Pregenerated sensors for VMN2R75 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090436Ensembl transcript IDs: ENSMUST00000167830.3
Found 90 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCTTGTCCTTTCTGCTTGGGCAAACACCTAGTTTTTCTGCTCCCATaGAGATTCTATATCCCAATCCATCCTATAGGACCCACTGCACTC | + |
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Preference number: 1 (lower is better) Translates to: PCPFCLGKHLVFLLP*RFYIPIHPIGPTAL Trigger: GAGTGCAGTGGGTCCTATAGGATGGATTGGGATATAGAATCTTCATGGGAGCAGAAAAACTAGGTGTTTGCCCAAGCAGAAAGGACAAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR TCA 90 bp | GTGGCGCTGGCACAACTAGCAGTTATCATGCAGAAGAATGCAAATTaGTCCATTCTTTTCTCCTTTACAAAGCTCAAATATAAGTGGATC | + |
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Preference number: 1 (lower is better) Translates to: VALAQLAVIMQKNAN*SILFSFTKLKYKWI Trigger: GATCCACTTATATTTGAGCTTTGTAAAGGAGAAAAGAATGGATCAATTTGCATTCTTCTGCATGATAACTGCTAGTTGTGCCAGCGCCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR CCA 90 bp | ATAAAAACTGAATGGTACTGGTACAGCAACATACAGGTAGATCAATaGAATAGAATTGCAGACCCAGAAATGAACTCACACACCTATGGT | + |
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Preference number: 1 (lower is better) Translates to: IKTEWYWYSNIQVDQ*NRIADPEMNSHTYG Trigger: ACCATAGGTGTGTGAGTTCATTTCTGGGTCTGCAATTCTATTCCATTGATCTACCTGTATGTTGCTGTACCAGTACCATTCAGTTTTTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR CCA 90 bp | ATGTACAGAAGCTGGAAGCTACCCAGATGTTCCTCAGCAGAAGAATaGATACAGAAAATTTACCATATTTACATAATAGGGACTAGTCAG | + |
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Preference number: 1 (lower is better) Translates to: MYRSWKLPRCSSAEE*IQKIYHIYIIGTSQ Trigger: CTGACTAGTCCCTATTATGTAAATATGGTAAATTTTCTGTATCCATTCTTCTGCTGAGGAACATCTGGGTAGCTTCCAGCTTCTGTACAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR CCA 90 bp | CTCAAGCTCTATTACAGAGCATTTGTGATAAAAACTGAATGGTACTaGTACAGCAACATACAGGTAGATCAATGGAATAGAATTGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: LKLYYRAFVIKTEWY*YSNIQVDQWNRIAD Trigger: GTCTGCAATTCTATTCCATTGATCTACCTGTATGTTGCTGTACCAGTACCATTCAGTTTTTATCACAAATGCTCTGTAATAGAGCTTGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR CCA 90 bp | CCTTACCTCAAGCTCTATTACAGAGCATTTGTGATAAAAACTGAATaGTACTGGTACAGCAACATACAGGTAGATCAATGGAATAGAATT | + |
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Preference number: 1 (lower is better) Translates to: PYLKLYYRAFVIKTE*YWYSNIQVDQWNRI Trigger: AATTCTATTCCATTGATCTACCTGTATGTTGCTGTACCAGTACCATTCAGTTTTTATCACAAATGCTCTGTAATAGAGCTTGAGGTAAGG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR CAA 90 bp | TTCCATCCCTTCATCCCCTTCTACCTGGTCCTTGCTGCTACTGAGTaGGTCTGCTCCTGTGAAGACATAGATGGTATATATATCATCTAT | + |
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Preference number: 2 (lower is better) Translates to: FHPFIPFYLVLAATE*VCSCEDIDGIYIIY Trigger: ATAGATGATATATATACCATCTATGTCTTCACAGGAGCAGACCAACTCAGTAGCAGCAAGGACCAGGTAGAAGGGGATGAAGGGATGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCTTGGGCAAACACCTAGTTTTTCTGCTCCCATGAAGATTCTATATCCCAATCTGCTTCTGAGAGCCTaGTGTATTCAGGACCCATAT | + |
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Preference number: 2 (lower is better) Translates to: LLGQTPSFSAPMKILYPNLLLRA*CIQDPY Trigger: ATATGGGTCCTGAATACATCAGGCTCTCAGAAGCAG...ATTGGGATATAGAATCTTCATGGGAGCAGAAAAACTAGGTGTTTGCCCAAGCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCTTGGGCAAACACCTAGTTTTTCTGCTCCCATGAAGATTCTATATCCCAATACACCTATGGTCACTTaGTCTTTGACAAAGGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: LLGQTPSFSAPMKILYPNTPMVT*SLTKEL Trigger: TAGCTCCTTTGTCAAAGATCAAGTGACCATAGGTGT...ATTGGGATATAGAATCTTCATGGGAGCAGAAAAACTAGGTGTTTGCCCAAGCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR-3UTR TCA 90 bp | CTGCTTGGGCAAACACCTAGTTTTTCTGCTCCCATGAAGATTCTATATCCCAATTTTGAGCCAATAAACTaGAATCCAGGTCATGTGTTA | + |
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Preference number: 2 (lower is better) Translates to: LLGQTPSFSAPMKILYPNFEPIN*NPGHVL Trigger: TAACACATGACCTGGATTTCAGTTTATTGGCTCAAA...ATTGGGATATAGAATCTTCATGGGAGCAGAAAAACTAGGTGTTTGCCCAAGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR-3UTR CCA 90 bp | ACACCTAGTTTTTCTGCTCCCATGAAGATTCTATATCCCAATCCATCCTATAGGAGGCCACCAACAGATTaGGAAAGGATTTTTACCAAT | + |
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Preference number: 2 (lower is better) Translates to: TPSFSAPMKILYPNPSYRRPPTD*ERIFTN Trigger: ATTGGTAAAAATCCTTTCCCAATCTGTTGGTGGCCT...CCTATAGGATGGATTGGGATATAGAATCTTCATGGGAGCAGAAAAACTAGGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR-3UTR CCA 90 bp | CTGCTTGGGCAAACACCTAGTTTTTCTGCTCCCATGAAGATTCTATATCCCAATAAGCTCAAATATAAGTaGATCAAAGACCTCCACATA | + |
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Preference number: 2 (lower is better) Translates to: LLGQTPSFSAPMKILYPNKLKYK*IKDLHI Trigger: TATGTGGAGGTCTTTGATCCACTTATATTTGAGCTT...ATTGGGATATAGAATCTTCATGGGAGCAGAAAAACTAGGTGTTTGCCCAAGCAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR-3UTR TCA 90 bp | GTAATTCAAAAGATACTGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAATATCATCCCATGTCCTaGGGTATCATGTTGCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: VIQKILSIRQKGHQQIGKYHPMS*GIMLQR Trigger: TCTTTGCAACATGATACCTCAGGACATGGGATGATA...TTTCCCAATCTGTTGGTGGCCTTTTTGTCTTATTGACAGTATCTTTTGAATTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTAATTCAAAAGATACTGTCAATAAGACAAAAAGGCCACCAACAGATTGGACACTTGTAAGTCATTaGCCCTTAATTTCCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: FCNSKDTVNKTKRPPTDWTLVSH*PLISLP Trigger: AGGCAGGGAAATTAAGGGCCAATGACTTACAAGTGT...CCAATCTGTTGGTGGCCTTTTTGTCTTATTGACAGTATCTTTTGAATTACAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR CAA 90 bp | GAGCATCCTATTATAAAAATAGTATTTCACAACACTTGTAAGTCATaGGCCCTTAATTTCCCTGCCTCCTATGCCAAGATATTTTCTAAG | + |
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Preference number: 2 (lower is better) Translates to: EHPIIKIVFHNTCKS*ALNFPASYAKIFSK Trigger: CTTAGAAAATATCTTGGCATAGGAGGCAGGGAAATTAAGGGCCAATGACTTACAAGTGTTGTGAAATACTATTTTTATAATAGGATGCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR TCA 72 bp | CCCCAACCCCGAATCCCAGAGCTGCTTCTGAGAGCCTaGTGTATTCAGGACCCATATCCCACCCTCCTGCAT | + |
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Preference number: 3 (lower is better) Translates to: PQPRIPELLLRA*CIQDPYPTLLH Trigger: ATGCAGGAGGGTGGGATATGGGTCCTGAATACATCAGGCTCTCAGAAGCAGCTCTGGGATTCGGGGTTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR TCA 72 bp | GCACTTACCCCCAACCCCGAATCCCAGAGCTGCTTCTaGGAGCCTGATGTATTCAGGACCCATATCCCACCC | + |
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Preference number: 3 (lower is better) Translates to: ALTPNPESQSCF*EPDVFRTHIPP Trigger: GGGTGGGATATGGGTCCTGAATACATCAGGCTCTCAGAAGCAGCTCTGGGATTCGGGGTTGGGGGTAAGTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR CCA 72 bp | ACTCCCATTCCTTCCATCCCTTCATCCCCTTCTACCTaGTCCTTGCTGCTACTGAGTTGGTCTGCTCCTGTG | + |
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Preference number: 3 (lower is better) Translates to: TPIPSIPSSPST*SLLLLSWSAPV Trigger: CACAGGAGCAGACCAACTCAGTAGCAGCAAGGACCAGGTAGAAGGGGATGAAGGGATGGAAGGAATGGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR TCA 72 bp | TTCTGCTTGGGCAAACACCTAGTTTTTCTGCTCCCATaGAGATTCTATATCCCAATCCATCCTATAGGACCC | + |
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Preference number: 3 (lower is better) Translates to: FCLGKHLVFLLP*RFYIPIHPIGP Trigger: GGGTCCTATAGGATGGATTGGGATATAGAATCTTCATGGGAGCAGAAAAACTAGGTGTTTGCCCAAGCAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR-3UTR CAA 90 bp | ATGAACTCACACACCTATGGTCACTTGATCTTTGACAAAGGAGCTAAAACCATCAACACTTGTAAGTCATaGGCCCTTAATTTCCCTGCC | + |
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Preference number: 3 (lower is better) Translates to: MNSHTYGHLIFDKGAKTINTCKS*ALNFPA Trigger: GGCAGGGAAATTAAGGGCCAATGACTTACAAGTGTT...GATGGTTTTAGCTCCTTTGTCAAAGATCAAGTGACCATAGGTGTGTGAGTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR GCA 72 bp | GGCGCTGGCACAACTAGCAGTTATCATGCAGAAGAATaGAAATTGATCCATTCTTTTCTCCTTTACAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: GAGTTSSYHAEE*KLIHSFLLYKA Trigger: AGCTTTGTAAAGGAGAAAAGAATGGATCAATTTGCATTCTTCTGCATGATAACTGCTAGTTGTGCCAGCGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR CCA 72 bp | GAATGGTACTGGTACAGCAACATACAGGTAGATCAATaGAATAGAATTGCAGACCCAGAAATGAACTCACAC | + |
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Preference number: 3 (lower is better) Translates to: EWYWYSNIQVDQ*NRIADPEMNSH Trigger: GTGTGAGTTCATTTCTGGGTCTGCAATTCTATTCCATTGATCTACCTGTATGTTGCTGTACCAGTACCATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR TCA 72 bp | CAGAATAGCAATGGCTTGTGCCGTAAGATCAAGAATTaGCAAATGAGACCTCATAATATTGCAAAGCTTCTG | + |
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Preference number: 3 (lower is better) Translates to: QNSNGLCRKIKN*QMRPHNIAKLL Trigger: CAGAAGCTTTGCAATATTATGAGGTCTCATTTGTCAATTCTTGATCTTACGGCACAAGCCATTGCTATTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR-3UTR CAA 90 bp | ACCCAAAGGATAAACCTGCTTAGAAAGATATTAGGGAAACAATATCCTTCAGAAAAGGCCACCAACAGATaGGGAAAGGATTTTTACCAA | + |
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Preference number: 3 (lower is better) Translates to: TQRINLLRKILGKQYPSEKATNR*GKDFYQ Trigger: TTGGTAAAAATCCTTTCCCAATCTGTTGGTGGCCTT...TTCTGAAGGATATTGTTTCCCTAATATCTTTCTAAGCAGGTTTATCCTTTGGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR TCA 72 bp | GCAATGGCTTGTGCCGTAAGATCAAGAATTGACAAATaGGACCTCATAATATTGCAAAGCTTCTGTAATTCA | + |
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Preference number: 3 (lower is better) Translates to: AMACAVRSRIDK*DLIILQSFCNS Trigger: TGAATTACAGAAGCTTTGCAATATTATGAGGTCTCATTTGTCAATTCTTGATCTTACGGCACAAGCCATTGC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR CCA 72 bp | GATACTGTCAATAAGACAAAAAGGCCACCAACAGATTaGGAAAGGATTTTTACCAATCCTAAATCTGATAGG | + |
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Preference number: 3 (lower is better) Translates to: DTVNKTKRPPTD*ERIFTNPKSDR Trigger: CCTATCAGATTTAGGATTGGTAAAAATCCTTTCCCAATCTGTTGGTGGCCTTTTTGTCTTATTGACAGTATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR CCA 72 bp | AAGCTCTATTACAGAGCATTTGTGATAAAAACTGAATaGTACTGGTACAGCAACATACAGGTAGATCAATGG | + |
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Preference number: 3 (lower is better) Translates to: KLYYRAFVIKTE*YWYSNIQVDQW Trigger: CCATTGATCTACCTGTATGTTGCTGTACCAGTACCATTCAGTTTTTATCACAAATGCTCTGTAATAGAGCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR-3UTR CAA 90 bp | GTAATTCAAAAGATACTGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAACCGGTCTGTTATTCTTaGTACTTTAAACCCTTATGG | + |
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Preference number: 3 (lower is better) Translates to: VIQKILSIRQKGHQQIGKPVCYS*YFKPLW Trigger: CCATAAGGGTTTAAAGTACAAAGAATAACAGACCGG...TTTCCCAATCTGTTGGTGGCCTTTTTGTCTTATTGACAGTATCTTTTGAATTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR CCA 72 bp | TATTACAGAGCATTTGTGATAAAAACTGAATGGTACTaGTACAGCAACATACAGGTAGATCAATGGAATAGA | + |
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Preference number: 3 (lower is better) Translates to: YYRAFVIKTEWY*YSNIQVDQWNR Trigger: TCTATTCCATTGATCTACCTGTATGTTGCTGTACCAGTACCATTCAGTTTTTATCACAAATGCTCTGTAATA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR GCA 90 bp | ACACCTAGTTTTTCTGCTCCCATGAAGATTCTATATCCCAATCCATCCTATAGGTGCAGAAGCATCTCATaGACTGAGTGGGCCACAGCA | + |
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Preference number: 4 (lower is better) Translates to: TPSFSAPMKILYPNPSYRCRSIS*TEWATA Trigger: TGCTGTGGCCCACTCAGTGCATGAGATGCTTCTGCA...CCTATAGGATGGATTGGGATATAGAATCTTCATGGGAGCAGAAAAACTAGGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR CAA 72 bp | GCAGACCCAGAAATGAACTCACACACCTATGGTCACTaGATCTTTGACAAAGGAGCTAAAACCATCCAGTGG | + |
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Preference number: 4 (lower is better) Translates to: ADPEMNSHTYGH*IFDKGAKTIQW Trigger: CCACTGGATGGTTTTAGCTCCTTTGTCAAAGATCAAGTGACCATAGGTGTGTGAGTTCATTTCTGGGTCTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR CAA 72 bp | TTCATCCCCTTCTACCTGGTCCTTGCTGCTACTGAGTaGGTCTGCTCCTGTGAAGACATAGATGGTATATAT | + |
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Preference number: 4 (lower is better) Translates to: FIPFYLVLAATE*VCSCEDIDGIY Trigger: ATATATACCATCTATGTCTTCACAGGAGCAGACCAACTCAGTAGCAGCAAGGACCAGGTAGAAGGGGATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR TCA 90 bp | CTCTGGGGGAATCACTATGCCTTACCTCAAGCTCTATTACAGAGCATTTGTGATATTGAGGGTAGAATCTaGTCCATATCTGTAGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: LWGNHYALPQALLQSICDIEGRI*SISVAH Trigger: GTGGGCTACAGATATGGATCAGATTCTACCCTCAAT...ATCACAAATGCTCTGTAATAGAGCTTGAGGTAAGGCATAGTGATTCCCCCAGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR TCA 90 bp | CTGCTTGGGCAAACACCTAGTTTTTCTGCTCCCATGAAGATTCTATATCCCAATCTATCCAGTTCCATCTaGAATGAACCACTAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: LLGQTPSFSAPMKILYPNLSSSI*NEPLGT Trigger: TGTCCCTAGTGGTTCATTTCAGATGGAACTGGATAG...ATTGGGATATAGAATCTTCATGGGAGCAGAAAAACTAGGTGTTTGCCCAAGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR GCA 90 bp | ACACCTAGTTTTTCTGCTCCCATGAAGATTCTATATCCCAATCCATCCTATAGGACTTTGGGGCATAAATaGAAAGAAGCAGCCCTGCAC | + |
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Preference number: 4 (lower is better) Translates to: TPSFSAPMKILYPNPSYRTLGHK*KEAALH Trigger: GTGCAGGGCTGCTTCTTTGCATTTATGCCCCAAAGT...CCTATAGGATGGATTGGGATATAGAATCTTCATGGGAGCAGAAAAACTAGGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CCA 90 bp | ATGAACTCACACACCTATGGTCACTTGATCTTTGACAAAGGAGCTAAAACCATCCCACCTCATTCTTCCTaGGACAGTGATCTTGAATGC | + |
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Preference number: 4 (lower is better) Translates to: MNSHTYGHLIFDKGAKTIPPHSS*DSDLEC Trigger: GCATTCAAGATCACTGTCCCAGGAAGAATGAGGTGG...GATGGTTTTAGCTCCTTTGTCAAAGATCAAGTGACCATAGGTGTGTGAGTTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR GCA 90 bp | CCCTTAATTTCCCTGCCTCCTATGCCAAGATATTTTCTAAGCCTTGATGGGGAATTCCTCACTTTTAAATaGCAAACCAGTTCTCTCACC | + |
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Preference number: 4 (lower is better) Translates to: PLISLPPMPRYFLSLDGEFLTFK*QTSSLT Trigger: GGTGAGAGAACTGGTTTGGCATTTAAAAGTGAGGAA...TTCCCCATCAAGGCTTAGAAAATATCTTGGCATAGGAGGCAGGGAAATTAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CCA 90 bp | TTCACAACACTTGTAAGTCATTGGCCCTTAATTTCCCTGCCTCCTATGCCAAGAGGCATATTGATCTTCTaGACATTTCACACACTGATC | + |
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Preference number: 4 (lower is better) Translates to: FTTLVSHWPLISLPPMPRGILIF*TFHTLI Trigger: GATCAGTGTGTGAAATGTCCAGAAGATCAATATGCC...TCTTGGCATAGGAGGCAGGGAAATTAAGGGCCAATGACTTACAAGTGTTGTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CCA 90 bp | CCCTTAATTTCCCTGCCTCCTATGCCAAGATATTTTCTAAGCCTTGATGGGGAACAAAAATTATGTATTTaGGTGCCCCTGACACAAGCA | + |
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Preference number: 4 (lower is better) Translates to: PLISLPPMPRYFLSLDGEQKLCI*VPLTQA Trigger: TGCTTGTGTCAGGGGCACCCAAATACATAATTTTTG...TTCCCCATCAAGGCTTAGAAAATATCTTGGCATAGGAGGCAGGGAAATTAAGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR TCA 90 bp | TTCACAACACTTGTAAGTCATTGGCCCTTAATTTCCCTGCCTCCTATGCCAAGAGGACATTTCACACACTaGTCCATATTTGTCATGTTT | + |
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Preference number: 4 (lower is better) Translates to: FTTLVSHWPLISLPPMPRGHFTH*SIFVMF Trigger: AAACATGACAAATATGGATCAGTGTGTGAAATGTCC...TCTTGGCATAGGAGGCAGGGAAATTAAGGGCCAATGACTTACAAGTGTTGTGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR TCA 90 bp | ATGAACTCACACACCTATGGTCACTTGATCTTTGACAAAGGAGCTAAAACCATCACAAGAAAGCTACAGTaGAACTTGCTAGAGCAACAG | + |
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Preference number: 4 (lower is better) Translates to: MNSHTYGHLIFDKGAKTITRKLQ*NLLEQQ Trigger: CTGTTGCTCTAGCAAGTTTCACTGTAGCTTTCTTGT...GATGGTTTTAGCTCCTTTGTCAAAGATCAAGTGACCATAGGTGTGTGAGTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR GCA 90 bp | ACCCAAAGGATAAACCTGCTTAGAAAGATATTAGGGAAACAATATCCTTCAGAAGGCAGCCACAGTGAATaGAATGGCAAATGCAGTCTG | + |
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Preference number: 4 (lower is better) Translates to: TQRINLLRKILGKQYPSEGSHSE*NGKCSL Trigger: CAGACTGCATTTGCCATTGCATTCACTGTGGCTGCC...TTCTGAAGGATATTGTTTCCCTAATATCTTTCTAAGCAGGTTTATCCTTTGGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CCA 90 bp | ACACCTAGTTTTTCTGCTCCCATGAAGATTCTATATCCCAATCCATCCTATAGGTTCTCCAAAAGCATCTaGGGTCACTCAAATGACAGA | + |
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Preference number: 4 (lower is better) Translates to: TPSFSAPMKILYPNPSYRFSKSI*GHSNDR Trigger: TCTGTCATTTGAGTGACCCCAGATGCTTTTGGAGAA...CCTATAGGATGGATTGGGATATAGAATCTTCATGGGAGCAGAAAAACTAGGTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR TCA 90 bp | ATGAACTCACACACCTATGGTCACTTGATCTTTGACAAAGGAGCTAAAACCATCCTGGGGTCACTCAAATaGCAGAAAATAATGGAAATC | + |
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Preference number: 4 (lower is better) Translates to: MNSHTYGHLIFDKGAKTILGSLK*QKIMEI Trigger: GATTTCCATTATTTTCTGTCATTTGAGTGACCCCAG...GATGGTTTTAGCTCCTTTGTCAAAGATCAAGTGACCATAGGTGTGTGAGTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR TCA 90 bp | ATGAACTCACACACCTATGGTCACTTGATCTTTGACAAAGGAGCTAAAACCATCTTCACTACTGTAGTTTaGAGGGTGTACTGTTTGGAT | + |
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Preference number: 4 (lower is better) Translates to: MNSHTYGHLIFDKGAKTIFTTVV*RVYCLD Trigger: ATCCAAACAGTACACCCTTCAAACTACAGTAGTGAA...GATGGTTTTAGCTCCTTTGTCAAAGATCAAGTGACCATAGGTGTGTGAGTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CCA 90 bp | CTCTGGGGGAATCACTATGCCTTACCTCAAGCTCTATTACAGAGCATTTGTGATGAAGGGTGTACTGTTTaGATGAATTTTTCAAAACCA | + |
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Preference number: 4 (lower is better) Translates to: LWGNHYALPQALLQSICDEGCTV*MNFSKP Trigger: TGGTTTTGAAAAATTCATCCAAACAGTACACCCTTC...ATCACAAATGCTCTGTAATAGAGCTTGAGGTAAGGCATAGTGATTCCCCCAGAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CCA 90 bp | ACACCTAGTTTTTCTGCTCCCATGAAGATTCTATATCCCAATCCATCCTATAGGCAAACAATGATGATGTaGCCATGTGTCATGTGTACA | + |
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Preference number: 4 (lower is better) Translates to: TPSFSAPMKILYPNPSYRQTMMM*PCVMCT Trigger: TGTACACATGACACATGGCCACATCATCATTGTTTG...CCTATAGGATGGATTGGGATATAGAATCTTCATGGGAGCAGAAAAACTAGGTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CCA 90 bp | ACACCTAGTTTTTCTGCTCCCATGAAGATTCTATATCCCAATCCATCCTATAGGTTAAATGGTTTGTCTTaGGTGTCACCTTCTTGTCTA | + |
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Preference number: 4 (lower is better) Translates to: TPSFSAPMKILYPNPSYRLNGLS*VSPSCL Trigger: TAGACAAGAAGGTGACACCCAAGACAAACCATTTAA...CCTATAGGATGGATTGGGATATAGAATCTTCATGGGAGCAGAAAAACTAGGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR GCA 90 bp | ACCCAAAGGATAAACCTGCTTAGAAAGATATTAGGGAAACAATATCCTTCAGAAGAATGCAATGGCAAATaGAGTCTGTTGCAGAATACA | + |
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Preference number: 4 (lower is better) Translates to: TQRINLLRKILGKQYPSEECNGK*SLLQNT Trigger: TGTATTCTGCAACAGACTGCATTTGCCATTGCATTC...TTCTGAAGGATATTGTTTCCCTAATATCTTTCTAAGCAGGTTTATCCTTTGGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CCA 90 bp | ACCCAAAGGATAAACCTGCTTAGAAAGATATTAGGGAAACAATATCCTTCAGAAGTGTTTGGTCTTCATTaGCATATTGATCTTCTGGAC | + |
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Preference number: 4 (lower is better) Translates to: TQRINLLRKILGKQYPSEVFGLH*HIDLLD Trigger: GTCCAGAAGATCAATATGCCAATGAAGACCAAACAC...TTCTGAAGGATATTGTTTCCCTAATATCTTTCTAAGCAGGTTTATCCTTTGGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR GCA 90 bp | ACCCAAAGGATAAACCTGCTTAGAAAGATATTAGGGAAACAATATCCTTCAGAAGCAAATGCAGTCTGTTaGAGAATACAGATGAACATA | + |
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Preference number: 4 (lower is better) Translates to: TQRINLLRKILGKQYPSEANAVC*RIQMNI Trigger: TATGTTCATCTGTATTCTGCAACAGACTGCATTTGC...TTCTGAAGGATATTGTTTCCCTAATATCTTTCTAAGCAGGTTTATCCTTTGGGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| 3UTR CAA 72 bp | GTTTTACTTAAGGTGGAGTACCCGGTCTGTTATTCTTaGTACTTTAAACCCTTATGGTTTTCTTACCCAATT | + |
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Preference number: 4 (lower is better) Translates to: VLLKVEYPVCYS*YFKPLWFSYPI Trigger: AATTGGGTAAGAAAACCATAAGGGTTTAAAGTACAAAGAATAACAGACCGGGTACTCCACCTTAAGTAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CCA 90 bp | GTAATTCAAAAGATACTGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAACTCCTAGATCATTTTTaGCGTCTTTTATTCTCCAAA | + |
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Preference number: 4 (lower is better) Translates to: VIQKILSIRQKGHQQIGKLLDHF*RLLFSK Trigger: TTTGGAGAATAAAAGACGCCAAAAATGATCTAGGAG...TTTCCCAATCTGTTGGTGGCCTTTTTGTCTTATTGACAGTATCTTTTGAATTAC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CCA 90 bp | TTCTGTAATTCAAAAGATACTGTCAATAAGACAAAAAGGCCACCAACAGATTGGTCCTGTTTTAAATTCTaGTTCATGTTGACTAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: FCNSKDTVNKTKRPPTDWSCFKF*FMLTRS Trigger: AGACCTAGTCAACATGAACCAGAATTTAAAACAGGA...CCAATCTGTTGGTGGCCTTTTTGTCTTATTGACAGTATCTTTTGAATTACAGAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS TCA 90 bp | CAGCTGAATCATGGTGCACACAAAAATTATGTATTTGGGTGCCCCTaGCACAAGCAGCCACCTCATTCTTCCTGGGACAGTGATCTTGAA | + |
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Preference number: 5 (lower is better) Translates to: QLNHGAHKNYVFGCP*HKQPPHSSWDSDLE Trigger: TTCAAGATCACTGTCCCAGGAAGAATGAGGTGGCTGCTTGTGTCAGGGGCACCCAAATACATAATTTTTGTGTGCACCATGATTCAGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CAA 90 bp | CTGCTTGGGCAAACACCTAGTTTTTCTGCTCCCATGAAGATTCTATATCCCAATACCATAGTCTTTCCTTaGGTGCTGTGGTACACAGGG | + |
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Preference number: 5 (lower is better) Translates to: LLGQTPSFSAPMKILYPNTIVFP*VLWYTG Trigger: CCCTGTGTACCACAGCACCAAAGGAAAGACTATGGT...ATTGGGATATAGAATCTTCATGGGAGCAGAAAAACTAGGTGTTTGCCCAAGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CAA 90 bp | CCCTTAATTTCCCTGCCTCCTATGCCAAGATATTTTCTAAGCCTTGATGGGGAACCTGGGACAGTGATCTaGAATGCCAGTATTACAGTA | + |
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Preference number: 5 (lower is better) Translates to: PLISLPPMPRYFLSLDGEPGTVI*NASITV Trigger: TACTGTAATACTGGCATTCAAGATCACTGTCCCAGG...TTCCCCATCAAGGCTTAGAAAATATCTTGGCATAGGAGGCAGGGAAATTAAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CAA 90 bp | CTGCTTGGGCAAACACCTAGTTTTTCTGCTCCCATGAAGATTCTATATCCCAATAACATCCACAACTTTTaGGAGGCAGAGTGTTTGGTC | + |
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Preference number: 5 (lower is better) Translates to: LLGQTPSFSAPMKILYPNNIHNF*EAECLV Trigger: GACCAAACACTCTGCCTCCAAAAAGTTGTGGATGTT...ATTGGGATATAGAATCTTCATGGGAGCAGAAAAACTAGGTGTTTGCCCAAGCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS CCA 90 bp | AATGATGATGTGGCCATGTGTCATGTGTACATCAGTTTCAACAAATaGAGGAGAAGTTCCCAGCCAGATTCCACAGAAAATCAGCTGAAT | + |
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Preference number: 5 (lower is better) Translates to: NDDVAMCHVYISFNK*RRSSQPDSTENQLN Trigger: ATTCAGCTGATTTTCTGTGGAATCTGGCTGGGAACTTCTCCTCCATTTGTTGAAACTGATGTACACATGACACATGGCCACATCATCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CAA 90 bp | ATGAACTCACACACCTATGGTCACTTGATCTTTGACAAAGGAGCTAAAACCATCGTTTGGTTATTGGCTTaGACTATGGGAGATTCTCGG | + |
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Preference number: 5 (lower is better) Translates to: MNSHTYGHLIFDKGAKTIVWLLA*TMGDSR Trigger: CCGAGAATCTCCCATAGTCAAAGCCAATAACCAAAC...GATGGTTTTAGCTCCTTTGTCAAAGATCAAGTGACCATAGGTGTGTGAGTTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CAA 90 bp | CTCTGGGGGAATCACTATGCCTTACCTCAAGCTCTATTACAGAGCATTTGTGATGACATAGCTGAGAGTTaGGTTATTGGCTTTGACTAT | + |
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Preference number: 5 (lower is better) Translates to: LWGNHYALPQALLQSICDDIAES*VIGFDY Trigger: ATAGTCAAAGCCAATAACCAAACTCTCAGCTATGTC...ATCACAAATGCTCTGTAATAGAGCTTGAGGTAAGGCATAGTGATTCCCCCAGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CAA 90 bp | CTGCTTGGGCAAACACCTAGTTTTTCTGCTCCCATGAAGATTCTATATCCCAATATTAAATGGTTTGTCTaGGGTGTCACCTTCTTGTCT | + |
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Preference number: 5 (lower is better) Translates to: LLGQTPSFSAPMKILYPNIKWFV*GVTFLS Trigger: AGACAAGAAGGTGACACCCAAGACAAACCATTTAAT...ATTGGGATATAGAATCTTCATGGGAGCAGAAAAACTAGGTGTTTGCCCAAGCAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CAA 90 bp | CTCTGGGGGAATCACTATGCCTTACCTCAAGCTCTATTACAGAGCATTTGTGATACAGACAATGTGTTTTaGCATTTCTCCTCTCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: LWGNHYALPQALLQSICDTDNVF*HFSSQF Trigger: GAATTGAGAGGAGAAATGCAAAAACACATTGTCTGT...ATCACAAATGCTCTGTAATAGAGCTTGAGGTAAGGCATAGTGATTCCCCCAGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CAA 90 bp | ATGAACTCACACACCTATGGTCACTTGATCTTTGACAAAGGAGCTAAAACCATCTATGTCCACCACAGTTaGGCAAGGGAAAATTCACTA | + |
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Preference number: 5 (lower is better) Translates to: MNSHTYGHLIFDKGAKTIYVHHS*ARENSL Trigger: TAGTGAATTTTCCCTTGCCAAACTGTGGTGGACATA...GATGGTTTTAGCTCCTTTGTCAAAGATCAAGTGACCATAGGTGTGTGAGTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CAA 90 bp | ATGAACTCACACACCTATGGTCACTTGATCTTTGACAAAGGAGCTAAAACCATCGGCAAATGCAGTCTGTaGCAGAATACAGATGAACAT | + |
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Preference number: 5 (lower is better) Translates to: MNSHTYGHLIFDKGAKTIGKCSL*QNTDEH Trigger: ATGTTCATCTGTATTCTGCAACAGACTGCATTTGCC...GATGGTTTTAGCTCCTTTGTCAAAGATCAAGTGACCATAGGTGTGTGAGTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CAA 90 bp | ACACCTAGTTTTTCTGCTCCCATGAAGATTCTATATCCCAATCCATCCTATAGGACTAGCAGAGAAATGTaGGGTAAAATATGTCCATTC | + |
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Preference number: 5 (lower is better) Translates to: TPSFSAPMKILYPNPSYRTSREM*GKICPF Trigger: GAATGGACATATTTTACCCAACATTTCTCTGCTAGT...CCTATAGGATGGATTGGGATATAGAATCTTCATGGGAGCAGAAAAACTAGGTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CAA 90 bp | GTAATTCAAAAGATACTGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAACCATATGTCTACTTGTaGCAGAAGCATCTCATGCAC | + |
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Preference number: 5 (lower is better) Translates to: VIQKILSIRQKGHQQIGKPYVYL*QKHLMH Trigger: GTGCATGAGATGCTTCTGCAACAAGTAGACATATGG...TTTCCCAATCTGTTGGTGGCCTTTTTGTCTTATTGACAGTATCTTTTGAATTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CAA 90 bp | GTAATTCAAAAGATACTGTCAATAAGACAAAAAGGCCACCAACAGATTGGGAAAACAAAAATTATGTATTaGGGTGCCCCTGACACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: VIQKILSIRQKGHQQIGKTKIMY*GAPDTS Trigger: GCTTGTGTCAGGGGCACCCAAATACATAATTTTTGT...TTTCCCAATCTGTTGGTGGCCTTTTTGTCTTATTGACAGTATCTTTTGAATTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS TCA 90 bp | CAGACAATGTGTTTTTGCATTTCTCCTCTCAATTCAGAAAGGAATTaGATTCCATGGTCATCATTTGTAACTATTGCTCCTATCCAGTTC | + |
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Preference number: 5 (lower is better) Translates to: QTMCFCISPLNSERN*IPWSSFVTIAPIQF Trigger: GAACTGGATAGGAGCAATAGTTACAAATGATGACCATGGAATTCAATTCCTTTCTGAATTGAGAGGAGAAATGCAAAAACACATTGTCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CAA 90 bp | ACCCAAAGGATAAACCTGCTTAGAAAGATATTAGGGAAACAATATCCTTCAGAAGTCTTCATTGGCATATaGATCTTCTGGACATTTCAC | + |
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Preference number: 5 (lower is better) Translates to: TQRINLLRKILGKQYPSEVFIGI*IFWTFH Trigger: GTGAAATGTCCAGAAGATCAATATGCCAATGAAGAC...TTCTGAAGGATATTGTTTCCCTAATATCTTTCTAAGCAGGTTTATCCTTTGGGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CAA 90 bp | TTCTGTAATTCAAAAGATACTGTCAATAAGACAAAAAGGCCACCAACAGATTGGTCTCCTAGATCATTTTaGGCGTCTTTTATTCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: FCNSKDTVNKTKRPPTDWSPRSF*ASFILQ Trigger: TTGGAGAATAAAAGACGCCAAAAATGATCTAGGAGA...CCAATCTGTTGGTGGCCTTTTTGTCTTATTGACAGTATCTTTTGAATTACAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS-3UTR CAA 90 bp | TTCTGTAATTCAAAAGATACTGTCAATAAGACAAAAAGGCCACCAACAGATTGGAGAAAATTAAATGGTTaGTCTTGGGTGTCACCTTCT | + |
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Preference number: 5 (lower is better) Translates to: FCNSKDTVNKTKRPPTDWRKLNG*SWVSPS Trigger: AGAAGGTGACACCCAAGACAAACCATTTAATTTTCT...CCAATCTGTTGGTGGCCTTTTTGTCTTATTGACAGTATCTTTTGAATTACAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS GCA 72 bp | TCCGTCCCAGCATTTGTTGACCATATGTCTACTTGTTaGAGAAGCATCTCATGCACTGAGTGGGCCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: SVPAFVDHMSTC*RSISCTEWATA Trigger: TGCTGTGGCCCACTCAGTGCATGAGATGCTTCTGCAACAAGTAGACATATGGTCAACAAATGCTGGGACGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS TCA 72 bp | CATGGTGCACACAAAAATTATGTATTTGGGTGCCCCTaGCACAAGCAGCCACCTCATTCTTCCTGGGACAGT | + |
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Preference number: 6 (lower is better) Translates to: HGAHKNYVFGCP*HKQPPHSSWDS Trigger: ACTGTCCCAGGAAGAATGAGGTGGCTGCTTGTGTCAGGGGCACCCAAATACATAATTTTTGTGTGCACCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS CAA 90 bp | GAGGCCAAGATACAGAAAACTTCCACAGCAACCATAGTCTTTCCTTaGGTGCTGTGGTACACAGGGATGAAAGTGATCCAGACACTGCAG | + |
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Preference number: 6 (lower is better) Translates to: EAKIQKTSTATIVFP*VLWYTGMKVIQTLQ Trigger: CTGCAGTGTCTGGATCACTTTCATCCCTGTGTACCACAGCACCAAAGGAAAGACTATGGTTGCTGTGGAAGTTTTCTGTATCTTGGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS GCA 72 bp | GACAGTAGAGGCAGCCACAGTGAATGCAATGGCAAATaGAGTCTGTTGCAGAATACAGATGAACATAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: DSRGSHSECNGK*SLLQNTDEHSG Trigger: CCCACTATGTTCATCTGTATTCTGCAACAGACTGCATTTGCCATTGCATTCACTGTGGCTGCCTCTACTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS GCA 72 bp | ATAACACTTTGGGGCATAAATGCAAAGAAGCAGCCCTaGACTGGAGGCCAAGATACAGAAAACTTCCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: ITLWGINAKKQP*TGGQDTENFHS Trigger: GCTGTGGAAGTTTTCTGTATCTTGGCCTCCAGTGCAGGGCTGCTTCTTTGCATTTATGCCCCAAAGTGTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS CCA 72 bp | TCAGCTGAATCATGGTGCACACAAAAATTATGTATTTaGGTGCCCCTGACACAAGCAGCCACCTCATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SAESWCTQKLCI*VPLTQAATSFF Trigger: GAAGAATGAGGTGGCTGCTTGTGTCAGGGGCACCCAAATACATAATTTTTGTGTGCACCATGATTCAGCTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS CAA 72 bp | ACAAGCAGCCACCTCATTCTTCCTGGGACAGTGATCTaGAATGCCAGTATTACAGTAATCGTTTTGGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: TSSHLILPGTVI*NASITVIVLAK Trigger: CTTGGCCAAAACGATTACTGTAATACTGGCATTCAAGATCACTGTCCCAGGAAGAATGAGGTGGCTGCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS CCA 72 bp | CTAGGGACACCATGGCTAGTGGTAGAGATGTGTCCTTaGGAGATATCTGGTAAAGATGAGGAAATTGTTCAT | + |
|
Preference number: 6 (lower is better) Translates to: LGTPWLVVEMCP*EISGKDEEIVH Trigger: ATGAACAATTTCCTCATCTTTACCAGATATCTCCCAAGGACACATCTCTACCACTAGCCATGGTGTCCCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS TCA 72 bp | GGAGAAGTTCCCAGCCAGATTCCACAGAAAATCAGCTaGATCATGGTGCACACAAAAATTATGTATTTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: GEVPSQIPQKIS*IMVHTKIMYLG Trigger: ACCCAAATACATAATTTTTGTGTGCACCATGATTCAGCTGATTTTCTGTGGAATCTGGCTGGGAACTTCTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS CCA 72 bp | CCACAACTTTTTGGAGGCAGAGTGTTTGGTCTTCATTaGCATATTGATCTTCTGGACATTTCACACACTGAT | + |
|
Preference number: 6 (lower is better) Translates to: PQLFGGRVFGLH*HIDLLDISHTD Trigger: ATCAGTGTGTGAAATGTCCAGAAGATCAATATGCCAATGAAGACCAAACACTCTGCCTCCAAAAAGTTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS CAA 72 bp | CTTCCATGGCAAGATAAACAGAGAAAATTAAATGGTTaGTCTTGGGTGTCACCTTCTTGTCTAGATTCCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LPWQDKQRKLNG*SWVSPSCLDSN Trigger: GTTGGAATCTAGACAAGAAGGTGACACCCAAGACAAACCATTTAATTTTCTCTGTTTATCTTGCCATGGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS CAA 72 bp | TTTTTGGAGGCAGAGTGTTTGGTCTTCATTGGCATATaGATCTTCTGGACATTTCACACACTGATCCATATT | + |
|
Preference number: 6 (lower is better) Translates to: FLEAECLVFIGI*IFWTFHTLIHI Trigger: AATATGGATCAGTGTGTGAAATGTCCAGAAGATCAATATGCCAATGAAGACCAAACACTCTGCCTCCAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS CAA 72 bp | TGTGTCCTTGGGAGATATCTGGTAAAGATGAGGAAATaGTTCATTATCGTTCAGAAGAAGATGAAAATGACC | + |
|
Preference number: 6 (lower is better) Translates to: CVLGRYLVKMRK*FIIVQKKMKMT Trigger: GGTCATTTTCATCTTCTTCTGAACGATAATGAACAATTTCCTCATCTTTACCAGATATCTCCCAAGGACACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS CAA 72 bp | ATTGATCTTCTGGACATTTCACACACTGATCCATATTaGTCATGTTTGAAATTTCATTTTCTGGGCAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: IDLLDISHTDPY*SCLKFHFLGRG Trigger: ACCCCTGCCCAGAAAATGAAATTTCAAACATGACAAATATGGATCAGTGTGTGAAATGTCCAGAAGATCAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS CAA 90 bp | CATTGGCATATTGATCTTCTGGACATTTCACACACTGATCCATATTaGTCATGTTTGAAATTTCATTTTCTGGGCAGGGGTTACAAACAA | + |
|
Preference number: 6 (lower is better) Translates to: HWHIDLLDISHTDPY*SCLKFHFLGRGYKQ Trigger: TTGTTTGTAACCCCTGCCCAGAAAATGAAATTTCAAACATGACAAATATGGATCAGTGTGTGAAATGTCCAGAAGATCAATATGCCAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS TCA 72 bp | CATACTCTGTATCCTGTTTTAAATTCTGGTTCATGTTaGCTAGGTCTCCAGCAGGATTTACAAATTTTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: HTLYPVLNSGSC*LGLQQDLQILR Trigger: CCTTAAAATTTGTAAATCCTGCTGGAGACCTAGTCAACATGAACCAGAATTTAAAACAGGATACAGAGTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS CCA 72 bp | ATACGAAACTCTTTAAGGGCCATGAACTTCTCAGTTTaGATAATAATCGCAACTGATAAACAGACAATGTGT | + |
|
Preference number: 6 (lower is better) Translates to: IRNSLRAMNFSV*IIIATDKQTMC Trigger: ACACATTGTCTGTTTATCAGTTGCGATTATTATCCAAACTGAGAAGTTCATGGCCCTTAAAGAGTTTCGTAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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| CDS TCA 72 bp | TGTTTTTGCATTTCTCCTCTCAATTCAGAAAGGAATTaGATTCCATGGTCATCATTTGTAACTATTGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: CFCISPLNSERN*IPWSSFVTIAP Trigger: AGGAGCAATAGTTACAAATGATGACCATGGAATTCAATTCCTTTCTGAATTGAGAGGAGAAATGCAAAAACA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000167830.3 |
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