 bp ATCTCTCCATCTCCAACTCAAGGAGGTTTGGGAGTATCCTTTGAATaGACCCTGTTTAGGAACAAGTTGTCAGTACATCTGTCCTGCCTC +
Preference number: 1 (lower is better)
Translates to: ISPSPTQGGLGVSFE*TLFRNKLSVHLSCL
Trigger: GAGGCAGGACAGATGTACTGACAACTTGTTCCTAAACAGGGTTCATTCAAAGGATACTCCCAAACCTCCTTGAGTTGGAGATGGAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 90 bp ATCAGAATCACAGGATCACAGAGACAGGTGCACTCTGAGGAGTTCTaGGACAAACAGGATAAAAGGAAGGACAGGCTCCAGTCTGATATA +
Preference number: 1 (lower is better)
Translates to: IRITGSQRQVHSEEF*DKQDKRKDRLQSDI
Trigger: TATATCAGACTGGAGCCTGTCCTTCCTTTTATCCTGTTTGTCTCAGAACTCCTCAGAGTGCACCTGTCTCTGTGATCCTGTGATTCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 90 bp AATCCCACCAGCAATGGAGGAGTGTTCCTCTTTCTCCCTATCCTCTaGAGCATCTACTGTCACCTGAATTTTTATCTTAGCCATTCTGAC +
Preference number: 1 (lower is better)
Translates to: NPTSNGGVFLFLPIL*SIYCHLNFYLSHSD
Trigger: GTCAGAATGGCTAAGATAAAAATTCAGGTGACAGTAGATGCTGCAGAGGATAGGGAGAAAGAGGAACACTCCTCCATTGCTGGTGGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 90 bp CCCAGACGCTCAGAATCCTTCTTAGAAGGGGGAACAAAGTACACATaGCAGGAGTTAAAGAGACAAAGTTTGAAGCAGAGACTGAAGGAA +
Preference number: 1 (lower is better)
Translates to: PRRSESFLEGGTKYT*QELKRQSLKQRLKE
Trigger: TTCCTTCAGTCTCTGCTTCAAACTTTGTCTCTTTAACTCCTGCCATGTGTACTTTGTTCCCCCTTCTAAGAAGGATTCTGAGCGTCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 90 bp TGCTGGTGGGATTGCAAGCTGGTACAACCGCTCTGGAAATCAGTTTaGCGATTCCTCAGAAAATTGGGCAAAGTTTTACTGAAAGATCCA +
Preference number: 1 (lower is better)
Translates to: CWWDCKLVQPLWKSV*RFLRKLGKVLLKDP
Trigger: TGGATCTTTCAGTAAAACTTTGCCCAATTTTCTGAGGAATCGCCAAACTGATTTCCAGAGCGGTTGTACCAGCTTGCAATCCCACCAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 90 bp TCAGGACTGGCTGAGGTGGGAGTGCTGAGTTCTGATGATGTTGAGTaGTCTTGGTTTCTGTTATTAAGATTCTTACGTTTGCCTTTTGCC +
Preference number: 1 (lower is better)
Translates to: SGLAEVGVLSSDDVE*SWFLLLRFLRLPFA
Trigger: GGCAAAAGGCAAACGTAAGAATCTTAATAACAGAAACCAAGACCACTCAACATCATCAGAACTCAGCACTCCCACCTCAGCCAGTCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 90 bp AGGAAGGCCAGGCTCCAATCAGATATATTGAGGGCAGGATGCATTTaGGATAATCAGATGGCAGGAGGCAAGTATAAGAACAGAAGTAAC +
Preference number: 1 (lower is better)
Translates to: RKARLQSDILRAGCI*DNQMAGGKYKNRSN
Trigger: GTTACTTCTGTTCTTATACTTGCCTCCTGCCATCTGATTATCTCAAATGCATCCTGCCCTCAATATATCTGATTGGAGCCTGGCCTTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 90 bp GTATTCCAGGCTAGACAAGGGACCAGTATCCCTTGTTCCCAGAGTTaGGTTATGTGTGGCATTATTTCCAAACTCACCTTTCTAGGCATT +
Preference number: 1 (lower is better)
Translates to: VFQARQGTSIPCSQS*VMCGIISKLTFLGI
Trigger: AATGCCTAGAAAGGTGAGTTTGGAAATAATGCCACACATAACTCAACTCTGGGAACAAGGGATACTGGTCCCTTGTCTAGCCTGGAATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 90 bp TTTCAGGTTCACAGGATATCAGAATCACAGGATCACAGAGACAGGTaGACTCTGAGGAGTTCTGAGACAAACAGGATAAAAGGAAGGACA +
Preference number: 1 (lower is better)
Translates to: FQVHRISESQDHRDR*TLRSSETNRIKGRT
Trigger: TGTCCTTCCTTTTATCCTGTTTGTCTCAGAACTCCTCAGAGTGCACCTGTCTCTGTGATCCTGTGATTCTGATATCCTGTGAACCTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 90 bp CCCAGAATCACAAAATCACAGAGAAAGATAGATTCTGAGGAGTTCTaGCTCAACCTGGATTACAGGAAGGCCAGGCTCCAATCAGATATA +
Preference number: 1 (lower is better)
Translates to: PRITKSQRKIDSEEF*LNLDYRKARLQSDI
Trigger: TATATCTGATTGGAGCCTGGCCTTCCTGTAATCCAGGTTGAGCCAGAACTCCTCAGAATCTATCTTTCTCTGTGATTTTGTGATTCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 90 bp CACTTGTACAGTTTTAGGGTGGTAGCCATTAACACCCAGAACCAATaGGCTGATGCCACCACTCATTCTAATTGTTCAGTCAGAAGAGTA +
Preference number: 1 (lower is better)
Translates to: HLYSFRVVAINTQNQ*ADATTHSNCSVRRV
Trigger: TACTCTTCTGACTGAACAATTAGAATGAGTGGTGGCATCAGCCCATTGGTTCTGGGTGTTAATGGCTACCACCCTAAAACTGTACAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 90 bp GAACCACTCCCATGGGGTCTTCATAAGACAGGAATGTCACAATTTTaGAGAGACAGTGCGTTCCTTCTGGATTGGCATATTGATTATCTG +
Preference number: 1 (lower is better)
Translates to: EPLPWGLHKTGMSQF*RDSAFLLDWHIDYL
Trigger: CAGATAATCAATATGCCAATCCAGAAGGAACGCACTGTCTCTCCAAAATTGTGACATTCCTGTCTTATGAAGACCCCATGGGAGTGGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR TCA 90 bp GGCTATCATCCTAAGCGAGGTAACCCAATCACAAAAGAAGACACATaGTATGCACTAATGGATAAGTTGATACTAGCCCAGACGCTCAGA +
Preference number: 1 (lower is better)
Translates to: GYHPKRGNPITKEDT*YALMDKLILAQTLR
Trigger: TCTGAGCGTCTGGGCTAGTATCAACTTATCCATTAGTGCATATCATGTGTCTTCTTTTGTGATTGGGTTACCTCGCTTAGGATGATAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 90 bp TCGAACTTTAGGGTTACACATGGCTTATGGAGGGGTCATGAGCCTTaGCACCCTCAGTCACTCAGTTCTTTTATTTCTAAGACCTTTGAT +
Preference number: 1 (lower is better)
Translates to: SNFRVTHGLWRGHEP*HPQSLSSFISKTFD
Trigger: ATCAAAGGTCTTAGAAATAAAAGAACTGAGTGACTGAGGGTGTCAAGGCTCATGACCCCTCCATAAGCCATGTGTAACCCTAAAGTTCGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 90 bp TGGAGCATGTGCCCTTATTACCATTTGGAACATATTCTGGATATTTaGCCAGGAGAGGTATTGCTGGATCATTCGGTAGTACTATGTCCA +
Preference number: 1 (lower is better)
Translates to: WSMCPYYHLEHILDI*PGEVLLDHSVVLCP
Trigger: TGGACATAGTACTACCGAATGATCCAGCAATACCTCTCCTGGGCAAATATCCAGAATATGTTCCAAATGGTAATAAGGGCACATGCTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 90 bp CTTGAAACAATAATCCATGTCTGTCATATTGGAAATCTCATTCTCTaGGCAGGGGATACAATCAAAGCAACAGACAGCCTTTCCCTCCTG +
Preference number: 1 (lower is better)
Translates to: LETIIHVCHIGNLIL*AGDTIKATDSLSLL
Trigger: CAGGAGGGAAAGGCTGTCTGTTGCTTTGATTGTATCCCCTGCCCAGAGAATGAGATTTCCAATATGACAGACATGGATTATTGTTTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR TCA 90 bp CAGATGTCATATCTTTGCATTTCTTCTCTCAATTCAGAGGCAAATTaGAGTCCTAGACCGTCATCTGAAATCATCAGTCCCACCCAGTTC +
Preference number: 1 (lower is better)
Translates to: QMSYLCISSLNSEAN*SPRPSSEIISPTQF
Trigger: GAACTGGGTGGGACTGATGATTTCAGATGACGGTCTAGGACTTCAATTTGCCTCTGAATTGAGAGAAGAAATGCAAAGATATGACATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR GCA 90 bp ACACACACACACATACACACACAAACACATTGTGCAGCATATAAATaGTGGATAGAGATTCATGAACAAGCCAGAAGACAGTGTCTGCTG +
Preference number: 1 (lower is better)
Translates to: THTHIHTQTHCAAYK*WIEIHEQARRQCLL
Trigger: CAGCAGACACTGTCTTCTGGCTTGTTCATGAATCTCTATCCAGCATTTATATGCTGCACAATGTGTTTGTGTGTGTATGTGTGTGTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 90 bp TCCCTGAGGTGGGATTCCTGTAAGCAACAAAATGTTGGGTCCTGTTaGTGTAGCCAGTCTATTAGTCTATGTCTTTTTATTAGGGAAATG +
Preference number: 1 (lower is better)
Translates to: SLRWDSCKQQNVGSC*CSQSISLCLFIREM
Trigger: CATTTCCCTAATAAAAAGACATAGACTAATAGACTGGCTACACCAACAGGACCCAACATTTTGTTGCTTACAGGAATCCCACCTCAGGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 90 bp CAGAAGGAACTCTACCCAACTCTTTCTATGAGACCACACATAATCTaGTACCTAAACCACCCAAAGACCCAACAAAGAAAGAGAACTTCA +
Preference number: 1 (lower is better)
Translates to: QKELYPTLSMRPHII*YLNHPKTQQRKRTS
Trigger: TGAAGTTCTCTTTCTTTGTTGGGTCTTTGGGTGGTTTAGGTATCAGATTATGTGTGGTCTCATAGAAAGAGTTGGGTAGAGTTCCTTCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 90 bp CTGCATAACATCTATCCAGGATCTTCTGGCTTTCATAGTCTCTGGTaGAAAGTCTGGTGTAATTCTGATAGGCCTGCCTTTATATGTTAC +
Preference number: 1 (lower is better)
Translates to: LHNIYPGSSGFHSLW*KVWCNSDRPAFICY
Trigger: GTAACATATAAAGGCAGGCCTATCAGAATTACACCAGACTTTTCACCAGAGACTATGAAAGCCAGAAGATCCTGGATAGATGTTATGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 90 bp GCAAGGGCAGGTAGCACTGGAGAAAATCAAATGGTAGAAGGCAAGTaGGAGAACATAAGCAACATAAACCAAGGTTATTTGGCATCATTA +
Preference number: 1 (lower is better)
Translates to: ARAGSTGENQMVEGK*ENISNINQGYLASL
Trigger: TAATGATGCCAAATAACCTTGGTTTATGTTGCTTATGTTCTCTCACTTGCCTTCTACCATTTGATTTTCTCCAGTGCTACCTGCCCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 90 bp GAGATAGCTATATCAGTCTCCTTTCAACAAAATCATGCTGGCATATaGCATAGTGTCTGCATTTGGTTGATGATTATGGGATGCCTTGGT +
Preference number: 1 (lower is better)
Translates to: EIAISVSFQQNHAGI*HSVCIWLMIMGCLG
Trigger: ACCAAGGCATCCCATAATCATCAACCAAATGCAGACACTATGGCATATGCCAGCATGATTTTGTTGAAAGGAGACTGATATAGCTATCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 90 bp AACTCCAGTCCTTTCCCAACATTATTTGACAATGTATTTGCTTGCTaGAGAAGTAACTCATTGAGTGAATGGGCTACAGCATACACAGCA +
Preference number: 1 (lower is better)
Translates to: NSSPFPTLFDNVFAC*RSNSLSEWATAYTA
Trigger: TGCTGTGTATGCTGTAGCCCATTCACTCAATGAGTTACTTCTGCAGCAAGCAAATACATTGTCAAATAATGTTGGGAAAGGACTGGAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR GCA 90 bp CCAGCAGGATTTACAAAATGGATGTTCTTCAGGGAAGAGAGCACCTaGAAAGAATCAAACTCCAGTCCTTTCCCAACATTATTTGACAAT +
Preference number: 1 (lower is better)
Translates to: PAGFTKWMFFREEST*KESNSSPFPTLFDN
Trigger: ATTGTCAAATAATGTTGGGAAAGGACTGGAGTTTGATTCTTTGCAGGTGCTCTCTTCCCTGAAGAACATCCATTTTGTAAATCCTGCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR CCA 90 bp TTCTCCATCTTCCAATTGTATAGATCATTAGTGGAAAATGGGATGTaGATCCTATATTTTCTTCTCTGCCCATGGTGGAGGGCAGTTACT +
Preference number: 1 (lower is better)
Translates to: FSIFQLYRSLVENGM*ILYFLLCPWWRAVT
Trigger: AGTAACTGCCCTCCACCATGGGCAGAGAAGAAAATATAGGATCCACATCCCATTTTCCACTAATGATCTATACAATTGGAAGATGGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 90 bp ATCAGAGACACTGAGAATTACAGAGGAGAAAATGTGGAAGAACCTTaGATATTTGGGCAGAGGGGAAAGATTCATGAACAGAACAGCAAT +
Preference number: 1 (lower is better)
Translates to: IRDTENYRGENVEEP*IFGQRGKIHEQNSN
Trigger: ATTGCTGTTCTGTTCATGAATCTTTCCCCTCTGCCCAAATATTCAAGGTTCTTCCACATTTTCTCCTCTGTAATTCTCAGTGTCTCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 90 bp TGTAATCTTCTTCTCAGAACCTCCTCATGGTACCTTCTTCATAACTaGCCATATTATTGGTCACAAATCAGTCCTCAACACGTAGAGGAA +
Preference number: 1 (lower is better)
Translates to: CNLLLRTSSWYLLHN*PYYWSQISPQHVEE
Trigger: TTCCTCTACGTGTTGAGGACTGATTTGTGACCAATAATATGGTCAGTTATGAAGAAGGTACCATGAGGAGGTTCTGAGAAGAAGATTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 90 bp GACAGTGCGTTCCTTCTGGATTGGCATATTGATTATCTGGGCACTTaGAACAATAATCCATGTCTGTCATATTGGAAATCTCATTCTCTG +
Preference number: 1 (lower is better)
Translates to: DSAFLLDWHIDYLGT*NNNPCLSYWKSHSL
Trigger: CAGAGAATGAGATTTCCAATATGACAGACATGGATTATTGTTTCAAGTGCCCAGATAATCAATATGCCAATCCAGAAGGAACGCACTGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR GCA 90 bp TCCCACTGTGAGGTAGTAACCCAGATTCTTCGAATGTCTAAAAACTaGCACAGTCTAAAAATCACTTGTAGAAGAGAATCTTTGTCTCCA +
Preference number: 1 (lower is better)
Translates to: SHCEVVTQILRMSKN*HSLKITCRRESLSP
Trigger: TGGAGACAAAGATTCTCTTCTACAAGTGATTTTTAGACTGTGGCAGTTTTTAGACATTCGAAGAATCTGGGTTACTACCTCACAGTGGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR GCA 90 bp TCAAACTCCAGTCCTTTCCCAACATTATTTGACAATGTATTTGCTTaGTGCAGAAGTAACTCATTGAGTGAATGGGCTACAGCATACACA +
Preference number: 1 (lower is better)
Translates to: SNSSPFPTLFDNVFA*CRSNSLSEWATAYT
Trigger: TGTGTATGCTGTAGCCCATTCACTCAATGAGTTACTTCTGCAGCAAGCAAATACATTGTCAAATAATGTTGGGAAAGGACTGGAGTTTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR CCA 90 bp GAGAGAGAGAGAGAGAGAGATAGATCAATTGAGCCTATCACTAGATaGGTTTTGTGCAGAATTCTATCAGACCTTCAAAGAAGACCTAAT +
Preference number: 1 (lower is better)
Translates to: ERERERDRSIEPITR*VLCRILSDLQRRPN
Trigger: ATTAGGTCTTCTTTGAAGGTCTGATAGAATTCTGCACAAAACCCATCTAGTGATAGGCTCAATTGATCTATCTCTCTCTCTCTCTCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 90 bp TTTGGAGAGACAGTGCGTTCCTTCTGGATTGGCATATTGATTATCTaGGCACTTGAAACAATAATCCATGTCTGTCATATTGGAAATCTC +
Preference number: 1 (lower is better)
Translates to: FGETVRSFWIGILII*ALETIIHVCHIGNL
Trigger: GAGATTTCCAATATGACAGACATGGATTATTGTTTCAAGTGCCCAGATAATCAATATGCCAATCCAGAAGGAACGCACTGTCTCTCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR TCA 90 bp AATGAATGTGGCTGCCCTTGTGTTTGGAGCATAGATATTCAGAATTaGCAGTTCCTCTTGGAACATTTTACCTTTGATGAGTATGAAGTG +
Preference number: 1 (lower is better)
Translates to: NECGCPCVWSIDIQN*QFLLEHFTFDEYEV
Trigger: CACTTCATACTCATCAAAGGTAAAATGTTCCAAGAGGAACTGTCAATTCTGAATATCTATGCTCCAAACACAAGGGCAGCCACATTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 90 bp TCCATTTGTGAGAGTAGGGTATTGAAGTCTCCCACTATTATTGTGTaGGGTGCAATGTGTGCGTTGAGCTTTACTAAAGTTTCTTTAATG +
Preference number: 1 (lower is better)
Translates to: SICESRVLKSPTIIV*GAMCALSFTKVSLM
Trigger: CATTAAAGAAACTTTAGTAAAGCTCAACGCACACATTGCACCTCACACAATAATAGTGGGAGACTTCAATACCCTACTCTCACAAATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 90 bp AAGAATTCTTCTTTCTCCACATCCTGGTCACCACTAGTTGTTACCTaGGTTTTTGATCTTAGCCATTCTGAGTGGTGTGATTTGTATTTC +
Preference number: 1 (lower is better)
Translates to: KNSSFSTSWSPLVVT*VFDLSHSEWCDLYF
Trigger: GAAATACAAATCACACCACTCAGAATGGCTAAGATCAAAAACTCAGGTAACAACTAGTGGTGACCAGGATGTGGAGAAAGAAGAATTCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 90 bp TGCAATAGAGCCCAAATATCCCAGGACACAGTAGAAGGCAATAACTaGACCTTTGTTGCAAACAACCAAAATATGACCATGTTCAATATG +
Preference number: 1 (lower is better)
Translates to: CNRAQISQDTVEGNN*TFVANNQNMTMFNM
Trigger: CATATTGAACATGGTCATATTTTGGTTGTTTGCAACAAAGGTTCAGTTATTGCCTTCTACTGTGTCCTGGGATATTTGGGCTCTATTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR CCA 90 bp ATAAGACAGGAATGTCACAATTTTGGAGAGACAGTGCGTTCCTTCTaGATTGGCATATTGATTATCTGGGCACTTGAAACAATAATCCAT +
Preference number: 1 (lower is better)
Translates to: IRQECHNFGETVRSF*IGILIIWALETIIH
Trigger: ATGGATTATTGTTTCAAGTGCCCAGATAATCAATATGCCAATCCAGAAGGAACGCACTGTCTCTCCAAAATTGTGACATTCCTGTCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR CCA 90 bp CAAAATATGACCATGTTCAATATGCCCATCACTATCAACAAATGGTaGAGAAGTTCCCAGCCAGATTCCACAAATAATCAGTTGGATCAT +
Preference number: 1 (lower is better)
Translates to: QNMTMFNMPITINKW*RSSQPDSTNNQLDH
Trigger: ATGATCCAACTGATTATTTGTGGAATCTGGCTGGGAACTTCTCCACCATTTGTTGATAGTGATGGGCATATTGAACATGGTCATATTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR GCA 90 bp AAGACAGTAGAGATAGCAACAGTAAATACAACTGCAAATATGGTCTaGTGCATAATGCATGTGAGAATATGTGGTTGTCCAATGAATAGC +
Preference number: 1 (lower is better)
Translates to: KTVEIATVNTTANMV*CIMHVRICGCPMNS
Trigger: GCTATTCATTGGACAACCACATATTCTCACATGCATTATGCAGCAGACCATATTTGCAGTTGTATTTACTGTTGCTATCTCTACTGTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR GCA 90 bp AATTGTCTTGGTCAAGACAGTAGAGATAGCAACAGTAAATACAACTaGAAATATGGTCTGCTGCATAATGCATGTGAGAATATGTGGTTG +
Preference number: 1 (lower is better)
Translates to: NCLGQDSRDSNSKYN*KYGLLHNACENMWL
Trigger: CAACCACATATTCTCACATGCATTATGCAGCAGACCATATTTGCAGTTGTATTTACTGTTGCTATCTCTACTGTCTTGACCAAGACAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR CCA 90 bp AGTGTGTCAGTTTTATTTAATTGTTGGGCCCTTGTAGAATACCTTTaGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTA +
Preference number: 1 (lower is better)
Translates to: SVSVLFNCWALVEYL*FSGLTYLRALLQHV
Trigger: TACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACAAGGGCCCAACAATTAAATAAAACTGACACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
3UTR TCA 90 bp GGGCATGTGTATATAACACATTGGCTGAAAACCTTAATAGTTGCTTaGTATATTTATCACCTCAATGGGAATGCTTTTAAGAGGATTGCG +
Preference number: 1 (lower is better)
Translates to: GHVYITHWLKTLIVA*YIYHLNGNAFKRIA
Trigger: CGCAATCCTCTTAAAAGCATTCCCATTGAGGTGATAAATATATCAAGCAACTATTAAGGTTTTCAGCCAATGTGTTATATACACATGCCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR TCA 90 bp CAACATTATTTGACAATGTATTTGCTTGCTGCAGAAGTAACTCATTaGGTGAATGGGCTACAGCATACACAGCATTGTATAGGTTATAAC +
Preference number: 1 (lower is better)
Translates to: QHYLTMYLLAAEVTH*VNGLQHTQHCIGYN
Trigger: GTTATAACCTATACAATGCTGTGTATGCTGTAGCCCATTCACTCAATGAGTTACTTCTGCAGCAAGCAAATACATTGTCAAATAATGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR CCA 90 bp CTACAGCATACACAGCATTGTATAGGTTATAACTTGTGTCACTCATaGACATTTCAAAGTGGTTTCTGGATAACCATTTCAGCAACATTT +
Preference number: 1 (lower is better)
Translates to: LQHTQHCIGYNLCHS*TFQSGFWITISATF
Trigger: AAATGTTGCTGAAATGGTTATCCAGAAACCACTTTGAAATGTCCATGAGTGACACAAGTTATAACCTATACAATGCTGTGTATGCTGTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR TCA 90 bp TGCATACATTGGTCTTCCTTCTTGATTTTCTTGTGTTTTGCAAATTaGATCTTGGGTATTCTAAGTTTCTGGGCTAATATCCACTCATCA +
Preference number: 1 (lower is better)
Translates to: CIHWSSFLIFLCFAN*ILGILSFWANIHSS
Trigger: TGATGAGTGGATATTAGCCCAGAAACTTAGAATACCCAAGATTCAATTTGCAAAACACAAGAAAATCAAGAAGGAAGACCAATGTATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 90 bp ACATCTGTGGCCCAGTCTACCAATTCCTCATACATAAGCAATTCTTaGGGATGTGTAAAGTATTTGAAAAACTTTCCTATTTTCACCTTA +
Preference number: 1 (lower is better)
Translates to: TSVAQSTNSSYISNS*GCVKYLKNFPIFTL
Trigger: TAAGGTGAAAATAGGAAAGTTTTTCAAATACTTTACACATCCTCAAGAATTGCTTATGTATGAGGAATTGGTAGACTGGGCCACAGATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR-3UTR CCA 90 bp ACAAGATGGCTCCCTGAGGTGTTCTGGCAGAGCCCTCCAGGGCAGACACCTCTCAGGGATTTGCAATGGTaGAACTGGGTAGAGAGGAGT +
Preference number: 2 (lower is better)
Translates to: TRWLPEVFWQSPPGQTPLRDLQW*NWVERS
Trigger: ACTCCTCTCTACCCAGTTCCACCATTGCAAATCCCT...GAGAGGTGTCTGCCCTGGAGGGCTCTGCCAGAACACCTCAGGGAGCCATCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 90 bp TACTCTGGCATGCCCGAATCCACAGGATCACAGGATGTCAGGATCTaGGTGACACCAGGATCTCAGTGTTCCAGAGGCAGCTTGACTCCC +
Preference number: 2 (lower is better)
Translates to: YSGMPESTGSQDVRI*VTPGSQCSRGSLTP
Trigger: GGGAGTCAAGCTGCCTCTGGAACACTGAGATCCTGGTGTCACCAAGATCCTGACATCCTGTGATCCTGTGGATTCGGGCATGCCAGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 90 bp CAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATaGCTGGTGGGATTGCAAGCTGGTACAACCGCTCTGGAAATCAGT +
Preference number: 2 (lower is better)
Translates to: QQMLARMWRKRNTPP*LVGLQAGTTALEIS
Trigger: ACTGATTTCCAGAGCGGTTGTACCAGCTTGCAATCCCACCAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp AGATGGCTCCCTGAGGTGTTCTGGCAGAGCCCTCCAGGGCAGACACCTCTCCTCAAAGGAAAGTTTCAATaGTGGGAGGGATTTGCAATG +
Preference number: 2 (lower is better)
Translates to: RWLPEVFWQSPPGQTPLLKGKFQ*WEGFAM
Trigger: CATTGCAAATCCCTCCCACCATTGAAACTTTCCTTT...GAGGAGAGGTGTCTGCCCTGGAGGGCTCTGCCAGAACACCTCAGGGAGCCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 90 bp ATACTCGGCCCCTGCCCTGCTTCCCTACCCACCCACTTCCAATTCTaGGCTATGGCATTCCTCTACACTCGGGCATATAAAGTTTGCAAG +
Preference number: 2 (lower is better)
Translates to: ILGPCPASLPTHFQF*AMAFLYTRAYKVCK
Trigger: CTTGCAAACTTTATATGCCCGAGTGTAGAGGAATGCCATAGCCAAGAATTGGAAGTGGGTGGGTAGGGAAGCAGGGCAGGGGCCGAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp AACACTTGGGTACCAGATCTCTCCTTCCAAGTAGCCACCAGTAGCTCTATGGCATTGGGCCCAGATCTGTaGCTGCCATGTGCAGAGAAG +
Preference number: 2 (lower is better)
Translates to: NTWVPDLSFQVATSSSMALGPDL*LPCAEK
Trigger: CTTCTCTGCACATGGCAGTCACAGATCTGGGCCCAA...TGCCATAGAGCTACTGGTGGCTACTTGGAAGGAGAGATCTGGTACCCAAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR GCA 90 bp CTTTGTCAGCAGACCTGGGATTCTAGCTCTATCCTGAGTCTCAGTGGTCAGAGTCCAGGTATGCATCTTTaGCAGTGTTTGGGGGAGGGG +
Preference number: 2 (lower is better)
Translates to: LCQQTWDSSSILSLSGQSPGMHL*QCLGEG
Trigger: CCCCTCCCCCAAACACTGGCAAAGATGCATACCTGG...ACTCTGACCACTGAGACTCAGGATAGAGCTAGAATCCCAGGTCTGCTGACAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp CTTTGTCAGCAGACCTGGGATTCTAGCTCTATCCTGAGTCTCAGTGGTCAGAGTCCTATCTACCTCCCTTaGGCCCAGATCTGTGACTGC +
Preference number: 2 (lower is better)
Translates to: LCQQTWDSSSILSLSGQSPIYLP*AQICDC
Trigger: GCAGTCACAGATCTGGGCCCAAGGGAGGTAGATAGG...ACTCTGACCACTGAGACTCAGGATAGAGCTAGAATCCCAGGTCTGCTGACAAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 90 bp GTATTCACATTGATTCTTCTGGAGGAAGGGCCTCTTCTGACATGGTaGTCTTTCCTTTTGGGGGTGGGCCTGGTGTGCCACTTCTCTTCC +
Preference number: 2 (lower is better)
Translates to: VFTLILLEEGPLLTW*SFLLGVGLVCHFSS
Trigger: GGAAGAGAAGTGGCACACCAGGCCCACCCCCAAAAGGAAAGACAACCATGTCAGAAGAGGCCCTTCCTCCAGAAGAATCAATGTGAATAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 90 bp CCTGTGCTCTGTCCAATGGATGACTGTGAGCTTCCACATATGTATTaGTCAGGCACTGGCAGAGCCTCTCAGGAGACAGCTATATCAGGC +
Preference number: 2 (lower is better)
Translates to: PVLCPMDDCELPHMY*SGTGRASQETAISG
Trigger: GCCTGATATAGCTGTCTCCTGAGAGGCTCTGCCAGTGCCTGACAAATACATATGTGGAAGCTCACAGTCATCCATTGGACAGAGCACAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR GCA 90 bp CTTTGTCAGCAGACCTGGGATTCTAGCTCTATCCTGAGTCTCAGTGGTCAGAGTAGACACTATGGCAGATaGCAACAAGAGCTTGCTGGC +
Preference number: 2 (lower is better)
Translates to: LCQQTWDSSSILSLSGQSRHYGR*QQELAG
Trigger: GCCAGCAAGCTCTTGTTGGCATCTGCCATAGTGTCT...ACTCTGACCACTGAGACTCAGGATAGAGCTAGAATCCCAGGTCTGCTGACAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp CTTTGTCAGCAGACCTGGGATTCTAGCTCTATCCTGAGTCTCAGTGGTCAGAGTTTTCAGCCAAGGAAATaGGCAGCAGGTCTCTCTAGG +
Preference number: 2 (lower is better)
Translates to: LCQQTWDSSSILSLSGQSFQPRK*AAGLSR
Trigger: CCTAGAGAGACCTGCTGCCCATTTCCTTGGCTGAAA...ACTCTGACCACTGAGACTCAGGATAGAGCTAGAATCCCAGGTCTGCTGACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp AAGGACAGGCTCCAGTCTGATATAGCAAGGGCAGGTAGCACTGGAGAAAATCAAATGCCCCAGTATAAGTaGATGCCAGGACCAGGAATG +
Preference number: 2 (lower is better)
Translates to: KDRLQSDIARAGSTGENQMPQYK*MPGPGM
Trigger: CATTCCTGGTCCTGGCATTCACTTATACTGGGGCAT...TTGATTTTCTCCAGTGCTACCTGCCCTTGCTATATCAGACTGGAGCCTGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp TTTCTACCCATAAGATTTCCAGGTATGCATCTTTGCCAGTGTTTGGGGGAGGGGTCTCCTCAGAGACTATaGAAGCCAGAAGATCCTGGG +
Preference number: 2 (lower is better)
Translates to: FLPIRFPGMHLCQCLGEGSPQRL*KPEDPG
Trigger: CCCAGGATCTTCTGGCTTTCATAGTCTCTGAGGAGA...CCCCTCCCCCAAACACTGGCAAAGATGCATACCTGGAAATCTTATGGGTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR GCA 90 bp TTTCTACCCATAAGATTTCCAGGTATGCATCTTTGCCAGTGTTTGGGGGAGGGGCCCAGTATAAGTGAATaGCAGGACCAGGAATGGGAG +
Preference number: 2 (lower is better)
Translates to: FLPIRFPGMHLCQCLGEGPSISE*QDQEWE
Trigger: CTCCCATTCCTGGTCCTGGCATTCACTTATACTGGG...CCCCTCCCCCAAACACTGGCAAAGATGCATACCTGGAAATCTTATGGGTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp ACTCCTATTATCCATAGGTTTAGTCTTCTCATTGTGTCCTGGATTTCCTGGATGTGCCAGGACCAGGAATaGGAGTACGGGGGTTGGGGA +
Preference number: 2 (lower is better)
Translates to: TPIIHRFSLLIVSWISWMCQDQE*EYGGWG
Trigger: TCCCCAACCCCCGTACTCCCATTCCTGGTCCTGGCA...CATCCAGGAAATCCAGGACACAATGAGAAGACTAAACCTATGGATAATAGGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 90 bp CATGTTGTCGTTCTACCTGTAGGGTTACAGACCCCTTCAGCTTCTTaGGTAATTTCTCTAGTTCCTCCACTGAGGGACCCTGTGTTCCAT +
Preference number: 2 (lower is better)
Translates to: HVVVLPVGLQTPSAS*VISLVPPLRDPVFH
Trigger: ATGGAACACAGGGTCCCTCAGTGGAGGAACTAGAGAAATTACCAAAGAAGCTGAAGGGGTCTGTAACCCTACAGGTAGAACGACAACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp ACTCCAGCTTGTATCTTTGCACCATTTGCGTGGAAAATTGCTTCCCAGCCTTTCATGGGCTTGGCCCAGTaGGTAGCAATATTGGGCTAT +
Preference number: 2 (lower is better)
Translates to: TPACIFAPFAWKIASQPFMGLAQ*VAILGY
Trigger: ATAGCCCAATATTGCTACTCACTGGGCCAAGCCCAT...GAAAGGCTGGGAAGCAATTTTCCACGCAAATGGTGCAAAGATACAAGCTGGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp CTTTGTCAGCAGACCTGGGATTCTAGCTCTATCCTGAGTCTCAGTGGTCAGAGTCTGGTACACAAAGTATaGAGAATCCAGCTGAACCCA +
Preference number: 2 (lower is better)
Translates to: LCQQTWDSSSILSLSGQSLVHKV*RIQLNP
Trigger: TGGGTTCAGCTGGATTCTTCATACTTTGTGTACCAG...ACTCTGACCACTGAGACTCAGGATAGAGCTAGAATCCCAGGTCTGCTGACAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR GCA 90 bp CTTTGTCAGCAGACCTGGGATTCTAGCTCTATCCTGAGTCTCAGTGGTCAGAGTAGGGGCTCAGACTTGTaGTTATCTTCAAATCCTTCC +
Preference number: 2 (lower is better)
Translates to: LCQQTWDSSSILSLSGQSRGSDL*LSSNPS
Trigger: GGAAGGATTTGAAGATAAGCACAAGTCTGAGCCCCT...ACTCTGACCACTGAGACTCAGGATAGAGCTAGAATCCCAGGTCTGCTGACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 90 bp TTCTGTGGAATAGAAGCAATCTGTCAGCTTCTACTAAGACCTGGGTaGGACTGGATCTCTCCATCTCCAACTCAAGGAGGTTTGGGAGTA +
Preference number: 2 (lower is better)
Translates to: FCGIEAICQLLLRPG*DWISPSPTQGGLGV
Trigger: TACTCCCAAACCTCCTTGAGTTGGAGATGGAGAGATCCAGTCCAACCCAGGTCTTAGTAGAAGCTGACAGATTGCTTCTATTCCACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 90 bp ATTAAAGGCGTGCACCACCACTACGGGGCTGGGACCTGTGTTCTTTaGTTGAATCAGGGTGTCACAGATTGCTTTAAGATTGAATGTTGG +
Preference number: 2 (lower is better)
Translates to: IKGVHHHYGAGTCVL*LNQGVTDCFKIECW
Trigger: CCAACATTCAATCTTAAAGCAATCTGTGACACCCTGATTCAACAAAAGAACACAGGTCCCAGCCCCGTAGTGGTGGTGCACGCCTTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp AAGGACAGGCTCCAGTCTGATATAGCAAGGGCAGGTAGCACTGGAGAAAATCAACTGGATAGAGATTCATaGACAAGCCAGAAGACAGTG +
Preference number: 2 (lower is better)
Translates to: KDRLQSDIARAGSTGENQLDRDS*TSQKTV
Trigger: CACTGTCTTCTGGCTTGTTCATGAATCTCTATCCAG...TTGATTTTCTCCAGTGCTACCTGCCCTTGCTATATCAGACTGGAGCCTGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp AAGGACAGGCTCCAGTCTGATATAGCAAGGGCAGGTAGCACTGGAGAAAATCAAAATGTGGAAGAACCTTaGATATTTGGGCAGAGGGGA +
Preference number: 2 (lower is better)
Translates to: KDRLQSDIARAGSTGENQNVEEP*IFGQRG
Trigger: TCCCCTCTGCCCAAATATTCAAGGTTCTTCCACATT...TTGATTTTCTCCAGTGCTACCTGCCCTTGCTATATCAGACTGGAGCCTGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp AACACTTGGGTACCAGATCTCTCCTTCCAAGTAGCCACCAGTAGCTCTATGGCAGGAGTATCCTTTGAATaGACCCTGTTTAGGAACAAG +
Preference number: 2 (lower is better)
Translates to: NTWVPDLSFQVATSSSMAGVSFE*TLFRNK
Trigger: CTTGTTCCTAAACAGGGTTCATTCAAAGGATACTCC...TGCCATAGAGCTACTGGTGGCTACTTGGAAGGAGAGATCTGGTACCCAAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp ATTCCCCTTAGACTGTTGCATAAAACCTTCTCAGGATCAAGGGCCTTTCCTTTCGGGCCTCTTCTGACATaGTTGTCTTTCCTTTTGGGG +
Preference number: 2 (lower is better)
Translates to: IPLRLLHKTFSGSRAFPFGPLLT*LSFLLG
Trigger: CCCCAAAAGGAAAGACAACCATGTCAGAAGAGGCCC...GAAAGGAAAGGCCCTTGATCCTGAGAAGGTTTTATGCAACAGTCTAAGGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 90 bp GAAGGGGGAACAAAGTACACATGGCAGGAGTTAAAGAGACAAAGTTaGAAGCAGAGACTGAAGGAACAATCATCCAGAAACTGCCCGACT +
Preference number: 2 (lower is better)
Translates to: EGGTKYTWQELKRQS*KQRLKEQSSRNCPT
Trigger: AGTCGGGCAGTTTCTGGATGATTGTTCCTTCAGTCTCTGCTTCAAACTTTGTCTCTTTAACTCCTGCCATGTGTACTTTGTTCCCCCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 90 bp CTGGTACAACCGCTCTGGAAATCAGTTTGGCGATTCCTCAGAAAATaGGGCAAAGTTTTACTGAAAGATCCAGAAATAGCACTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: LVQPLWKSVWRFLRK*GKVLLKDPEIALLG
Trigger: GCCCAGGAGTGCTATTTCTGGATCTTTCAGTAAAACTTTGCCCAATTTTCTGAGGAATCGCCAAACTGATTTCCAGAGCGGTTGTACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 90 bp TTGCTGGTGGGATTGCAAGCTGGTACAACCGCTCTGGAAATCAGTTaGGCGATTCCTCAGAAAATTGGGCAAAGTTTTACTGAAAGATCC +
Preference number: 2 (lower is better)
Translates to: LLVGLQAGTTALEIS*AIPQKIGQSFTERS
Trigger: GGATCTTTCAGTAAAACTTTGCCCAATTTTCTGAGGAATCGCCAAACTGATTTCCAGAGCGGTTGTACCAGCTTGCAATCCCACCAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp CTTTGTCAGCAGACCTGGGATTCTAGCTCTATCCTGAGTCTCAGTGGTCAGAGTCAAAGTTTTTATTCATaGGAACTGAGGTCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: LCQQTWDSSSILSLSGQSQSFYS*ELRSGS
Trigger: TGACCCAGACCTCAGTTCTCATGAATAAAAACTTTG...ACTCTGACCACTGAGACTCAGGATAGAGCTAGAATCCCAGGTCTGCTGACAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp CTTTGTCAGCAGACCTGGGATTCTAGCTCTATCCTGAGTCTCAGTGGTCAGAGTGCCAGTCTTCAGATGTaGCAAGTTAATTACTTTGAG +
Preference number: 2 (lower is better)
Translates to: LCQQTWDSSSILSLSGQSASLQM*QVNYFE
Trigger: CTCAAAGTAATTAACTTGTCACATCTGAAGACTGGC...ACTCTGACCACTGAGACTCAGGATAGAGCTAGAATCCCAGGTCTGCTGACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp ATTCCCCTTAGACTGTTGCATAAAACCTTCTCAGGATCAAGGGCCTTTCCTTTCGTGTCTGACACTGCTTaGTTGACAGATGCCAGATTC +
Preference number: 2 (lower is better)
Translates to: IPLRLLHKTFSGSRAFPFVSDTA*LTDARF
Trigger: GAATCTGGCATCTGTCAATCAAGCAGTGTCAGACAC...GAAAGGAAAGGCCCTTGATCCTGAGAAGGTTTTATGCAACAGTCTAAGGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp TTTCAGGTTCACAGGATATCAGAATCACAGGATCACAGAGACAGGTGCACTCTGGAAGGTCTCAGAAGATaGAAAGATCTCCCATGCTCA +
Preference number: 2 (lower is better)
Translates to: FQVHRISESQDHRDRCTLEGLRR*KDLPCS
Trigger: TGAGCATGGGAGATCTTTCCATCTTCTGAGACCTTC...CAGAGTGCACCTGTCTCTGTGATCCTGTGATTCTGATATCCTGTGAACCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp ATTCCCCTTAGACTGTTGCATAAAACCTTCTCAGGATCAAGGGCCTTTCCTTTCAGAAAGTGCTTCCTCTaGGCCATCCCAGATAGAATG +
Preference number: 2 (lower is better)
Translates to: IPLRLLHKTFSGSRAFPFRKCFL*AIPDRM
Trigger: CATTCTATCTGGGATGGCCCAGAGGAAGCACTTTCT...GAAAGGAAAGGCCCTTGATCCTGAGAAGGTTTTATGCAACAGTCTAAGGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp ATTCCCCTTAGACTGTTGCATAAAACCTTCTCAGGATCAAGGGCCTTTCCTTTCGTTTTCTTTGGTTGGTaGTTTAGTCCCAGGGAGCTC +
Preference number: 2 (lower is better)
Translates to: IPLRLLHKTFSGSRAFPFVFFGW*FSPREL
Trigger: GAGCTCCCTGGGACTAAACCACCAACCAAAGAAAAC...GAAAGGAAAGGCCCTTGATCCTGAGAAGGTTTTATGCAACAGTCTAAGGGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp CTTTGTCAGCAGACCTGGGATTCTAGCTCTATCCTGAGTCTCAGTGGTCAGAGTTCTTATCTCAGAATATaGACATGGTTCAGCACTGTC +
Preference number: 2 (lower is better)
Translates to: LCQQTWDSSSILSLSGQSSYLRI*TWFSTV
Trigger: GACAGTGCTGAACCATGTCCATATTCTGAGATAAGA...ACTCTGACCACTGAGACTCAGGATAGAGCTAGAATCCCAGGTCTGCTGACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 90 bp ACTGGATCTCTCCATCTCCAACTCAAGGAGGTTTGGGAGTATCCTTaGAATGAACCCTGTTTAGGAACAAGTTGTCAGTACATCTGTCCT +
Preference number: 2 (lower is better)
Translates to: TGSLHLQLKEVWEYP*NEPCLGTSCQYICP
Trigger: AGGACAGATGTACTGACAACTTGTTCCTAAACAGGGTTCATTCAAAGGATACTCCCAAACCTCCTTGAGTTGGAGATGGAGAGATCCAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 90 bp GTGGAGCATGTGCCCTTATTACCATTTGGAACATATTCTGGATATTaGCCCAGGAGAGGTATTGCTGGATCATTCGGTAGTACTATGTCC +
Preference number: 2 (lower is better)
Translates to: VEHVPLLPFGTYSGY*PRRGIAGSFGSTMS
Trigger: GGACATAGTACTACCGAATGATCCAGCAATACCTCTCCTGGGCAAATATCCAGAATATGTTCCAAATGGTAATAAGGGCACATGCTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGAGACCAAAAACAAGGGTaGCAGCAGATGCTGGCGAGG +
Preference number: 2 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRDQKQG*QQMLAR
Trigger: CCTCGCCAGCATCTGCTGTCACCCTTGTTTTTGGTC...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp AAGGACAGGCTCCAGTCTGATATAGCAAGGGCAGGTAGCACTGGAGAAAATCAAGATCTCCCATGCTCATaGATTGGCAGGATTAATATA +
Preference number: 2 (lower is better)
Translates to: KDRLQSDIARAGSTGENQDLPCS*IGRINI
Trigger: TATATTAATCCTGCCAATTCATGAGCATGGGAGATC...TTGATTTTCTCCAGTGCTACCTGCCCTTGCTATATCAGACTGGAGCCTGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp ATCAAACAGCATGTGTCTTCAACTGGAGCAGCTATAATGAGATCATATTTGGGAACCAAAGTGAACATATaGAGGGACCCATGGCCCCAG +
Preference number: 2 (lower is better)
Translates to: IKQHVSSTGAAIMRSYLGTKVNI*RDPWPQ
Trigger: CTGGGGCCATGGGTCCCTTCATATGTTCACTTTGGT...TCCCAAATATGATCTCATTATAGCTGCTCCAGTTGAAGACACATGCTGTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR GCA 90 bp TGCACCATTTGCGTGGAAAATTGCTTCCCAGCCTTTCACTCTGAGGTAGTGTCTTCAACAAATGTTTGCTaGCTCAAATGGCCTTTAGCA +
Preference number: 2 (lower is better)
Translates to: CTICVENCFPAFHSEVVSSTNVC*LKWPLA
Trigger: TGCTAAAGGCCATTTGAGGCAGCAAACATTTGTTGA...AGACACTACCTCAGAGTGAAAGGCTGGGAAGCAATTTTCCACGCAAATGGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp AAGGACAGGCTCCAGTCTGATATAGCAAGGGCAGGTAGCACTGGAGAAAATCAAACTCAAACAAATCAGTaGCCTTTCTATACCCAAAGG +
Preference number: 2 (lower is better)
Translates to: KDRLQSDIARAGSTGENQTQTNQ*PFYTQR
Trigger: CCTTTGGGTATAGAAAGGCCACTGATTTGTTTGAGT...TTGATTTTCTCCAGTGCTACCTGCCCTTGCTATATCAGACTGGAGCCTGTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp ATTCCCCTTAGACTGTTGCATAAAACCTTCTCAGGATCAAGGGCCTTTCCTTTCTGTGTTTTCTTTGGTTaGTGGTTTAGTCCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: IPLRLLHKTFSGSRAFPFCVFFG*WFSPRE
Trigger: CTCCCTGGGACTAAACCACCAACCAAAGAAAACACA...GAAAGGAAAGGCCCTTGATCCTGAGAAGGTTTTATGCAACAGTCTAAGGGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 90 bp AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATAGATCAATaGAGCCTATCACTAGATGGGTTTTGTGCAGAATTCTATCAGACC +
Preference number: 2 (lower is better)
Translates to: REREREREREREIDQ*SLSLDGFCAEFYQT
Trigger: GGTCTGATAGAATTCTGCACAAAACCCATCTAGTGATAGGCTCAATTGATCTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp AAGGACAGGCTCCAGTCTGATATAGCAAGGGCAGGTAGCACTGGAGAAAATCAAACTGGAAAACCTGGATaGAATGGACAATTTTCTAGA +
Preference number: 2 (lower is better)
Translates to: KDRLQSDIARAGSTGENQTGKPG*NGQFSR
Trigger: TCTAGAAAATTGTCCATTTCATCCAGGTTTTCCAGT...TTGATTTTCTCCAGTGCTACCTGCCCTTGCTATATCAGACTGGAGCCTGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp ATTCCCCTTAGACTGTTGCATAAAACCTTCTCAGGATCAAGGGCCTTTCCTTTCTTGGGGTATGTTGCTTaGGAAAATGGTTTATGGCCT +
Preference number: 2 (lower is better)
Translates to: IPLRLLHKTFSGSRAFPFLGYVA*ENGLWP
Trigger: AGGCCATAAACCATTTTCTCAAGCAACATACCCCAA...GAAAGGAAAGGCCCTTGATCCTGAGAAGGTTTTATGCAACAGTCTAAGGGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp GACAATGTATTTGCTTGCTGCAGAAGTAACTCATTGAGTGAATGGGCTACAGCAAATGGTGTGAAAAGCTaGGGGTACCATGAAAGGAGT +
Preference number: 2 (lower is better)
Translates to: DNVFACCRSNSLSEWATANGVKS*GYHERS
Trigger: ACTCCTTTCATGGTACCCTCAGCTTTTCACACCATT...TGCTGTAGCCCATTCACTCAATGAGTTACTTCTGCAGCAAGCAAATACATTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR-3UTR GCA 90 bp TTTCTACCCATAAGATTTCCAGGTATGCATCTTTGCCAGTGTTTGGGGGAGGGGATGGCAATTCATTCCTaGAAAAGACAGTTTCCCTTA +
Preference number: 2 (lower is better)
Translates to: FLPIRFPGMHLCQCLGEGMAIHS*KRQFPL
Trigger: TAAGGGAAACTGTCTTTTGCAGGAATGAATTGCCAT...CCCCTCCCCCAAACACTGGCAAAGATGCATACCTGGAAATCTTATGGGTAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR GCA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGAGGCAAGTGCTCCTCTTaGAGGGAAGCTGCACAGATA +
Preference number: 2 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRGKCSS*REAAQI
Trigger: TATCTGTGCAGCTTCCCTGCAAGAGGAGCACTTGCC...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp TTCTTCTCAGAACCTCCTCATGGTACCTTCTTCATAACTGACCATATTATTGGTATGCTGGCGAGGATGTaGAGAAAGAGGAACACTCCT +
Preference number: 2 (lower is better)
Translates to: FFSEPPHGTFFITDHIIGMLARM*RKRNTP
Trigger: AGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCAT...ACCAATAATATGGTCAGTTATGAAGAAGGTACCATGAGGAGGTTCTGAGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp TGCACCATTTGCGTGGAAAATTGCTTCCCAGCCTTTCACTCTGAGGTAGTGTCTATAAAACAAACTGTGTaGTACAGGTACAGTGACAGA +
Preference number: 2 (lower is better)
Translates to: CTICVENCFPAFHSEVVSIKQTV*YRYSDR
Trigger: TCTGTCACTGTACCTGTACCACACAGTTTGTTTTAT...AGACACTACCTCAGAGTGAAAGGCTGGGAAGCAATTTTCCACGCAAATGGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTAAGCCTCCTCACCTCTaGAGTTCTGGAGATGTACAG +
Preference number: 2 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACKPPHL*SSGDVQ
Trigger: CTGTACATCTCCAGAACTCCAGAGGTGAGGAGGCTT...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR-3UTR TCA 90 bp CCCTACCTCAGAGTCAAAGGTTGCAAACAATTTTTCAAGCAAATGGTCACAAGATTTCCCAAGGTAGGATaGTATCCACAATGTGTTCCC +
Preference number: 2 (lower is better)
Translates to: PYLRVKGCKQFFKQMVTRFPKVG*YPQCVP
Trigger: GGGAACACATTGTGGATATCATCCTACCTTGGGAAA...TCTTGTGACCATTTGCTTGAAAAATTGTTTGCAACCTTTGACTCTGAGGTAGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp AGGCTACTATACCCAGCAAACCTCCCAATTACCATAGACAGAGAAAACAAGATAGTGGTACAGGTACAGTaGCAGACACAAAGATCAATG +
Preference number: 2 (lower is better)
Translates to: RLLYPANLPITIDRENKIVVQVQ*QTQRSM
Trigger: CATTGATCTTTGTGTCTGTCACTGTACCTGTACCAC...TATCTTGTTTTCTCTGTCTATGGTAATTGGGAGGTTTGCTGGGTATAGTAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp TTTCAGGTTCACAGGATATCAGAATCACAGGATCACAGAGACAGGTGCACTCTGTCCCCCTTTTTGCTATaGGATACTAAATCTGAGATT +
Preference number: 2 (lower is better)
Translates to: FQVHRISESQDHRDRCTLSPFLL*DTKSEI
Trigger: AATCTCAGATTTAGTATCTCATAGCAAAAAGGGGGA...CAGAGTGCACCTGTCTCTGTGATCCTGTGATTCTGATATCCTGTGAACCTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR GCA 90 bp GCTGTGCTAAGATTAAAACACATATCTCTGAGTGCCTCCAAAATGAAACATGGAGACAAGACATTTTGCTaGACACAGGAAACCCACCTC +
Preference number: 2 (lower is better)
Translates to: AVLRLKHISLSASKMKHGDKTFC*TQETHL
Trigger: GAGGTGGGTTTCCTGTGTGCAGCAAAATGTCTTGTC...TCCATGTTTCATTTTGGAGGCACTCAGAGATATGTGTTTTAATCTTAGCACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp TCTCTGGTTGGAGATGTTCCTCCTGTGATTCTGTTAGCCTTTGTCAGCAGACCTTTAGAAGCAGGAATGTaGGAAATGCTGATTAAATTC +
Preference number: 2 (lower is better)
Translates to: SLVGDVPPVILLAFVSRPLEAGM*EMLIKF
Trigger: GAATTTAATCAGCATTTCCCACATTCCTGCTTCTAA...AGGTCTGCTGACAAAGGCTAACAGAATCACAGGAGGAACATCTCCAACCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp GACCTATCCCAGAATCGGGATCTATTCTGTGGAATAGAAGCAATCTGTCAGCTTAGAACCTTGAATATTTaGGCAGAGGGGAAAGATTCA +
Preference number: 2 (lower is better)
Translates to: DLSQNRDLFCGIEAICQLRTLNI*AEGKDS
Trigger: TGAATCTTTCCCCTCTGCCCAAATATTCAAGGTTCT...AAGCTGACAGATTGCTTCTATTCCACAGAATAGATCCCGATTCTGGGATAGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 90 bp TGGAATCTTCTGCACCTGAGAATATCTTCCATCTCTTGTATTTTGTaGCTGATGCTCGCATCTATGGTTCCAGATTTCTTTCCTAGGGTT +
Preference number: 2 (lower is better)
Translates to: WNLLHLRISSISCIL*LMLASMVPDFFPRV
Trigger: AACCCTAGGAAAGAAATCTGGAACCATAGATGCGAGCATCAGCAACAAAATACAAGAGATGGAAGATATTCTCAGGTGCAGAAGATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 90 bp CTATGGAATCTTCTGCACCTGAGAATATCTTCCATCTCTTGTATTTaGTTGCTGATGCTCGCATCTATGGTTCCAGATTTCTTTCCTAGG +
Preference number: 2 (lower is better)
Translates to: LWNLLHLRISSISCI*LLMLASMVPDFFPR
Trigger: CCTAGGAAAGAAATCTGGAACCATAGATGCGAGCATCAGCAACAAAATACAAGAGATGGAAGATATTCTCAGGTGCAGAAGATTCCATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp TTTGCATTTCTTCTCTCAATTCAGAGGCAAATTGAAGTCCTAGACCGTCATCTGTTCTTGAGGATAAACTaGCTTTACTCCCATCAGCCA +
Preference number: 2 (lower is better)
Translates to: FAFLLSIQRQIEVLDRHLFLRIN*LYSHQP
Trigger: TGGCTGATGGGAGTAAAGTCAGTTTATCCTCAAGAA...CAGATGACGGTCTAGGACTTCAATTTGCCTCTGAATTGAGAGAAGAAATGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR-3UTR GCA 90 bp ATCAAACAGCATGTGTCTTCAACTGGAGCAGCTATAATGAGATCATATTTGGGACTATATTTTCTTCTCTaGCCATGGTGGAGGGCAGTT +
Preference number: 2 (lower is better)
Translates to: IKQHVSSTGAAIMRSYLGLYFLL*PWWRAV
Trigger: AACTGCCCTCCACCATGGGCAGAGAAGAAAATATAG...TCCCAAATATGATCTCATTATAGCTGCTCCAGTTGAAGACACATGCTGTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR GCA 90 bp TGGGCACTTGAAACAATAATCCATGTCTGTCATATTGGAAATCTCATTCTCTGGAGGGAAGAGAGCACCTaGAAAGAATCAAACTCCAGT +
Preference number: 2 (lower is better)
Translates to: WALETIIHVCHIGNLILWREEST*KESNSS
Trigger: ACTGGAGTTTGATTCTTTGCAGGTGCTCTCTTCCCT...CCAGAGAATGAGATTTCCAATATGACAGACATGGATTATTGTTTCAAGTGCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR-3UTR CCA 90 bp ATTAAAACACATATCTCTGAGTGCCTCCAAAATGAAACATGGAGAGAGAGCATACTAGTCAGTCATCAATaGGAGGACAGGACCTGTGAA +
Preference number: 2 (lower is better)
Translates to: IKTHISECLQNETWRESILVSHQ*EDRTCE
Trigger: TTCACAGGTCCTGTCCTCCCATTGATGACTGACTAG...TATGCTCTCTCTCCATGTTTCATTTTGGAGGCACTCAGAGATATGTGTTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp TTGATATGTAACAGGAACCAACATTTTGCTGCATATTGGAAACATACTTCAGTGCTCCTCCATTGCTGGTaGGATTGCAAGCTGGTACAA +
Preference number: 2 (lower is better)
Translates to: LICNRNQHFAAYWKHTSVLLHCW*DCKLVQ
Trigger: TTGTACCAGCTTGCAATCCCACCAGCAATGGAGGAG...CACTGAAGTATGTTTCCAATATGCAGCAAAATGTTGGTTCCTGTTACATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp ATGTTGGGTCCTGTTGGTGTAGCCAGTCTATTAGTCTATGTCTTTTTATTAGGGAAAGCCAGAAGATCCTaGGCAGATTTCATACAGATC +
Preference number: 2 (lower is better)
Translates to: MLGPVGVASLLVYVFLLGKARRS*ADFIQI
Trigger: GATCTGTATGAAATCTGCCCAGGATCTTCTGGCTTT...CCCTAATAAAAAGACATAGACTAATAGACTGGCTACACCAACAGGACCCAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGAATCCCTTCAGCTCCTTaGGTACTTTCTAGCTCCACT +
Preference number: 2 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRIPSAP*VLSSST
Trigger: AGTGGAGCTAGAAAGTACCCAAGGAGCTGAAGGGAT...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGATGCTACATATGCAGTTaGAGCCATGAGTCCCACCAT +
Preference number: 2 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRCYICS*SHESHH
Trigger: ATGGTGGGACTCATGGCTCCAACTGCATATGTAGCA...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 90 bp GTCTCAGCTCCAAACTTTGTCTCTGTAATTCCTTCCATGGGTGTTTaGTTCCCTAATCTTAAAAGGAAGGAAGTATGCATACATTGGTCT +
Preference number: 2 (lower is better)
Translates to: VSAPNFVSVIPSMGV*FPNLKRKEVCIHWS
Trigger: AGACCAATGTATGCATACTTCCTTCCTTTTAAGATTAGGGAACAAAACACCCATGGAAGGAATTACAGAGACAAAGTTTGGAGCTGAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp TTCTTCTCAGAACCTCCTCATGGTACCTTCTTCATAACTGACCATATTATTGGTAGACCACACATAATCTaGTACCTAAACCACCCAAAG +
Preference number: 2 (lower is better)
Translates to: FFSEPPHGTFFITDHIIGRPHII*YLNHPK
Trigger: CTTTGGGTGGTTTAGGTATCAGATTATGTGTGGTCT...ACCAATAATATGGTCAGTTATGAAGAAGGTACCATGAGGAGGTTCTGAGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp TTCTTCTCAGAACCTCCTCATGGTACCTTCTTCATAACTGACCATATTATTGGTCATACCTCCCTTCATTaGATACAGCAAAAACACACC +
Preference number: 2 (lower is better)
Translates to: FFSEPPHGTFFITDHIIGHTSLH*IQQKHT
Trigger: GGTGTGTTTTTGCTGTATTCAATGAAGGGAGGTATG...ACCAATAATATGGTCAGTTATGAAGAAGGTACCATGAGGAGGTTCTGAGAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp ATCAAACAGCATGTGTCTTCAACTGGAGCAGCTATAATGAGATCATATTTGGGATCCAATCAGATATATTaGGGGCAGGATGCATTTGAG +
Preference number: 2 (lower is better)
Translates to: IKQHVSSTGAAIMRSYLGSNQIY*GQDAFE
Trigger: CTCAAATGCATCCTGCCCTCAATATATCTGATTGGA...TCCCAAATATGATCTCATTATAGCTGCTCCAGTTGAAGACACATGCTGTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGAATATCCTTGAGCCTGTaGAGAGCTTTGTACATCTGG +
Preference number: 2 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRISLSL*RALYIW
Trigger: CCAGATGTACAAAGCTCTTCACAGGCTCAAGGATAT...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp GACAATGTATTTGCTTGCTGCAGAAGTAACTCATTGAGTGAATGGGCTACAGCACAGCAACATTTTTCTTaGACATGTCTTGAGACTCTT +
Preference number: 2 (lower is better)
Translates to: DNVFACCRSNSLSEWATAQQHFS*TCLETL
Trigger: AAGAGTCTCAAGACATGTTCAAGAAAAATGTTGCTG...TGCTGTAGCCCATTCACTCAATGAGTTACTTCTGCAGCAAGCAAATACATTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR-3UTR GCA 90 bp ATCAAACAGCATGTGTCTTCAACTGGAGCAGCTATAATGAGATCATATTTGGGATTGAACTCAGAAATCTaGCTGCATCTGCTTCACAAG +
Preference number: 2 (lower is better)
Translates to: IKQHVSSTGAAIMRSYLGLNSEI*LHLLHK
Trigger: CTTGTGAAGCAGATGCAGGCAGATTTCTGAGTTCAA...TCCCAAATATGATCTCATTATAGCTGCTCCAGTTGAAGACACATGCTGTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp GACCTATCCCAGAATCGGGATCTATTCTGTGGAATAGAAGCAATCTGTCAGCTTGCAGCATATAAATGCTaGATAGAGATTCATGAACAA +
Preference number: 2 (lower is better)
Translates to: DLSQNRDLFCGIEAICQLAAYKC*IEIHEQ
Trigger: TTGTTCATGAATCTCTATCCAGCATTTATATGCTGC...AAGCTGACAGATTGCTTCTATTCCACAGAATAGATCCCGATTCTGGGATAGGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp CATACACAGCATTGTATAGGTTATAACTTGTGTCACTCATGGACATTTCAAAGTTCACCTCTGGAGTTCTaGAGATGTACAGAAGTGGTC +
Preference number: 2 (lower is better)
Translates to: HTQHCIGYNLCHSWTFQSSPLEF*RCTEVV
Trigger: GACCACTTCTGTACATCTCCAGAACTCCAGAGGTGA...ACTTTGAAATGTCCATGAGTGACACAAGTTATAACCTATACAATGCTGTGTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR-3UTR TCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCAAAGTTTTTATTCATaGGAACTGAGGTCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: GVIICCFLEETLNMLELYQSFYS*ELRSGS
Trigger: TGACCCAGACCTCAGTTCTCATGAATAAAAACTTTG...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
3UTR-3UTR TCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCCAAAGTTTTTATTCATaGGAACTGAGGTCTGGGTCA +
Preference number: 2 (lower is better)
Translates to: NYLLFSRGNIEHARALPLQSFYS*ELRSGS
Trigger: TGACCCAGACCTCAGTTCTCATGAATAAAAACTTTG...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
3UTR-3UTR TCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTAGGATATTTAAGGCATaGTTTGGAACTGGGTCTGTT +
Preference number: 2 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACRIFKA*FGTGSV
Trigger: AACAGACCCAGTTCCAAATCATGCCTTAAATATCCT...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
3UTR-3UTR TCA 90 bp GCTGTGCTAAGATTAAAACACATATCTCTGAGTGCCTCCAAAATGAAACATGGAAGGATATTTAAGGCATaGTTTGGAACTGGGTCTGTT +
Preference number: 2 (lower is better)
Translates to: AVLRLKHISLSASKMKHGRIFKA*FGTGSV
Trigger: AACAGACCCAGTTCCAAATCATGCCTTAAATATCCT...TCCATGTTTCATTTTGGAGGCACTCAGAGATATGTGTTTTAATCTTAGCACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp ATGTTGGGTCCTGTTGGTGTAGCCAGTCTATTAGTCTATGTCTTTTTATTAGGGTCAATGGAACAGAATTaGAGACCCAGAAATGAATCT +
Preference number: 2 (lower is better)
Translates to: MLGPVGVASLLVYVFLLGSMEQN*RPRNES
Trigger: AGATTCATTTCTGGGTCTTCAATTCTGTTCCATTGA...CCCTAATAAAAAGACATAGACTAATAGACTGGCTACACCAACAGGACCCAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR GCA 90 bp ATCAAACAGCATGTGTCTTCAACTGGAGCAGCTATAATGAGATCATATTTGGGATCATTTCTCATTCACTaGTCTAGCATCTCACTATGC +
Preference number: 2 (lower is better)
Translates to: IKQHVSSTGAAIMRSYLGSFLIH*SSISLC
Trigger: GCATAGTGAGATGCTAGAGCAGTGAATGAGAAATGA...TCCCAAATATGATCTCATTATAGCTGCTCCAGTTGAAGACACATGCTGTTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR GCA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGAAATCATGCTGGCATATaGCATAGTGTCTGCATTTGG +
Preference number: 2 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRNHAGI*HSVCIW
Trigger: CCAAATGCAGACACTATGGCATATGCCAGCATGATT...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGAGGTTTTAGTGAGATGTaGAAAATCTGGCATTGGCCT +
Preference number: 2 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRGFSEM*KIWHWP
Trigger: AGGCCAATGCCAGATTTTCCACATCTCACTAAAACC...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGAGCATGTGTCTTCAACTaGAGCAGCTATAATGAGATC +
Preference number: 2 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRACVFN*SSYNEI
Trigger: GATCTCATTATAGCTGCTCCAGTTGAAGACACATGC...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp TTCTTCTCAGAACCTCCTCATGGTACCTTCTTCATAACTGACCATATTATTGGTTGGCTAAAACAGTCATaGGTGATAACATATCTTCTG +
Preference number: 2 (lower is better)
Translates to: FFSEPPHGTFFITDHIIGWLKQS*VITYLL
Trigger: CAGAAGATATGTTATCACTCATGACTGTTTTAGCCA...ACCAATAATATGGTCAGTTATGAAGAAGGTACCATGAGGAGGTTCTGAGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR TCA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGACTTCCAGTAATCTCTTaGGAAATCATCTTGGAGTCT +
Preference number: 2 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRLPVIS*EIILES
Trigger: AGACTCCAAGATGATTTCTCAAGAGATTACTGGAAG...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR GCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACAGGTTGATTTATGTGTaGAATCCATCAGTGTATCCA +
Preference number: 2 (lower is better)
Translates to: GVIICCFLEETLNMLELYRLIYV*NPSVYP
Trigger: TGGATACACTGATGGATTGCACACATAAATCAACCT...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR-3UTR CCA 90 bp GCTGTGCTAAGATTAAAACACATATCTCTGAGTGCCTCCAAAATGAAACATGGAAGACACAAAGATCAATaGAACAGAATTGAAGACCCA +
Preference number: 2 (lower is better)
Translates to: AVLRLKHISLSASKMKHGRHKDQ*NRIEDP
Trigger: TGGGTCTTCAATTCTGTTCCATTGATCTTTGTGTCT...TCCATGTTTCATTTTGGAGGCACTCAGAGATATGTGTTTTAATCTTAGCACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 90 bp TTATTTAATTGTTGGGCCCTTGTAGAATACCTTTGGTTCAGTGGATaGACTTATCTAAGAGCACTTCTTCAGCATGTACTTGTCTTGATT +
Preference number: 2 (lower is better)
Translates to: LFNCWALVEYLWFSG*TYLRALLQHVLVLI
Trigger: AATCAAGACAAGTACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACAAGGGCCCAACAATTAAATAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
3UTR-3UTR GCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTTTCGGGGTAATTATTTaGTGTTTTCTAGAGGAAACA +
Preference number: 2 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACFGVII*CFLEET
Trigger: TGTTTCCTCTAGAAAACAGCAAATAATTACCCCGAA...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
3UTR-3UTR GCA 90 bp GTAATCTTCTTCTCAGAACCTCCTCATGGTACCTTCTTCATAACTGACCATATTTTTTCAACCCAGAGATaGAAGAATGGTTCAATATAC +
Preference number: 2 (lower is better)
Translates to: VIFFSEPPHGTFFITDHIFSTQR*KNGSIY
Trigger: GTATATTGAACCATTCTTGCATCTCTGGGTTGAAAA...AATATGGTCAGTTATGAAGAAGGTACCATGAGGAGGTTCTGAGAAGAAGATTAC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR GCA 90 bp TGGGCACTTGAAACAATAATCCATGTCTGTCATATTGGAAATCTCATTCTCTGGAATGTATTTGCTTGCTaGAGAAGTAACTCATTGAGT +
Preference number: 2 (lower is better)
Translates to: WALETIIHVCHIGNLILWNVFAC*RSNSLS
Trigger: ACTCAATGAGTTACTTCTGCAGCAAGCAAATACATT...CCAGAGAATGAGATTTCCAATATGACAGACATGGATTATTGTTTCAAGTGCCCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR-3UTR CCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCTTAGAAGCAGGAATGTaGGAAATGCTGATTAAATTC +
Preference number: 2 (lower is better)
Translates to: NYLLFSRGNIEHARALPLLEAGM*EMLIKF
Trigger: GAATTTAATCAGCATTTCCCACATTCCTGCTTCTAA...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
3UTR-3UTR CCA 90 bp AACTCCAGTCCTTTCCCAACATTATTTGACAATGTATTTGCTTGCTGCAGAAGTTTAGAAGCAGGAATGTaGGAAATGCTGATTAAATTC +
Preference number: 2 (lower is better)
Translates to: NSSPFPTLFDNVFACCRSLEAGM*EMLIKF
Trigger: GAATTTAATCAGCATTTCCCACATTCCTGCTTCTAA...ACTTCTGCAGCAAGCAAATACATTGTCAAATAATGTTGGGAAAGGACTGGAGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR-3UTR CCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTTTAGAAGCAGGAATGTaGGAAATGCTGATTAAATTC +
Preference number: 2 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACLEAGM*EMLIKF
Trigger: GAATTTAATCAGCATTTCCCACATTCCTGCTTCTAA...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
3UTR-3UTR CCA 90 bp GATTTTAAATCCAAATCTTGCTTTTCACGTGTGATAGGGTATTCAGGACTGGCTGCTACCAAACTAATCTaGGTTCTCTTGAAAATTAGT +
Preference number: 2 (lower is better)
Translates to: DFKSKSCFSRVIGYSGLAATKLI*VLLKIS
Trigger: ACTAATTTTCAAGAGAACCCAGATTAGTTTGGTAGC...AGCCAGTCCTGAATACCCTATCACACGTGAAAAGCAAGATTTGGATTTAAAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGACTCAATTACCAGATATaGAGAAACCAAGGTATTGCA +
Preference number: 2 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRLNYQI*RNQGIA
Trigger: TGCAATACCTTGGTTTCTCCATATCTGGTAATTGAG...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 90 bp TACTCCGCAAAACTCTCAATTACCAGATATGGAGAAACCAAGGTATaGCATGTCAAAACCCAATTTACACAATATCTTTCCACAAATCTA +
Preference number: 2 (lower is better)
Translates to: YSAKLSITRYGETKV*HVKTQFTQYLSTNL
Trigger: TAGATTTGTGGAAAGATATTGTGTAAATTGGGTTTTGACATGCAATACCTTGGTTTCTCCATATCTGGTAATTGAGAGTTTTGCGGAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 90 bp CAAGTAACATATAAAGGCAGACCTATTAGGATTACATCAGACTTTTaGCCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATA +
Preference number: 2 (lower is better)
Translates to: QVTYKGRPIRITSDF*PESMKSRRSWEEII
Trigger: TATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGGCAAAAAGTCTGATGTAATCCTAATAGGTCTGCCTTTATATGTTACTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 90 bp AACATCTGTGGCCCAGTCTACCAATTCCTCATACATAAGCAATTCTaGAGGATGTGTAAAGTATTTGAAAAACTTTCCTATTTTCACCTT +
Preference number: 2 (lower is better)
Translates to: NICGPVYQFLIHKQF*RMCKVFEKLSYFHL
Trigger: AAGGTGAAAATAGGAAAGTTTTTCAAATACTTTACACATCCTCAAGAATTGCTTATGTATGAGGAATTGGTAGACTGGGCCACAGATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR-3UTR GCA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGATGTGCAGCATATAAATaGTGGATAGAGATTCATGAA +
Preference number: 2 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRCAAYK*WIEIHE
Trigger: TTCATGAATCTCTATCCAGCATTTATATGCTGCACA...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CCA 90 bp CATACACAGCATTGTATAGGTTATAACTTGTGTCACTCATGGACATTTCAAAGTCTTGTAGAATACCTTTaGTTCAGTGGATTGACTTAT +
Preference number: 2 (lower is better)
Translates to: HTQHCIGYNLCHSWTFQSLVEYL*FSGLTY
Trigger: ATAAGTCAATCCACTGAACCAAAGGTATTCTACAAG...ACTTTGAAATGTCCATGAGTGACACAAGTTATAACCTATACAATGCTGTGTATG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR CCA 72 bp TGGCAGAGCCCTCCAGGGCAGACACCTCTCCTCTTGTaGGATGTCTGGAGCCCCAAATGGGGTCTGTCCCAG +
Preference number: 3 (lower is better)
Translates to: WQSPPGQTPLLL*DVWSPKWGLSQ
Trigger: CTGGGACAGACCCCATTTGGGGCTCCAGACATCCCACAAGAGGAGAGGTGTCTGCCCTGGAGGGCTCTGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp CTATGTCCCTATCTACCTCCCTTGGGCCCAGATCTGTaGCTGCCATGTGCAGAGAAGGGGCATGTGCTAGGG +
Preference number: 3 (lower is better)
Translates to: LCPYLPPLGPDL*LPCAEKGHVLG
Trigger: CCCTAGCACATGCCCCTTCTCTGCACATGGCAGTCACAGATCTGGGCCCAAGGGAGGTAGATAGGGACATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp TGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTaGTGGTGGGATTGCAAGCTGGTACAACCGCTCTGG +
Preference number: 3 (lower is better)
Translates to: WRGCGERGTLLH*WWDCKLVQPLW
Trigger: CCAGAGCGGTTGTACCAGCTTGCAATCCCACCAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR GCA 72 bp TCTACCTCCCTTGGGCCCAGATCTGTGACTGCCATGTaGAGAGAAGGGGCATGTGCTAGGGCAGAGTTTCAA +
Preference number: 3 (lower is better)
Translates to: STSLGPRSVTAM*REGACARAEFQ
Trigger: TTGAAACTCTGCCCTAGCACATGCCCCTTCTCTGCACATGGCAGTCACAGATCTGGGCCCAAGGGAGGTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR GCA 72 bp TCCCAGGGAGCTCTGGAGGTCCTGGTTAGTTCACATTaGTGTTCCTCCTATGGGGCTGCAAATCCCTTCAGC +
Preference number: 3 (lower is better)
Translates to: SQGALEVLVSSH*CSSYGAANPFS
Trigger: GCTGAAGGGATTTGCAGCCCCATAGGAGGAACAGCAATGTGAACTAACCAGGACCTCCAGAGCTCCCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp GACAGGACCTGTGAAGGTTCTATGCCCCAGTATAAGTaGATGCCAGGACCAGGAATGGGAGTACGGGGGTTG +
Preference number: 3 (lower is better)
Translates to: DRTCEGSMPQYK*MPGPGMGVRGL
Trigger: CAACCCCCGTACTCCCATTCCTGGTCCTGGCATTCACTTATACTGGGGCATAGAACCTTCACAGGTCCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR GCA 72 bp GATCCTGTGAAGGTTCCATGCCCCAGTGTAGAGGATTaGCAGGACAGGGAAGTAGGAGTGAGTAGCTTGGTG +
Preference number: 3 (lower is better)
Translates to: DPVKVPCPSVED*QDREVGVSSLV
Trigger: CACCAAGCTACTCACTCCTACTTCCCTGTCCTGGCAATCCTCTACACTGGGGCATGGAACCTTCACAGGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR GCA 72 bp CTAACCCCTACACATAACATTCCCCTCGTTCCCGTTTaGCTCTGTGAGGGTGCTCCTCCACTCACACTCTCA +
Preference number: 3 (lower is better)
Translates to: LTPTHNIPLVPV*LCEGAPPLTLS
Trigger: TGAGAGTGTGAGTGGAGGAGCACCCTCACAGAGGCAAACGGGAACGAGGGGAATGTTATGTGTAGGGGTTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp CAGATGCTATCCCAAAAGTCTCCTATACTCGGCCCCTaGCCTGCTTCCCTACCCACCCACTTCCAATTCTTG +
Preference number: 3 (lower is better)
Translates to: QMLSQKSPILGP*PASLPTHFQFL
Trigger: CAAGAATTGGAAGTGGGTGGGTAGGGAAGCAGGGCAGGGGCCGAGTATAGGAGACTTTTGGGATAGCATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp CCAAAACAGGGACTGTCCCAGAACCCATGTTGCTTCTaGCTGTCCCAGGAGCTGTGTGGCTTTTGTAATCCG +
Preference number: 3 (lower is better)
Translates to: PKQGLSQNPCCF*LSQELCGFCNP
Trigger: CGGATTACAAAAGCCACACAGCTCCTGGGACAGGCAGAAGCAACATGGGTTCTGGGACAGTCCCTGTTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp GAAGACCCAAAACAGGGACTGTCCCAGAACCCATGTTaGTTCTGCCTGTCCCAGGAGCTGTGTGGCTTTTGT +
Preference number: 3 (lower is better)
Translates to: EDPKQGLSQNPC*FCLSQELCGFC
Trigger: ACAAAAGCCACACAGCTCCTGGGACAGGCAGAAGCAACATGGGTTCTGGGACAGTCCCTGTTTTGGGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp GTGGTCAGAGTACTCTCTGCAGGCAAGTGCTCCTCTTaGAGGGAAGCTGCACAGATATCTGGCATTTGGACC +
Preference number: 3 (lower is better)
Translates to: VVRVLSAGKCSS*REAAQISGIWT
Trigger: GGTCCAAATGCCAGATATCTGTGCAGCTTCCCTGCAAGAGGAGCACTTGCCTGCAGAGAGTACTCTGACCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp AGTCCCTCAACTCCCAGAGGAAGCTCCAGTCCCATGTaGACTAACATGCCCAGTATCACAGGATCAGAGGTG +
Preference number: 3 (lower is better)
Translates to: SPSTPRGSSSPM*TNMPSITGSEV
Trigger: CACCTCTGATCCTGTGATACTGGGCATGTTAGTGCACATGGGACTGGAGCTTCCTCTGGGAGTTGAGGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp ATGGCAGATGCCAACAAGAGCTTGCTGGCACGAGACTaGTATAGCTGTCTCCTGAGGGGCTCTGCTATTTCC +
Preference number: 3 (lower is better)
Translates to: MADANKSLLARD*YSCLLRGSAIS
Trigger: GGAAATAGCAGAGCCCCTCAGGAGACAGCTATATCAGTCTCGTGCCAGCAAGCTCTTGTTGGCATCTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR GCA 72 bp TCCTGCTCCCTGGCCCTGGCATTCCCCTTAGACTGTTaGATAAAACCTTCTCAGGATCAAGGGCCTTTCCTT +
Preference number: 3 (lower is better)
Translates to: SCSLALAFPLDC*IKPSQDQGPFL
Trigger: AAGGAAAGGCCCTTGATCCTGAGAAGGTTTTATGCAACAGTCTAAGGGGAATGCCAGGGCCAGGGAGCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp CGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTaGTGGGATTGCAAGCTGGTACAACCGCTCTGGAAA +
Preference number: 3 (lower is better)
Translates to: RGCGERGTLLHC*WDCKLVQPLWK
Trigger: TTTCCAGAGCGGTTGTACCAGCTTGCAATCCCACCAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 72 bp GCTCTTGTTGGCATCCACAATAGTGTCTGGTATTGGTaGTTGTTCATGGGATGGATCCCCAGGTGGGGCAGT +
Preference number: 3 (lower is better)
Translates to: ALVGIHNSVWYW*LFMGWIPRWGS
Trigger: ACTGCCCCACCTGGGGATCCATCCCATGAACAACCACCAATACCAGACACTATTGTGGATGCCAACAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp CAAGCTCTTGTTGGCATCCACAATAGTGTCTGGTATTaGTGGTTGTTCATGGGATGGATCCCCAGGTGGGGC +
Preference number: 3 (lower is better)
Translates to: QALVGIHNSVWY*WLFMGWIPRWG
Trigger: GCCCCACCTGGGGATCCATCCCATGAACAACCACCAATACCAGACACTATTGTGGATGCCAACAAGAGCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp CCTGCCCTGCTTCCCTACCCACCCACTTCCAATTCTTaGCTATGGCATTCCTCTACACTCGGGCATATAAAG +
Preference number: 3 (lower is better)
Translates to: PALLPYPPTSNS*LWHSSTLGHIK
Trigger: CTTTATATGCCCGAGTGTAGAGGAATGCCATAGCCAAGAATTGGAAGTGGGTGGGTAGGGAAGCAGGGCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp CAGGATGTCAGGATCTTGGTGACACCAGGATCTCAGTGTTCCAGAGGCAGCTTGGCACTAATGGATAAGTaGATACTAGCCCAGACGCTC +
Preference number: 3 (lower is better)
Translates to: QDVRILVTPGSQCSRGSLALMDK*ILAQTL
Trigger: GAGCGTCTGGGCTAGTATCAACTTATCCATTAGTGC...CAAGCTGCCTCTGGAACACTGAGATCCTGGTGTCACCAAGATCCTGACATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR GCA 72 bp GGAGAAAGAGGAACACTCCTCCATTGCTGGTGGGATTaGAAGCTGGTACAACCGCTCTGGAAATCAGTTTGG +
Preference number: 3 (lower is better)
Translates to: GERGTLLHCWWD*KLVQPLWKSVW
Trigger: CCAAACTGATTTCCAGAGCGGTTGTACCAGCTTGCAATCCCACCAGCAATGGAGGAGTGTTCCTCTTTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 72 bp GGATGTGGAGAAAGAGGAACACTCCTCCATTGCTGGTaGGATTGCAAGCTGGTACAACCGCTCTGGAAATCA +
Preference number: 3 (lower is better)
Translates to: GCGERGTLLHCW*DCKLVQPLWKS
Trigger: TGATTTCCAGAGCGGTTGTACCAGCTTGCAATCCCACCAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 72 bp CTGGCTAAGACCAAAAACAAGGGTGACAGCAGATGCTaGCGAGGATGTGGAGAAAGAGGAACACTCCTCCAT +
Preference number: 3 (lower is better)
Translates to: LAKTKNKGDSRC*RGCGERGTLLH
Trigger: ATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTGTCACCCTTGTTTTTGGTCTTAGCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 72 bp GCATCCACAATAGTGTCTGGTATTGGTGGTTGTTCATaGGATGGATCCCCAGGTGGGGCAGTCTCTAAATCC +
Preference number: 3 (lower is better)
Translates to: ASTIVSGIGGCS*DGSPGGAVSKS
Trigger: GGATTTAGAGACTGCCCCACCTGGGGATCCATCCCATGAACAACCACCAATACCAGACACTATTGTGGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp CTTTGTCAGCAGACCTGGGATTCTAGCTCTATCCTGAGTCTCAGTGGTCAGAGTAATGGTGGGAGGGATTaGCAATGGTGGAACTGGGTA +
Preference number: 3 (lower is better)
Translates to: LCQQTWDSSSILSLSGQSNGGRD*QWWNWV
Trigger: TACCCAGTTCCACCATTGCAAATCCCTCCCACCATT...ACTCTGACCACTGAGACTCAGGATAGAGCTAGAATCCCAGGTCTGCTGACAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR GCA 72 bp TGCAGGGAAGCTGCACAGATATCTGGCATTTGGACCTaGCTACTAGCTGAAGATGAAGACCCAAAACAGGGA +
Preference number: 3 (lower is better)
Translates to: CREAAQISGIWT*LLAEDEDPKQG
Trigger: TCCCTGTTTTGGGTCTTCATCTTCAGCTAGTAGGCAGGTCCAAATGCCAGATATCTGTGCAGCTTCCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp AACTCAGAAAATGCTACAATCCCGGGTACTCTGGCATaGCCGAATCCACAGGATCACAGGATGTCAGGATCT +
Preference number: 3 (lower is better)
Translates to: NSENATIPGTLA*PNPQDHRMSGS
Trigger: AGATCCTGACATCCTGTGATCCTGTGGATTCGGGCATGCCAGAGTACCCGGGATTGTAGCATTTTCTGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp AGTTTCAATGGTGGGAGGGATTTGCAATGGTGGAACTaGGTAGAGAGGAGTATGGGGGCTGTTATCAGGATG +
Preference number: 3 (lower is better)
Translates to: SFNGGRDLQWWN*VERSMGAVIRM
Trigger: CATCCTGATAACAGCCCCCATACTCCTCTCTACCCAGTTCCACCATTGCAAATCCCTCCCACCATTGAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 72 bp CATTGCTGGTGGGATTGCAAGCTGGTACAACCGCTCTaGAAATCAGTTTGGCGATTCCTCAGAAAATTGGGC +
Preference number: 3 (lower is better)
Translates to: HCWWDCKLVQPL*KSVWRFLRKLG
Trigger: GCCCAATTTTCTGAGGAATCGCCAAACTGATTTCCAGAGCGGTTGTACCAGCTTGCAATCCCACCAGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 72 bp GCAATCTGTCAGCTTCTACTAAGACCTGGGTTGGACTaGATCTCTCCATCTCCAACTCAAGGAGGTTTGGGA +
Preference number: 3 (lower is better)
Translates to: AICQLLLRPGLD*ISPSPTQGGLG
Trigger: TCCCAAACCTCCTTGAGTTGGAGATGGAGAGATCCAGTCCAACCCAGGTCTTAGTAGAAGCTGACAGATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 72 bp AATGGGATGTGGATCCTATATTTTCTTCTCTGCCCATaGTGGAGGGCAGTTACTCACAGGAGCAGTGCAGTC +
Preference number: 3 (lower is better)
Translates to: NGMWILYFLLCP*WRAVTHRSSAV
Trigger: GACTGCACTGCTCCTGTGAGTAACTGCCCTCCACCATGGGCAGAGAAGAAAATATAGGATCCACATCCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp GTTTTCTTTGGTTGGTGGTTTAGTCCCAGGGAGCTCTaGAGGTCCTGGTTAGTTCACATTGCTGTTCCTCCT +
Preference number: 3 (lower is better)
Translates to: VFFGWWFSPREL*RSWLVHIAVPP
Trigger: AGGAGGAACAGCAATGTGAACTAACCAGGACCTCCAGAGCTCCCTGGGACTAAACCACCAACCAAAGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp TCCTCCTGTGATTCTGTTAGCCTTTGTCAGCAGACCTaGGATTCTAGCTCTATCCTGAGTCTCAGTGGTCAG +
Preference number: 3 (lower is better)
Translates to: SSCDSVSLCQQT*DSSSILSLSGQ
Trigger: CTGACCACTGAGACTCAGGATAGAGCTAGAATCCCAGGTCTGCTGACAAAGGCTAACAGAATCACAGGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp CACAAAACTCAGAAAATGCTACAATCCCGGGTACTCTaGCATGCCCGAATCCACAGGATCACAGGATGTCAG +
Preference number: 3 (lower is better)
Translates to: HKTQKMLQSRVL*HARIHRITGCQ
Trigger: CTGACATCCTGTGATCCTGTGGATTCGGGCATGCCAGAGTACCCGGGATTGTAGCATTTTCTGAGTTTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp AGGGTGAAATGGGCCATAGTAAAGCCTCCTCACCTCTaGAGTTCTGGAGATGTACAGAAGTGGTCCAAGCAT +
Preference number: 3 (lower is better)
Translates to: RVKWAIVKPPHL*SSGDVQKWSKH
Trigger: ATGCTTGGACCACTTCTGTACATCTCCAGAACTCCAGAGGTGAGGAGGCTTTACTATGGCCCATTTCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR-3UTR CAA 90 bp TTTCTACCCATAAGATTTCCAGGTATGCATCTTTGCCAGTGTTTGGGGGAGGGGCCTCTTCTGACATGGTaGTCTTTCCTTTTGGGGGTG +
Preference number: 3 (lower is better)
Translates to: FLPIRFPGMHLCQCLGEGPLLTW*SFLLGV
Trigger: CACCCCCAAAAGGAAAGACAACCATGTCAGAAGAGG...CCCCTCCCCCAAACACTGGCAAAGATGCATACCTGGAAATCTTATGGGTAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp CTTTGTCAGCAGACCTGGGATTCTAGCTCTATCCTGAGTCTCAGTGGTCAGAGTGTGTCTATTCCTCTGTaGAGGGACATCTGGGTTCTT +
Preference number: 3 (lower is better)
Translates to: LCQQTWDSSSILSLSGQSVSIPL*RDIWVL
Trigger: AAGAACCCAGATGTCCCTCAACAGAGGAATAGACAC...ACTCTGACCACTGAGACTCAGGATAGAGCTAGAATCCCAGGTCTGCTGACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp CAGGGCAAGTTACCAGAGCCTCAAAAAGAATATCCTTaGGCCTGTGAAGAGCTTTGTACATCTGGGGAGTCC +
Preference number: 3 (lower is better)
Translates to: QGKLPEPQKEYP*ACEELCTSGES
Trigger: GGACTCCCCAGATGTACAAAGCTCTTCACAGGCTCAAGGATATTCTTTTTGAGGCTCTGGTAACTTGCCCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp AAGGGCTTAGGGACTCAGTCAATTCCCCTTTGGCTTTaGCTTTGTTCTCATCTGTTTCCAGGTGGAAAGGCT +
Preference number: 3 (lower is better)
Translates to: KGLGTQSIPLWL*LCSHLFPGGKA
Trigger: AGCCTTTCCACCTGGAAACAGATGAGAACAAAGGCAAAGCCAAAGGGGAATTGACTGAGTCCCTAAGCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp TGCCATAGTGTCTGCATTTGGTTGATGATTATGGGATaGCTTGGTGGGGCAGTCTCTGGATGGTACATCCTT +
Preference number: 3 (lower is better)
Translates to: CHSVCIWLMIMG*LGGAVSGWYIL
Trigger: AAGGATGTACCATCCAGAGACTGCCCCACCAAGGCATCCCATAATCATCAACCAAATGCAGACACTATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp GAAAAGGAAAGTTTCAATGGTGGGAGGGATTTGCAATaGTGGAACTGGGTAGAGAGGAGTATGGGGGCTGTT +
Preference number: 3 (lower is better)
Translates to: EKESFNGGRDLQ*WNWVERSMGAV
Trigger: AACAGCCCCCATACTCCTCTCTACCCAGTTCCACCATTGCAAATCCCTCCCACCATTGAAACTTTCCTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 72 bp TTTCAGCAAGCTCTTGTTGGCATCCACAATAGTGTCTaGTATTGGTGGTTGTTCATGGGATGGATCCCCAGG +
Preference number: 3 (lower is better)
Translates to: FQQALVGIHNSV*YWWLFMGWIPR
Trigger: CCTGGGGATCCATCCCATGAACAACCACCAATACCAGACACTATTGTGGATGCCAACAAGAGCTTGCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp CTGCTTCCCTACCCACCCACTTCCAATTCTTGGCTATaGCATTCCTCTACACTCGGGCATATAAAGTTTGCA +
Preference number: 3 (lower is better)
Translates to: LLPYPPTSNSWL*HSSTLGHIKFA
Trigger: TGCAAACTTTATATGCCCGAGTGTAGAGGAATGCCATAGCCAAGAATTGGAAGTGGGTGGGTAGGGAAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp CAGTATCACAGGATCAGAGGTGCCCTGAGCAGACCTTaGGCACTAATTCCACAACCATTCTCACAAAACTCA +
Preference number: 3 (lower is better)
Translates to: QYHRIRGALSRP*ALIPQPFSQNS
Trigger: TGAGTTTTGTGAGAATGGTTGTGGAATTAGTGCCCAAGGTCTGCTCAGGGCACCTCTGATCCTGTGATACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp TGGTCACACCAGGATCTCAGGGTCTCAGAGAAACTTTaGCTGTCAAGAACTCTGAGACACCAAGAATCTCAG +
Preference number: 3 (lower is better)
Translates to: WSHQDLRVSEKL*LSRTLRHQESQ
Trigger: CTGAGATTCTTGGTGTCTCAGAGTTCTTGACAGTCAAAGTTTCTCTGAGACCCTGAGATCCTGGTGTGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR GCA 72 bp GGGGCTCTGCTATTTCCTGGAAAATATAGAAATGGTTaGTCACAATCATCCATTGGATGGAGCCCAAGGTCC +
Preference number: 3 (lower is better)
Translates to: GALLFPGKYRNG*SQSSIGWSPRS
Trigger: GGACCTTGGGCTCCATCCAATGGATGATTGTGAGCAACCATTTCTATATTTTCCAGGAAATAGCAGAGCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 72 bp AACAACCAGCATGCAAGGATCATCACCACGTCAGAATaGTCACCCAGTCAAAGACACTCAAGCCTGTTTTGT +
Preference number: 3 (lower is better)
Translates to: NNQHARIITTSE*SPSQRHSSLFC
Trigger: ACAAAACAGGCTTGAGTGTCTTTGACTGGGTGACCATTCTGACGTGGTGATGATCCTTGCATGCTGGTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 72 bp TGGAATAGAAGCAATCTGTCAGCTTCTACTAAGACCTaGGTTGGACTGGATCTCTCCATCTCCAACTCAAGG +
Preference number: 3 (lower is better)
Translates to: WNRSNLSASTKT*VGLDLSISNSR
Trigger: CCTTGAGTTGGAGATGGAGAGATCCAGTCCAACCCAGGTCTTAGTAGAAGCTGACAGATTGCTTCTATTCCA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 72 bp TTTCTAGCTCCACTGTGGACCCTGTGCTCTGTCCAATaGATGACTGTGAGCTTCCACATATGTATTTGTCAG +
Preference number: 3 (lower is better)
Translates to: FLAPLWTLCSVQ*MTVSFHICICQ
Trigger: CTGACAAATACATATGTGGAAGCTCACAGTCATCCATTGGACAGAGCACAGGGTCCACAGTGGAGCTAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp TTTTCCAAGGGCTTAGGGACTCAGTCAATTCCCCTTTaGCTTTGCCTTTGTTCTCATCTGTTTCCAGGTGGA +
Preference number: 3 (lower is better)
Translates to: FSKGLGTQSIPL*LCLCSHLFPGG
Trigger: TCCACCTGGAAACAGATGAGAACAAAGGCAAAGCCAAAGGGGAATTGACTGAGTCCCTAAGCCCTTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp ATGATTATGGGATGCCTTGGTGGGGCAGTCTCTGGATaGTACATCCTTTTGTCTCAGCTCCAAACTTTGTCT +
Preference number: 3 (lower is better)
Translates to: MIMGCLGGAVSG*YILLSQLQTLS
Trigger: AGACAAAGTTTGGAGCTGAGACAAAAGGATGTACCATCCAGAGACTGCCCCACCAAGGCATCCCATAATCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp GTTGATGATTATGGGATGCCTTGGTGGGGCAGTCTCTaGATGGTACATCCTTTTGTCTCAGCTCCAAACTTT +
Preference number: 3 (lower is better)
Translates to: VDDYGMPWWGSL*MVHPFVSAPNF
Trigger: AAAGTTTGGAGCTGAGACAAAAGGATGTACCATCCAGAGACTGCCCCACCAAGGCATCCCATAATCATCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp TGTCTGCATTTGGTTGATGATTATGGGATGCCTTGGTaGGGCAGTCTCTGGATGGTACATCCTTTTGTCTCA +
Preference number: 3 (lower is better)
Translates to: CLHLVDDYGMPW*GSLWMVHPFVS
Trigger: TGAGACAAAAGGATGTACCATCCAGAGACTGCCCCACCAAGGCATCCCATAATCATCAACCAAATGCAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp CAAAATCATGCTGGCATATGCCATAGTGTCTGCATTTaGTTGATGATTATGGGATGCCTTGGTGGGGCAGTC +
Preference number: 3 (lower is better)
Translates to: QNHAGICHSVCI*LMIMGCLGGAV
Trigger: GACTGCCCCACCAAGGCATCCCATAATCATCAACCAAATGCAGACACTATGGCATATGCCAGCATGATTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp TCTCTGGTTGGAGATGTTCCTCCTGTGATTCTGTTAGCCTTTGTCAGCAGACCTAGGGATAGGGGATATTaGATGAGGAAACTAGGAAAG +
Preference number: 3 (lower is better)
Translates to: SLVGDVPPVILLAFVSRPRDRGY*MRKLGK
Trigger: CTTTCCTAGTTTCCTCATCAAATATCCCCTATCCCT...AGGTCTGCTGACAAAGGCTAACAGAATCACAGGAGGAACATCTCCAACCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp ATCAAACAGCATGTGTCTTCAACTGGAGCAGCTATAATGAGATCATATTTGGGAAGTTCCAGTGGCCCCTaGGCCCTGTGTTTTCCGTTT +
Preference number: 3 (lower is better)
Translates to: IKQHVSSTGAAIMRSYLGSSSGP*ALCFPF
Trigger: AAACGGAAAACACAGGGCCAAGGGGCCACTGGAACT...TCCCAAATATGATCTCATTATAGCTGCTCCAGTTGAAGACACATGCTGTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp GACAATGTATTTGCTTGCTGCAGAAGTAACTCATTGAGTGAATGGGCTACAGCAGTCCAAGCATTGCAGTaGGTAACCACATTGGTCCTG +
Preference number: 3 (lower is better)
Translates to: DNVFACCRSNSLSEWATAVQALQ*VTTLVL
Trigger: CAGGACCAATGTGGTTACCAACTGCAATGCTTGGAC...TGCTGTAGCCCATTCACTCAATGAGTTACTTCTGCAGCAAGCAAATACATTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR TCA 72 bp AGAGCTTGCTGGCACGAGACTGATATAGCTGTCTCCTaGGGGGCTCTGCTATTTCCTGGAAAATATAGAAAT +
Preference number: 3 (lower is better)
Translates to: RACWHETDIAVS*GALLFPGKYRN
Trigger: ATTTCTATATTTTCCAGGAAATAGCAGAGCCCCTCAGGAGACAGCTATATCAGTCTCGTGCCAGCAAGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 72 bp TGGATTACAGGAAGGCCAGGCTCCAATCAGATATATTaGGGGCAGGATGCATTTGAGATAATCAGATGGCAG +
Preference number: 3 (lower is better)
Translates to: WITGRPGSNQIY*GQDAFEIIRWQ
Trigger: CTGCCATCTGATTATCTCAAATGCATCCTGCCCTCAATATATCTGATTGGAGCCTGGCCTTCCTGTAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 72 bp TCAGGGTCTCAGAGAAACTTTGACTGTCAAGAACTCTaGGACACCAAGAATCTCAGGATCATAGGATCCCAG +
Preference number: 3 (lower is better)
Translates to: SGSQRNFDCQEL*DTKNLRIIGSQ
Trigger: CTGGGATCCTATGATCCTGAGATTCTTGGTGTCTCAGAGTTCTTGACAGTCAAAGTTTCTCTGAGACCCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 72 bp GTAGAAAGTGCTTCCTCTGGGCCATCCCAGATAGAATaGTGGCAATTCATTCCTGCAAAAGACAGTTTCCCT +
Preference number: 3 (lower is better)
Translates to: VESASSGPSQIE*WQFIPAKDSFP
Trigger: AGGGAAACTGTCTTTTGCAGGAATGAATTGCCATCATTCTATCTGGGATGGCCCAGAGGAAGCACTTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 72 bp AGGGTTACACATGGCTTATGGAGGGGTCATGAGCCTTaGCACCCTCAGTCACTCAGTTCTTTTATTTCTAAG +
Preference number: 3 (lower is better)
Translates to: RVTHGLWRGHEP*HPQSLSSFISK
Trigger: CTTAGAAATAAAAGAACTGAGTGACTGAGGGTGTCAAGGCTCATGACCCCTCCATAAGCCATGTGTAACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp ACCACCACTACGGGGCTGGGACCTGTGTTCTTTTGTTaGATCAGGGTGTCACAGATTGCTTTAAGATTGAAT +
Preference number: 3 (lower is better)
Translates to: TTTTGLGPVFFC*IRVSQIALRLN
Trigger: ATTCAATCTTAAAGCAATCTGTGACACCCTGATTCAACAAAAGAACACAGGTCCCAGCCCCGTAGTGGTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp CTAGGATATCCTCTGCTACATATGCAGTTGGAGCCATaGGTCCCACCATGTGTTTTCTTTGGTTGGTGGTTT +
Preference number: 3 (lower is better)
Translates to: LGYPLLHMQLEP*VPPCVFFGWWF
Trigger: AAACCACCAACCAAAGAAAACACATGGTGGGACTCATGGCTCCAACTGCATATGTAGCAGAGGATATCCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp AATAAATCTGTGCTTCGTTCCAAAGTGAACAAAGGGTaGCTAGCTGCTGCTAGTGGCAGACTGAAGAACCCA +
Preference number: 3 (lower is better)
Translates to: NKSVLRSKVNKG*LAAASGRLKNP
Trigger: TGGGTTCTTCAGTCTGCCACTAGCAGCAGCTAGTCACCCTTTGTTCACTTTGGAACGAAGCACAGATTTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp CTTGTCTGGCCTGGGATAGCAGGCATTGCCTTATCTTaGGTATGTACTAGTCATCAAACAGCATGTGTCTTC +
Preference number: 3 (lower is better)
Translates to: LVWPGIAGIALS*VCTSHQTACVF
Trigger: GAAGACACATGCTGTTTGATGACTAGTACATACTCAAGATAAGGCAATGCCTGCTATCCCAGGCCAGACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp CTCTCATTTCTCATTCACTGCTCTAGCATCTCACTATaGTGGAGCATCACCTTAGACAAATCCGTGAGCCTT +
Preference number: 3 (lower is better)
Translates to: LSFLIHCSSISL*WSITLDKSVSL
Trigger: AAGGCTCACGGATTTGTCTAAGGTGATGCTCCAGCATAGTGAGATGCTAGAGCAGTGAATGAGAAATGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp ACTCTTCTGCCCCCTAGTGGCCTCAAAAAGAGACTGTaGAATCTCTGTGAATCCTGGTACACAAAGTATGAA +
Preference number: 3 (lower is better)
Translates to: TLLPPSGLKKRL*NLCESWYTKYE
Trigger: TTCATACTTTGTGTACCAGGATTCACAGAGATTGCACAGTCTCTTTTTGAGGCCACTAGGGGGCAGAAGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp TCCAGCTTGTATCTTTGCACCATTTGCGTGGAAAATTaGTTCCCAGCCTTTCACTCTGAGGTAGTGTCTTTC +
Preference number: 3 (lower is better)
Translates to: SSLYLCTICVEN*FPAFHSEVVSF
Trigger: GAAAGACACTACCTCAGAGTGAAAGGCTGGGAAGCAATTTTCCACGCAAATGGTGCAAAGATACAAGCTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp ACTAATTCCACAACCATTCTCACAAAACTCAGAAAATaGTACAATCCCGGGTACTCTGGCATGCCCGAATCC +
Preference number: 3 (lower is better)
Translates to: TNSTTILTKLRK*YNPGYSGMPES
Trigger: GGATTCGGGCATGCCAGAGTACCCGGGATTGTAGCATTTTCTGAGTTTTGTGAGAATGGTTGTGGAATTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp ACAAAATCACAGAGAAAGATAGATTCTGAGGAGTTCTaGCTCAACCTGGATTACAGGAAGGCCAGGCTCCAA +
Preference number: 3 (lower is better)
Translates to: TKSQRKIDSEEF*LNLDYRKARLQ
Trigger: TTGGAGCCTGGCCTTCCTGTAATCCAGGTTGAGCCAGAACTCCTCAGAATCTATCTTTCTCTGTGATTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 72 bp TGGACTGGATCTCTCCATCTCCAACTCAAGGAGGTTTaGGAGTATCCTTTGAATGAACCCTGTTTAGGAACA +
Preference number: 3 (lower is better)
Translates to: WTGSLHLQLKEV*EYPLNEPCLGT
Trigger: TGTTCCTAAACAGGGTTCATTCAAAGGATACTCCCAAACCTCCTTGAGTTGGAGATGGAGAGATCCAGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp TTTCAGGTTCACAGGATATCAGAATCACAGGATCACAGAGACAGGTGCACTCTGTACACCTATGGTCACTaGATCTTTGACAAAGGAGCT +
Preference number: 3 (lower is better)
Translates to: FQVHRISESQDHRDRCTLYTYGH*IFDKGA
Trigger: AGCTCCTTTGTCAAAGATCAAGTGACCATAGGTGTA...CAGAGTGCACCTGTCTCTGTGATCCTGTGATTCTGATATCCTGTGAACCTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 72 bp GCTAGACAAGGGACCAGTATCCCTTGTTCCCAGAGTTaGGTTATGTGTGGCATTATTTCCAAACTCACCTTT +
Preference number: 3 (lower is better)
Translates to: ARQGTSIPCSQS*VMCGIISKLTF
Trigger: AAAGGTGAGTTTGGAAATAATGCCACACATAACTCAACTCTGGGAACAAGGGATACTGGTCCCTTGTCTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp TTCTCAGGATCAAGGGCCTTTCCTTTCATTGATGACTaGCTAGGATATCCTCTGCTACATATGCAGTTGGAG +
Preference number: 3 (lower is better)
Translates to: FSGSRAFPFIDD*LGYPLLHMQLE
Trigger: CTCCAACTGCATATGTAGCAGAGGATATCCTAGTCAGTCATCAATGAAAGGAAAGGCCCTTGATCCTGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp TCTTTCTCCCTATCCTCTGCAGCATCTACTGTCACCTaGATTTTTATCTTAGCCATTCTGACTGGTGTGAGG +
Preference number: 3 (lower is better)
Translates to: SFSLSSAASTVT*IFILAILTGVR
Trigger: CCTCACACCAGTCAGAATGGCTAAGATAAAAATTCAGGTGACAGTAGATGCTGCAGAGGATAGGGAGAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp CACAGGATATCAGAATCACAGGATCACAGAGACAGGTaGACTCTGAGGAGTTCTGAGACAAACAGGATAAAA +
Preference number: 3 (lower is better)
Translates to: HRISESQDHRDR*TLRSSETNRIK
Trigger: TTTTATCCTGTTTGTCTCAGAACTCCTCAGAGTGCACCTGTCTCTGTGATCCTGTGATTCTGATATCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp AGATGCAGAGAAATATTCCTGCAGTGGAGGTTAAGATaGAGAAAACCTCCACTGCAACTAAGGCCTTTCCAT +
Preference number: 3 (lower is better)
Translates to: RCREIFLQWRLR*RKPPLQLRPFH
Trigger: ATGGAAAGGCCTTAGTTGCAGTGGAGGTTTTCTGCATCTTAACCTCCACTGCAGGAATATTTCTCTGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR CCA 72 bp GATTGCAAGCTGGTACAACCGCTCTGGAAATCAGTTTaGCGATTCCTCAGAAAATTGGGCAAAGTTTTACTG +
Preference number: 3 (lower is better)
Translates to: DCKLVQPLWKSV*RFLRKLGKVLL
Trigger: CAGTAAAACTTTGCCCAATTTTCTGAGGAATCGCCAAACTGATTTCCAGAGCGGTTGTACCAGCTTGCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 72 bp TCATTTCTCATTCACTGCTCTAGCATCTCACTATGCTaGAGCATCACCTTAGACAAATCCGTGAGCCTTCTA +
Preference number: 3 (lower is better)
Translates to: SFLIHCSSISLC*SITLDKSVSLL
Trigger: TAGAAGGCTCACGGATTTGTCTAAGGTGATGCTCCAGCATAGTGAGATGCTAGAGCAGTGAATGAGAAATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp GAAATAAAGATGGTCAGGATTGTCTCTTGTCTGGCCTaGGATAGCAGGCATTGCCTTATCTTGAGTATGTAC +
Preference number: 3 (lower is better)
Translates to: EIKMVRIVSCLA*DSRHCLILSMY
Trigger: GTACATACTCAAGATAAGGCAATGCCTGCTATCCCAGGCCAGACAAGAGACAATCCTGACCATCTTTATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp CCATGGGGTCTTCATAAGACAGGAATGTCACAATTTTaGAGAGACAGTGCGTTCCTTCTGGATTGGCATATT +
Preference number: 3 (lower is better)
Translates to: PWGLHKTGMSQF*RDSAFLLDWHI
Trigger: AATATGCCAATCCAGAAGGAACGCACTGTCTCTCCAAAATTGTGACATTCCTGTCTTATGAAGACCCCATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR TCA 72 bp AGGCTCCAATCAGATATATTGAGGGCAGGATGCATTTaGGATAATCAGATGGCAGGAGGCAAGTATAAGAAC +
Preference number: 3 (lower is better)
Translates to: RLQSDILRAGCI*DNQMAGGKYKN
Trigger: GTTCTTATACTTGCCTCCTGCCATCTGATTATCTCAAATGCATCCTGCCCTCAATATATCTGATTGGAGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 72 bp TCTCCAACTCAAGGAGGTTTGGGAGTATCCTTTGAATaGACCCTGTTTAGGAACAAGTTGTCAGTACATCTG +
Preference number: 3 (lower is better)
Translates to: SPTQGGLGVSFE*TLFRNKLSVHL
Trigger: CAGATGTACTGACAACTTGTTCCTAAACAGGGTTCATTCAAAGGATACTCCCAAACCTCCTTGAGTTGGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 72 bp ATCTATCCAGGATCTTCTGGCTTTCATAGTCTCTGGTaGAAAGTCTGGTGTAATTCTGATAGGCCTGCCTTT +
Preference number: 3 (lower is better)
Translates to: IYPGSSGFHSLW*KVWCNSDRPAF
Trigger: AAAGGCAGGCCTATCAGAATTACACCAGACTTTTCACCAGAGACTATGAAAGCCAGAAGATCCTGGATAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp TCTTTCTCCACATCCTGGTCACCACTAGTTGTTACCTaGGTTTTTGATCTTAGCCATTCTGAGTGGTGTGAT +
Preference number: 3 (lower is better)
Translates to: SFSTSWSPLVVT*VFDLSHSEWCD
Trigger: ATCACACCACTCAGAATGGCTAAGATCAAAAACTCAGGTAACAACTAGTGGTGACCAGGATGTGGAGAAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp CTTGGTTCCTTAAAAAGATACCAAATACAGCAGCTGTaGGAGCAGAAAACCCTAGTGCCAAACAAGCCAGAA +
Preference number: 3 (lower is better)
Translates to: LGSLKRYQIQQL*EQKTLVPNKPE
Trigger: TTCTGGCTTGTTTGGCACTAGGGTTTTCTGCTCTCACAGCTGCTGTATTTGGTATCTTTTTAAGGAACCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR GCA 72 bp TTGAACCAGAAAAGGAATGCAGTTCCTAACAAGCCCTaGAGAATTTTCTCTACCCACACACCAGGAATTTCT +
Preference number: 3 (lower is better)
Translates to: LNQKRNAVPNKP*RIFSTHTPGIS
Trigger: AGAAATTCCTGGTGTGTGGGTAGAGAAAATTCTGCAGGGCTTGTTAGGAACTGCATTCCTTTTCTGGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp TCCTCAGGTAGTACTATGTCAAATTTTCTGAGGAACTaGCAGACTGATTTCCAGAGTGGTTGTATCAGCTTG +
Preference number: 3 (lower is better)
Translates to: SSGSTMSNFLRN*QTDFQSGCISL
Trigger: CAAGCTGATACAACCACTCTGGAAATCAGTCTGGCAGTTCCTCAGAAAATTTGACATAGTACTACCTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp GTTCAGTGTGACCATGTCTGTGCTACCAAACTAATCTaGGTTCTCTTGAAAATTAGTCAGTCTCTTAGCTGC +
Preference number: 3 (lower is better)
Translates to: VQCDHVCATKLI*VLLKISQSLSC
Trigger: GCAGCTAAGAGACTGACTAATTTTCAAGAGAACCCAGATTAGTTTGGTAGCACAGACATGGTCACACTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 72 bp GCCACTTCTCTTCCATATGTCATATTATTTAACACTTaGGTACCAGATCTCTCCTTCCAAGTAGCCACCAGT +
Preference number: 3 (lower is better)
Translates to: ATSLPYVILFNT*VPDLSFQVATS
Trigger: ACTGGTGGCTACTTGGAAGGAGAGATCTGGTACCCAAGTGTTAAATAATATGACATATGGAAGAGAAGTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp TCACTTCCCTTAAGTCTTGTATGGGATGGGAGTCACTaGTTTGTGGTTTTCATACTGGAAAGAGGGAAGTAT +
Preference number: 3 (lower is better)
Translates to: SLPLSLVWDGSH*FVVFILERGKY
Trigger: ATACTTCCCTCTTTCCAGTATGAAAACCACAAACCAGTGACTCCCATCCCATACAAGACTTAAGGGAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp TTCAAGTTCACTAGGTCTCCAGCAGGATTTACAAAATaGATGTTCTTCAGGGAAGAGAGCACCTGCAAAGAA +
Preference number: 3 (lower is better)
Translates to: FKFTRSPAGFTK*MFFREESTCKE
Trigger: TTCTTTGCAGGTGCTCTCTTCCCTGAAGAACATCCATTTTGTAAATCCTGCTGGAGACCTAGTGAACTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR TCA 72 bp CCTAAGCGAGGTAACCCAATCACAAAAGAAGACACATaGTATGCACTAATGGATAAGTTGATACTAGCCCAG +
Preference number: 3 (lower is better)
Translates to: PKRGNPITKEDT*YALMDKLILAQ
Trigger: CTGGGCTAGTATCAACTTATCCATTAGTGCATATCATGTGTCTTCTTTTGTGATTGGGTTACCTCGCTTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 72 bp CTCTACCCAACTCTTTCTATGAGACCACACATAATCTaGTACCTAAACCACCCAAAGACCCAACAAAGAAAG +
Preference number: 3 (lower is better)
Translates to: LYPTLSMRPHII*YLNHPKTQQRK
Trigger: CTTTCTTTGTTGGGTCTTTGGGTGGTTTAGGTATCAGATTATGTGTGGTCTCATAGAAAGAGTTGGGTAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 72 bp ACTCAAGTAGTATGCAAGAACAGAGAGCTTTTATTCTaGAGAAACAACCAGCATGCAAGGATCATCACCACG +
Preference number: 3 (lower is better)
Translates to: TQVVCKNRELLF*RNNQHARIITT
Trigger: CGTGGTGATGATCCTTGCATGCTGGTTGTTTCTTCAGAATAAAAGCTCTCTGTTCTTGCATACTACTTGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 72 bp GGCTGCCCTTGTGTTTGGAGCATAGATATTCAGAATTaGCAGTTCCTCTTGGAACATTTTACCTTTGATGAG +
Preference number: 3 (lower is better)
Translates to: GCPCVWSIDIQN*QFLLEHFTFDE
Trigger: CTCATCAAAGGTAAAATGTTCCAAGAGGAACTGTCAATTCTGAATATCTATGCTCCAAACACAAGGGCAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp GAGAGTAGGGTATTGAAGTCTCCCACTATTATTGTGTaGGGTGCAATGTGTGCGTTGAGCTTTACTAAAGTT +
Preference number: 3 (lower is better)
Translates to: ESRVLKSPTIIV*GAMCALSFTKV
Trigger: AACTTTAGTAAAGCTCAACGCACACATTGCACCTCACACAATAATAGTGGGAGACTTCAATACCCTACTCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp CTTCTCAGAACCTCCTCATGGTACCTTCTTCATAACTaGCCATATTATTGGTCACAAATCAGTCCTCAACAC +
Preference number: 3 (lower is better)
Translates to: LLRTSSWYLLHN*PYYWSQISPQH
Trigger: GTGTTGAGGACTGATTTGTGACCAATAATATGGTCAGTTATGAAGAAGGTACCATGAGGAGGTTCTGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp GCCCAAATATCCCAGGACACAGTAGAAGGCAATAACTaGACCTTTGTTGCAAACAACCAAAATATGACCATG +
Preference number: 3 (lower is better)
Translates to: AQISQDTVEGNN*TFVANNQNMTM
Trigger: CATGGTCATATTTTGGTTGTTTGCAACAAAGGTTCAGTTATTGCCTTCTACTGTGTCCTGGGATATTTGGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR GCA 72 bp AATCAAATCAAAGACCACAAAATAAACCCACTATTCTaGTGTGATGACTTGTATGGGCTTGGCCCAGTGAGT +
Preference number: 3 (lower is better)
Translates to: NQIKDHKINPLF*CDDLYGLGPVS
Trigger: ACTCACTGGGCCAAGCCCATACAAGTCATCACAGCAGAATAGTGGGTTTATTTTGTGGTCTTTGATTTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR GCA 72 bp TGCCCTTATTACCATTTGGAACATATTCTGGATATTTaGCCAGGAGAGGTATTGCTGGATCATTCGGTAGTA +
Preference number: 3 (lower is better)
Translates to: CPYYHLEHILDI*PGEVLLDHSVV
Trigger: TACTACCGAATGATCCAGCAATACCTCTCCTGGGCAAATATCCAGAATATGTTCCAAATGGTAATAAGGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp AAATATAGAAATGGTTGCTCACAATCATCCATTGGATaGAGCCCAAGGTCCCCAATGAAGGAGTTAGAGAAT +
Preference number: 3 (lower is better)
Translates to: KYRNGCSQSSIG*SPRSPMKELEN
Trigger: ATTCTCTAACTCCTTCATTGGGGACCTTGGGCTCCATCCAATGGATGATTGTGAGCAACCATTTCTATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 72 bp GAATGTCACAATTTTGGAGAGACAGTGCGTTCCTTCTaGATTGGCATATTGATTATCTGGGCACTTGAAACA +
Preference number: 3 (lower is better)
Translates to: ECHNFGETVRSF*IGILIIWALET
Trigger: TGTTTCAAGTGCCCAGATAATCAATATGCCAATCCAGAAGGAACGCACTGTCTCTCCAAAATTGTGACATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR CCA 72 bp ACCATGTTCAATATGCCCATCACTATCAACAAATGGTaGAGAAGTTCCCAGCCAGATTCCACAAATAATCAG +
Preference number: 3 (lower is better)
Translates to: TMFNMPITINKW*RSSQPDSTNNQ
Trigger: CTGATTATTTGTGGAATCTGGCTGGGAACTTCTCCACCATTTGTTGATAGTGATGGGCATATTGAACATGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR-3UTR CAA 90 bp ATGTTGGGTCCTGTTGGTGTAGCCAGTCTATTAGTCTATGTCTTTTTATTAGGGAAGAACCTTGAATATTaGGGCAGAGGGGAAAGATTC +
Preference number: 3 (lower is better)
Translates to: MLGPVGVASLLVYVFLLGKNLEY*GRGERF
Trigger: GAATCTTTCCCCTCTGCCCAAATATTCAAGGTTCTT...CCCTAATAAAAAGACATAGACTAATAGACTGGCTACACCAACAGGACCCAACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp ACCCAAAAATTTCACCAGAGCTCTCCTAAACCTGATAAACAACATCAGCAGAGGGGACTTTGGGGTATGTaGCTTGAGAAAATGGTTTAT +
Preference number: 3 (lower is better)
Translates to: TQKFHQSSPKPDKQHQQRGLWGM*LEKMVY
Trigger: ATAAACCATTTTCTCAAGCAACATACCCCAAAGTCC...CCTCTGCTGATGTTGTTTATCAGGTTTAGGAGAGCTCTGGTGAAATTTTTGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp TTGATATGTAACAGGAACCAACATTTTGCTGCATATTGGAAACATACTTCAGTGGGGGGTTTCATCATCTaGTTCCTGGACTTTGGGGTA +
Preference number: 3 (lower is better)
Translates to: LICNRNQHFAAYWKHTSVGGFII*FLDFGV
Trigger: TACCCCAAAGTCCAGGAACAAGATGATGAAACCCCC...CACTGAAGTATGTTTCCAATATGCAGCAAAATGTTGGTTCCTGTTACATATCAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp GCTGTGCTAAGATTAAAACACATATCTCTGAGTGCCTCCAAAATGAAACATGGACAGATTCACAGTACATaGATTTCCACTTGCCTCTGG +
Preference number: 3 (lower is better)
Translates to: AVLRLKHISLSASKMKHGQIHST*ISTCLW
Trigger: CCAGAGGCAAGTGGAAATCAATGTACTGTGAATCTG...TCCATGTTTCATTTTGGAGGCACTCAGAGATATGTGTTTTAATCTTAGCACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp ATGTTGGGTCCTGTTGGTGTAGCCAGTCTATTAGTCTATGTCTTTTTATTAGGGAAGGCAACCAACAGGTaGGGAAAAATATCTTTACCA +
Preference number: 3 (lower is better)
Translates to: MLGPVGVASLLVYVFLLGKATNR*GKISLP
Trigger: TGGTAAAGATATTTTTCCCAACCTGTTGGTTGCCTT...CCCTAATAAAAAGACATAGACTAATAGACTGGCTACACCAACAGGACCCAACAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp AGGCTACTATACCCAGCAAACCTCCCAATTACCATAGACAGAGAAAACAAGATAATCTTCAACAAATGTTaGCTGCCTCAAATGGCCTTT +
Preference number: 3 (lower is better)
Translates to: RLLYPANLPITIDRENKIIFNKC*LPQMAF
Trigger: AAAGGCCATTTGAGGCAGCAAACATTTGTTGAAGAT...TATCTTGTTTTCTCTGTCTATGGTAATTGGGAGGTTTGCTGGGTATAGTAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp AGTGGTCCAAGCATTGCAGTTGGTAACCACATTGGTCCTGTAAGTACAATTAAACTCTTACAAAGCAGGTaGATTTATGTGTGCAATCCA +
Preference number: 3 (lower is better)
Translates to: SGPSIAVGNHIGPVSTIKLLQSR*IYVCNP
Trigger: TGGATTGCACACATAAATCAACCTGCTTTGTAAGAG...TTTAATTGTACTTACAGGACCAATGTGGTTACCAACTGCAATGCTTGGACCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR TCA 72 bp ACTGAGAATTACAGAGGAGAAAATGTGGAAGAACCTTaGATATTTGGGCAGAGGGGAAAGATTCATGAACAG +
Preference number: 3 (lower is better)
Translates to: TENYRGENVEEP*IFGQRGKIHEQ
Trigger: CTGTTCATGAATCTTTCCCCTCTGCCCAAATATTCAAGGTTCTTCCACATTTTCTCCTCTGTAATTCTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 72 bp ATATCAAAATTACACCTGACTTCTCCTCAGAGACTATaGAAGCCAGAAGATCCTGGGCAGATTTCATACAGA +
Preference number: 3 (lower is better)
Translates to: ISKLHLTSPQRL*KPEDPGQISYR
Trigger: TCTGTATGAAATCTGCCCAGGATCTTCTGGCTTTCATAGTCTCTGAGGAGAAGTCAGGTGTAATTTTGATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 72 bp GGGCTAATATCCACTCATCAGAGAGTACATATCAAGTaGCATTTTTGTGATTGGGTTACCTCACTAAGGTTG +
Preference number: 3 (lower is better)
Translates to: GLISTHQRVHIK*HFCDWVTSLRL
Trigger: CAACCTTAGTGAGGTAACCCAATCACAAAAATGTCACTTGATATGTACTCTCTGATGAGTGGATATTAGCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp CCGAATCCAAAAACACATCAAAACGATCATCCATTGTaGTCATGTAGGCTTCATTCCAGGGATTCAGGAATA +
Preference number: 3 (lower is better)
Translates to: PNPKTHQNDHPL*SCRLHSRDSGI
Trigger: TATTCCTGAATCCCTGGAATGAAGCCTACATGATCACAATGGATGATCGTTTTGATGTGTTTTTGGATTCGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp ACCTCAATGGGAATGCTTTTAAGAGGATTGCGGCTGTaGCTACACACATTTAGGAATAATTACATCCTTCAG +
Preference number: 3 (lower is better)
Translates to: TSMGMLLRGLRL*LHTFRNNYILQ
Trigger: CTGAAGGATGTAATTATTCCTAAATGTGTGTAGTCACAGCCGCAATCCTCTTAAAAGCATTCCCATTGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR GCA 72 bp AGCAAGACAAAGATAAAGAAACATAATACACAGAGTTaGGCCCCTACTCATCAATATCAGGGAGTCAATCAC +
Preference number: 3 (lower is better)
Translates to: SKTKIKKHNTQS*APTHQYQGVNH
Trigger: GTGATTGACTCCCTGATATTGATGAGTAGGGGCGCAACTCTGTGTATTATGTTTCTTTATCTTTGTCTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR GCA 72 bp CCTTTCCCAACATTATTTGACAATGTATTTGCTTGCTaGAGAAGTAACTCATTGAGTGAATGGGCTACAGCA +
Preference number: 3 (lower is better)
Translates to: PFPTLFDNVFAC*RSNSLSEWATA
Trigger: TGCTGTAGCCCATTCACTCAATGAGTTACTTCTGCAGCAAGCAAATACATTGTCAAATAATGTTGGGAAAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR CCA 72 bp TCTAGGAGATGTTGCCAGATAGTTATGCATGGAGCTTaGTCAGAGTGTCAAGTATTTCCATACATAATACCT +
Preference number: 3 (lower is better)
Translates to: SRRCCQIVMHGA*SECQVFPYIIP
Trigger: AGGTATTATGTATGGAAATACTTGACACTCTGACCAAGCTCCATGCATAACTATCTGGCAACATCTCCTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 72 bp TTCCAATTGTATAGATCATTAGTGGAAAATGGGATGTaGATCCTATATTTTCTTCTCTGCCCATGGTGGAGG +
Preference number: 3 (lower is better)
Translates to: FQLYRSLVENGM*ILYFLLCPWWR
Trigger: CCTCCACCATGGGCAGAGAAGAAAATATAGGATCCACATCCCATTTTCCACTAATGATCTATACAATTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp CTTCAATTTTCTTCTTCACTTCCCTTAAGTCTTGTATaGGATGGGAGTCACTGGTTTGTGGTTTTCATACTG +
Preference number: 3 (lower is better)
Translates to: LQFSSSLPLSLV*DGSHWFVVFIL
Trigger: CAGTATGAAAACCACAAACCAGTGACTCCCATCCCATACAAGACTTAAGGGAAGTGAAGAAGAAAATTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp AATGAACATAGTGGAGCATGTGCCCTTATTACCATTTaGAACATATTCTGGATATTTGCCCAGGAGAGGTAT +
Preference number: 3 (lower is better)
Translates to: NEHSGACALITI*NIFWIFAQERY
Trigger: ATACCTCTCCTGGGCAAATATCCAGAATATGTTCCAAATGGTAATAAGGGCACATGCTCCACTATGTTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp GGAGAAGTTCCCAGCCAGATTCCACAAATAATCAGTTaGATCATGGTGCATATAGGAATGATCAAGATTGAT +
Preference number: 3 (lower is better)
Translates to: GEVPSQIPQIIS*IMVHIGMIKID
Trigger: ATCAATCTTGATCATTCCTATATGCACCATGATCCAACTGATTATTTGTGGAATCTGGCTGGGAACTTCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR-3UTR CAA 90 bp AGTGGTCCAAGCATTGCAGTTGGTAACCACATTGGTCCTGTAAGTACAATTAAAATTCGGGGTAATTATTaGCTGTTTTCTAGAGGAAAC +
Preference number: 3 (lower is better)
Translates to: SGPSIAVGNHIGPVSTIKIRGNY*LFSRGN
Trigger: GTTTCCTCTAGAAAACAGCAAATAATTACCCCGAAT...TTTAATTGTACTTACAGGACCAATGTGGTTACCAACTGCAATGCTTGGACCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR-3UTR CAA 90 bp CCCTACCTCAGAGTCAAAGGTTGCAAACAATTTTTCAAGCAAATGGTCACAAGAATTCGGGGTAATTATTaGCTGTTTTCTAGAGGAAAC +
Preference number: 3 (lower is better)
Translates to: PYLRVKGCKQFFKQMVTRIRGNY*LFSRGN
Trigger: GTTTCCTCTAGAAAACAGCAAATAATTACCCCGAAT...TCTTGTGACCATTTGCTTGAAAAATTGTTTGCAACCTTTGACTCTGAGGTAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAGAACTGGGTCTGTTTTaGGAAGTAAGGGAATATGAT +
Preference number: 3 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSAELGLF*EVREYD
Trigger: ATCATATTCCCTTACTTCCAAAAACAGACCCAGTTC...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
3UTR-3UTR CAA 90 bp TGGGCACTTGAAACAATAATCCATGTCTGTCATATTGGAAATCTCATTCTCTGGGAACTGGGTCTGTTTTaGGAAGTAAGGGAATATGAT +
Preference number: 3 (lower is better)
Translates to: WALETIIHVCHIGNLILWELGLF*EVREYD
Trigger: ATCATATTCCCTTACTTCCAAAAACAGACCCAGTTC...CCAGAGAATGAGATTTCCAATATGACAGACATGGATTATTGTTTCAAGTGCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR-3UTR CAA 90 bp TTTGCATTTCTTCTCTCAATTCAGAGGCAAATTGAAGTCCTAGACCGTCATCTGTATTTAAGGCATGATTaGGAACTGGGTCTGTTTTTG +
Preference number: 3 (lower is better)
Translates to: FAFLLSIQRQIEVLDRHLYLRHD*ELGLFL
Trigger: CAAAAACAGACCCAGTTCCAAATCATGCCTTAAATA...CAGATGACGGTCTAGGACTTCAATTTGCCTCTGAATTGAGAGAAGAAATGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR-3UTR CAA 90 bp ATTAAAACACATATCTCTGAGTGCCTCCAAAATGAAACATGGAGAGAGAGCATAGCATACCTCCCTTCATaGAATACAGCAAAAACACAC +
Preference number: 3 (lower is better)
Translates to: IKTHISECLQNETWRESIAYLPS*NTAKTH
Trigger: GTGTGTTTTTGCTGTATTCAATGAAGGGAGGTATGC...TATGCTCTCTCTCCATGTTTCATTTTGGAGGCACTCAGAGATATGTGTTTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGAACCCCTTCAGCTTCTTaGGTAATTTCTCTAGTTCCT +
Preference number: 3 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRTPSAS*VISLVP
Trigger: AGGAACTAGAGAAATTACCAAAGAAGCTGAAGGGGT...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp TCTTTTGAAGGGCTGGATTCCTGGAAAGATATTGTGTaGATTTGGTTTTGTCCTGGAATACTTTGGTTTCTC +
Preference number: 3 (lower is better)
Translates to: SFEGLDSWKDIV*IWFCPGILWFL
Trigger: GAGAAACCAAAGTATTCCAGGACAAAACCAAATTCACACAATATCTTTCCAGGAATCCAGCCCTTCAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp ATTTCAAAGATCTGTCCATTTGTGAGAGTAGGGTATTaGAGTCTCCCACTATTATTGTGTGAGGTGCAATGT +
Preference number: 3 (lower is better)
Translates to: ISKICPFVRVGY*SLPLLLCEVQC
Trigger: ACATTGCACCTCACACAATAATAGTGGGAGACTTCAATACCCTACTCTCACAAATGGACAGATCTTTGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp GGTAGCACTGGAGAAAATCAAATGGTAGAAGGCAAGTaGGAGAACATAAGCAACATAAACCAAGGTTATTTG +
Preference number: 3 (lower is better)
Translates to: GSTGENQMVEGK*ENISNINQGYL
Trigger: CAAATAACCTTGGTTTATGTTGCTTATGTTCTCTCACTTGCCTTCTACCATTTGATTTTCTCCAGTGCTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp TTGACAATGTATTTGCTTGCTGCAGAAGTAACTCATTaGGTGAATGGGCTACAGCATACACAGCATTGTATA +
Preference number: 3 (lower is better)
Translates to: LTMYLLAAEVTH*VNGLQHTQHCI
Trigger: TATACAATGCTGTGTATGCTGTAGCCCATTCACTCAATGAGTTACTTCTGCAGCAAGCAAATACATTGTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR GCA 72 bp ATATCAGTCTCCTTTCAACAAAATCATGCTGGCATATaGCATAGTGTCTGCATTTGGTTGATGATTATGGGA +
Preference number: 3 (lower is better)
Translates to: ISVSFQQNHAGI*HSVCIWLMIMG
Trigger: TCCCATAATCATCAACCAAATGCAGACACTATGGCATATGCCAGCATGATTTTGTTGAAAGGAGACTGATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp AGTCCTTTCCCAACATTATTTGACAATGTATTTGCTTaGTGCAGAAGTAACTCATTGAGTGAATGGGCTACA +
Preference number: 3 (lower is better)
Translates to: SPFPTLFDNVFA*CRSNSLSEWAT
Trigger: TGTAGCCCATTCACTCAATGAGTTACTTCTGCAGCAAGCAAATACATTGTCAAATAATGTTGGGAAAGGACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR CCA 72 bp GTATGTACTAGTCATCAAACAGCATGTGTCTTCAACTaGAGCAGCTATAATGAGATCATATTTGGGATTAGG +
Preference number: 3 (lower is better)
Translates to: VCTSHQTACVFN*SSYNEIIFGIR
Trigger: CCTAATCCCAAATATGATCTCATTATAGCTGCTCCAGTTGAAGACACATGCTGTTTGATGACTAGTACATAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp GTCTATTTGGAGTACTGTAGGCTTCTTGTATGTTCTTaGGCATCTCTTTCTTTAGGTTTGGGAAGTTTTCTT +
Preference number: 3 (lower is better)
Translates to: VYLEYCRLLVCS*ASLSLGLGSFL
Trigger: AAGAAAACTTCCCAAACCTAAAGAAAGAGATGCCCAAGAACATACAAGAAGCCTACAGTACTCCAAATAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp TGGGATTCCTGTAAGCAACAAAATGTTGGGTCCTGTTaGTGTAGCCAGTCTATTAGTCTATGTCTTTTTATT +
Preference number: 3 (lower is better)
Translates to: WDSCKQQNVGSC*CSQSISLCLFI
Trigger: AATAAAAAGACATAGACTAATAGACTGGCTACACCAACAGGACCCAACATTTTGTTGCTTACAGGAATCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp AGAGAGAGAGATAGATCAATTGAGCCTATCACTAGATaGGTTTTGTGCAGAATTCTATCAGACCTTCAAAGA +
Preference number: 3 (lower is better)
Translates to: RERDRSIEPITR*VLCRILSDLQR
Trigger: TCTTTGAAGGTCTGATAGAATTCTGCACAAAACCCATCTAGTGATAGGCTCAATTGATCTATCTCTCTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAATTCGGGGTAATTATTaGCTGTTTTCTAGAGGAAAC +
Preference number: 3 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSAIRGNY*LFSRGN
Trigger: GTTTCCTCTAGAAAACAGCAAATAATTACCCCGAAT...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
3UTR-3UTR CAA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATATTTAAGGCATGATTaGGAACTGGGTCTGTTTTTG +
Preference number: 3 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSAYLRHD*ELGLFL
Trigger: CAAAAACAGACCCAGTTCCAAATCATGCCTTAAATA...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
3UTR-3UTR CAA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTTATTTAAGGCATGATTaGGAACTGGGTCTGTTTTTG +
Preference number: 3 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACYLRHD*ELGLFL
Trigger: CAAAAACAGACCCAGTTCCAAATCATGCCTTAAATA...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
3UTR-3UTR CAA 90 bp ATCAAACAGCATGTGTCTTCAACTGGAGCAGCTATAATGAGATCATATTTGGGAAAATTCTTAGACAAATaGATGGATCTGGAGGCTATC +
Preference number: 3 (lower is better)
Translates to: IKQHVSSTGAAIMRSYLGKFLDK*MDLEAI
Trigger: GATAGCCTCCAGATCCATCAATTTGTCTAAGAATTT...TCCCAAATATGATCTCATTATAGCTGCTCCAGTTGAAGACACATGCTGTTTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp GTAATCTTCTTCTCAGAACCTCCTCATGGTACCTTCTTCATAACTGACCATATTTTATATAGCCAGAATTaGGAAAGAACCCAAATGTCC +
Preference number: 3 (lower is better)
Translates to: VIFFSEPPHGTFFITDHILYSQN*ERTQMS
Trigger: GGACATTTGGGTTCTTTCCAAATTCTGGCTATATAA...AATATGGTCAGTTATGAAGAAGGTACCATGAGGAGGTTCTGAGAAGAAGATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp TTGATCTTAGCCATTCTGAGTGGTGTGATTTGTATTTCCCTGATGACTAAGTATGTACCTTCTCCAAAATaGACTATATATTCGGTCACC +
Preference number: 3 (lower is better)
Translates to: LILAILSGVICISLMTKYVPSPK*TIYSVT
Trigger: GGTGACCGAATATATAGTCAATTTTGGAGAAGGTAC...ATACTTAGTCATCAGGGAAATACAAATCACACCACTCAGAATGGCTAAGATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGATTTACAGTATTCACATaGATTCTTCTGGAGGAAGGG +
Preference number: 3 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRFTVFT*ILLEEG
Trigger: CCCTTCCTCCAGAAGAATCAATGTGAATACTGTAAA...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCAGATGGGGGCTCATATaGATTTCTTCAATAGCAAAA +
Preference number: 3 (lower is better)
Translates to: NYLLFSRGNIEHARALPLRWGLI*ISSIAK
Trigger: TTTTGCTATTGAAGAAATCAATATGAGCCCCCATCT...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR TCA 72 bp CCTCAAATGGCCTTTAGCATGGAGAAGAATATGAATTaGTCCATTGTTATCTCCTTGTGCAATGCTCAATTA +
Preference number: 3 (lower is better)
Translates to: PQMAFSMEKNMN*SIVISLCNAQL
Trigger: TAATTGAGCATTGCACAAGGAGATAACAATGGATCAATTCATATTCTTCTCCATGCTAAAGGCCATTTGAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 72 bp AAATTCTTTAAAACCAGCTATCTCAGAATAATGGTGTaGAAAGCTGAGGGTACCATGAAAGGAGTTGAAGAG +
Preference number: 3 (lower is better)
Translates to: KFFKTSYLRIMV*KAEGTMKGVEE
Trigger: CTCTTCAACTCCTTTCATGGTACCCTCAGCTTTTCACACCATTATTCTGAGATAGCTGGTTTTAAAGAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR GCA 72 bp ATCAGCATCATGAGATATGATTTTAAATCCAAATCTTaGTTTTCACGTGTGATAGGGTATTCAGGACTGGCT +
Preference number: 3 (lower is better)
Translates to: ISIMRYDFKSKS*FSRVIGYSGLA
Trigger: AGCCAGTCCTGAATACCCTATCACACGTGAAAAGCAAGATTTGGATTTAAAATCATATCTCATGATGCTGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR GCA 72 bp ATAGCAACAGTAAATACAACTGCAAATATGGTCTGCTaGATAATGCATGTGAGAATATGTGGTTGTCCAATG +
Preference number: 3 (lower is better)
Translates to: IATVNTTANMVC*IMHVRICGCPM
Trigger: CATTGGACAACCACATATTCTCACATGCATTATGCAGCAGACCATATTTGCAGTTGTATTTACTGTTGCTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR CCA 72 bp ATGACTGAGAAAAGTGTGTCAGTTTTATTTAATTGTTaGGCCCTTGTAGAATACCTTTGGTTCAGTGGATTG +
Preference number: 3 (lower is better)
Translates to: MTEKSVSVLFNC*ALVEYLWFSGL
Trigger: CAATCCACTGAACCAAAGGTATTCTACAAGGGCCCAACAATTAAATAAAACTGACACACTTTTCTCAGTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
3UTR CCA 72 bp TCAACAAGTTGGACTCCAGAAAACCAAACAACTATATaGGGTACAGAGCTAAACAAACAATTCTCAACCAAT +
Preference number: 3 (lower is better)
Translates to: STSWTPENQTTI*GTELNKQFSTN
Trigger: ATTGGTTGAGAATTGTTTGTTTAGCTCTGTACCCCATATAGTTGTTTGGTTTTCTGGAGTCCAACTTGTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CCA 72 bp TACTGTCACCTGAATTTTTATCTTAGCCATTCTGACTaGTGTGAGGTTGTTTTGATTTGCATTTCTCTGATG +
Preference number: 3 (lower is better)
Translates to: YCHLNFYLSHSD*CEVVLICISLM
Trigger: CATCAGAGAAATGCAAATCAAAACAACCTCACACCAGTCAGAATGGCTAAGATAAAAATTCAGGTGACAGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR-3UTR CAA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGATTTTTGTTGTTAAAGTaGGGATTCTGTTCTTGCCAC +
Preference number: 3 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRFLLLK*GFCSCH
Trigger: GTGGCAAGAACAGAATCCCAACTTTAACAACAAAAA...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp CCAAATGCAAGAATAGATCAAAATGATCATCCATCATaGTCAAGTATTTTCAACCCAGAGATGCAAGAATGG +
Preference number: 3 (lower is better)
Translates to: PNARIDQNDHPS*SSIFNPEMQEW
Trigger: CCATTCTTGCATCTCTGGGTTGAAAATACTTGATCATGATGGATGATCATTTTGATCTATTCTTGCATTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 72 bp TTGCTGGATCATTCGGTAGTACTATGTCCATTTTTCTaGGGAACTACCAAACTAATTTCTAGAATGGTTGTA +
Preference number: 3 (lower is better)
Translates to: LLDHSVVLCPFF*GTTKLISRMVV
Trigger: TACAACCATTCTAGAAATTAGTTTGGTAGTTCCTCAGAAAAATGGACATAGTACTACCGAATGATCCAGCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp TTCCTTCTGGATTGGCATATTGATTATCTGGGCACTTaGAACAATAATCCATGTCTGTCATATTGGAAATCT +
Preference number: 3 (lower is better)
Translates to: FLLDWHIDYLGT*NNNPCLSYWKS
Trigger: AGATTTCCAATATGACAGACATGGATTATTGTTTCAAGTGCCCAGATAATCAATATGCCAATCCAGAAGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR GCA 72 bp CTGTTATTTTTGTTGTTAAAGTTGGGATTCTGTTCTTaGCACTGTCTTCCTTTAGGTTTGTTGGATGATTAC +
Preference number: 3 (lower is better)
Translates to: LLFLLLKLGFCS*HCLPLGLLDDY
Trigger: GTAATCATCCAACAAACCTAAAGGAAGACAGTGGCAAGAACAGAATCCCAACTTTAACAACAAAAATAACAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp GTTTTATTTAATTGTTGGGCCCTTGTAGAATACCTTTaGTTCAGTGGATTGACTTATCTAAGAGCACTTCTT +
Preference number: 3 (lower is better)
Translates to: VLFNCWALVEYL*FSGLTYLRALL
Trigger: AAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACAAGGGCCCAACAATTAAATAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
3UTR CCA 72 bp TCAGAGTCAAAGGTTGCAAACAATTTTTCAAGCAAATaGTCACAAGAAACAAGCTGGAATAGCCTTTGTAAT +
Preference number: 3 (lower is better)
Translates to: SESKVANNFSSK*SQETSWNSLCN
Trigger: ATTACAAAGGCTATTCCAGCTTGTTTCTTGTGACCATTTGCTTGAAAAATTGTTTGCAACCTTTGACTCTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CCA 72 bp AACTTGTGTCACTCATGGACATTTCAAAGTGGTTTCTaGATAACCATTTCAGCAACATTTTTCTTGAACATG +
Preference number: 3 (lower is better)
Translates to: NLCHSWTFQSGF*ITISATFFLNM
Trigger: CATGTTCAAGAAAAATGTTGCTGAAATGGTTATCCAGAAACCACTTTGAAATGTCCATGAGTGACACAAGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR CCA 72 bp ACACAGCATTGTATAGGTTATAACTTGTGTCACTCATaGACATTTCAAAGTGGTTTCTGGATAACCATTTCA +
Preference number: 3 (lower is better)
Translates to: TQHCIGYNLCHS*TFQSGFWITIS
Trigger: TGAAATGGTTATCCAGAAACCACTTTGAAATGTCCATGAGTGACACAAGTTATAACCTATACAATGCTGTGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR TCA 72 bp GGAAACAGAAAACCTAGGAAAGAAGTCAGGAGCAATTaGTGCAAGTATAATCAACAGAATAAAAGAGATAGA +
Preference number: 3 (lower is better)
Translates to: GNRKPRKEVRSN*CKYNQQNKRDR
Trigger: TCTATCTCTTTTATTCTGTTGATTATACTTGCATCAATTGCTCCTGACTTCTTTCCTAGGTTTTCTGTTTCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR TCA 72 bp TGGTCTTCCTTCTTGATTTTCTTGTGTTTTGCAAATTaGATCTTGGGTATTCTAAGTTTCTGGGCTAATATC +
Preference number: 3 (lower is better)
Translates to: WSSFLIFLCFAN*ILGILSFWANI
Trigger: GATATTAGCCCAGAAACTTAGAATACCCAAGATTCAATTTGCAAAACACAAGAAAATCAAGAAGGAAGACCA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp AAAGGAAGGAAGTATGCATACATTGGTCTTCCTTCTTaGTTTTCTTGTGTTTTGCAAATTGAATCTTGGGTA +
Preference number: 3 (lower is better)
Translates to: KGRKYAYIGLPS*FSCVLQIESWV
Trigger: TACCCAAGATTCAATTTGCAAAACACAAGAAAATCAAGAAGGAAGACCAATGTATGCATACTTCCTTCCTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp GGTGTAATTCTGATAGGCCTGCCTTTATATGTTACTTaGTCTTTTTCCCTTACTGCTTTTAGTATTCTATCT +
Preference number: 3 (lower is better)
Translates to: GVILIGLPLYVT*SFSLTAFSILS
Trigger: AGATAGAATACTAAAAGCAGTAAGGGAAAAAGATCAAGTAACATATAAAGGCAGGCCTATCAGAATTACACC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR TCA 72 bp GCCCAGTCTACCAATTCCTCATACATAAGCAATTCTTaGGGATGTGTAAAGTATTTGAAAAACTTTCCTATT +
Preference number: 3 (lower is better)
Translates to: AQSTNSSYISNS*GCVKYLKNFPI
Trigger: AATAGGAAAGTTTTTCAAATACTTTACACATCCTCAAGAATTGCTTATGTATGAGGAATTGGTAGACTGGGC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR TCA 72 bp GCAATAACTGAACCTTTGTTGCAAACAACCAAAATATaGCCATGTTCAATATGCCCATCACTATCAACAAAT +
Preference number: 3 (lower is better)
Translates to: AITEPLLQTTKI*PCSICPSLSTN
Trigger: ATTTGTTGATAGTGATGGGCATATTGAACATGGTCATATTTTGGTTGTTTGCAACAAAGGTTCAGTTATTGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR CCA 72 bp GACTTTTTGCCAGAGTCTATGAAATCTAGAAGATCCTaGGAAGAAATCATATACAGCATAAGAGAATACAAA +
Preference number: 3 (lower is better)
Translates to: DFLPESMKSRRS*EEIIYSIREYK
Trigger: TTTGTATTCTCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGGCAAAAAGTC
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp AGATGGCTCCCTGAGGTGTTCTGGCAGAGCCCTCCAGGGCAGACACCTCTCCTCCTCAGAATAATGGTGTaGAAAGCTGAGGGTACCATG +
Preference number: 4 (lower is better)
Translates to: RWLPEVFWQSPPGQTPLLLRIMV*KAEGTM
Trigger: CATGGTACCCTCAGCTTTTCACACCATTATTCTGAG...GAGGAGAGGTGTCTGCCCTGGAGGGCTCTGCCAGAACACCTCAGGGAGCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp ACAAGATGGCTCCCTGAGGTGTTCTGGCAGAGCCCTCCAGGGCAGACACCTCTCAAGCTGAGGGTACCATaGAAGGAGTTGAAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: TRWLPEVFWQSPPGQTPLKLRVP*KELKRN
Trigger: ATTCCTCTTCAACTCCTTTCATGGTACCCTCAGCTT...GAGAGGTGTCTGCCCTGGAGGGCTCTGCCAGAACACCTCAGGGAGCCATCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp AGATGGCTCCCTGAGGTGTTCTGGCAGAGCCCTCCAGGGCAGACACCTCTCCTCACTATCAACAAATGGTaGAGAAGTTCCCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: RWLPEVFWQSPPGQTPLLTINKW*RSSQPD
Trigger: ATCTGGCTGGGAACTTCTCCACCATTTGTTGATAGT...GAGGAGAGGTGTCTGCCCTGGAGGGCTCTGCCAGAACACCTCAGGGAGCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 72 bp TTGATTCTTCTGGAGGAAGGGCCTCTTCTGACATGGTaGTCTTTCCTTTTGGGGGTGGGCCTGGTGTGCCAC +
Preference number: 4 (lower is better)
Translates to: LILLEEGPLLTW*SFLLGVGLVCH
Trigger: GTGGCACACCAGGCCCACCCCCAAAAGGAAAGACAACCATGTCAGAAGAGGCCCTTCCTCCAGAAGAATCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp ATGCCCGAATCCACAGGATCACAGGATGTCAGGATCTaGGTGACACCAGGATCTCAGTGTTCCAGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: MPESTGSQDVRI*VTPGSQCSRGS
Trigger: GCTGCCTCTGGAACACTGAGATCCTGGTGTCACCAAGATCCTGACATCCTGTGATCCTGTGGATTCGGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp ACAAGATGGCTCCCTGAGGTGTTCTGGCAGAGCCCTCCAGGGCAGACACCTCTCGGAAATCTCATTCTCTaGGCAGGGGATACAATCAAA +
Preference number: 4 (lower is better)
Translates to: TRWLPEVFWQSPPGQTPLGNLIL*AGDTIK
Trigger: TTTGATTGTATCCCCTGCCCAGAGAATGAGATTTCC...GAGAGGTGTCTGCCCTGGAGGGCTCTGCCAGAACACCTCAGGGAGCCATCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp CTTGTTGGCATCCACAATAGTGTCTGGTATTGGTGGTaGTTCATGGGATGGATCCCCAGGTGGGGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: LVGIHNSVWYWW*FMGWIPRWGSL
Trigger: GAGACTGCCCCACCTGGGGATCCATCCCATGAACAACCACCAATACCAGACACTATTGTGGATGCCAACAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp CCCTGCCCTGCTTCCCTACCCACCCACTTCCAATTCTaGGCTATGGCATTCCTCTACACTCGGGCATATAAA +
Preference number: 4 (lower is better)
Translates to: PCPASLPTHFQF*AMAFLYTRAYK
Trigger: TTTATATGCCCGAGTGTAGAGGAATGCCATAGCCAAGAATTGGAAGTGGGTGGGTAGGGAAGCAGGGCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp ACAAGATGGCTCCCTGAGGTGTTCTGGCAGAGCCCTCCAGGGCAGACACCTCTCAAGAGCAGAAAAGCATaGAAGCCTTTAAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: TRWLPEVFWQSPPGQTPLKSRKA*KPLRPR
Trigger: TCTTGGTCTTAAAGGCTTCCATGCTTTTCTGCTCTT...GAGAGGTGTCTGCCCTGGAGGGCTCTGCCAGAACACCTCAGGGAGCCATCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp ACAAGATGGCTCCCTGAGGTGTTCTGGCAGAGCCCTCCAGGGCAGACACCTCTCGAAATATTCCTGCAGTaGAGGTTAAGATGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: TRWLPEVFWQSPPGQTPLEIFLQ*RLRCRK
Trigger: TTTTCTGCATCTTAACCTCCACTGCAGGAATATTTC...GAGAGGTGTCTGCCCTGGAGGGCTCTGCCAGAACACCTCAGGGAGCCATCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp CAGGATGTCAGGATCTTGGTGACACCAGGATCTCAGTGTTCCAGAGGCAGCTTGGGAATGTCACAATTTTaGAGAGACAGTGCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: QDVRILVTPGSQCSRGSLGMSQF*RDSAFL
Trigger: AAGGAACGCACTGTCTCTCCAAAATTGTGACATTCC...CAAGCTGCCTCTGGAACACTGAGATCCTGGTGTCACCAAGATCCTGACATCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 72 bp GTGCACCACCACTACGGGGCTGGGACCTGTGTTCTTTaGTTGAATCAGGGTGTCACAGATTGCTTTAAGATT +
Preference number: 4 (lower is better)
Translates to: VHHHYGAGTCVL*LNQGVTDCFKI
Trigger: AATCTTAAAGCAATCTGTGACACCCTGATTCAACAAAAGAACACAGGTCCCAGCCCCGTAGTGGTGGTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp GTTCTACCTGTAGGGTTACAGACCCCTTCAGCTTCTTaGGTAATTTCTCTAGTTCCTCCACTGAGGGACCCT +
Preference number: 4 (lower is better)
Translates to: VLPVGLQTPSAS*VISLVPPLRDP
Trigger: AGGGTCCCTCAGTGGAGGAACTAGAGAAATTACCAAAGAAGCTGAAGGGGTCTGTAACCCTACAGGTAGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp CGCCCAAGATTTCAGGTTCACAGGATATCAGAATCACAGGATCACAGAGACAGGACAGCCTTTCCCTCCTaGGGGGATTTTCTAAATCCT +
Preference number: 4 (lower is better)
Translates to: RPRFQVHRISESQDHRDRTAFPS*GDFLNP
Trigger: AGGATTTAGAAAATCCCCTCAGGAGGGAAAGGCTGT...CCTGTCTCTGTGATCCTGTGATTCTGATATCCTGTGAACCTGAAATCTTGGGCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp TGCACCATTTGCGTGGAAAATTGCTTCCCAGCCTTTCACTCTGAGGTAGTGTCTACAGCCTTTCCCTCCTaGGGGGATTTTCTAAATCCT +
Preference number: 4 (lower is better)
Translates to: CTICVENCFPAFHSEVVSTAFPS*GDFLNP
Trigger: AGGATTTAGAAAATCCCCTCAGGAGGGAAAGGCTGT...AGACACTACCTCAGAGTGAAAGGCTGGGAAGCAATTTTCCACGCAAATGGTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR GCA 90 bp CTTTGTCAGCAGACCTGGGATTCTAGCTCTATCCTGAGTCTCAGTGGTCAGAGTAGGGAAGAGAGCACCTaGAAAGAATCAAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: LCQQTWDSSSILSLSGQSREEST*KESNSS
Trigger: ACTGGAGTTTGATTCTTTGCAGGTGCTCTCTTCCCT...ACTCTGACCACTGAGACTCAGGATAGAGCTAGAATCCCAGGTCTGCTGACAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp TCTCTGGTTGGAGATGTTCCTCCTGTGATTCTGTTAGCCTTTGTCAGCAGACCTTCACCTCTGGAGTTCTaGAGATGTACAGAAGTGGTC +
Preference number: 4 (lower is better)
Translates to: SLVGDVPPVILLAFVSRPSPLEF*RCTEVV
Trigger: GACCACTTCTGTACATCTCCAGAACTCCAGAGGTGA...AGGTCTGCTGACAAAGGCTAACAGAATCACAGGAGGAACATCTCCAACCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp TCTCTGGTTGGAGATGTTCCTCCTGTGATTCTGTTAGCCTTTGTCAGCAGACCTAAGCTGAGGGTACCATaGAAGGAGTTGAAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: SLVGDVPPVILLAFVSRPKLRVP*KELKRN
Trigger: ATTCCTCTTCAACTCCTTTCATGGTACCCTCAGCTT...AGGTCTGCTGACAAAGGCTAACAGAATCACAGGAGGAACATCTCCAACCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp CGCCCAAGATTTCAGGTTCACAGGATATCAGAATCACAGGATCACAGAGACAGGAATGGTGTGAAAAGCTaGGGGTACCATGAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: RPRFQVHRISESQDHRDRNGVKS*GYHERS
Trigger: ACTCCTTTCATGGTACCCTCAGCTTTTCACACCATT...CCTGTCTCTGTGATCCTGTGATTCTGATATCCTGTGAACCTGAAATCTTGGGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp GACCTATCCCAGAATCGGGATCTATTCTGTGGAATAGAAGCAATCTGTCAGCTTAAGCCTCCTCACCTCTaGAGTTCTGGAGATGTACAG +
Preference number: 4 (lower is better)
Translates to: DLSQNRDLFCGIEAICQLKPPHL*SSGDVQ
Trigger: CTGTACATCTCCAGAACTCCAGAGGTGAGGAGGCTT...AAGCTGACAGATTGCTTCTATTCCACAGAATAGATCCCGATTCTGGGATAGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp TATTCAGGACTGGCTGAGGTGGGAGTGCTGAGTTCTGATGATGTTGAGTGGTCTGGAAATCTCATTCTCTaGGCAGGGGATACAATCAAA +
Preference number: 4 (lower is better)
Translates to: YSGLAEVGVLSSDDVEWSGNLIL*AGDTIK
Trigger: TTTGATTGTATCCCCTGCCCAGAGAATGAGATTTCC...AGACCACTCAACATCATCAGAACTCAGCACTCCCACCTCAGCCAGTCCTGAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp AAGGACAGGCTCCAGTCTGATATAGCAAGGGCAGGTAGCACTGGAGAAAATCAAGCGTTCCTTCTGGATTaGCATATTGATTATCTGGGC +
Preference number: 4 (lower is better)
Translates to: KDRLQSDIARAGSTGENQAFLLD*HIDYLG
Trigger: GCCCAGATAATCAATATGCCAATCCAGAAGGAACGC...TTGATTTTCTCCAGTGCTACCTGCCCTTGCTATATCAGACTGGAGCCTGTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 72 bp ATAGAAGCAATCTGTCAGCTTCTACTAAGACCTGGGTaGGACTGGATCTCTCCATCTCCAACTCAAGGAGGT +
Preference number: 4 (lower is better)
Translates to: IEAICQLLLRPG*DWISPSPTQGG
Trigger: ACCTCCTTGAGTTGGAGATGGAGAGATCCAGTCCAACCCAGGTCTTAGTAGAAGCTGACAGATTGCTTCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 72 bp GGAGCAGCTATAATGAGATCATATTTGGGATTAGGCTaGCCTGTACTCACCCAGAACTTCATGCAGTGCCTC +
Preference number: 4 (lower is better)
Translates to: GAAIMRSYLGLG*PVLTQNFMQCL
Trigger: GAGGCACTGCATGAAGTTCTGGGTGAGTACAGGCAAGCCTAATCCCAAATATGATCTCATTATAGCTGCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp ATATCTGGCATTTGGACCTGCCTACTAGCTGAAGATGAAGACCCAAAACAGGGACTCAGAATAATGGTGTaGAAAGCTGAGGGTACCATG +
Preference number: 4 (lower is better)
Translates to: ISGIWTCLLAEDEDPKQGLRIMV*KAEGTM
Trigger: CATGGTACCCTCAGCTTTTCACACCATTATTCTGAG...TCCCTGTTTTGGGTCTTCATCTTCAGCTAGTAGGCAGGTCCAAATGCCAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp CTTTGTCAGCAGACCTGGGATTCTAGCTCTATCCTGAGTCTCAGTGGTCAGAGTGATTATCTGGGCACTTaGAACAATAATCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: LCQQTWDSSSILSLSGQSDYLGT*NNNPCL
Trigger: CAGACATGGATTATTGTTTCAAGTGCCCAGATAATC...ACTCTGACCACTGAGACTCAGGATAGAGCTAGAATCCCAGGTCTGCTGACAAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR GCA 90 bp TTTCAGGTTCACAGGATATCAGAATCACAGGATCACAGAGACAGGTGCACTCTGATTTTGGAGAGACAGTaGGTTCCTTCTGGATTGGCA +
Preference number: 4 (lower is better)
Translates to: FQVHRISESQDHRDRCTLILERQ*VPSGLA
Trigger: TGCCAATCCAGAAGGAACGCACTGTCTCTCCAAAAT...CAGAGTGCACCTGTCTCTGTGATCCTGTGATTCTGATATCCTGTGAACCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR GCA 90 bp TTTCAGGTTCACAGGATATCAGAATCACAGGATCACAGAGACAGGTGCACTCTGCAGTGGAGGTTAAGATaGAGAAAACCTCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: FQVHRISESQDHRDRCTLQWRLR*RKPPLQ
Trigger: TTGCAGTGGAGGTTTTCTGCATCTTAACCTCCACTG...CAGAGTGCACCTGTCTCTGTGATCCTGTGATTCTGATATCCTGTGAACCTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 72 bp GACCACAAAATAAACCCACTATTCTGCTGTGATGACTaGTATGGGCTTGGCCCAGTGAGTAGCAATATTGGG +
Preference number: 4 (lower is better)
Translates to: DHKINPLFCCDD*YGLGPVSSNIG
Trigger: CCCAATATTGCTACTCACTGGGCCAAGCCCATACAAGTCATCACAGCAGAATAGTGGGTTTATTTTGTGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 72 bp AGGAGACAGCTATATCAGGCTCTTTTCAGCAAGCTCTaGTTGGCATCCACAATAGTGTCTGGTATTGGTGGT +
Preference number: 4 (lower is better)
Translates to: RRQLYQALFSKL*LASTIVSGIGG
Trigger: ACCACCAATACCAGACACTATTGTGGATGCCAACAAGAGCTTGCTGAAAAGAGCCTGATATAGCTGTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp AACACTTGGGTACCAGATCTCTCCTTCCAAGTAGCCACCAGTAGCTCTATGGCACAGCAACATTTTTCTTaGACATGTCTTGAGACTCTT +
Preference number: 4 (lower is better)
Translates to: NTWVPDLSFQVATSSSMAQQHFS*TCLETL
Trigger: AAGAGTCTCAAGACATGTTCAAGAAAAATGTTGCTG...TGCCATAGAGCTACTGGTGGCTACTTGGAAGGAGAGATCTGGTACCCAAGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp ACTCCTATTATCCATAGGTTTAGTCTTCTCATTGTGTCCTGGATTTCCTGGATGCTCGGTTATTGGCCTTaGCAATGGGAGTGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: TPIIHRFSLLIVSWISWMLGYWP*QWECLG
Trigger: ACCAAGACACTCCCATTGTCAAGGCCAATAACCGAG...CATCCAGGAAATCCAGGACACAATGAGAAGACTAAACCTATGGATAATAGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp CTTTGTCAGCAGACCTGGGATTCTAGCTCTATCCTGAGTCTCAGTGGTCAGAGTTTCTCAAAAAGCACTTaGGTTCATTCAAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LCQQTWDSSSILSLSGQSFSKST*VHSKSR
Trigger: TCTGCTCTTTGAATGAACCCAAGTGCTTTTTGAGAA...ACTCTGACCACTGAGACTCAGGATAGAGCTAGAATCCCAGGTCTGCTGACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp CTTTGTCAGCAGACCTGGGATTCTAGCTCTATCCTGAGTCTCAGTGGTCAGAGTAACTTGTGTCACTCATaGACATTTCAAAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LCQQTWDSSSILSLSGQSNLCHS*TFQSGF
Trigger: GAAACCACTTTGAAATGTCCATGAGTGACACAAGTT...ACTCTGACCACTGAGACTCAGGATAGAGCTAGAATCCCAGGTCTGCTGACAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp TCTCTGGTTGGAGATGTTCCTCCTGTGATTCTGTTAGCCTTTGTCAGCAGACCTGCAGGATTTACAAAATaGATGTTCTTCAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SLVGDVPPVILLAFVSRPAGFTK*MFFREE
Trigger: CTCTTCCCTGAAGAACATCCATTTTGTAAATCCTGC...AGGTCTGCTGACAAAGGCTAACAGAATCACAGGAGGAACATCTCCAACCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp TGCACCATTTGCGTGGAAAATTGCTTCCCAGCCTTTCACTCTGAGGTAGTGTCTGCAGGATTTACAAAATaGATGTTCTTCAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: CTICVENCFPAFHSEVVSAGFTK*MFFREE
Trigger: CTCTTCCCTGAAGAACATCCATTTTGTAAATCCTGC...AGACACTACCTCAGAGTGAAAGGCTGGGAAGCAATTTTCCACGCAAATGGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTCACCCTCCTCACCTCTaGAGTTCTGGAGATGTACAG +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACHPPHL*SSGDVQ
Trigger: CTGTACATCTCCAGAACTCCAGAGGTGAGGAGGGTG...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232799.2
3UTR CAA 72 bp CTCCATCTCCAACTCAAGGAGGTTTGGGAGTATCCTTaGAATGAACCCTGTTTAGGAACAAGTTGTCAGTAC +
Preference number: 4 (lower is better)
Translates to: LHLQLKEVWEYP*NEPCLGTSCQY
Trigger: GTACTGACAACTTGTTCCTAAACAGGGTTCATTCAAAGGATACTCCCAAACCTCCTTGAGTTGGAGATGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 72 bp AGACAGCTATATCAGGCTCTTTTCAGCAAGCTCTTGTaGGCATCCACAATAGTGTCTGGTATTGGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: RQLYQALFSKLL*ASTIVSGIGGC
Trigger: ACAACCACCAATACCAGACACTATTGTGGATGCCAACAAGAGCTTGCTGAAAAGAGCCTGATATAGCTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp GATGGTACATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAATTCCTTCCATAGTGTTCAAAGCTACTaGGAAGAGGGTGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: DGTSFCLSSKLCLCNSFHSVQSY*EEGEMG
Trigger: GCCCATTTCACCCTCTTCTCAGTAGCTTTGAACACT...ATGGAAGGAATTACAGAGACAAAGTTTGGAGCTGAGACAAAAGGATGTACCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp AGCAACAAAATGTTGGGTCCTGTTGGTGTAGCCAGTCTATTAGTCTATGTCTTTCAAATACAGCAGCTGTaGGAGCAGAAAACCCTAGTG +
Preference number: 4 (lower is better)
Translates to: SNKMLGPVGVASLLVYVFQIQQL*EQKTLV
Trigger: CACTAGGGTTTTCTGCTCTCACAGCTGCTGTATTTG...AAAGACATAGACTAATAGACTGGCTACACCAACAGGACCCAACATTTTGTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCTCGGTTATTGGCCTTaGCAATGGGAGTGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYLGYWP*QWECLG
Trigger: ACCAAGACACTCCCATTGTCAAGGCCAATAACCGAG...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCCTCGGTTATTGGCCTTaGCAATGGGAGTGTCTTGGT +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLLGYWP*QWECLG
Trigger: ACCAAGACACTCCCATTGTCAAGGCCAATAACCGAG...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp AAGGACAGGCTCCAGTCTGATATAGCAAGGGCAGGTAGCACTGGAGAAAATCAACAAACAACCAAAATATaGCCATGTTCAATATGCCCA +
Preference number: 4 (lower is better)
Translates to: KDRLQSDIARAGSTGENQQTTKI*PCSICP
Trigger: TGGGCATATTGAACATGGTCATATTTTGGTTGTTTG...TTGATTTTCTCCAGTGCTACCTGCCCTTGCTATATCAGACTGGAGCCTGTCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR GCA 90 bp CTTTGTCAGCAGACCTGGGATTCTAGCTCTATCCTGAGTCTCAGTGGTCAGAGTAATGTATTTGCTTGCTaGAGAAGTAACTCATTGAGT +
Preference number: 4 (lower is better)
Translates to: LCQQTWDSSSILSLSGQSNVFAC*RSNSLS
Trigger: ACTCAATGAGTTACTTCTGCAGCAAGCAAATACATT...ACTCTGACCACTGAGACTCAGGATAGAGCTAGAATCCCAGGTCTGCTGACAAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp CCCTACCTCAGAGTCAAAGGTTGCAAACAATTTTTCAAGCAAATGGTCACAAGATCACCTCTGGAGTTCTaGAGATGTACAGAAGTGGTC +
Preference number: 4 (lower is better)
Translates to: PYLRVKGCKQFFKQMVTRSPLEF*RCTEVV
Trigger: GACCACTTCTGTACATCTCCAGAACTCCAGAGGTGA...TCTTGTGACCATTTGCTTGAAAAATTGTTTGCAACCTTTGACTCTGAGGTAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAAAGCCTCCTCACCTCTaGAGTTCTGGAGATGTACAG +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSAKPPHL*SSGDVQ
Trigger: CTGTACATCTCCAGAACTCCAGAGGTGAGGAGGCTT...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233317.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACACTCCTCCTCACCTCTaGAGTTCTGGAGATGTACAG +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYTPPHL*SSGDVQ
Trigger: CTGTACATCTCCAGAACTCCAGAGGTGAGGAGGAGT...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233744.2
3UTR CAA 72 bp GTTTTTCCAATGGCCCATTTCTTTACAGTATTCACATaGATTCTTCTGGAGGAAGGGCCTCTTCTGACATGG +
Preference number: 4 (lower is better)
Translates to: VFPMAHFFTVFT*ILLEEGPLLTW
Trigger: CCATGTCAGAAGAGGCCCTTCCTCCAGAAGAATCAATGTGAATACTGTAAAGAAATGGGCCATTGGAAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp TGTAAATGTACCACATTTTCTGTGTCTATTCCTCTGTaGAGGGACATCTGGGTTCTTTCCAGCTTCTGGCTA +
Preference number: 4 (lower is better)
Translates to: CKCTTFSVSIPL*RDIWVLSSFWL
Trigger: TAGCCAGAAGCTGGAAAGAACCCAGATGTCCCTCAACAGAGGAATAGACACAGAAAATGTGGTACATTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp GAGAGAGAGAGAGAGAGAGAGAGAGAGATAGATCAATaGAGCCTATCACTAGATGGGTTTTGTGCAGAATTC +
Preference number: 4 (lower is better)
Translates to: EREREREREIDQ*SLSLDGFCAEF
Trigger: GAATTCTGCACAAAACCCATCTAGTGATAGGCTCAATTGATCTATCTCTCTCTCTCTCTCTCTCTCTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTAGTGTTCAAAGCTACTaGGAAGAGGGTGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACSVQSY*EEGEMG
Trigger: GCCCATTTCACCCTCTTCTCAGTAGCTTTGAACACT...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233317.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp GATGGTACATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAATTCCTTCCATAATGGTGTGAAAAGCTaGGGGTACCATGAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: DGTSFCLSSKLCLCNSFHNGVKS*GYHERS
Trigger: ACTCCTTTCATGGTACCCTCAGCTTTTCACACCATT...ATGGAAGGAATTACAGAGACAAAGTTTGGAGCTGAGACAAAAGGATGTACCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACACAGCCTTTCCCTCCTaGGGGGATTTTCTAAATCCT +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYTAFPS*GDFLNP
Trigger: AGGATTTAGAAAATCCCCTCAGGAGGGAAAGGCTGT...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCACAGCCTTTCCCTCCTaGGGGGATTTTCTAAATCCT +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLTAFPS*GDFLNP
Trigger: AGGATTTAGAAAATCCCCTCAGGAGGGAAAGGCTGT...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTACAGCCTTTCCCTCCTaGGGGGATTTTCTAAATCCT +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACTAFPS*GDFLNP
Trigger: AGGATTTAGAAAATCCCCTCAGGAGGGAAAGGCTGT...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCACAAATACAGCAGCTGTaGGAGCAGAAAACCCTAGTG +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSAQIQQL*EQKTLV
Trigger: CACTAGGGTTTTCTGCTCTCACAGCTGCTGTATTTG...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTCAAATACAGCAGCTGTaGGAGCAGAAAACCCTAGTG +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACQIQQL*EQKTLV
Trigger: CACTAGGGTTTTCTGCTCTCACAGCTGCTGTATTTG...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp ACTCCAGCTTGTATCTTTGCACCATTTGCGTGGAAAATTGCTTCCCAGCCTTTCTATGTGGTTGTCCAATaGATAGCAGAGAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: TPACIFAPFAWKIASQPFYVVVQ*IAENKE
Trigger: TTCTTTGTTCTCTGCTATTCATTGGACAACCACATA...GAAAGGCTGGGAAGCAATTTTCCACGCAAATGGTGCAAAGATACAAGCTGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTAGACAGGAAGGAAAGTaGGCCAGACACTACAGAACA +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACRQEGK*ARHYRT
Trigger: TGTTCTGTAGTGTCTGGCTCACTTTCCTTCCTGTCT...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAAGACAGGAAGGAAAGTaGGCCAGACACTACAGAACA +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSARQEGK*ARHYRT
Trigger: TGTTCTGTAGTGTCTGGCTCACTTTCCTTCCTGTCT...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCTTCTTGAACATGTCTTaGGACTCCTCCTCACCTCTG +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLFLNMS*DSSSPL
Trigger: CAGAGGTGAGGAGGAGTCTCAAGACATGTTCAAGAA...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233744.2
CDS-3UTR GCA 90 bp TCTCTGGTTGGAGATGTTCCTCCTGTGATTCTGTTAGCCTTTGTCAGCAGACCTAATGTATTTGCTTGCTaGAGAAGTAACTCATTGAGT +
Preference number: 4 (lower is better)
Translates to: SLVGDVPPVILLAFVSRPNVFAC*RSNSLS
Trigger: ACTCAATGAGTTACTTCTGCAGCAAGCAAATACATT...AGGTCTGCTGACAAAGGCTAACAGAATCACAGGAGGAACATCTCCAACCAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATCACCTCTGGAGTTCTaGAGATGTACAGAAGTGGTC +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSASPLEF*RCTEVV
Trigger: GACCACTTCTGTACATCTCCAGAACTCCAGAGGTGA...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp GCTGTGCTAAGATTAAAACACATATCTCTGAGTGCCTCCAAAATGAAACATGGATCACCTCTGGAGTTCTaGAGATGTACAGAAGTGGTC +
Preference number: 4 (lower is better)
Translates to: AVLRLKHISLSASKMKHGSPLEF*RCTEVV
Trigger: GACCACTTCTGTACATCTCCAGAACTCCAGAGGTGA...TCCATGTTTCATTTTGGAGGCACTCAGAGATATGTGTTTTAATCTTAGCACAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACTCACCTCTGGAGTTCTaGAGATGTACAGAAGTGGTC +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYSPLEF*RCTEVV
Trigger: GACCACTTCTGTACATCTCCAGAACTCCAGAGGTGA...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGAAAGCCTCCTCACCTCTaGAGTTCTGGAGATGTACAG +
Preference number: 4 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRKPPHL*SSGDVQ
Trigger: CTGTACATCTCCAGAACTCCAGAGGTGAGGAGGCTT...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp AAGGACAGGCTCCAGTCTGATATAGCAAGGGCAGGTAGCACTGGAGAAAATCAAATGGACATTTCAAAGTaGTTTCTGGATAACCATTTC +
Preference number: 4 (lower is better)
Translates to: KDRLQSDIARAGSTGENQMDISK*FLDNHF
Trigger: GAAATGGTTATCCAGAAACCACTTTGAAATGTCCAT...TTGATTTTCTCCAGTGCTACCTGCCCTTGCTATATCAGACTGGAGCCTGTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp TGTTGGGCCCTTGTAGAATACCTTTGGTTCAGTGGATaGACTTATCTAAGAGCACTTCTTCAGCATGTACTT +
Preference number: 4 (lower is better)
Translates to: CWALVEYLWFSG*TYLRALLQHVL
Trigger: AAGTACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACAAGGGCCCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
3UTR CAA 72 bp CCGCTCTGGAAATCAGTTTGGCGATTCCTCAGAAAATaGGGCAAAGTTTTACTGAAAGATCCAGAAATAGCA +
Preference number: 4 (lower is better)
Translates to: PLWKSVWRFLRK*GKVLLKDPEIA
Trigger: TGCTATTTCTGGATCTTTCAGTAAAACTTTGCCCAATTTTCTGAGGAATCGCCAAACTGATTTCCAGAGCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 72 bp CTTCTGCACCTGAGAATATCTTCCATCTCTTGTATTTaGTTGCTGATGCTCGCATCTATGGTTCCAGATTTC +
Preference number: 4 (lower is better)
Translates to: LLHLRISSISCI*LLMLASMVPDF
Trigger: GAAATCTGGAACCATAGATGCGAGCATCAGCAACAAAATACAAGAGATGGAAGATATTCTCAGGTGCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp ATGGAATCTTCTGCACCTGAGAATATCTTCCATCTCTaGTATTTTGTTGCTGATGCTCGCATCTATGGTTCC +
Preference number: 4 (lower is better)
Translates to: MESSAPENIFHL*YFVADARIYGS
Trigger: GGAACCATAGATGCGAGCATCAGCAACAAAATACAAGAGATGGAAGATATTCTCAGGTGCAGAAGATTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp GATGGTACATCCTTTTGTCTCAGCTCCAAACTTTGTCTCTGTAATTCCTTCCATTTCTTGAGGATAAACTaGCTTTACTCCCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: DGTSFCLSSKLCLCNSFHFLRIN*LYSHQP
Trigger: TGGCTGATGGGAGTAAAGTCAGTTTATCCTCAAGAA...ATGGAAGGAATTACAGAGACAAAGTTTGGAGCTGAGACAAAAGGATGTACCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp TTGATCTTAGCCATTCTGAGTGGTGTGATTTGTATTTCCCTGATGACTAAGTATAGTGTTCAAAGCTACTaGGAAGAGGGTGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: LILAILSGVICISLMTKYSVQSY*EEGEMG
Trigger: GCCCATTTCACCCTCTTCTCAGTAGCTTTGAACACT...ATACTTAGTCATCAGGGAAATACAAATCACACCACTCAGAATGGCTAAGATCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp ATTAAAACACATATCTCTGAGTGCCTCCAAAATGAAACATGGAGAGAGAGCATAAGTGTTCAAAGCTACTaGGAAGAGGGTGAAATGGGC +
Preference number: 4 (lower is better)
Translates to: IKTHISECLQNETWRESISVQSY*EEGEMG
Trigger: GCCCATTTCACCCTCTTCTCAGTAGCTTTGAACACT...TATGCTCTCTCTCCATGTTTCATTTTGGAGGCACTCAGAGATATGTGTTTTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp ATCAAACAGCATGTGTCTTCAACTGGAGCAGCTATAATGAGATCATATTTGGGAAAGCTGAGGGTACCATaGAAGGAGTTGAAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: IKQHVSSTGAAIMRSYLGKLRVP*KELKRN
Trigger: ATTCCTCTTCAACTCCTTTCATGGTACCCTCAGCTT...TCCCAAATATGATCTCATTATAGCTGCTCCAGTTGAAGACACATGCTGTTTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTAAGCTGAGGGTACCATaGAAGGAGTTGAAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACKLRVP*KELKRN
Trigger: ATTCCTCTTCAACTCCTTTCATGGTACCCTCAGCTT...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233317.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp GATTTTAAATCCAAATCTTGCTTTTCACGTGTGATAGGGTATTCAGGACTGGCTAATGGTGTGAAAAGCTaGGGGTACCATGAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: DFKSKSCFSRVIGYSGLANGVKS*GYHERS
Trigger: ACTCCTTTCATGGTACCCTCAGCTTTTCACACCATT...AGCCAGTCCTGAATACCCTATCACACGTGAAAAGCAAGATTTGGATTTAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAAATGGTGTGAAAAGCTaGGGGTACCATGAAAGGAGT +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSANGVKS*GYHERS
Trigger: ACTCCTTTCATGGTACCCTCAGCTTTTCACACCATT...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233317.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp TTCTTCTCAGAACCTCCTCATGGTACCTTCTTCATAACTGACCATATTATTGGTCTCAGAATAATGGTGTaGAAAGCTGAGGGTACCATG +
Preference number: 4 (lower is better)
Translates to: FFSEPPHGTFFITDHIIGLRIMV*KAEGTM
Trigger: CATGGTACCCTCAGCTTTTCACACCATTATTCTGAG...ACCAATAATATGGTCAGTTATGAAGAAGGTACCATGAGGAGGTTCTGAGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCTCAGAATAATGGTGTaGAAAGCTGAGGGTACCATG +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYLRIMV*KAEGTM
Trigger: CATGGTACCCTCAGCTTTTCACACCATTATTCTGAG...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233317.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp TTGATCTTAGCCATTCTGAGTGGTGTGATTTGTATTTCCCTGATGACTAAGTATACAGCCTTTCCCTCCTaGGGGGATTTTCTAAATCCT +
Preference number: 4 (lower is better)
Translates to: LILAILSGVICISLMTKYTAFPS*GDFLNP
Trigger: AGGATTTAGAAAATCCCCTCAGGAGGGAAAGGCTGT...ATACTTAGTCATCAGGGAAATACAAATCACACCACTCAGAATGGCTAAGATCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR GCA 90 bp GTGGAGCATGTGCCCTTATTACCATTTGGAACATATTCTGGATATTTGCCCAGGGACAATGTATTTGCTTaGTGCAGAAGTAACTCATTG +
Preference number: 4 (lower is better)
Translates to: VEHVPLLPFGTYSGYLPRDNVFA*CRSNSL
Trigger: CAATGAGTTACTTCTGCAGCAAGCAAATACATTGTC...CCTGGGCAAATATCCAGAATATGTTCCAAATGGTAATAAGGGCACATGCTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR GCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACAGGGAAGAGAGCACCTaGAAAGAATCAAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYREEST*KESNSS
Trigger: ACTGGAGTTTGATTCTTTGCAGGTGCTCTCTTCCCT...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCAGGGAAGAGAGCACCTaGAAAGAATCAAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLREEST*KESNSS
Trigger: ACTGGAGTTTGATTCTTTGCAGGTGCTCTCTTCCCT...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACATTTTGGAGAGACAGTaGGTTCCTTCTGGATTGGCA +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYILERQ*VPSGLA
Trigger: TGCCAATCCAGAAGGAACGCACTGTCTCTCCAAAAT...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTATTTTGGAGAGACAGTaGGTTCCTTCTGGATTGGCA +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACILERQ*VPSGLA
Trigger: TGCCAATCCAGAAGGAACGCACTGTCTCTCCAAAAT...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACAGGCCTTTCCATTGGTaGTATGATAGACAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYRPFHW*YDRQEG
Trigger: TCCTTCCTGTCTATCATAGCACCAATGGAAAGGCCT...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp GTAATCTTCTTCTCAGAACCTCCTCATGGTACCTTCTTCATAACTGACCATATTAGGCCTTTCCATTGGTaGTATGATAGACAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: VIFFSEPPHGTFFITDHIRPFHW*YDRQEG
Trigger: TCCTTCCTGTCTATCATAGCACCAATGGAAAGGCCT...AATATGGTCAGTTATGAAGAAGGTACCATGAGGAGGTTCTGAGAAGAAGATTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR GCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCAGGCCTTTCCATTGGTaGTATGATAGACAGGAAGGA +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLRPFHW*YDRQEG
Trigger: TCCTTCCTGTCTATCATAGCACCAATGGAAAGGCCT...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCAGTGGAGGTTAAGATaGAGAAAACCTCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYQWRLR*RKPPLQ
Trigger: TTGCAGTGGAGGTTTTCTGCATCTTAACCTCCACTG...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCACAGTGGAGGTTAAGATaGAGAAAACCTCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSAQWRLR*RKPPLQ
Trigger: TTGCAGTGGAGGTTTTCTGCATCTTAACCTCCACTG...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTCAGTGGAGGTTAAGATaGAGAAAACCTCCACTGCAA +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACQWRLR*RKPPLQ
Trigger: TTGCAGTGGAGGTTTTCTGCATCTTAACCTCCACTG...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp TTGATATGTAACAGGAACCAACATTTTGCTGCATATTGGAAACATACTTCAGTGAAGCCTCCTCACCTCTaGAGTTCTGGAGATGTACAG +
Preference number: 4 (lower is better)
Translates to: LICNRNQHFAAYWKHTSVKPPHL*SSGDVQ
Trigger: CTGTACATCTCCAGAACTCCAGAGGTGAGGAGGCTT...CACTGAAGTATGTTTCCAATATGCAGCAAAATGTTGGTTCCTGTTACATATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp ATATCTGGCATTTGGACCTGCCTACTAGCTGAAGATGAAGACCCAAAACAGGGAATGGACATTTCAAAGTaGTTTCTGGATAACCATTTC +
Preference number: 4 (lower is better)
Translates to: ISGIWTCLLAEDEDPKQGMDISK*FLDNHF
Trigger: GAAATGGTTATCCAGAAACCACTTTGAAATGTCCAT...TCCCTGTTTTGGGTCTTCATCTTCAGCTAGTAGGCAGGTCCAAATGCCAGATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp GTGGAGCATGTGCCCTTATTACCATTTGGAACATATTCTGGATATTTGCCCAGGGGATTTTCTAAATCCTaGATGACAAGGTATACTGCA +
Preference number: 4 (lower is better)
Translates to: VEHVPLLPFGTYSGYLPRGFSKS*MTRYTA
Trigger: TGCAGTATACCTTGTCATCCAGGATTTAGAAAATCC...CCTGGGCAAATATCCAGAATATGTTCCAAATGGTAATAAGGGCACATGCTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp AGCAACAAAATGTTGGGTCCTGTTGGTGTAGCCAGTCTATTAGTCTATGTCTTTGGAAATCTCATTCTCTaGGCAGGGGATACAATCAAA +
Preference number: 4 (lower is better)
Translates to: SNKMLGPVGVASLLVYVFGNLIL*AGDTIK
Trigger: TTTGATTGTATCCCCTGCCCAGAGAATGAGATTTCC...AAAGACATAGACTAATAGACTGGCTACACCAACAGGACCCAACATTTTGTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCGCGTTCCTTCTGGATTaGCATATTGATTATCTGGGC +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLAFLLD*HIDYLG
Trigger: GCCCAGATAATCAATATGCCAATCCAGAAGGAACGC...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACGCGTTCCTTCTGGATTaGCATATTGATTATCTGGGC +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYAFLLD*HIDYLG
Trigger: GCCCAGATAATCAATATGCCAATCCAGAAGGAACGC...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTTTCTTGAGGATAAACTaGCTTTACTCCCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACFLRIN*LYSHQP
Trigger: TGGCTGATGGGAGTAAAGTCAGTTTATCCTCAAGAA...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp GTAATCTTCTTCTCAGAACCTCCTCATGGTACCTTCTTCATAACTGACCATATTTTCTTGAGGATAAACTaGCTTTACTCCCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: VIFFSEPPHGTFFITDHIFLRIN*LYSHQP
Trigger: TGGCTGATGGGAGTAAAGTCAGTTTATCCTCAAGAA...AATATGGTCAGTTATGAAGAAGGTACCATGAGGAGGTTCTGAGAAGAAGATTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACTTCTTGAGGATAAACTaGCTTTACTCCCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYFLRIN*LYSHQP
Trigger: TGGCTGATGGGAGTAAAGTCAGTTTATCCTCAAGAA...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp GATTTTAAATCCAAATCTTGCTTTTCACGTGTGATAGGGTATTCAGGACTGGCTAATTCAGAGGCAAATTaGAGTCCTAGACCGTCATCT +
Preference number: 4 (lower is better)
Translates to: DFKSKSCFSRVIGYSGLANSEAN*SPRPSS
Trigger: AGATGACGGTCTAGGACTTCAATTTGCCTCTGAATT...AGCCAGTCCTGAATACCCTATCACACGTGAAAAGCAAGATTTGGATTTAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAAATTCAGAGGCAAATTaGAGTCCTAGACCGTCATCT +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSANSEAN*SPRPSS
Trigger: AGATGACGGTCTAGGACTTCAATTTGCCTCTGAATT...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233317.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp AGCAACAAAATGTTGGGTCCTGTTGGTGTAGCCAGTCTATTAGTCTATGTCTTTTCTGGATTGGCATATTaGTTATCTGGGCACTTGAAA +
Preference number: 4 (lower is better)
Translates to: SNKMLGPVGVASLLVYVFSGLAY*LSGHLK
Trigger: TTTCAAGTGCCCAGATAATCAATATGCCAATCCAGA...AAAGACATAGACTAATAGACTGGCTACACCAACAGGACCCAACATTTTGTTGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp TTGATATGTAACAGGAACCAACATTTTGCTGCATATTGGAAACATACTTCAGTGAGACAGGAAGGAAAGTaGGCCAGACACTACAGAACA +
Preference number: 4 (lower is better)
Translates to: LICNRNQHFAAYWKHTSVRQEGK*ARHYRT
Trigger: TGTTCTGTAGTGTCTGGCTCACTTTCCTTCCTGTCT...CACTGAAGTATGTTTCCAATATGCAGCAAAATGTTGGTTCCTGTTACATATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp GCCTTTTGCCATCTGGTAATCTCTGGAGTTAGTTACTATAGTTGTCTCTGGTTGAAGAAGTCTTCTTCATaGGCTGTCATATTGGAAATC +
Preference number: 4 (lower is better)
Translates to: AFCHLVISGVSYYSCLWLKKSSS*AVILEI
Trigger: GATTTCCAATATGACAGCTCATGAAGAAGACTTCTT...CAACCAGAGACAACTATAGTAACTAACTCCAGAGATTACCAGATGGCAAAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233312.2
CDS-3UTR GCA 90 bp TTGATCTTAGCCATTCTGAGTGGTGTGATTTGTATTTCCCTGATGACTAAGTATAGGGAAGAGAGCACCTaGAAAGAATCAAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: LILAILSGVICISLMTKYREEST*KESNSS
Trigger: ACTGGAGTTTGATTCTTTGCAGGTGCTCTCTTCCCT...ATACTTAGTCATCAGGGAAATACAAATCACACCACTCAGAATGGCTAAGATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR GCA 90 bp ACTCCTATTATCCATAGGTTTAGTCTTCTCATTGTGTCCTGGATTTCCTGGATGGATGACAAGGTATACTaGATATTGAGGGTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: TPIIHRFSLLIVSWISWMDDKVY*ILRVES
Trigger: AGACTCTACCCTCAATATGCAGTATACCTTGTCATC...CATCCAGGAAATCCAGGACACAATGAGAAGACTAAACCTATGGATAATAGGAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR GCA 90 bp AGGCTACTATACCCAGCAAACCTCCCAATTACCATAGACAGAGAAAACAAGATAACTGCAAATATGGTCTaGTGCATAATGCATGTGAGA +
Preference number: 4 (lower is better)
Translates to: RLLYPANLPITIDRENKITANMV*CIMHVR
Trigger: TCTCACATGCATTATGCAGCAGACCATATTTGCAGT...TATCTTGTTTTCTCTGTCTATGGTAATTGGGAGGTTTGCTGGGTATAGTAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp AGGCTACTATACCCAGCAAACCTCCCAATTACCATAGACAGAGAAAACAAGATAAAGAGCAGAAAAGCATaGAAGCCTTTAAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: RLLYPANLPITIDRENKIKSRKA*KPLRPR
Trigger: TCTTGGTCTTAAAGGCTTCCATGCTTTTCTGCTCTT...TATCTTGTTTTCTCTGTCTATGGTAATTGGGAGGTTTGCTGGGTATAGTAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACGGAAATCTCATTCTCTaGGCAGGGGATACAATCAAA +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYGNLIL*AGDTIK
Trigger: TTTGATTGTATCCCCTGCCCAGAGAATGAGATTTCC...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTGGAAATCTCATTCTCTaGGCAGGGGATACAATCAAA +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACGNLIL*AGDTIK
Trigger: TTTGATTGTATCCCCTGCCCAGAGAATGAGATTTCC...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCGGAAATCTCATTCTCTaGGCAGGGGATACAATCAAA +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLGNLIL*AGDTIK
Trigger: TTTGATTGTATCCCCTGCCCAGAGAATGAGATTTCC...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAGGAATGTCACAATTTTaGAGAGACAGTGCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSAGMSQF*RDSAFL
Trigger: AAGGAACGCACTGTCTCTCCAAAATTGTGACATTCC...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTGGAATGTCACAATTTTaGAGAGACAGTGCGTTCCTT +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACGMSQF*RDSAFL
Trigger: AAGGAACGCACTGTCTCTCCAAAATTGTGACATTCC...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp ACCCAAAAATTTCACCAGAGCTCTCCTAAACCTGATAAACAACATCAGCAGAGGCCACAAATAATCAGTTaGATCATGGTGCATATAGGA +
Preference number: 4 (lower is better)
Translates to: TQKFHQSSPKPDKQHQQRPQIIS*IMVHIG
Trigger: TCCTATATGCACCATGATCCAACTGATTATTTGTGG...CCTCTGCTGATGTTGTTTATCAGGTTTAGGAGAGCTCTGGTGAAATTTTTGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAACTATCAACAAATGGTaGAGAAGTTCCCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSATINKW*RSSQPD
Trigger: ATCTGGCTGGGAACTTCTCCACCATTTGTTGATAGT...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTACTATCAACAAATGGTaGAGAAGTTCCCAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACTINKW*RSSQPD
Trigger: ATCTGGCTGGGAACTTCTCCACCATTTGTTGATAGT...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTATCACTATCAACAAATaGTGGAGAAGTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACITINK*WRSSQP
Trigger: TGGCTGGGAACTTCTCCACCATTTGTTGATAGTGAT...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAATCACTATCAACAAATaGTGGAGAAGTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSAITINK*WRSSQP
Trigger: TGGCTGGGAACTTCTCCACCATTTGTTGATAGTGAT...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCATCACTATCAACAAATaGTGGAGAAGTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLITINK*WRSSQP
Trigger: TGGCTGGGAACTTCTCCACCATTTGTTGATAGTGAT...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCCTAAGGCCTTTCCATTaGTGCTATGATAGACAGGAA +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLLRPFH*CYDRQE
Trigger: TTCCTGTCTATCATAGCACCAATGGAAAGGCCTTAG...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTCTAAGGCCTTTCCATTaGTGCTATGATAGACAGGAA +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACLRPFH*CYDRQE
Trigger: TTCCTGTCTATCATAGCACCAATGGAAAGGCCTTAG...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp TTGATCTTAGCCATTCTGAGTGGTGTGATTTGTATTTCCCTGATGACTAAGTATGCATGTGTCTTCAACTaGAGCAGCTGTCATATTGGA +
Preference number: 4 (lower is better)
Translates to: LILAILSGVICISLMTKYACVFN*SSCHIG
Trigger: TCCAATATGACAGCTGCTCCAGTTGAAGACACATGC...ATACTTAGTCATCAGGGAAATACAAATCACACCACTCAGAATGGCTAAGATCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233075.2
CDS-3UTR CCA 90 bp ATCAAACAGCATGTGTCTTCAACTGGAGCAGCTATAATGAGATCATATTTGGGACATGAGCTGTCATATTaGAAATCTCATTCTCTGGGC +
Preference number: 4 (lower is better)
Translates to: IKQHVSSTGAAIMRSYLGHELSY*KSHSLG
Trigger: GCCCAGAGAATGAGATTTCCAATATGACAGCTCATG...TCCCAAATATGATCTCATTATAGCTGCTCCAGTTGAAGACACATGCTGTTTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233312.2
3UTR CAA 72 bp ACAAAGTACACATGGCAGGAGTTAAAGAGACAAAGTTaGAAGCAGAGACTGAAGGAACAATCATCCAGAAAC +
Preference number: 4 (lower is better)
Translates to: TKYTWQELKRQS*KQRLKEQSSRN
Trigger: GTTTCTGGATGATTGTTCCTTCAGTCTCTGCTTCAAACTTTGTCTCTTTAACTCCTGCCATGTGTACTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 72 bp TTTTGGAACTTCCTTGATGTTAAAGACCTTCAGATATaGCCAGGGGCTCAGACTTGTGCTTATCTTCAAATC +
Preference number: 4 (lower is better)
Translates to: FWNFLDVKDLQI*PGAQTCAYLQI
Trigger: GATTTGAAGATAAGCACAAGTCTGAGCCCCTGGCAATATCTGAAGGTCTTTAACATCAAGGAAGTTCCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp TTGGAACATATTCTGGATATTTGCCCAGGAGAGGTATaGCTGGATCATTCGGTAGTACTATGTCCATTTTTC +
Preference number: 4 (lower is better)
Translates to: LEHILDICPGEV*LDHSVVLCPFF
Trigger: GAAAAATGGACATAGTACTACCGAATGATCCAGCAATACCTCTCCTGGGCAAATATCCAGAATATGTTCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp CTGCACCTGAGAATATCTTCCATCTCTTGTATTTTGTaGCTGATGCTCGCATCTATGGTTCCAGATTTCTTT +
Preference number: 4 (lower is better)
Translates to: LHLRISSISCIL*LMLASMVPDFF
Trigger: AAAGAAATCTGGAACCATAGATGCGAGCATCAGCAACAAAATACAAGAGATGGAAGATATTCTCAGGTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp TTGGGATTCTGTTCTTGCCACTGTCTTCCTTTAGGTTaGTTGGATGATTACTTTCTTGCTTTTTCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: LGFCSCHCLPLG*LDDYFLAFSRV
Trigger: CACCCTAGAAAAAGCAAGAAAGTAATCATCCAACAAACCTAAAGGAAGACAGTGGCAAGAACAGAATCCCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp TATTCGATATTAGTATGTCTACTCCAGCTTGTATCTTaGCACCATTTGCGTGGAAAATTGCTTCCCAGCCTT +
Preference number: 4 (lower is better)
Translates to: YSILVCLLQLVS*HHLRGKLLPSL
Trigger: AAGGCTGGGAAGCAATTTTCCACGCAAATGGTGCAAAGATACAAGCTGGAGTAGACATACTAATATCGAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp AGAGTGAACCTGAAGGCCAGTACTACAGTAATTGTCTaGGTCAAGACAGTAGAGATAGCAACAGTAAATACA +
Preference number: 4 (lower is better)
Translates to: RVNLKASTTVIV*VKTVEIATVNT
Trigger: TGTATTTACTGTTGCTATCTCTACTGTCTTGACCAAGACAATTACTGTAGTACTGGCCTTCAGGTTCACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
CDS-3UTR TCA 90 bp CATAAACCAAGGTTATTTGGCATCATTATAACCCAATTCTCCCACCATAGCAATTTCTTGAGGATAAACTaGCTTTACTCCCATCAGCCA +
Preference number: 4 (lower is better)
Translates to: HKPRLFGIIITQFSHHSNFLRIN*LYSHQP
Trigger: TGGCTGATGGGAGTAAAGTCAGTTTATCCTCAAGAA...ATTGCTATGGTGGGAGAATTGGGTTATAATGATGCCAAATAACCTTGGTTTATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp ATTAAAACACATATCTCTGAGTGCCTCCAAAATGAAACATGGAGAGAGAGCATAAATTCAGAGGCAAATTaGAGTCCTAGACCGTCATCT +
Preference number: 4 (lower is better)
Translates to: IKTHISECLQNETWRESINSEAN*SPRPSS
Trigger: AGATGACGGTCTAGGACTTCAATTTGCCTCTGAATT...TATGCTCTCTCTCCATGTTTCATTTTGGAGGCACTCAGAGATATGTGTTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACGATTATCTGGGCACTTaGAACAATAATCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYDYLGT*NNNPCL
Trigger: CAGACATGGATTATTGTTTCAAGTGCCCAGATAATC...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAGATTATCTGGGCACTTaGAACAATAATCCATGTCTG +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSADYLGT*NNNPCL
Trigger: CAGACATGGATTATTGTTTCAAGTGCCCAGATAATC...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTTCTGGATTGGCATATTaGTTATCTGGGCACTTGAAA +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACSGLAY*LSGHLK
Trigger: TTTCAAGTGCCCAGATAATCAATATGCCAATCCAGA...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACTCTGGATTGGCATATTaGTTATCTGGGCACTTGAAA +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYSGLAY*LSGHLK
Trigger: TTTCAAGTGCCCAGATAATCAATATGCCAATCCAGA...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCTCTGGATTGGCATATTaGTTATCTGGGCACTTGAAA +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLSGLAY*LSGHLK
Trigger: TTTCAAGTGCCCAGATAATCAATATGCCAATCCAGA...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAAAAACAATAGATGAGTaGGATGAGCAGGCAGTAACT +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSAKTIDE*DEQAVT
Trigger: AGTTACTGCCTGCTCATCTCACTCATCTATTGTTTT...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTAAAACAATAGATGAGTaGGATGAGCAGGCAGTAACT +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACKTIDE*DEQAVT
Trigger: AGTTACTGCCTGCTCATCTCACTCATCTATTGTTTT...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCAAAACAATAGATGAGTaGGATGAGCAGGCAGTAACT +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLKTIDE*DEQAVT
Trigger: AGTTACTGCCTGCTCATCTCACTCATCTATTGTTTT...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCACAGCAACATTTTTCTTaGACATGTCTTGAGACTCCT +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSAQQHFS*TCLETP
Trigger: AGGAGTCTCAAGACATGTTCAAGAAAAATGTTGCTG...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233744.2
CDS-3UTR GCA 90 bp TTGATATGTAACAGGAACCAACATTTTGCTGCATATTGGAAACATACTTCAGTGAGGGAAGAGAGCACCTaGAAAGAATCAAACTCCAGT +
Preference number: 4 (lower is better)
Translates to: LICNRNQHFAAYWKHTSVREEST*KESNSS
Trigger: ACTGGAGTTTGATTCTTTGCAGGTGCTCTCTTCCCT...CACTGAAGTATGTTTCCAATATGCAGCAAAATGTTGGTTCCTGTTACATATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR GCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCGATGACAAGGTATACTaGATATTGAGGGTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLDDKVY*ILRVES
Trigger: AGACTCTACCCTCAATATGCAGTATACCTTGTCATC...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp ATCAAACAGCATGTGTCTTCAACTGGAGCAGCTATAATGAGATCATATTTGGGAGATGACAAGGTATACTaGATATTGAGGGTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: IKQHVSSTGAAIMRSYLGDDKVY*ILRVES
Trigger: AGACTCTACCCTCAATATGCAGTATACCTTGTCATC...TCCCAAATATGATCTCATTATAGCTGCTCCAGTTGAAGACACATGCTGTTTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR GCA 90 bp GCTGTGCTAAGATTAAAACACATATCTCTGAGTGCCTCCAAAATGAAACATGGAGATGACAAGGTATACTaGATATTGAGGGTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: AVLRLKHISLSASKMKHGDDKVY*ILRVES
Trigger: AGACTCTACCCTCAATATGCAGTATACCTTGTCATC...TCCATGTTTCATTTTGGAGGCACTCAGAGATATGTGTTTTAATCTTAGCACAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR GCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTGATGACAAGGTATACTaGATATTGAGGGTAGAGTCT +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACDDKVY*ILRVES
Trigger: AGACTCTACCCTCAATATGCAGTATACCTTGTCATC...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp ATGTTGGGTCCTGTTGGTGTAGCCAGTCTATTAGTCTATGTCTTTTTATTAGGGGCAAATATGGTCTGCTaGATAATGCATGTGAGAATA +
Preference number: 4 (lower is better)
Translates to: MLGPVGVASLLVYVFLLGANMVC*IMHVRI
Trigger: TATTCTCACATGCATTATGCAGCAGACCATATTTGC...CCCTAATAAAAAGACATAGACTAATAGACTGGCTACACCAACAGGACCCAACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR GCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAACTGCAAATATGGTCTaGTGCATAATGCATGTGAGA +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSATANMV*CIMHVR
Trigger: TCTCACATGCATTATGCAGCAGACCATATTTGCAGT...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCACTGCAAATATGGTCTaGTGCATAATGCATGTGAGA +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLTANMV*CIMHVR
Trigger: TCTCACATGCATTATGCAGCAGACCATATTTGCAGT...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACAGTGAAACTTGTCAGTaGAATAGAGCCCAAATATCC +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYSETCQ*NRAQIS
Trigger: GGATATTTGGGCTCTATTGCACTGACAAGTTTCACT...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCAGTGAAACTTGTCAGTaGAATAGAGCCCAAATATCC +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLSETCQ*NRAQIS
Trigger: GGATATTTGGGCTCTATTGCACTGACAAGTTTCACT...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTAGTGAAACTTGTCAGTaGAATAGAGCCCAAATATCC +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACSETCQ*NRAQIS
Trigger: GGATATTTGGGCTCTATTGCACTGACAAGTTTCACT...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACAAGAGCAGAAAAGCATaGAAGCCTTTAAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYKSRKA*KPLRPR
Trigger: TCTTGGTCTTAAAGGCTTCCATGCTTTTCTGCTCTT...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp CTCTTACAAAGCAGGTTGATTTATGTGTGCAATCCATCAGTGTATCCATTTGACAAGAGCAGAAAAGCATaGAAGCCTTTAAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: LLQSRLIYVCNPSVYPFDKSRKA*KPLRPR
Trigger: TCTTGGTCTTAAAGGCTTCCATGCTTTTCTGCTCTT...GTCAAATGGATACACTGATGGATTGCACACATAAATCAACCTGCTTTGTAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
CDS-3UTR CCA 90 bp TTTGCATTTCTTCTCTCAATTCAGAGGCAAATTGAAGTCCTAGACCGTCATCTGTTCTCAAAAAGCACTTaGGTTCATTCAAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: FAFLLSIQRQIEVLDRHLFSKST*VHSKSR
Trigger: TCTGCTCTTTGAATGAACCCAAGTGCTTTTTGAGAA...CAGATGACGGTCTAGGACTTCAATTTGCCTCTGAATTGAGAGAAGAAATGCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
CDS-3UTR CCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCGCAGGATTTACAAAATaGATGTTCTTCAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLAGFTK*MFFREE
Trigger: CTCTTCCCTGAAGAACATCCATTTTGTAAATCCTGC...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp GTAATCTTCTTCTCAGAACCTCCTCATGGTACCTTCTTCATAACTGACCATATTGCAGGATTTACAAAATaGATGTTCTTCAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: VIFFSEPPHGTFFITDHIAGFTK*MFFREE
Trigger: CTCTTCCCTGAAGAACATCCATTTTGTAAATCCTGC...AATATGGTCAGTTATGAAGAAGGTACCATGAGGAGGTTCTGAGAAGAAGATTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACGCAGGATTTACAAAATaGATGTTCTTCAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYAGFTK*MFFREE
Trigger: CTCTTCCCTGAAGAACATCCATTTTGTAAATCCTGC...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTGCAGGATTTACAAAATaGATGTTCTTCAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACAGFTK*MFFREE
Trigger: CTCTTCCCTGAAGAACATCCATTTTGTAAATCCTGC...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp ACTCCTATTATCCATAGGTTTAGTCTTCTCATTGTGTCCTGGATTTCCTGGATGGGATTTTCTAAATCCTaGATGACAAGGTATACTGCA +
Preference number: 4 (lower is better)
Translates to: TPIIHRFSLLIVSWISWMGFSKS*MTRYTA
Trigger: TGCAGTATACCTTGTCATCCAGGATTTAGAAAATCC...CATCCAGGAAATCCAGGACACAATGAGAAGACTAAACCTATGGATAATAGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp CCCTACCTCAGAGTCAAAGGTTGCAAACAATTTTTCAAGCAAATGGTCACAAGAACAATGGGAGTGTCTTaGTTCCTTAAAAAGATACCA +
Preference number: 4 (lower is better)
Translates to: PYLRVKGCKQFFKQMVTRTMGVS*FLKKIP
Trigger: TGGTATCTTTTTAAGGAACCAAGACACTCCCATTGT...TCTTGTGACCATTTGCTTGAAAAATTGTTTGCAACCTTTGACTCTGAGGTAGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGAATCACTATCAACAAATaGTGGAGAAGTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRITINK*WRSSQP
Trigger: TGGCTGGGAACTTCTCCACCATTTGTTGATAGTGAT...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 72 bp CATCTACTCCTATTATCCATAGGTTTAGTCTTCTCATaGTGTCCTGGATTTCCTGGATGTTTTGAGTTAGGA +
Preference number: 4 (lower is better)
Translates to: HLLLLSIGLVFS*CPGFPGCFELG
Trigger: TCCTAACTCAAAACATCCAGGAAATCCAGGACACAATGAGAAGACTAAACCTATGGATAATAGGAGTAGATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp CCTGTGAATCTACCTGTCAATCTCTTACAAAGCAGGTaGATTTATGTGTGCAATCCATCAGTGTATCCATTT +
Preference number: 4 (lower is better)
Translates to: PVNLPVNLLQSR*IYVCNPSVYPF
Trigger: AAATGGATACACTGATGGATTGCACACATAAATCAACCTGCTTTGTAAGAGATTGACAGGTAGATTCACAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR CAA 72 bp TTTGACAATGTATTTGCTTGCTGCAGAAGTAACTCATaGAGTGAATGGGCTACAGCATACACAGCATTGTAT +
Preference number: 4 (lower is better)
Translates to: FDNVFACCRSNS*SEWATAYTALY
Trigger: ATACAATGCTGTGTATGCTGTAGCCCATTCACTCAATGAGTTACTTCTGCAGCAAGCAAATACATTGTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
CDS-3UTR TCA 90 bp GCTGTGCTAAGATTAAAACACATATCTCTGAGTGCCTCCAAAATGAAACATGGACAGCAACATTTTTCTTaGACATGTCTTGAGACTCTT +
Preference number: 4 (lower is better)
Translates to: AVLRLKHISLSASKMKHGQQHFS*TCLETL
Trigger: AAGAGTCTCAAGACATGTTCAAGAAAAATGTTGCTG...TCCATGTTTCATTTTGGAGGCACTCAGAGATATGTGTTTTAATCTTAGCACAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCACAGCAACATTTTTCTTaGACATGTCTTGAGACTCTT +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSAQQHFS*TCLETL
Trigger: AAGAGTCTCAAGACATGTTCAAGAAAAATGTTGCTG...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000233317.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATATGTGGTTGTCCAATaGATAGCAGAGAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSAYVVVQ*IAENKE
Trigger: TTCTTTGTTCTCTGCTATTCATTGGACAACCACATA...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTTATGTGGTTGTCCAATaGATAGCAGAGAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACYVVVQ*IAENKE
Trigger: TTCTTTGTTCTCTGCTATTCATTGGACAACCACATA...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACTATGTGGTTGTCCAATaGATAGCAGAGAACAAAGAA +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYYVVVQ*IAENKE
Trigger: TTCTTTGTTCTCTGCTATTCATTGGACAACCACATA...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCACAAACAACCAAAATATaGCCATGTTCAATATGCCCA +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSAQTTKI*PCSICP
Trigger: TGGGCATATTGAACATGGTCATATTTTGGTTGTTTG...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR TCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTCAAACAACCAAAATATaGCCATGTTCAATATGCCCA +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACQTTKI*PCSICP
Trigger: TGGGCATATTGAACATGGTCATATTTTGGTTGTTTG...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp ACTTGTGCTTATCTTCAAATCCTTCCAACGTTTGGAGTTTTCAGTTGGTGTCTGAATGTATTTGCTTGCTaGAGAAGTAACTCATTGAGT +
Preference number: 4 (lower is better)
Translates to: TCAYLQILPTFGVFSWCLNVFAC*RSNSLS
Trigger: ACTCAATGAGTTACTTCTGCAGCAAGCAAATACATT...CAGACACCAACTGAAAACTCCAAACGTTGGAAGGATTTGAAGATAAGCACAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR GCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCGCAAATATGGTCTGCTaGATAATGCATGTGAGAATA +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLANMVC*IMHVRI
Trigger: TATTCTCACATGCATTATGCAGCAGACCATATTTGC...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAGCAAATATGGTCTGCTaGATAATGCATGTGAGAATA +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSAANMVC*IMHVRI
Trigger: TATTCTCACATGCATTATGCAGCAGACCATATTTGC...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCATTTTGGAGCAAAGATaGAGAGAAATATTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLILEQR*REIFLQ
Trigger: CTGCAGGAATATTTCTCTGCATCTTTGCTCCAAAAT...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR GCA 90 bp GATTTTAAATCCAAATCTTGCTTTTCACGTGTGATAGGGTATTCAGGACTGGCTATTTTGGAGCAAAGATaGAGAGAAATATTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: DFKSKSCFSRVIGYSGLAILEQR*REIFLQ
Trigger: CTGCAGGAATATTTCTCTGCATCTTTGCTCCAAAAT...AGCCAGTCCTGAATACCCTATCACACGTGAAAAGCAAGATTTGGATTTAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR GCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACATTTTGGAGCAAAGATaGAGAGAAATATTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYILEQR*REIFLQ
Trigger: CTGCAGGAATATTTCTCTGCATCTTTGCTCCAAAAT...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp ATTAAAACACATATCTCTGAGTGCCTCCAAAATGAAACATGGAGAGAGAGCATAAAGAGCAGAAAAGCATaGAAGCCTTTAAGACCAAGA +
Preference number: 4 (lower is better)
Translates to: IKTHISECLQNETWRESIKSRKA*KPLRPR
Trigger: TCTTGGTCTTAAAGGCTTCCATGCTTTTCTGCTCTT...TATGCTCTCTCTCCATGTTTCATTTTGGAGGCACTCAGAGATATGTGTTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTTTCTCAAAAAGCACTTaGGTTCATTCAAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACFSKST*VHSKSR
Trigger: TCTGCTCTTTGAATGAACCCAAGTGCTTTTTGAGAA...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCTTCTCAAAAAGCACTTaGGTTCATTCAAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLFSKST*VHSKSR
Trigger: TCTGCTCTTTGAATGAACCCAAGTGCTTTTTGAGAA...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000232799.2
ENSMUST00000233231.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp AGGCTACTATACCCAGCAAACCTCCCAATTACCATAGACAGAGAAAACAAGATAATGGACATTTCAAAGTaGTTTCTGGATAACCATTTC +
Preference number: 4 (lower is better)
Translates to: RLLYPANLPITIDRENKIMDISK*FLDNHF
Trigger: GAAATGGTTATCCAGAAACCACTTTGAAATGTCCAT...TATCTTGTTTTCTCTGTCTATGGTAATTGGGAGGTTTGCTGGGTATAGTAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAAACTTGTGTCACTCATaGACATTTCAAAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSANLCHS*TFQSGF
Trigger: GAAACCACTTTGAAATGTCCATGAGTGACACAAGTT...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCAACTTGTGTCACTCATaGACATTTCAAAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLNLCHS*TFQSGF
Trigger: GAAACCACTTTGAAATGTCCATGAGTGACACAAGTT...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACGGATTTTCTAAATCCTaGATGACAAGGTATACTGCA +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYGFSKS*MTRYTA
Trigger: TGCAGTATACCTTGTCATCCAGGATTTAGAAAATCC...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACACAATGGGAGTGTCTTaGTTCCTTAAAAAGATACCA +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYTMGVS*FLKKIP
Trigger: TGGTATCTTTTTAAGGAACCAAGACACTCCCATTGT...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTACAATGGGAGTGTCTTaGTTCCTTAAAAAGATACCA +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACTMGVS*FLKKIP
Trigger: TGGTATCTTTTTAAGGAACCAAGACACTCCCATTGT...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCCCACAAATAATCAGTTaGATCATGGTGCATATAGGA +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLPQIIS*IMVHIG
Trigger: TCCTATATGCACCATGATCCAACTGATTATTTGTGG...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCACAAATAATCAGTTaGATCATGGTGCATATAGGA +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYPQIIS*IMVHIG
Trigger: TCCTATATGCACCATGATCCAACTGATTATTTGTGG...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp TTGATATGTAACAGGAACCAACATTTTGCTGCATATTGGAAACATACTTCAGTGCTAAGGCCTTTCCATTaGTGCTATGATAGACAGGAA +
Preference number: 4 (lower is better)
Translates to: LICNRNQHFAAYWKHTSVLRPFH*CYDRQE
Trigger: TTCCTGTCTATCATAGCACCAATGGAAAGGCCTTAG...CACTGAAGTATGTTTCCAATATGCAGCAAAATGTTGGTTCCTGTTACATATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAGAAATATTCCTGCAGTaGAGGTTAAGATGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSAEIFLQ*RLRCRK
Trigger: TTTTCTGCATCTTAACCTCCACTGCAGGAATATTTC...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACGAAATATTCCTGCAGTaGAGGTTAAGATGCAGAAAA +
Preference number: 4 (lower is better)
Translates to: GVIICCFLEETLNMLELYEIFLQ*RLRCRK
Trigger: TTTTCTGCATCTTAACCTCCACTGCAGGAATATTTC...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
3UTR CAA 72 bp CCAAACTTTGTCTCTGTAATTCCTTCCATGGGTGTTTaGTTCCCTAATCTTAAAAGGAAGGAAGTATGCATA +
Preference number: 4 (lower is better)
Translates to: PNFVSVIPSMGV*FPNLKRKEVCI
Trigger: TATGCATACTTCCTTCCTTTTAAGATTAGGGAACAAAACACCCATGGAAGGAATTACAGAGACAAAGTTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp TATAAAGGCAGACCTATTAGGATTACATCAGACTTTTaGCCAGAGTCTATGAAATCTAGAAGATCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: YKGRPIRITSDF*PESMKSRRSWE
Trigger: TTCCCAGGATCTTCTAGATTTCATAGACTCTGGCAAAAAGTCTGATGTAATCCTAATAGGTCTGCCTTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp GCAAAGAATCAAACTCCAGTCCTTTCCCAACATTATTaGACAATGTATTTGCTTGCTGCAGAAGTAACTCAT +
Preference number: 4 (lower is better)
Translates to: AKNQTPVLSQHY*TMYLLAAEVTH
Trigger: ATGAGTTACTTCTGCAGCAAGCAAATACATTGTCAAATAATGTTGGGAAAGGACTGGAGTTTGATTCTTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
CDS-3UTR TCA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGACAGCAACATTTTTCTTaGACATGTCTTGAGACTCTT +
Preference number: 4 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRQQHFS*TCLETL
Trigger: AAGAGTCTCAAGACATGTTCAAGAAAAATGTTGCTG...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR TCA 90 bp CAGTCACTCAGTTCTTTTATTTCTAAGACCTTTGATTCTCCCTCTTTTATGTCTAAAACAATAGATGAGTaGGATGAGCAGGCAGTAACT +
Preference number: 4 (lower is better)
Translates to: QSLSSFISKTFDSPSFMSKTIDE*DEQAVT
Trigger: AGTTACTGCCTGCTCATCTCACTCATCTATTGTTTT...AGACATAAAAGAGGGAGAATCAAAGGTCTTAGAAATAAAAGAACTGAGTGACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR GCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCAATGTATTTGCTTGCTaGAGAAGTAACTCATTGAGT +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLNVFAC*RSNSLS
Trigger: ACTCAATGAGTTACTTCTGCAGCAAGCAAATACATT...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp CCAGAGTCTATGAAATCTAGAAGATCCTGGGAAGAAATCATATACAGCATAAGATTCTCAAAAAGCACTTaGGTTCATTCAAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PESMKSRRSWEEIIYSIRFSKST*VHSKSR
Trigger: TCTGCTCTTTGAATGAACCCAAGTGCTTTTTGAGAA...TCTTATGCTGTATATGATTTCTTCCCAGGATCTTCTAGATTTCATAGACTCTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp ATTAAAACACATATCTCTGAGTGCCTCCAAAATGAAACATGGAGAGAGAGCATATTCTCAAAAAGCACTTaGGTTCATTCAAAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: IKTHISECLQNETWRESIFSKST*VHSKSR
Trigger: TCTGCTCTTTGAATGAACCCAAGTGCTTTTTGAGAA...TATGCTCTCTCTCCATGTTTCATTTTGGAGGCACTCAGAGATATGTGTTTTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTATGGACATTTCAAAGTaGTTTCTGGATAACCATTTC +
Preference number: 4 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACMDISK*FLDNHF
Trigger: GAAATGGTTATCCAGAAACCACTTTGAAATGTCCAT...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCATGGACATTTCAAAGTaGTTTCTGGATAACCATTTC +
Preference number: 4 (lower is better)
Translates to: NYLLFSRGNIEHARALPLMDISK*FLDNHF
Trigger: GAAATGGTTATCCAGAAACCACTTTGAAATGTCCAT...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CCA 90 bp CATAAACCAAGGTTATTTGGCATCATTATAACCCAATTCTCCCACCATAGCAATAACTTGTGTCACTCATaGACATTTCAAAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: HKPRLFGIIITQFSHHSNNLCHS*TFQSGF
Trigger: GAAACCACTTTGAAATGTCCATGAGTGACACAAGTT...ATTGCTATGGTGGGAGAATTGGGTTATAATGATGCCAAATAACCTTGGTTTATG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CCA 90 bp TTGATATGTAACAGGAACCAACATTTTGCTGCATATTGGAAACATACTTCAGTGAACTTGTGTCACTCATaGACATTTCAAAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: LICNRNQHFAAYWKHTSVNLCHS*TFQSGF
Trigger: GAAACCACTTTGAAATGTCCATGAGTGACACAAGTT...CACTGAAGTATGTTTCCAATATGCAGCAAAATGTTGGTTCCTGTTACATATCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp CCTTTGATGAGTATGAAGTGCCTCTCCTTGTCTTTTTaGATAACTTTGGGTTGGAAGTCAATTTTATTCGAT +
Preference number: 4 (lower is better)
Translates to: PLMSMKCLSLSF*ITLGWKSILFD
Trigger: ATCGAATAAAATTGACTTCCAACCCAAAGTTATCAAAAAAGACAAGGAGAGGCACTTCATACTCATCAAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp GGCCCAGTCTACCAATTCCTCATACATAAGCAATTCTaGAGGATGTGTAAAGTATTTGAAAAACTTTCCTAT +
Preference number: 4 (lower is better)
Translates to: GPVYQFLIHKQF*RMCKVFEKLSY
Trigger: ATAGGAAAGTTTTTCAAATACTTTACACATCCTCAAGAATTGCTTATGTATGAGGAATTGGTAGACTGGGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233231.2
3UTR CAA 72 bp AAACTCTCAATTACCAGATATGGAGAAACCAAGGTATaGCATGTCAAAACCCAATTTACACAATATCTTTCC +
Preference number: 4 (lower is better)
Translates to: KLSITRYGETKV*HVKTQFTQYLS
Trigger: GGAAAGATATTGTGTAAATTGGGTTTTGACATGCAATACCTTGGTTTCTCCATATCTGGTAATTGAGAGTTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
3UTR CAA 72 bp TTTCTAAGACCTTTGATTCTCCCTCTTTTATGTCTCTaGGTACATTTGTTTTTCCAATGGCCCATTTCTTTA +
Preference number: 4 (lower is better)
Translates to: FLRPLILPLLCL*VHLFFQWPISL
Trigger: TAAAGAAATGGGCCATTGGAAAAACAAATGTACCAAGAGACATAAAAGAGGGAGAATCAAAGGTCTTAGAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp TTCTCAGCCATTCAGTATTCCTCAGTTGAGAATTCTTaGTTTAACTCTGTACCCCATTATTTAAATGGGATT +
Preference number: 4 (lower is better)
Translates to: FSAIQYSSVENS*FNSVPHYLNGI
Trigger: AATCCCATTTAAATAATGGGGTACAGAGTTAAACAAAGAATTCTCAACTGAGGAATACTGAATGGCTGAGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
3UTR CAA 72 bp TTTTCAGATACTTCTCAGCCATTCAGTATTCCTCAGTaGAGAATTCTTTGTTTAACTCTGTACCCCATTATT +
Preference number: 4 (lower is better)
Translates to: FSDTSQPFSIPQ*RILCLTLYPII
Trigger: AATAATGGGGTACAGAGTTAAACAAAGAATTCTCAACTGAGGAATACTGAATGGCTGAGAAGTATCTGAAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CAA 90 bp AGATGGCTCCCTGAGGTGTTCTGGCAGAGCCCTCCAGGGCAGACACCTCTCCTCTGCAGAAGTAACTCATaGAGTGAATGGGCTACAGCA +
Preference number: 5 (lower is better)
Translates to: RWLPEVFWQSPPGQTPLLCRSNS*SEWATA
Trigger: TGCTGTAGCCCATTCACTCAATGAGTTACTTCTGCA...GAGGAGAGGTGTCTGCCCTGGAGGGCTCTGCCAGAACACCTCAGGGAGCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS CCA 90 bp GGATGTTCTTCAGGGAAGAGAGCACCCTCCTCACCTCTGGAGTTCTaGAGATGTACAGAAGTGGTCCAAGCATTGCAGTTGGTAACCACA +
Preference number: 5 (lower is better)
Translates to: GCSSGKRAPSSPLEF*RCTEVVQALQLVTT
Trigger: TGTGGTTACCAACTGCAATGCTTGGACCACTTCTGTACATCTCCAGAACTCCAGAGGTGAGGAGGGTGCTCTCTTCCCTGAAGAACATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232799.2
CDS-3UTR CAA 90 bp GCTTCCCTACCCACCCACTTCCAATTCTTGGCTATGGCATTCCTCTACACTCGGAGGAATGTCACAATTTaGGAGAGACAGTGCGTTCCT +
Preference number: 5 (lower is better)
Translates to: ASLPTHFQFLAMAFLYTRRNVTI*ERQCVP
Trigger: AGGAACGCACTGTCTCTCCAAAATTGTGACATTCCT...CCGAGTGTAGAGGAATGCCATAGCCAAGAATTGGAAGTGGGTGGGTAGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR CAA 90 bp CGCCCAAGATTTCAGGTTCACAGGATATCAGAATCACAGGATCACAGAGACAGGCTGAGAGCTCGGTTATaGGCCTTGACAATGGGAGTG +
Preference number: 5 (lower is better)
Translates to: RPRFQVHRISESQDHRDRLRARL*ALTMGV
Trigger: CACTCCCATTGTCAAGGCCAATAACCGAGCTCTCAG...CCTGTCTCTGTGATCCTGTGATTCTGATATCCTGTGAACCTGAAATCTTGGGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR CAA 90 bp TCTCTGGTTGGAGATGTTCCTCCTGTGATTCTGTTAGCCTTTGTCAGCAGACCTTGCAGAAGTAACTCATaGAGTGAATGGGCTACAGCA +
Preference number: 5 (lower is better)
Translates to: SLVGDVPPVILLAFVSRPCRSNS*SEWATA
Trigger: TGCTGTAGCCCATTCACTCAATGAGTTACTTCTGCA...AGGTCTGCTGACAAAGGCTAACAGAATCACAGGAGGAACATCTCCAACCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS CCA 90 bp AAAGAAGTCTTCTTCATGAGCTGTCATATTGGAAATCTCATTCTCTaGGCAGGGGATACAATCAAAGCAACAGACAGCCTTTCCCTCCTG +
Preference number: 5 (lower is better)
Translates to: KEVFFMSCHIGNLIL*AGDTIKATDSLSLL
Trigger: CAGGAGGGAAAGGCTGTCTGTTGCTTTGATTGTATCCCCTGCCCAGAGAATGAGATTTCCAATATGACAGCTCATGAAGAAGACTTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233312.2
CDS-3UTR CAA 90 bp ACTCCTATTATCCATAGGTTTAGTCTTCTCATTGTGTCCTGGATTTCCTGGATGGTCCAAGCATTGCAGTaGGTAACCACATTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: TPIIHRFSLLIVSWISWMVQALQ*VTTLVL
Trigger: CAGGACCAATGTGGTTACCAACTGCAATGCTTGGAC...CATCCAGGAAATCCAGGACACAATGAGAAGACTAAACCTATGGATAATAGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CAA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCCTGAGAGCTCGGTTATaGGCCTTGACAATGGGAGTG +
Preference number: 5 (lower is better)
Translates to: NYLLFSRGNIEHARALPLLRARL*ALTMGV
Trigger: CACTCCCATTGTCAAGGCCAATAACCGAGCTCTCAG...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CAA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCACTGAGAGCTCGGTTATaGGCCTTGACAATGGGAGTG +
Preference number: 5 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSALRARL*ALTMGV
Trigger: CACTCCCATTGTCAAGGCCAATAACCGAGCTCTCAG...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS TCA 90 bp GGTTTCTGGATAACCATTTCAGCAACATTTTTCTTGAACATGTCTTaGGACTCCTCCTCACCTCTGGAGTTCTGGAGATGTACAGAAGTG +
Preference number: 5 (lower is better)
Translates to: GFWITISATFFLNMS*DSSSPLEFWRCTEV
Trigger: CACTTCTGTACATCTCCAGAACTCCAGAGGTGAGGAGGAGTCTCAAGACATGTTCAAGAAAAATGTTGCTGAAATGGTTATCCAGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233744.2
CDS-3UTR CAA 90 bp TGCACCATTTGCGTGGAAAATTGCTTCCCAGCCTTTCACTCTGAGGTAGTGTCTAGATGGGGGCTCATATaGATTTCTTCAATAGCAAAA +
Preference number: 5 (lower is better)
Translates to: CTICVENCFPAFHSEVVSRWGLI*ISSIAK
Trigger: TTTTGCTATTGAAGAAATCAATATGAGCCCCCATCT...AGACACTACCTCAGAGTGAAAGGCTGGGAAGCAATTTTCCACGCAAATGGTGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CAA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCGTCCAAGCATTGCAGTaGGTAACCACATTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: NYLLFSRGNIEHARALPLVQALQ*VTTLVL
Trigger: CAGGACCAATGTGGTTACCAACTGCAATGCTTGGAC...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CAA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTGTCCAAGCATTGCAGTaGGTAACCACATTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACVQALQ*VTTLVL
Trigger: CAGGACCAATGTGGTTACCAACTGCAATGCTTGGAC...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CAA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAGTCCAAGCATTGCAGTaGGTAACCACATTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSAVQALQ*VTTLVL
Trigger: CAGGACCAATGTGGTTACCAACTGCAATGCTTGGAC...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CAA 90 bp ACTCCAGCTTGTATCTTTGCACCATTTGCGTGGAAAATTGCTTCCCAGCCTTTCTTCTGGATTGGCATATaGATTATCTGGGCACTTGAA +
Preference number: 5 (lower is better)
Translates to: TPACIFAPFAWKIASQPFFWIGI*IIWALE
Trigger: TTCAAGTGCCCAGATAATCAATATGCCAATCCAGAA...GAAAGGCTGGGAAGCAATTTTCCACGCAAATGGTGCAAAGATACAAGCTGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR CAA 90 bp TTTCAGGTTCACAGGATATCAGAATCACAGGATCACAGAGACAGGTGCACTCTGAGATGGGGGCTCATATaGATTTCTTCAATAGCAAAA +
Preference number: 5 (lower is better)
Translates to: FQVHRISESQDHRDRCTLRWGLI*ISSIAK
Trigger: TTTTGCTATTGAAGAAATCAATATGAGCCCCCATCT...CAGAGTGCACCTGTCTCTGTGATCCTGTGATTCTGATATCCTGTGAACCTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000233075.2
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CAA 90 bp CAGTCACTCAGTTCTTTTATTTCTAAGACCTTTGATTCTCCCTCTTTTATGTCTGTCCAAGCATTGCAGTaGGTAACCACATTGGTCCTG +
Preference number: 5 (lower is better)
Translates to: QSLSSFISKTFDSPSFMSVQALQ*VTTLVL
Trigger: CAGGACCAATGTGGTTACCAACTGCAATGCTTGGAC...AGACATAAAAGAGGGAGAATCAAAGGTCTTAGAAATAAAAGAACTGAGTGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CAA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGCAGAAGTAACTCATaGAGTGAATGGGCTACAGCA +
Preference number: 5 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSACRSNS*SEWATA
Trigger: TGCTGTAGCCCATTCACTCAATGAGTTACTTCTGCA...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CAA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTTGCAGAAGTAACTCATaGAGTGAATGGGCTACAGCA +
Preference number: 5 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACCRSNS*SEWATA
Trigger: TGCTGTAGCCCATTCACTCAATGAGTTACTTCTGCA...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CAA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCTGCAGAAGTAACTCATaGAGTGAATGGGCTACAGCA +
Preference number: 5 (lower is better)
Translates to: NYLLFSRGNIEHARALPLCRSNS*SEWATA
Trigger: TGCTGTAGCCCATTCACTCAATGAGTTACTTCTGCA...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CAA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAAGGAATGTCACAATTTaGGAGAGACAGTGCGTTCCT +
Preference number: 5 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSARNVTI*ERQCVP
Trigger: AGGAACGCACTGTCTCTCCAAAATTGTGACATTCCT...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CAA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACAGGAATGTCACAATTTaGGAGAGACAGTGCGTTCCT +
Preference number: 5 (lower is better)
Translates to: GVIICCFLEETLNMLELYRNVTI*ERQCVP
Trigger: AGGAACGCACTGTCTCTCCAAAATTGTGACATTCCT...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CAA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCAGGAATGTCACAATTTaGGAGAGACAGTGCGTTCCT +
Preference number: 5 (lower is better)
Translates to: NYLLFSRGNIEHARALPLRNVTI*ERQCVP
Trigger: AGGAACGCACTGTCTCTCCAAAATTGTGACATTCCT...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CAA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACTTTCTTGAACATGTCTaGAGACTCCTCCTCACCTCT +
Preference number: 5 (lower is better)
Translates to: GVIICCFLEETLNMLELYFLEHV*RLLLTS
Trigger: AGAGGTGAGGAGGAGTCTCAAGACATGTTCAAGAAA...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233744.2
CDS-3UTR CAA 90 bp CCCTACCTCAGAGTCAAAGGTTGCAAACAATTTTTCAAGCAAATGGTCACAAGATCCACAAATAATCAGTaGGATCATGGTGCATATAGG +
Preference number: 5 (lower is better)
Translates to: PYLRVKGCKQFFKQMVTRSTNNQ*DHGAYR
Trigger: CCTATATGCACCATGATCCAACTGATTATTTGTGGA...TCTTGTGACCATTTGCTTGAAAAATTGTTTGCAACCTTTGACTCTGAGGTAGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233317.2
CDS-3UTR CAA 90 bp TTGATATGTAACAGGAACCAACATTTTGCTGCATATTGGAAACATACTTCAGTGGGAGCAGCTGTCATATaGGAAATCTCATTCTCTGGG +
Preference number: 5 (lower is better)
Translates to: LICNRNQHFAAYWKHTSVGAAVI*EISFSG
Trigger: CCCAGAGAATGAGATTTCCAATATGACAGCTGCTCC...CACTGAAGTATGTTTCCAATATGCAGCAAAATGTTGGTTCCTGTTACATATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233075.2
CDS-3UTR CAA 90 bp ACTTGTGCTTATCTTCAAATCCTTCCAACGTTTGGAGTTTTCAGTTGGTGTCTGAGATGGGGGCTCATATaGATTTCTTCAATAGCAAAA +
Preference number: 5 (lower is better)
Translates to: TCAYLQILPTFGVFSWCLRWGLI*ISSIAK
Trigger: TTTTGCTATTGAAGAAATCAATATGAGCCCCCATCT...CAGACACCAACTGAAAACTCCAAACGTTGGAAGGATTTGAAGATAAGCACAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000233312.2
ENSMUST00000233317.2
CDS-3UTR CAA 90 bp AATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACCCCTCTTCTGGATTGGCATATaGATTATCTGGGCACTTGAA +
Preference number: 5 (lower is better)
Translates to: NYLLFSRGNIEHARALPLFWIGI*IIWALE
Trigger: TTCAAGTGCCCAGATAATCAATATGCCAATCCAGAA...GAGGGGTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CAA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATTCTGGATTGGCATATaGATTATCTGGGCACTTGAA +
Preference number: 5 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSAFWIGI*IIWALE
Trigger: TTCAAGTGCCCAGATAATCAATATGCCAATCCAGAA...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CAA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATCCACAAATAATCAGTaGGATCATGGTGCATATAGG +
Preference number: 5 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSASTNNQ*DHGAYR
Trigger: CCTATATGCACCATGATCCAACTGATTATTTGTGGA...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CAA 90 bp GGGGTAATTATTTGCTGTTTTCTAGAGGAAACATTGAACATGCTAGAGCTCTACTCCACAAATAATCAGTaGGATCATGGTGCATATAGG +
Preference number: 5 (lower is better)
Translates to: GVIICCFLEETLNMLELYSTNNQ*DHGAYR
Trigger: CCTATATGCACCATGATCCAACTGATTATTTGTGGA...GTAGAGCTCTAGCATGTTCAATGTTTCCTCTAGAAAACAGCAAATAATTACCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CAA 90 bp AGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCATGTTCCACAAATAATCAGTaGGATCATGGTGCATATAGG +
Preference number: 5 (lower is better)
Translates to: RIPLVQWIDLSKSTSSACSTNNQ*DHGAYR
Trigger: CCTATATGCACCATGATCCAACTGATTATTTGTGGA...ACATGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS-3UTR CAA 90 bp TGTAGAATACCTTTGGTTCAGTGGATTGACTTATCTAAGAGCACTTCTTCAGCAAGATGGGGGCTCATATaGATTTCTTCAATAGCAAAA +
Preference number: 5 (lower is better)
Translates to: CRIPLVQWIDLSKSTSSARWGLI*ISSIAK
Trigger: TTTTGCTATTGAAGAAATCAATATGAGCCCCCATCT...TGCTGAAGAAGTGCTCTTAGATAAGTCAATCCACTGAACCAAAGGTATTCTACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000232799.2
ENSMUST00000233317.2
ENSMUST00000233744.2
ENSMUST00000233928.2
CDS CCA 72 bp TTCAAGTTCACTAGGTCTCCAGCAGGATTTACAAAATaGATGTTCTTCAGGGAAGAGAGCACCCTCCTCACC +
Preference number: 6 (lower is better)
Translates to: FKFTRSPAGFTK*MFFREESTLLT
Trigger: GGTGAGGAGGGTGCTCTCTTCCCTGAAGAACATCCATTTTGTAAATCCTGCTGGAGACCTAGTGAACTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232799.2
CDS CCA 72 bp AACTGGAGCAGCTGTCATATTGGAAATCTCATTCTCTaGGCAGGGGATACAATCAAAGCAACAGACAGCCTT +
Preference number: 6 (lower is better)
Translates to: NWSSCHIGNLIL*AGDTIKATDSL
Trigger: AAGGCTGTCTGTTGCTTTGATTGTATCCCCTGCCCAGAGAATGAGATTTCCAATATGACAGCTGCTCCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233075.2
CDS CAA 90 bp CTAGTCATCAAACAGCATGTGTCTTCAACTGGAGCAGCTGTCATATaGGAAATCTCATTCTCTGGGCAGGGGATACAATCAAAGCAACAG +
Preference number: 6 (lower is better)
Translates to: LVIKQHVSSTGAAVI*EISFSGQGIQSKQQ
Trigger: CTGTTGCTTTGATTGTATCCCCTGCCCAGAGAATGAGATTTCCAATATGACAGCTGCTCCAGTTGAAGACACATGCTGTTTGATGACTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233075.2
CDS CAA 72 bp AAACAGCATGTGTCTTCAACTGGAGCAGCTGTCATATaGGAAATCTCATTCTCTGGGCAGGGGATACAATCA +
Preference number: 6 (lower is better)
Translates to: KQHVSSTGAAVI*EISFSGQGIQS
Trigger: TGATTGTATCCCCTGCCCAGAGAATGAGATTTCCAATATGACAGCTGCTCCAGTTGAAGACACATGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233075.2
CDS CAA 90 bp TGGTTTCTGGATAACCATTTCAGCAACATTTTTCTTGAACATGTCTaGAGACTCCTCCTCACCTCTGGAGTTCTGGAGATGTACAGAAGT +
Preference number: 6 (lower is better)
Translates to: WFLDNHFSNIFLEHV*RLLLTSGVLEMYRS
Trigger: ACTTCTGTACATCTCCAGAACTCCAGAGGTGAGGAGGAGTCTCAAGACATGTTCAAGAAAAATGTTGCTGAAATGGTTATCCAGAAACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233744.2
CDS TCA 72 bp ATAACCATTTCAGCAACATTTTTCTTGAACATGTCTTaGGACTCCTCCTCACCTCTGGAGTTCTGGAGATGT +
Preference number: 6 (lower is better)
Translates to: ITISATFFLNMS*DSSSPLEFWRC
Trigger: ACATCTCCAGAACTCCAGAGGTGAGGAGGAGTCTCAAGACATGTTCAAGAAAAATGTTGCTGAAATGGTTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233744.2
CDS CCA 72 bp GTATGTACTAGTCATCAAACAGCATGTGTCTTCAACTaGAGCAGCTGTCATATTGGAAATCTCATTCTCTGG +
Preference number: 6 (lower is better)
Translates to: VCTSHQTACVFN*SSCHIGNLILW
Trigger: CCAGAGAATGAGATTTCCAATATGACAGCTGCTCCAGTTGAAGACACATGCTGTTTGATGACTAGTACATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233075.2