RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN2R74 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000090774

Ensembl transcript IDs: ENSMUST00000166355.3, ENSMUST00000232758.2, ENSMUST00000232886.2, ENSMUST00000233635.2

Found 347 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCCACCAAAGAATACACATGGAGGGACTAGTGGCTCCAGTTCCATaGATAGCTATAGATAGCCTGGTCAGACATCAAGGGGCAGAGAGG +
Preference number: 1 (lower is better)
Translates to: THQRIHMEGLVAPVP*IAIDSLVRHQGAER
Trigger: CCTCTCTGCCCCTTGATGTCTGACCAGGCTATCTATAGCTATGCATGGAACTGGAGCCACTAGTCCCTCCATGTGTATTCTTTGGTGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR TCA 90 bp AATATAGCACTTTGGAGCAAAAATGCAAAGAAGCAGCCCTGCACTTaGAGCCAAGATACAGAAAACTTCCACGGCAACCATAGTCTTTCC +
Preference number: 1 (lower is better)
Translates to: NIALWSKNAKKQPCT*SQDTENFHGNHSLS
Trigger: GGAAAGACTATGGTTGCCGTGGAAGTTTTCTGTATCTTGGCTTCAAGTGCAGGGCTGCTTCTTTGCATTTTTGCTCCAAAGTGCTATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR TCA 90 bp TTGTCGGTGGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTaGCAATTCTTCAGAAATTGGATAGTTTTCTACCTAAAGACCCAG +
Preference number: 1 (lower is better)
Translates to: LSVGLSAGPTMWKSV*QFFRNWIVFYLKTQ
Trigger: CTGGGTCTTTAGGTAGAAAACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCCACCGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR TCA 90 bp GCCAAATTCCACAAAGAATCAGCTGAATTATTGTGCATATGGGAATaGTGTATTTGGGTGTGCCTGATTCAAGCAGCCACCTCATTCTTC +
Preference number: 1 (lower is better)
Translates to: AKFHKESAELLCIWE*CIWVCLIQAATSFF
Trigger: GAAGAATGAGGTGGCTGCTTGAATCAGGCACACCCAAATACATCATTCCCATATGCACAATAATTCAGCTGATTCTTTGTGGAATTTGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR TCA 90 bp ACAAATGGAGGAGAAGTTCCCAGCCAAATTCCACAAAGAATCAGCTaGATTATTGTGCATATGGGAATGATGTATTTGGGTGTGCCTGAT +
Preference number: 1 (lower is better)
Translates to: TNGGEVPSQIPQRIS*IIVHMGMMYLGVPD
Trigger: ATCAGGCACACCCAAATACATCATTCCCATATGCACAATAATTCAGCTGATTCTTTGTGGAATTTGGCTGGGAACTTCTCCTCCATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR CCA 90 bp ACTCCATTTTCCCACCTTTGTATGGTTTATACCTGTACTGTGAGGTaGTTTATTTGTTCTTATAAGCAAACCCTCACCCAGATTCTGGTG +
Preference number: 1 (lower is better)
Translates to: TPFSHLCMVYTCTVR*FICSYKQTLTQILV
Trigger: CACCAGAATCTGGGTGAGGGTTTGCTTATAAGAACAAATAAACCACCTCACAGTACAGGTATAAACCATACAAAGGTGGGAAAATGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR TCA 90 bp GAACCACATCCTATCATAAAGATAGAATTCCACAACATTTCTAAGTaGTTGGTCCTCCATTGCTCTGCCTCCTATGCCAAGATATATTCC +
Preference number: 1 (lower is better)
Translates to: EPHPIIKIEFHNISK*LVLHCSASYAKIYS
Trigger: GGAATATATCTTGGCATAGGAGGCAGAGCAATGGAGGACCAATCACTTAGAAATGTTGTGGAATTCTATCTTTATGATAGGATGTGGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR TCA 90 bp ATTAATCATGAGAGGAGATACAGAGACAAAGTGTGGAGCAGAGATTaGAAGAAAGACAATCCAGAGACTTCACTACTTAGTGAACCATCC +
Preference number: 1 (lower is better)
Translates to: INHERRYRDKVWSRD*KKDNPETSLLSEPS
Trigger: GGATGGTTCACTAAGTAGTGAAGTCTCTGGATTGTCTTTCTTTCAATCTCTGCTCCACACTTTGTCTCTGTATCTCCTCTCATGATTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR TCA 90 bp CTTCACACACTGATCCATGTTTGTCATGTTAGAAACTTCATTTTCTaGGCAGGGTTTACAATCAAAACAGCAGATGTCCTTTCCTTCCTG +
Preference number: 1 (lower is better)
Translates to: LHTLIHVCHVRNFIF*AGFTIKTADVLSFL
Trigger: CAGGAAGGAAAGGACATCTGCTGTTTTGATTGTAAACCCTGCTCAGAAAATGAAGTTTCTAACATGACAAACATGGATCAGTGTGTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR CCA 90 bp TTTTTGGAGGCAGACTGTATGGTCTTCATTGGCATATTGATCTTCTaGACACTTCACACACTGATCCATGTTTGTCATGTTAGAAACTTC +
Preference number: 1 (lower is better)
Translates to: FLEADCMVFIGILIF*TLHTLIHVCHVRNF
Trigger: GAAGTTTCTAACATGACAAACATGGATCAGTGTGTGAAGTGTCCAGAAGATCAATATGCCAATGAAGACCATACAGTCTGCCTCCAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR TCA 90 bp CTGAGTCCTGGTCTGCAAGGCATAGTACATATTGAGGGTAGAATCTaGTCAATATCTGTAGCCCACTCTATCATTTCTTTAGACATATAT +
Preference number: 1 (lower is better)
Translates to: LSPGLQGIVHIEGRI*SISVAHSIISLDIY
Trigger: ATATATGTCTAAAGAAATGATAGAGTGGGCTACAGATATTGATCAGATTCTACCCTCAATATGTACTATGCCTTGCAGACCAGGACTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR CCA 90 bp TTTCTTCCAAGGCAAGATAAACAGAGAAAATCAAATGCCTGGTCTTaGGTGTCACCACAAGTATTTGTAAATGATCAGGACCACAGAATA +
Preference number: 1 (lower is better)
Translates to: FLPRQDKQRKSNAWS*VSPQVFVNDQDHRI
Trigger: TATTCTGTGGTCCTGATCATTTACAAATACTTGTGGTGACACCCAAGACCAGGCATTTGATTTTCTCTGTTTATCTTGCCTTGGAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR CCA 90 bp TATTTATTTCTTCCAAGGCAAGATAAACAGAGAAAATCAAATGCCTaGTCTTGGGTGTCACCACAAGTATTTGTAAATGATCAGGACCAC +
Preference number: 1 (lower is better)
Translates to: YLFLPRQDKQRKSNA*SWVSPQVFVNDQDH
Trigger: GTGGTCCTGATCATTTACAAATACTTGTGGTGACACCCAAGACCAGGCATTTGATTTTCTCTGTTTATCTTGCCTTGGAAGAAATAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR GCA 90 bp AACACTCTCATAACCACTAAGGAGTTAGTAGTAGTAAGTAAAAATTaGATAAGCAAATACTTCACAGGGCCAGATGATTTCAAGGGCAAA +
Preference number: 1 (lower is better)
Translates to: NTLITTKELVVVSKN*ISKYFTGPDDFKGK
Trigger: TTTGCCCTTGAAATCATCTGGCCCTGTGAAGTATTTGCTTATGCAATTTTTACTTACTACTACTAACTCCTTAGTGGTTATGAGAGTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR GCA 90 bp TCACACCTGTTGAGAAATAATGATCAATATGGCCATGATTTATTTTaGTGTACTTTCTTATTACCTGGAACAGAATGGCACTGGAATAGC +
Preference number: 1 (lower is better)
Translates to: SHLLRNNDQYGHDLF*CTFLLPGTEWHWNS
Trigger: GCTATTCCAGTGCCATTCTGTTCCAGGTAATAAGAAAGTACAGCAAAATAAATCATGGCCATATTGATCATTATTTCTCAACAGGTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR TCA 90 bp CTTAGAAAAGCCACTATAATTCCATACTGGTCTCATGGTCCCTGGTaGATTATCCATTTATTCAACACTATGTTGAACATGTATTCACAT +
Preference number: 1 (lower is better)
Translates to: LRKATIIPYWSHGPW*IIHLFNTMLNMYSH
Trigger: ATGTGAATACATGTTCAACATAGTGTTGAATAAATGGATAATTCACCAGGGACCATGAGACCAGTATGGAATTATAGTGGCTTTTCTAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAAGAGACTTGGGGCCCTaGAGAAGGGGAAGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRRDLGP*RRGSLL
Trigger: CAGGAGACTTCCCCTTCTCCAGGGCCCCAAGTCTCT...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp AGATGTAGCCACAGTGAACACAATGGCAAATGTGGTCTGCTGCAGGATACAGATTGCAAAAGCATCCCATaGAGTGAGTGGGCCACAGCA +
Preference number: 2 (lower is better)
Translates to: RCSHSEHNGKCGLLQDTDCKSIP*SEWATA
Trigger: TGCTGTGGCCCACTCACTCCATGGGATGCTTTTGCA...ATCTGTATCCTGCAGCAGACCACATTTGCCATTGTGTTCACTGTGGCTACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAGAAGGGGAAGTCTCCTaGGAATGGGGAGCACCTTCT +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEEGEVS*EWGAPS
Trigger: AGAAGGTGCTCCCCATTCCCAGGAGACTTCCCCTTC...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAGAAGGGGAAGTCTCCTaGGAATGGGGAGCACCTTCT +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLREGEVS*EWGAPS
Trigger: AGAAGGTGCTCCCCATTCCCAGGAGACTTCCCCTTC...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAAATCCTGAAGAGACTTaGGGCCCTGGAGAAGGGGAA +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKNPEET*GPGEGE
Trigger: TTCCCCTTCTCCAGGGCCCCAAGTCTCTTCAGGATT...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAACACAGTCAATACTTCTaGCCCAGAACTCTGCCTGTC +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKHSQYF*PRTLPV
Trigger: GACAGGCAGAGTTCTGGGTCAGAAGTATTGACTGTG...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAACAGGAATTCTGGACATaGACAGGTATGGCCCAATGC +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKQEFWT*TGMAQC
Trigger: GCATTGGGCCATACCTGTTCATGTCCAGAATTCCTG...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp AGATGTAGCCACAGTGAACACAATGGCAAATGTGGTCTGCTGCAGGATACAGATACAGAGAAAATCAAATaGCTGGTCTTGGGTGTCACC +
Preference number: 2 (lower is better)
Translates to: RCSHSEHNGKCGLLQDTDTEKIK*LVLGVT
Trigger: GGTGACACCCAAGACCAGGCATTTGATTTTCTCTGT...ATCTGTATCCTGCAGCAGACCACATTTGCCATTGTGTTCACTGTGGCTACATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAGAAGTCTCCTGGGAATaGGGAGCACCTTCTAGGATA +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKEVSWE*GAPSRI
Trigger: TATCCTAGAAGGTGCTCCCCATTCCCAGGAGACTTC...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTAGAGACTTGGGGCCCTaGAGAAGGGGAAGTCTCCTG +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSRDLGP*RRGSLL
Trigger: CAGGAGACTTCCCCTTCTCCAGGGCCCCAAGTCTCT...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAGGTGGGATTGAGTGCTaGTCCAACCATGTGGAAATC +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEGGIEC*SNHVEI
Trigger: GATTTCCACATGGTTGGACCAGCACTCAATCCCACC...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAGACCTCCAGTGGCCCTaGAACTATTCCATGATAAAG +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKDLQWP*NYSMIK
Trigger: CTTTATCATGGAATAGTTTCAGGGCCACTGGAGGTC...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAGACCTCCAGTGGCCCTaGAACTATTCCATGATAAAG +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEDLQWP*NYSMIK
Trigger: CTTTATCATGGAATAGTTTCAGGGCCACTGGAGGTC...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp CTGAGCAGGGTTTACAATCAAAACAGCAGATGTCCTTTCCTTCCTGAGGGGATTTTCGGGTTTCTGGTGTaGAAAAATGAAAGTCCCAGT +
Preference number: 2 (lower is better)
Translates to: LSRVYNQNSRCPFLPEGIFGFLV*KNESPS
Trigger: ACTGGGACTTTCATTTTTTCACACCAGAAACCCGAA...AATCCCCTCAGGAAGGAAAGGACATCTGCTGTTTTGATTGTAAACCCTGCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAGAGCAGAACACTGCCTaGTGTAGAATTAGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEEQNTA*CRISGR
Trigger: TCTGCCACTAATTCTACACCAGGCAGTGTTCTGCTC...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAATGGGTAGAGGGAACTaGAAGAATCCACCTCCAGAA +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRMGRGN*KNPPPE
Trigger: TTCTGGAGGTGGATTCTTCCAGTTCCCTCTACCCAT...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAATGGGTAGAGGGAACTaGAAGAATCCACCTCCAGAA +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKMGRGN*KNPPPE
Trigger: TTCTGGAGGTGGATTCTTCCAGTTCCCTCTACCCAT...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAACCCAGACACAAATGTaGATGCCAACAAGTGCTTGC +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAETQTQM*MPTSAC
Trigger: GCAAGCACTTGTTGGCATCCACATTTGTGTCTGGGT...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAGTCTCTGCTAGTTTCTaGCAAACACAGAGTTGGATG +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRVSASF*QTQSWM
Trigger: CATCCAACTCTGTGTTTGTCAGAAACTAGCAGAGAC...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAACATCAAAAATTCAGGTaGCAGCAGAAGTTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEHQKFR*QQKLAR
Trigger: CCTTGCCAACTTCTGCTGTCACCTGAATTTTTGATG...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAGAGATTTCCACACAATaGAGGCATAGATTATGGGCG +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLREISTQ*RHRLWA
Trigger: CGCCCATAATCTATGCCTTCATTGTGTGGAAATCTC...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTGTATTTGGGTGTGCCTaGTTCAAGCAGCCACCTCAT +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSVFGCA*FKQPPH
Trigger: ATGAGGTGGCTGCTTGAATCAGGCACACCCAAATAC...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAATCAGACTCAGGTTTTTaGTCTAGGTTGCAGCATCTG +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAESDSGF*SRLQHL
Trigger: CAGATGCTGCAACCTAGAGCAAAAACCTGAGTCTGA...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAGTGGATGCCAACAAGTaGTTGCTGATAGATAGGAAC +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKVDANK*LLIDRN
Trigger: GTTCCTATCTATCAGCAAGCACTTGTTGGCATCCAC...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAACTTTGGAGCAAAAATaGAAAGAAGCAGCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKTLEQK*KEAALH
Trigger: GTGCAGGGCTGCTTCTTTGCATTTTTGCTCCAAAGT...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTGAAGTCTCCTGGGAATaGGGAGCACCTTCTAGGATA +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSEVSWE*GAPSRI
Trigger: TATCCTAGAAGGTGCTCCCCATTCCCAGGAGACTTC...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAGACAAAAGCCTAGTATaGTTGCTCTCTGACAGACTC +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKDKSLV*LLSDRL
Trigger: GAGTCTGTCAGAGAGCAACCATACTAGGCTTTTGTC...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGATCCATACTGGTCTCATaGTCCCTGGTGAATTATCCA +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRSILVS*SLVNYP
Trigger: TGGATAATTCACCAGGGACCATGAGACCAGTATGGA...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CAA 90 bp AGAACATCTTCCAAGAGTCAAATTCCAGTTCTTTCCCAGCATTCTTaGACCATGTGTCTACTTGTTGCAAAAGCATCCCATGGAGTGAGT +
Preference number: 2 (lower is better)
Translates to: RTSSKSQIPVLSQHS*TMCLLVAKASHGVS
Trigger: ACTCACTCCATGGGATGCTTTTGCAACAAGTAGACACATGGTCAAAGAATGCTGGGAAAGAACTGGAATTTGACTCTTGGAAGATGTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAAGCTGCCTAGAAGAATaGGAAAACTGCAAAGAATCC +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRSCLEE*ENCKES
Trigger: GGATTCTTTGCAGTTTTCTCATTCTTCTAGGCAGCT...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAAGAGATCTTGATGCATaGAAGGGCTTAGAAAAGCCA +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRRDLDA*KGLEKP
Trigger: TGGCTTTTCTAAGCCCTTTCATGCATCAAGATCTCT...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAGAGTTTGTGTGTTGGTaGATAAGGAATATGGGGAGT +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKEFVCW*IRNMGS
Trigger: ACTCCCCATATTCCTTATTCACCAACACACAAACTC...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACAAGCATCCCATGGAGTaGGTGGGCCACAGCATACAT +
Preference number: 2 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNKHPME*VGHSIH
Trigger: ATGTATGCTGTGGCCCACTCACTCCATGGGATGCTT...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAATTTCCCAGCATTCTTTaGCCATGTGTCTACTTGTTG +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEFPSIL*PCVYLL
Trigger: CAACAAGTAGACACATGGTCAAAGAATGCTGGGAAA...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGATATCTGAGCCACTATTaGACAAGGACAATCATGCCT +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRYLSHY*TRTIMP
Trigger: AGGCATGATTGTCCTTGTGCAATAGTGGCTCAGATA...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAATATCTGAGCCACTATTaGACAAGGACAATCATGCCT +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEYLSHY*TRTIMP
Trigger: AGGCATGATTGTCCTTGTGCAATAGTGGCTCAGATA...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAAGACACAAATGTGGATaGCAACAAGTGCTTGCTGAT +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKRHKCG*QQVLAD
Trigger: ATCAGCAAGCACTTGTTGGCATCCACATTTGTGTCT...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACAATCCTGAAGAGACTTaGGGCCCTGGAGAAGGGGAA +
Preference number: 2 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNNPEET*GPGEGE
Trigger: TTCCCCTTCTCCAGGGCCCCAAGTCTCTTCAGGATT...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTGAGCAGAACACTGCCTaGTGTAGAATTAGTGGCAGA +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSEQNTA*CRISGR
Trigger: TCTGCCACTAATTCTACACCAGGCAGTGTTCTGCTC...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGATGGTGCTGGACTACTTaGTGGTTTGTATGTATGAGA +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRWCWTT*WFVCMR
Trigger: TCTCATACATACAAACCACCAAGTAGTCCAGCACCA...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAAGCATCTTCATTAAATaGTGCTGGACTACTTGGTGG +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKSIFIK*CWTTWW
Trigger: CCACCAAGTAGTCCAGCACCATTTAATGAAGATGCT...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTGGTGACAGCAGAAGTTaGCAAGGATGTGGAGAAAGA +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSGDSRS*QGCGER
Trigger: TCTTTCTCCACATCCTTGCCAACTTCTGCTGTCACC...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAAGAAAATCAAATGCCTaGTCTTGGGTGTCACCACAA +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRRKSNA*SWVSPQ
Trigger: TTGTGGTGACACCCAAGACCAGGCATTTGATTTTCT...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR CAA 90 bp AGTCACAACTTTTTGGAGGCAGACTGTATGGTCTTCATTGGCATATaGATCTTCTGGACACTTCACACACTGATCCATGTTTGTCATGTT +
Preference number: 2 (lower is better)
Translates to: SHNFLEADCMVFIGI*IFWTLHTLIHVCHV
Trigger: AACATGACAAACATGGATCAGTGTGTGAAGTGTCCAGAAGATCAATATGCCAATGAAGACCATACAGTCTGCCTCCAAAAAGTTGTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAATAGTTAGTGATGCTTaGCTGTGCAAAGATTTAGGG +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRIVSDA*LCKDLG
Trigger: CCCTAAATCTTTGCACAGTCAAGCATCACTAACTAT...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAATAGTTAGTGATGCTTaGCTGTGCAAAGATTTAGGG +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKIVSDA*LCKDLG
Trigger: CCCTAAATCTTTGCACAGTCAAGCATCACTAACTAT...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTCTTCACAGGGCCAGATaGTTTCAAGGGCAAAATTCT +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSLHRAR*FQGQNS
Trigger: AGAATTTTGCCCTTGAAATCATCTGGCCCTGTGAAG...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAATTATTTCCCAGGAATTaGAGTGTTCCTTGGAAGCTT +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAELFPRN*SVPWKL
Trigger: AAGCTTCCAAGGAACACTTCAATTCCTGGGAAATAA...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTATTTCCCAGGAATTaGAGTGTTCCTTGGAAGCTT +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKLFPRN*SVPWKL
Trigger: AAGCTTCCAAGGAACACTTCAATTCCTGGGAAATAA...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAATTGCTTTGCTGCAATaGTCAAGTTTTGATAGGCAG +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKIALLQ*SSFDRQ
Trigger: CTGCCTATCAAAACTTGATCATTGCAGCAAAGCAAT...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGATCTTCATTGGCATATTaGTCTTCTGGACACTTCACA +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRSSLAY*SSGHFT
Trigger: TGTGAAGTGTCCAGAAGATCAATATGCCAATGAAGA...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGACCACAAAGAATCAGCTaGATTATTGTGCATATGGGA +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRPQRIS*IIVHMG
Trigger: TCCCATATGCACAATAATTCAGCTGATTCTTTGTGG...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTTCAGACTCAGGTTTTTaGTCTAGGTTGCAGCATCTG +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSSDSGF*SRLQHL
Trigger: CAGATGCTGCAACCTAGAGCAAAAACCTGAGTCTGA...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTGTGGATGCCAACAAGTaGTTGCTGATAGATAGGAAC +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSVDANK*LLIDRN
Trigger: GTTCCTATCTATCAGCAAGCACTTGTTGGCATCCAC...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTATGGGTAGAGGGAACTaGAAGAATCCACCTCCAGAA +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSMGRGN*KNPPPE
Trigger: TTCTGGAGGTGGATTCTTCCAGTTCCCTCTACCCAT...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTTCCATACTGGTCTCATaGTCCCTGGTGAATTATCCA +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSSILVS*SLVNYP
Trigger: TGGATAATTCACCAGGGACCATGAGACCAGTATGGA...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAGGAACAGAATGGCACTaGAATAGCATTGTTTCTGAA +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEGTEWH*NSIVSE
Trigger: TTCAGAAACAATGCTATTCCAGTGCCATTCTGTTCC...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAACAGTTATGCCACTCCTaGATATATACCCAGAATATG +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKQLCHS*IYTQNM
Trigger: CATATTCTGGGTATATATCCAGGAGTGGCATAACTG...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTGGATTTTCTGAGTCCTaGTCTGCAAGGCATAGTACA +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSGFSES*SARHST
Trigger: TGTACTATGCCTTGCAGACCAGGACTCAGAAAATCC...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAACTGTATGGTCTTCATTaGCATATTGATCTTCTGGAC +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAELYGLH*HIDLLD
Trigger: GTCCAGAAGATCAATATGCCAATGAAGACCATACAG...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR CAA 90 bp TTGCTCATTATCACTCAAAGGAAGATGAAAATGACCACAGTAAAGTaGACTTACCTCAGGAATTCTGGACATGAACAGGTATGGCCCAAT +
Preference number: 2 (lower is better)
Translates to: LLIITQRKMKMTTVK*TYLRNSGHEQVWPN
Trigger: ATTGGGCCATACCTGTTCATGTCCAGAATTCCTGAGGTAAGTCAACTTTACTGTGGTCATTTTCATCTTCCTTTGAGTGATAATGAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GAGGAGAAGTTCCCAGCCAAATTCCACAAAGAATCAGCTGAATTATTGTGCATAATAGTTAGTGATGCTTaGCTGTGCAAAGATTTAGGG +
Preference number: 2 (lower is better)
Translates to: EEKFPAKFHKESAELLCIIVSDA*LCKDLG
Trigger: CCCTAAATCTTTGCACAGTCAAGCATCACTAACTAT...TATGCACAATAATTCAGCTGATTCTTTGTGGAATTTGGCTGGGAACTTCTCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTAGCTGCCTAGAAGAATaGGAAAACTGCAAAGAATCC +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSSCLEE*ENCKES
Trigger: GGATTCTTTGCAGTTTTCTCATTCTTCTAGGCAGCT...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGACTACTAGCAGCTGACTaGAACATATGTACATCATTA +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRLLAAD*NICTSL
Trigger: TAATGATGTACATATGTTTCAGTCAGCTGCTAGTAG...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAATTCACATTGAGCAGTaGACTGCAATTCAAACACAA +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEIHIEQ*TAIQTQ
Trigger: TTGTGTTTGAATTGCAGTTCACTGCTCAATGTGAAT...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAATTCACATTGAGCAGTaGACTGCAATTCAAACACAA +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRIHIEQ*TAIQTQ
Trigger: TTGTGTTTGAATTGCAGTTCACTGCTCAATGTGAAT...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAAACATGTATTCACATTaGGCAGTGAACTGCAATTCA +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRNMYSH*AVNCNS
Trigger: TGAATTGCAGTTCACTGCTCAATGTGAATACATGTT...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAAACATGTATTCACATTaGGCAGTGAACTGCAATTCA +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAENMYSH*AVNCNS
Trigger: TGAATTGCAGTTCACTGCTCAATGTGAATACATGTT...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTAGAGATCTTGATGCATaGAAGGGCTTAGAAAAGCCA +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSRDLDA*KGLEKP
Trigger: TGGCTTTTCTAAGCCCTTTCATGCATCAAGATCTCT...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTGAGTTTGTGTGTTGGTaGATAAGGAATATGGGGAGT +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSEFVCW*IRNMGS
Trigger: ACTCCCCATATTCCTTATTCACCAACACACAAACTC...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAATAGTGTGGATACTTTaGTTCTTCTTAGAAGAGGGA +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKIVWIL*FFLEEG
Trigger: TCCCTCTTCTAAGAAGAATCAAAGTATCCACACTAT...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTCATCAAAAATTCAGGTaGCAGCAGAAGTTGGCAAGG +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSHQKFR*QQKLAR
Trigger: CCTTGCCAACTTCTGCTGTCACCTGAATTTTTGATG...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TCCAGTTCTTTCCCAGCATTCTTTGACCATGTGTCTACTTGTTGCAAAAGCATCATTCTGAAAAGGTCTTaGGATTTCCACACAATGAAG +
Preference number: 2 (lower is better)
Translates to: SSSFPAFFDHVSTCCKSIILKRS*DFHTMK
Trigger: CTTCATTGTGTGGAAATCTCAAGACCTTTTCAGAAT...GATGCTTTTGCAACAAGTAGACACATGGTCAAAGAATGCTGGGAAAGAACTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGATATTCAGTGTTCCTTTaGCCCATGTTAAAGTCTACT +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRYSVFL*PMLKST
Trigger: AGTAGACTTTAACATGGGGCAAAGGAACACTGAATA...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATATTCAGTGTTCCTTTaGCCCATGTTAAAGTCTACT +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKYSVFL*PMLKST
Trigger: AGTAGACTTTAACATGGGGCAAAGGAACACTGAATA...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAATCTTCATTAAATGGTaGTGGACTACTTGGTGGTTT +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEIFIKW*WTTWWF
Trigger: AAACCACCAAGTAGTCCAGCACCATTTAATGAAGAT...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAATCTTCATTAAATGGTaGTGGACTACTTGGTGGTTT +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKIFIKW*WTTWWF
Trigger: AAACCACCAAGTAGTCCAGCACCATTTAATGAAGAT...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTTATCTGAGCCACTATTaGACAAGGACAATCATGCCT +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSYLSHY*TRTIMP
Trigger: AGGCATGATTGTCCTTGTGCAATAGTGGCTCAGATA...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTTCAGATCTACACTCATaGAACAATATATGGCCACCC +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSSDLHS*NNIWPP
Trigger: GGGTGGCCATATATTGTTCCATGAGTGTAGATCTGA...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTGACAAAAGCCTAGTATaGTTGCTCTCTGACAGACTC +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSDKSLV*LLSDRL
Trigger: GAGTCTGTCAGAGAGCAACCATACTAGGCTTTTGTC...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAGCAATCACTGATGAGTaGATATTATTTCAGATGCTG +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEAITDE*ILFQML
Trigger: CAGCATCTGAAATAATATCCACTCATCAGTGATTGC...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAGCAATCACTGATGAGTaGATATTATTTCAGATGCTG +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKAITDE*ILFQML
Trigger: CAGCATCTGAAATAATATCCACTCATCAGTGATTGC...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTAAGATAGACAGAGCCTaGAGTTCAGAGACAGGTTTA +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSKIDRA*SSETGL
Trigger: TAAACCTGTCTCTGAACTTCAGGCTCTGTCTATCTT...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTGAGTTTGTGTGTTGGTaGATAAGGAATATGGGGAGT +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSEFVCW*IRNMGS
Trigger: ACTCCCCATATTCCTTATTCACCAACACACAAACTC...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAATCAACCAATGTCTTTaGAACATTGTAGAGATCTTG +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEINQCL*NIVEIL
Trigger: CAAGATCTCTACAATGTTGCAAAGACATTGGTTGAT...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAACTCTATCAATTGCTTTaGTGCAATGATCAAGTTTTG +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKLYQLL*CNDQVL
Trigger: CAAAACTTGATCATTGCAGCAAAGCAATTGATAGAG...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAACTCTATCAATTGCTTTaGTGCAATGATCAAGTTTTG +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAELYQLL*CNDQVL
Trigger: CAAAACTTGATCATTGCAGCAAAGCAATTGATAGAG...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTTATCTGAGCCACTATTaGACAAGGACAATCATGCCT +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSYLSHY*TRTIMP
Trigger: AGGCATGATTGTCCTTGTGCAATAGTGGCTCAGATA...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACTCAGACTCAGGTTTTTaGTCTAGGTTGCAGCATCTG +
Preference number: 2 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNSDSGF*SRLQHL
Trigger: CAGATGCTGCAACCTAGAGCAAAAACCTGAGTCTGA...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAGGATATTATTTCAGATaGTGGGATTCCCAAAGATAT +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEGYYFR*WDSQRY
Trigger: ATATCTTTGGGAATCCCAGCATCTGAAATAATATCC...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTCATGTGTCTACTTGTTaGAAAAGCATCCCATGGAGT +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSHVSTC*KSIPWS
Trigger: ACTCCATGGGATGCTTTTGCAACAAGTAGACACATG...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAATCTTTTACTTAAGGTaGAGAGTCCAAACTGTTACT +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRIFYLR*RVQTVT
Trigger: AGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGAT...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAGCACATTCAAATAACTaGATCTCTCCTTTATCATCA +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEAHSNN*ISPLSS
Trigger: TGATGATAAAGGAGAGATCCAGTTATTTGAATGTGC...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTAACCAAATTTCACTTTaGGATGAGTGCACGTGTGTG +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSNQISL*DECTCV
Trigger: CACACACGTGCACTCATCCCAAAGTGAAATTTGGTT...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAACCTGTACTGTGAGGTaGTTTATTTGTTCTTATAAG +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAETCTVR*FICSYK
Trigger: CTTATAAGAACAAATAAACCACCTCACAGTACAGGT...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAACCTGTACTGTGAGGTaGTTTATTTGTTCTTATAAG +
Preference number: 2 (lower is better)
Translates to: GIECWSNHVEISLTILQKTCTVR*FICSYK
Trigger: CTTATAAGAACAAATAAACCACCTCACAGTACAGGT...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTAGCATCTTCATTAAATaGTGCTGGACTACTTGGTGG +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSSIFIK*CWTTWW
Trigger: CCACCAAGTAGTCCAGCACCATTTAATGAAGATGCT...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAATCATTTTTCCCTGAGTaGCATCTATACATCCTAAAT +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAESFFPE*HLYILN
Trigger: ATTTAGGATGTATAGATGCCACTCAGGGAAAAATGA...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGACAATCATGCCTGTTATaGAGGTACTTTAGTTTAATG +
Preference number: 2 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRQSCLL*RYFSLM
Trigger: CATTAAACTAAAGTACCTCCATAACAGGCATGATTG...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAATCACACCAGTCAAAATaGCTAACATCAAAAATTCAG +
Preference number: 2 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAESHQSK*LTSKIQ
Trigger: CTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGA...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CAA 90 bp CTCTATTCAGTGTTCCTTTGCCCCATGTTAAAGTCTACTCTTAGCTaGTATGCACATTCAAATAACTGGATCTCTCCTTTATCATCAGAT +
Preference number: 2 (lower is better)
Translates to: LYSVFLCPMLKSTLS*YAHSNNWISPLSSD
Trigger: ATCTGATGATAAAGGAGAGATCCAGTTATTTGAATGTGCATACAAGCTAAGAGTAGACTTTAACATGGGGCAAAGGAACACTGAATAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CAA 90 bp GCTGTACTTTCTTATTACCTGGAACAGAATGGCACTGGAATAGCATaGTTTCTGAATCTATTGCAATTATTTTCACTACAGTGTTGCTGG +
Preference number: 2 (lower is better)
Translates to: AVLSYYLEQNGTGIA*FLNLLQLFSLQCCW
Trigger: CCAGCAACACTGTAGTGAAAATAATTGCAATAGATTCAGAAACAATGCTATTCCAGTGCCATTCTGTTCCAGGTAATAAGAAAGTACAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTCTACTAGCAGCTGACTaGAACATATGTACATCATTA +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSLLAAD*NICTSL
Trigger: TAATGATGTACATATGTTTCAGTCAGCTGCTAGTAG...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTTTATTTCCCAGGAATTaGAGTGTTCCTTGGAAGCTT +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSLFPRN*SVPWKL
Trigger: AAGCTTCCAAGGAACACTTCAATTCCTGGGAAATAA...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACCAGTTCCATCTGAAATaGACTACTAAGGACACCATG +
Preference number: 2 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNQFHLK*TTKDTM
Trigger: CATGGTGTCCTTAGTAGTTCATTTCAGATGGAACTG...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTATCTTCATTAAATGGTaGTGGACTACTTGGTGGTTT +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSIFIKW*WTTWWF
Trigger: AAACCACCAAGTAGTCCAGCACCATTTAATGAAGAT...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTGTGAGTATGAATATGTaGCTGTTTCTGTATGTGTTG +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSVSMNM*LFLYVL
Trigger: CAACACATACAGAAACAGCCACATATTCATACTCAC...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTTGCTGGACTACTTGGTaGTTTGTATGTATGAGAATG +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSCWTTW*FVCMRM
Trigger: CATTCTCATACATACAAACCACCAAGTAGTCCAGCA...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACTGGTGCTGGACTACTTaGTGGTTTGTATGTATGAGA +
Preference number: 2 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNWCWTT*WFVCMR
Trigger: TCTCATACATACAAACCACCAAGTAGTCCAGCACCA...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTGGAACAGAATGGCACTaGAATAGCATTGTTTCTGAA +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSGTEWH*NSIVSE
Trigger: TTCAGAAACAATGCTATTCCAGTGCCATTCTGTTCC...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTGCAATCACTGATGAGTaGATATTATTTCAGATGCTG +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSAITDE*ILFQML
Trigger: CAGCATCTGAAATAATATCCACTCATCAGTGATTGC...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTCCTTCAACAATGGAATaGATACAGAAAATGTGGTAC +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSPSTME*IQKMWY
Trigger: GTACCACATTTTCTGTATCCATTCCATTGTTGAAGG...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp ATGAAAGTCCCAGTGGACGCATATAGCAAGAAATCTCCTAGAAATGTGATCATACTACCAGAGAAATGTTaGGTAAAATATGGCAGTTCT +
Preference number: 2 (lower is better)
Translates to: MKVPVDAYSKKSPRNVIILPEKC*VKYGSS
Trigger: AGAACTGCCATATTTTACCCAACATTTCTCTGGTAG...TATGATCACATTTCTAGGAGATTTCTTGCTATATGCGTCCACTGGGACTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTATTCACATTGAGCAGTaGACTGCAATTCAAACACAA +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSIHIEQ*TAIQTQ
Trigger: TTGTGTTTGAATTGCAGTTCACTGCTCAATGTGAAT...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTATCAACCAATGTCTTTaGAACATTGTAGAGATCTTG +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSINQCL*NIVEIL
Trigger: CAAGATCTCTACAATGTTGCAAAGACATTGGTTGAT...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTATCTTTTACTTAAGGTaGAGAGTCCAAACTGTTACT +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSIFYLR*RVQTVT
Trigger: AGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGAT...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTGTGAGTATGAATATGTaGCTGTTTCTGTATGTGTTG +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSVSMNM*LFLYVL
Trigger: CAACACATACAGAAACAGCCACATATTCATACTCAC...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTCAATCATGCCTGTTATaGAGGTACTTTAGTTTAATG +
Preference number: 2 (lower is better)
Translates to: CWSNHVEISLTILQKLDSQSCLL*RYFSLM
Trigger: CATTAAACTAAAGTACCTCCATAACAGGCATGATTG...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CAA 90 bp ATGGCTAATCCAAGTGGTGTCATGAATAACCATTTAAATACAGTTTaGGTGGAACAATTCTTGAGCTTCTTACAATTAGATGGTGGCAAA +
Preference number: 2 (lower is better)
Translates to: MANPSGVMNNHLNTV*VEQFLSFLQLDGGK
Trigger: TTTGCCACCATCTAATTGTAAGAAGCTCAAGAATTGTTCCACCAAAACTGTATTTAAATGGTTATTCATGACACCACTTGGATTAGCCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACCTACTAGCAGCTGACTaGAACATATGTACATCATTA +
Preference number: 2 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNLLAAD*NICTSL
Trigger: TAATGATGTACATATGTTTCAGTCAGCTGCTAGTAG...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR TCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACAACATGTATTCACATTaGGCAGTGAACTGCAATTCA +
Preference number: 2 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNNMYSH*AVNCNS
Trigger: TGAATTGCAGTTCACTGCTCAATGTGAATACATGTT...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTCTCTATCAATTGCTTTaGTGCAATGATCAAGTTTTG +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSLYQLL*CNDQVL
Trigger: CAAAACTTGATCATTGCAGCAAAGCAATTGATAGAG...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR GCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTGGATATTATTTCAGATaGTGGGATTCCCAAAGATAT +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSGYYFR*WDSQRY
Trigger: ATATCTTTGGGAATCCCAGCATCTGAAATAATATCC...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTGCACATTCAAATAACTaGATCTCTCCTTTATCATCA +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSAHSNN*ISPLSS
Trigger: TGATGATAAAGGAGAGATCCAGTTATTTGAATGTGC...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTTCATTTTTCCCTGAGTaGCATCTATACATCCTAAAT +
Preference number: 2 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSSFFPE*HLYILN
Trigger: ATTTAGGATGTATAGATGCCACTCAGGGAAAAATGA...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACCAATCATGCCTGTTATaGAGGTACTTTAGTTTAATG +
Preference number: 2 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNQSCLL*RYFSLM
Trigger: CATTAAACTAAAGTACCTCCATAACAGGCATGATTG...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CCA 72 bp TTAGTGGCAGAATATGTGCCTAATCCTGAAGAGACTTaGGGCCCTGGAGAAGGGGAAGTCTCCTGGGAATGG +
Preference number: 3 (lower is better)
Translates to: LVAEYVPNPEET*GPGEGEVSWEW
Trigger: CCATTCCCAGGAGACTTCCCCTTCTCCAGGGCCCCAAGTCTCTTCAGGATTAGGCACATATTCTGCCACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR GCA 72 bp AGAATACACATGGAGGGACTAGTGGCTCCAGTTCCATaGATAGCTATAGATAGCCTGGTCAGACATCAAGGG +
Preference number: 3 (lower is better)
Translates to: RIHMEGLVAPVP*IAIDSLVRHQG
Trigger: CCCTTGATGTCTGACCAGGCTATCTATAGCTATGCATGGAACTGGAGCCACTAGTCCCTCCATGTGTATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR GCA 72 bp TCTTTCCCAGCATTCTTTGACCATGTGTCTACTTGTTaGAAAAGCATCCCATGGAGTGAGTGGGCCACAGCA +
Preference number: 3 (lower is better)
Translates to: SFPAFFDHVSTC*KSIPWSEWATA
Trigger: TGCTGTGGCCCACTCACTCCATGGGATGCTTTTGCAACAAGTAGACACATGGTCAAAGAATGCTGGGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR TCA 72 bp TCAGAGACAGGTTTACTAACGCACAGTCAATACTTCTaGCCCAGAACTCTGCCTGTCCAAAGAACTGTAGGG +
Preference number: 3 (lower is better)
Translates to: SETGLLTHSQYF*PRTLPVQRTVG
Trigger: CCCTACAGTTCTTTGGACAGGCAGAGTTCTGGGTCAGAAGTATTGACTGTGCGTTAGTAAACCTGTCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR TCA 72 bp AGTGACAGGACAGGGAAGCAGGAGTTTGTGTGTTGGTaGATAAGGAATATGGGGAGTGGACAGGGGATTTTT +
Preference number: 3 (lower is better)
Translates to: SDRTGKQEFVCW*IRNMGSGQGIF
Trigger: AAAAATCCCCTGTCCACTCCCCATATTCCTTATTCACCAACACACAAACTCCTGCTTCCCTGTCCTGTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAGGTATGGCCCAATGCTaGAAGATACTGCCCATAACG +
Preference number: 3 (lower is better)
Translates to: GIECWSNHVEISLTILQKGMAQC*KILPIT
Trigger: CGTTATGGGCAGTATCTTCAAGCATTGGGCCATACC...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR TCA 72 bp ACTGGAAGAATCCACCTCCAGAAGATAGACAGAGCCTaGAGTTCAGAGACAGGTTTACTAACGCACAGTCAA +
Preference number: 3 (lower is better)
Translates to: TGRIHLQKIDRA*SSETGLLTHSQ
Trigger: TTGACTGTGCGTTAGTAAACCTGTCTCTGAACTTCAGGCTCTGTCTATCTTCTGGAGGTGGATTCTTCCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR TCA 72 bp TCTAGGTTGCAGCATCTGACTTACACTCCCTCTGGTTaGTATCTGAGCCACTATTGCACAAGGACAATCATG +
Preference number: 3 (lower is better)
Translates to: SRLQHLTYTPSG*YLSHYCTRTIM
Trigger: CATGATTGTCCTTGTGCAATAGTGGCTCAGATATCAACCAGAGGGAGTGTAAGTCAGATGCTGCAACCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR TCA 72 bp CACAGTAAAGTTGACTTACCTCAGGAATTCTGGACATaGACAGGTATGGCCCAATGCTTGAAGATACTGCCC +
Preference number: 3 (lower is better)
Translates to: HSKVDLPQEFWT*TGMAQCLKILP
Trigger: GGGCAGTATCTTCAAGCATTGGGCCATACCTGTTCATGTCCAGAATTCCTGAGGTAAGTCAACTTTACTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR TCA 72 bp GCCCATGTATCCAAGGACACAGTAGAAGGCAATCACTaGACCTTTGTTGCAAACAATAAGGATGTGGCCATG +
Preference number: 3 (lower is better)
Translates to: AHVSKDTVEGNH*TFVANNKDVAM
Trigger: CATGGCCACATCCTTATTGTTTGCAACAAAGGTTCAGTGATTGCCTTCTACTGTGTCCTTGGATACATGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR GCA 72 bp AAAGCCACAGAAGTAGGATACTCAGACTCAGGTTTTTaGTCTAGGTTGCAGCATCTGACTTACACTCCCTCT +
Preference number: 3 (lower is better)
Translates to: KATEVGYSDSGF*SRLQHLTYTPS
Trigger: AGAGGGAGTGTAAGTCAGATGCTGCAACCTAGAGCAAAAACCTGAGTCTGAGTATCCTACTTCTGTGGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR TCA 72 bp TTCAACCATTGGATTAAAGTCAAGCACCCCCATGGTTaGATTAGGCAAAGGACTGAAGAAGCTGAAGAGGTC +
Preference number: 3 (lower is better)
Translates to: FNHWIKVKHPHG*IRQRTEEAEEV
Trigger: GACCTCTTCAGCTTCTTCAGTCCTTTGCCTAATTCAACCATGGGGGTGCTTGACTTTAATCCAATGGTTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR GCA 72 bp GTACCAAACCCAGACACAAATGTGGATGCCAACAAGTaGTTGCTGATAGATAGGAACCTGTTACACTATCTC +
Preference number: 3 (lower is better)
Translates to: VPNPDTNVDANK*LLIDRNLLHYL
Trigger: GAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATCCACATTTGTGTCTGGGTTTGGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGACTGTTTCTGTATGTGTaGGTGAGTGGGTATGCATGT +
Preference number: 3 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRLFLYV*VSGYAC
Trigger: ACATGCATACCCACTCACCAACACATACAGAAACAG...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAATATCTGAGCCACTATaGCACAAGGACAATCATGCC +
Preference number: 3 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRISEPL*HKDNHA
Trigger: GGCATGATTGTCCTTGTGCAATAGTGGCTCAGATAT...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGATTACACTCCCTCTGGTaGATATCTGAGCCACTATTG +
Preference number: 3 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRLHSLW*ISEPLL
Trigger: CAATAGTGGCTCAGATATCAACCAGAGGGAGTGTAA...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAGCAGGAGTTTGTGTGTaGGTGAATAAGGAATATGGG +
Preference number: 3 (lower is better)
Translates to: GIECWSNHVEISLTILQKAGVCV*VNKEYG
Trigger: CCCATATTCCTTATTCACCAACACACAAACTCCTGC...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAGCAGGAGTTTGTGTGTaGGTGAATAAGGAATATGGG +
Preference number: 3 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEAGVCV*VNKEYG
Trigger: CCCATATTCCTTATTCACCAACACACAAACTCCTGC...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAGCAGGAGTTTGTGTGTaGGTGAATAAGGAATATGGG +
Preference number: 3 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRAGVCV*VNKEYG
Trigger: CCCATATTCCTTATTCACCAACACACAAACTCCTGC...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGACTGACAAACACAGAGTaGGATGTTCATAGCCAACCA +
Preference number: 3 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRLTNTE*DVHSQP
Trigger: TGGTTGGCTATGAACATCCAACTCTGTGTTTGTCAG...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR TCA 72 bp CCAAGAGTCAAATTCCAGTTCTTTCCCAGCATTCTTTaGCCATGTGTCTACTTGTTGCAAAAGCATCCCATG +
Preference number: 3 (lower is better)
Translates to: PRVKFQFFPSIL*PCVYLLQKHPM
Trigger: CATGGGATGCTTTTGCAACAAGTAGACACATGGTCAAAGAATGCTGGGAAAGAACTGGAATTTGACTCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR TCA 72 bp CACAAAGAATCAGCTGAATTATTGTGCATATGGGAATaGTGTATTTGGGTGTGCCTGATTCAAGCAGCCACC +
Preference number: 3 (lower is better)
Translates to: HKESAELLCIWE*CIWVCLIQAAT
Trigger: GGTGGCTGCTTGAATCAGGCACACCCAAATACATCATTCCCATATGCACAATAATTCAGCTGATTCTTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTCGTCAAGCAGTAATGTaGGTGACTTTTCACCAGGAG +
Preference number: 3 (lower is better)
Translates to: CWSNHVEISLTILQKLDSRQAVM*VTFHQE
Trigger: CTCCTGGTGAAAAGTCACCAACATTACTGCTTGACG...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAACTTTCCCAGCATTCTTaGACCATGTGTCTACTTGTT +
Preference number: 3 (lower is better)
Translates to: GIECWSNHVEISLTILQKLSQHS*TMCLLV
Trigger: AACAAGTAGACACATGGTCAAAGAATGCTGGGAAAG...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTGAAGCAGCCCTGCACTaGAAGCCAAGATACAGAAAA +
Preference number: 3 (lower is better)
Translates to: CWSNHVEISLTILQKLDSEAALH*KPRYRK
Trigger: TTTTCTGTATCTTGGCTTCAAGTGCAGGGCTGCTTC...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR CCA 72 bp TCCCACCTTTGTATGGTTTATACCTGTACTGTGAGGTaGTTTATTTGTTCTTATAAGCAAACCCTCACCCAG +
Preference number: 3 (lower is better)
Translates to: SHLCMVYTCTVR*FICSYKQTLTQ
Trigger: CTGGGTGAGGGTTTGCTTATAAGAACAAATAAACCACCTCACAGTACAGGTATAAACCATACAAAGGTGGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CCA 72 bp GCAGACTGTATGGTCTTCATTGGCATATTGATCTTCTaGACACTTCACACACTGATCCATGTTTGTCATGTT +
Preference number: 3 (lower is better)
Translates to: ADCMVFIGILIF*TLHTLIHVCHV
Trigger: AACATGACAAACATGGATCAGTGTGTGAAGTGTCCAGAAGATCAATATGCCAATGAAGACCATACAGTCTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAATCCATTTTCCCACCTTaGTATGGTTTATACCTGTAC +
Preference number: 3 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAESIFPP*YGLYLY
Trigger: GTACAGGTATAAACCATACAAAGGTGGGAAAATGGA...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTTATTTCCCAGGAATaGAAGTGTTCCTTGGAAGCT +
Preference number: 3 (lower is better)
Translates to: GIECWSNHVEISLTILQKFISQE*KCSLEA
Trigger: AGCTTCCAAGGAACACTTCAATTCCTGGGAAATAAA...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAGGCACTGGAATAGCATaGTTTCTGAATCTATTGCAA +
Preference number: 3 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRGTGIA*FLNLLQ
Trigger: TTGCAATAGATTCAGAAACAATGCTATTCCAGTGCC...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTCTGACAAACACAGAGTaGGATGTTCATAGCCAACCA +
Preference number: 3 (lower is better)
Translates to: CWSNHVEISLTILQKLDSLTNTE*DVHSQP
Trigger: TGGTTGGCTATGAACATCCAACTCTGTGTTTGTCAG...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAACATAGTGTGGATACTTaGATTCTTCTTAGAAGAGGG +
Preference number: 3 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEHSVDT*ILLRRG
Trigger: CCCTCTTCTAAGAAGAATCAAAGTATCCACACTATG...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAATATCTGTTGACCACTaGGAAGATGCTCTGAAAATC +
Preference number: 3 (lower is better)
Translates to: GIECWSNHVEISLTILQKISVDH*EDALKI
Trigger: GATTTTCAGAGCATCTTCCAAGTGGTCAACAGATAT...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAGATATATTCCAAGCCTaGATGATGGAGATCTTTTAC +
Preference number: 3 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRDIFQA*MMEIFY
Trigger: GTAAAAGATCTCCATCATCAAGGCTTGGAATATATC...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAGATATATTCCAAGCCTaGATGATGGAGATCTTTTAC +
Preference number: 3 (lower is better)
Translates to: GIECWSNHVEISLTILQKDIFQA*MMEIFY
Trigger: GTAAAAGATCTCCATCATCAAGGCTTGGAATATATC...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTCTGTTTCTGTATGTGTaGGTGAGTGGGTATGCATGT +
Preference number: 3 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSLFLYV*VSGYAC
Trigger: ACATGCATACCCACTCACCAACACATACAGAAACAG...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAATTTTCACTACAGTGTaGCTGGAAAATGTATCTCCA +
Preference number: 3 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRIFTTV*LENVSP
Trigger: TGGAGATACATTTTCCAGCAACACTGTAGTGAAAAT...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAATTTTCACTACAGTGTaGCTGGAAAATGTATCTCCA +
Preference number: 3 (lower is better)
Translates to: GIECWSNHVEISLTILQKIFTTV*LENVSP
Trigger: TGGAGATACATTTTCCAGCAACACTGTAGTGAAAAT...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACCGTCAAGCAGTAATGTaGGTGACTTTTCACCAGGAG +
Preference number: 3 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNRQAVM*VTFHQE
Trigger: CTCCTGGTGAAAAGTCACCAACATTACTGCTTGACG...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TCCAGTTCTTTCCCAGCATTCTTTGACCATGTGTCTACTTGTTGCAAAAGCATCGTTTTCTCATCATGTTaGTCTAGGACACACTCAATA +
Preference number: 3 (lower is better)
Translates to: SSSFPAFFDHVSTCCKSIVFSSC*SRTHSI
Trigger: TATTGAGTGTGTCCTAGACAAACATGATGAGAAAAC...GATGCTTTTGCAACAAGTAGACACATGGTCAAAGAATGCTGGGAAAGAACTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR TCA 72 bp TTCTATCACACCTTCAAAGAAGACCTCCAGTGGCCCTaGAACTATTCCATGATAAAGAAACAGAAAGTACAC +
Preference number: 3 (lower is better)
Translates to: FYHTFKEDLQWP*NYSMIKKQKVH
Trigger: GTGTACTTTCTGTTTCTTTATCATGGAATAGTTTCAGGGCCACTGGAGGTCTTCTTTGAAGGTGTGATAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CCA 72 bp AGGCAAGATAAACAGAGAAAATCAAATGCCTGGTCTTaGGTGTCACCACAAGTATTTGTAAATGATCAGGAC +
Preference number: 3 (lower is better)
Translates to: RQDKQRKSNAWS*VSPQVFVNDQD
Trigger: GTCCTGATCATTTACAAATACTTGTGGTGACACCCAAGACCAGGCATTTGATTTTCTCTGTTTATCTTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTTCCTGGAAAAAGTATTaGAGTATGCTGAAGGTTGTG +
Preference number: 3 (lower is better)
Translates to: CWSNHVEISLTILQKLDSSWKKY*SMLKVV
Trigger: CACAACCTTCAGCATACTCAAATACTTTTTCCAGGA...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTGAATTGAAGTGTTCCTaGGAAGCTTCACAGCATAAA +
Preference number: 3 (lower is better)
Translates to: CWSNHVEISLTILQKLDSELKCS*EASQHK
Trigger: TTTATGCTGTGAAGCTTCCAAGGAACACTTCAATTC...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTTTTATTTCCCAGGAATaGAAGTGTTCCTTGGAAGCT +
Preference number: 3 (lower is better)
Translates to: CWSNHVEISLTILQKLDSFISQE*KCSLEA
Trigger: AGCTTCCAAGGAACACTTCAATTCCTGGGAAATAAA...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACATATCTGAGCCACTATaGCACAAGGACAATCATGCC +
Preference number: 3 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNISEPL*HKDNHA
Trigger: GGCATGATTGTCCTTGTGCAATAGTGGCTCAGATAT...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTCATAGTGTGGATACTTaGATTCTTCTTAGAAGAGGG +
Preference number: 3 (lower is better)
Translates to: CWSNHVEISLTILQKLDSHSVDT*ILLRRG
Trigger: CCCTCTTCTAAGAAGAATCAAAGTATCCACACTATG...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp ATGAAAGTCCCAGTGGACGCATATAGCAAGAAATCTCCTAGAAATGTGATCATAACTACCAGAGAAATGTaGGGTAAAATATGGCAGTTC +
Preference number: 3 (lower is better)
Translates to: MKVPVDAYSKKSPRNVIITTREM*GKIWQF
Trigger: GAACTGCCATATTTTACCCAACATTTCTCTGGTAGT...TATGATCACATTTCTAGGAGATTTCTTGCTATATGCGTCCACTGGGACTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR TCA 72 bp GCCACTATAATTCCATACTGGTCTCATGGTCCCTGGTaGATTATCCATTTATTCAACACTATGTTGAACATG +
Preference number: 3 (lower is better)
Translates to: ATIIPYWSHGPW*IIHLFNTMLNM
Trigger: CATGTTCAACATAGTGTTGAATAAATGGATAATTCACCAGGGACCATGAGACCAGTATGGAATTATAGTGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR TCA 72 bp GGTCTGCAAGGCATAGTACATATTGAGGGTAGAATCTaGTCAATATCTGTAGCCCACTCTATCATTTCTTTA +
Preference number: 3 (lower is better)
Translates to: GLQGIVHIEGRI*SISVAHSIISL
Trigger: TAAAGAAATGATAGAGTGGGCTACAGATATTGATCAGATTCTACCCTCAATATGTACTATGCCTTGCAGACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR GCA 72 bp CAATCATGCCTGTTATGGAGGTACTTTAGTTTAATGTaGACTCTAAAACGTCAAGCAGTAATGTTGGTGACT +
Preference number: 3 (lower is better)
Translates to: QSCLLWRYFSLM*TLKRQAVMLVT
Trigger: AGTCACCAACATTACTGCTTGACGTTTTAGAGTGCACATTAAACTAAAGTACCTCCATAACAGGCATGATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CCA 72 bp CTTGAACCTGGAGAAGACCTAGATGTCCTTCAACAATaGAATGGATACAGAAAATGTGGTACATTTAAATCC +
Preference number: 3 (lower is better)
Translates to: LEPGEDLDVLQQ*NGYRKCGTFKS
Trigger: GGATTTAAATGTACCACATTTTCTGTATCCATTCCATTGTTGAAGGACATCTAGGTCTTCTCCAGGTTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CCA 72 bp CTTCCAAGGCAAGATAAACAGAGAAAATCAAATGCCTaGTCTTGGGTGTCACCACAAGTATTTGTAAATGAT +
Preference number: 3 (lower is better)
Translates to: LPRQDKQRKSNA*SWVSPQVFVND
Trigger: ATCATTTACAAATACTTGTGGTGACACCCAAGACCAGGCATTTGATTTTCTCTGTTTATCTTGCCTTGGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR CCA 72 bp GCAATCACTGAACCTTTGTTGCAAACAATAAGGATGTaGCCATGTACCATATGTAGATCAGCATCAACAAAT +
Preference number: 3 (lower is better)
Translates to: AITEPLLQTIRM*PCTICRSASTN
Trigger: ATTTGTTGATGCTGATCTACATATGGTACATGGCCACATCCTTATTGTTTGCAACAAAGGTTCAGTGATTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTGATATATTCCAAGCCTaGATGATGGAGATCTTTTAC +
Preference number: 3 (lower is better)
Translates to: CWSNHVEISLTILQKLDSDIFQA*MMEIFY
Trigger: GTAAAAGATCTCCATCATCAAGGCTTGGAATATATC...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp ATGAAAGTCCCAGTGGACGCATATAGCAAGAAATCTCCTAGAAATGTGATCATAGATATATTCCAAGCCTaGATGATGGAGATCTTTTAC +
Preference number: 3 (lower is better)
Translates to: MKVPVDAYSKKSPRNVIIDIFQA*MMEIFY
Trigger: GTAAAAGATCTCCATCATCAAGGCTTGGAATATATC...TATGATCACATTTCTAGGAGATTTCTTGCTATATGCGTCCACTGGGACTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTGGCACTGGAATAGCATaGTTTCTGAATCTATTGCAA +
Preference number: 3 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSGTGIA*FLNLLQ
Trigger: TTGCAATAGATTCAGAAACAATGCTATTCCAGTGCC...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTAGACATATATATCTGTaGACCACTTGGAAGATGCTC +
Preference number: 3 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSRHIYL*TTWKML
Trigger: GAGCATCTTCCAAGTGGTCAACAGATATATATGTCT...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACGTCTTCATTGGCATATaGATCTTCTGGACACTTCAC +
Preference number: 3 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNVFIGI*IFWTLH
Trigger: GTGAAGTGTCCAGAAGATCAATATGCCAATGAAGAC...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR TCA 72 bp CATTTTCCCACCTTTGTATGGTTTATACCTGTACTGTaGGGTGGTTTATTTGTTCTTATAAGCAAACCCTCA +
Preference number: 3 (lower is better)
Translates to: HFPTFVWFIPVL*GGLFVLISKPS
Trigger: TGAGGGTTTGCTTATAAGAACAAATAAACCACCTCACAGTACAGGTATAAACCATACAAAGGTGGGAAAATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR TCA 72 bp CAGATCTACTGTACTCAACTTTCAGCAAAGGTCACGTaGTCCCAGAAATTTACAGCTAACAAGATAATGAAT +
Preference number: 3 (lower is better)
Translates to: QIYCTQLSAKVT*SQKFTANKIMN
Trigger: ATTCATTATCTTGTTAGCTGTAAATTTCTGGGATCACGTGACCTTTGCTGAAAGTTGAGTACAGTAGATCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CCA 72 bp GAAAGCATCTTCATTAAATGGTGCTGGACTACTTGGTaGTTTGTATGTATGAGAATGAGAAAAGATCCTTCT +
Preference number: 3 (lower is better)
Translates to: ESIFIKWCWTTW*FVCMRMRKDPS
Trigger: AGAAGGATCTTTTCTCATTCTCATACATACAAACCACCAAGTAGTCCAGCACCATTTAATGAAGATGCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTGAACCAATGATTTACTaGAAAGGCACAGGCATTTTA +
Preference number: 3 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSEPMIY*KGTGIL
Trigger: TAAAATGCCTGTGCCTTTCAAGTAAATCATTGGTTC...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACTCCTGGAAAAAGTATTaGAGTATGCTGAAGGTTGTG +
Preference number: 3 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNSWKKY*SMLKVV
Trigger: CACAACCTTCAGCATACTCAAATACTTTTTCCAGGA...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTGGATCAGGTAAAATATaGAAACACTCTCATAACCAC +
Preference number: 3 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSGSGKI*KHSHNH
Trigger: GTGGTTATGAGAGTGTTTCAATATTTTACCTGATCC...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTCTTAAGAACTCCATGTaGACACAAATCTTCTCTCAT +
Preference number: 3 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSLKNSM*TQIFSH
Trigger: ATGAGAGAAGATTTGTGTCAACATGGAGTTCTTAAG...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACTTTATTTCCCAGGAATaGAAGTGTTCCTTGGAAGCT +
Preference number: 3 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNFISQE*KCSLEA
Trigger: AGCTTCCAAGGAACACTTCAATTCCTGGGAAATAAA...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACGGCACTGGAATAGCATaGTTTCTGAATCTATTGCAA +
Preference number: 3 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNGTGIA*FLNLLQ
Trigger: TTGCAATAGATTCAGAAACAATGCTATTCCAGTGCC...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTAACAACCTCTATCAATaGCTTTGCTGCAATGATCAA +
Preference number: 3 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSNNLYQ*LCCNDQ
Trigger: TTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTT...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTGATTCTGAAAAGGTCTaGAGATTTCCACACAATGAA +
Preference number: 3 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSDSEKV*RFPHNE
Trigger: TTCATTGTGTGGAAATCTCAAGACCTTTTCAGAATC...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACCTTAAGAACTCCATGTaGACACAAATCTTCTCTCAT +
Preference number: 3 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNLKNSM*TQIFSH
Trigger: ATGAGAGAAGATTTGTGTCAACATGGAGTTCTTAAG...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACAACAACCTCTATCAATaGCTTTGCTGCAATGATCAA +
Preference number: 3 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNNNLYQ*LCCNDQ
Trigger: TTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTT...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR-3UTR CAA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACATTCACTACTGTAGTTaGAAGGGTGTATTCTTTGGA +
Preference number: 3 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNIHYCS*KGVFFG
Trigger: TCCAAAGAATACACCCTTCAAACTACAGTAGTGAAT...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR CCA 72 bp ATAGATTATTCAGATCTACACTCATGGAACAATATATaGCCACCCTGTATTTTGTCCATGAGAATGACACAA +
Preference number: 3 (lower is better)
Translates to: IDYSDLHSWNNI*PPCILSMRMTQ
Trigger: TTGTGTCATTCTCATGGACAAAATACAGGGTGGCCATATATTGTTCCATGAGTGTAGATCTGAATAATCTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CCA 72 bp ACAAAAGAACACATAGAGTATGCAATCACTGATGAGTaGATATTATTTCAGATGCTGGGATTCCCAAAGATA +
Preference number: 3 (lower is better)
Translates to: TKEHIEYAITDE*ILFQMLGFPKI
Trigger: TATCTTTGGGAATCCCAGCATCTGAAATAATATCCACTCATCAGTGATTGCATACTCTATGTGTTCTTTTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CCA 72 bp GGTGGAACAATTCTTGAGCTTCTTACAATTAGATGGTaGCAAAGAACATCTAAAATATGTCCACCATTGTTT +
Preference number: 3 (lower is better)
Translates to: GGTILELLTIRW*QRTSKICPPLF
Trigger: AAACAATGGTGGACATATTTTAGATGTTCTTTGCCACCATCTAATTGTAAGAAGCTCAAGAATTGTTCCACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR CCA 72 bp TTTGGTGGAACAATTCTTGAGCTTCTTACAATTAGATaGTGGCAAAGAACATCTAAAATATGTCCACCATTG +
Preference number: 3 (lower is better)
Translates to: FGGTILELLTIR*WQRTSKICPPL
Trigger: CAATGGTGGACATATTTTAGATGTTCTTTGCCACCATCTAATTGTAAGAAGCTCAAGAATTGTTCCACCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR TCA 72 bp GTCATTAGAGGTATCAAAATGTCTGATTACACAGTTTaGTCCAATAAACTGAAGTCCATATCATGTGTTAGG +
Preference number: 3 (lower is better)
Translates to: VIRGIKMSDYTV*SNKLKSISCVR
Trigger: CCTAACACATGATATGGACTTCAGTTTATTGGATCAAACTGTGTAATCAGACATTTTGATACCTCTAATGAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR TCA 72 bp TGTTTTGATAATTCACTATGTATAGTTAGTGATGCTTaGCTGTGCAAAGATTTAGGGCGATTTACTAGACAG +
Preference number: 3 (lower is better)
Translates to: CFDNSLCIVSDA*LCKDLGRFTRQ
Trigger: CTGTCTAGTAAATCGCCCTAAATCTTTGCACAGTCAAGCATCACTAACTATACATAGTGAATTATCAAAACA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR TCA 72 bp AGTACACTAATTCATTCTATGAGGCCACAGTTACTCTaGTACATAAATCACACAAATACCCAAGAAAGAAAG +
Preference number: 3 (lower is better)
Translates to: STLIHSMRPQLL*YINHTNTQERK
Trigger: CTTTCTTTCTTGGGTATTTGTGTGATTTATGTATCAGAGTAACTGTGGCCTCATAGAATGAATTAGTGTACT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR GCA 72 bp ATAACCACTAAGGAGTTAGTAGTAGTAAGTAAAAATTaGATAAGCAAATACTTCACAGGGCCAGATGATTTC +
Preference number: 3 (lower is better)
Translates to: ITTKELVVVSKN*ISKYFTGPDDF
Trigger: GAAATCATCTGGCCCTGTGAAGTATTTGCTTATGCAATTTTTACTTACTACTACTAACTCCTTAGTGGTTAT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CCA 72 bp TTATTTTGCTGTACTTTCTTATTACCTGGAACAGAATaGCACTGGAATAGCATTGTTTCTGAATCTATTGCA +
Preference number: 3 (lower is better)
Translates to: LFCCTFLLPGTE*HWNSIVSESIA
Trigger: TGCAATAGATTCAGAAACAATGCTATTCCAGTGCCATTCTGTTCCAGGTAATAAGAAAGTACAGCAAAATAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
CDS-3UTR TCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAACCTGAGGGGATTTTCTaGGTCCTGGTCTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEPEGIF*VLVCKA
Trigger: TGCCTTGCAGACCAGGACTCAGAAAATCCCCTCAGG...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAAAGCATCCCATGGAGTaGGTGGGCCACAGCATACAT +
Preference number: 4 (lower is better)
Translates to: GIECWSNHVEISLTILQKKHPME*VGHSIH
Trigger: ATGTATGCTGTGGCCCACTCACTCCATGGGATGCTT...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAATCCCATGGAGTGAGTaGGCCACAGCATACATAGCG +
Preference number: 4 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEIPWSE*ATAYIA
Trigger: CGCTATGTATGCTGTGGCCCACTCACTCCATGGGAT...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGACAGGAATTCTGGACATaGACAGGTATGGCCCAATGC +
Preference number: 4 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRQEFWT*TGMAQC
Trigger: GCATTGGGCCATACCTGTTCATGTCCAGAATTCCTG...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAGTATTTGGGTGTGCCTaGTTCAAGCAGCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRVFGCA*FKQPPH
Trigger: ATGAGGTGGCTGCTTGAATCAGGCACACCCAAATAC...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp CAAGCCTTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTATCCCATGGAGTGAGTaGGCCACAGCATACATAGCG +
Preference number: 4 (lower is better)
Translates to: QALMMEIFYLRWRVQTVTIPWSE*ATAYIA
Trigger: CGCTATGTATGCTGTGGCCCACTCACTCCATGGGAT...AGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAAGGCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
3UTR CAA 72 bp GACTTACACTCCCTCTGGTTGATATCTGAGCCACTATaGCACAAGGACAATCATGCCTGTTATGGAGGTACT +
Preference number: 4 (lower is better)
Translates to: DLHSLWLISEPL*HKDNHACYGGT
Trigger: AGTACCTCCATAACAGGCATGATTGTCCTTGTGCAATAGTGGCTCAGATATCAACCAGAGGGAGTGTAAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
CDS-3UTR TCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTCCTGAGGGGATTTTCTaGGTCCTGGTCTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSPEGIF*VLVCKA
Trigger: TGCCTTGCAGACCAGGACTCAGAAAATCCCCTCAGG...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAATGTCCTTTCCTTCCTaGGGGGATTTTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRMSFPS*GDFLSP
Trigger: AGGACTCAGAAAATCCCCTCAGGAAGGAAAGGACAT...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp CAAGCCTTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTGTATTTGGGTGTGCCTaGTTCAAGCAGCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: QALMMEIFYLRWRVQTVTVFGCA*FKQPPH
Trigger: ATGAGGTGGCTGCTTGAATCAGGCACACCCAAATAC...AGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAAGGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAAAGCAGCCCTGCACTTaGAGCCAAGATACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRKQPCT*SQDTEN
Trigger: GTTTTCTGTATCTTGGCTTCAAGTGCAGGGCTGCTT...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAAAGCAGCCCTGCACTTaGAGCCAAGATACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEKQPCT*SQDTEN
Trigger: GTTTTCTGTATCTTGGCTTCAAGTGCAGGGCTGCTT...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR GCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAGCAAATGTGGTCTGCTaGAGGATACAGATGGCCATA +
Preference number: 4 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEANVVC*RIQMAI
Trigger: TATGGCCATCTGTATCCTGCAGCAGACCACATTTGC...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR GCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAGCAAATGTGGTCTGCTaGAGGATACAGATGGCCATA +
Preference number: 4 (lower is better)
Translates to: GIECWSNHVEISLTILQKANVVC*RIQMAI
Trigger: TATGGCCATCTGTATCCTGCAGCAGACCACATTTGC...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTTGCAAAAGCATCCCATaGAGTGAGTGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: CWSNHVEISLTILQKLDSCKSIP*SEWATA
Trigger: TGCTGTGGCCCACTCACTCCATGGGATGCTTTTGCA...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
3UTR CAA 72 bp CCAAACCCAGACACAAATGTGGATGCCAACAAGTGCTaGCTGATAGATAGGAACCTGTTACACTATCTCCTT +
Preference number: 4 (lower is better)
Translates to: PNPDTNVDANKC*LIDRNLLHYLL
Trigger: AAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATCCACATTTGTGTCTGGGTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
CDS-3UTR TCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTAAGCATCCCATGGAGTaGGTGGGCCACAGCATACAT +
Preference number: 4 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSKHPME*VGHSIH
Trigger: ATGTATGCTGTGGCCCACTCACTCCATGGGATGCTT...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp TTCCTTTGCCCCATGTTAAAGTCTACTCTTAGCTTGTATGCACATTCAAATAACAAGCATCCCATGGAGTaGGTGGGCCACAGCATACAT +
Preference number: 4 (lower is better)
Translates to: FLCPMLKSTLSLYAHSNNKHPME*VGHSIH
Trigger: ATGTATGCTGTGGCCCACTCACTCCATGGGATGCTT...GTTATTTGAATGTGCATACAAGCTAAGAGTAGACTTTAACATGGGGCAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACCCTGAGGGGATTTTCTaGGTCCTGGTCTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNPEGIF*VLVCKA
Trigger: TGCCTTGCAGACCAGGACTCAGAAAATCCCCTCAGG...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp CAAGCCTTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTAAGCAGCCCTGCACTTaGAGCCAAGATACAGAAAAC +
Preference number: 4 (lower is better)
Translates to: QALMMEIFYLRWRVQTVTKQPCT*SQDTEN
Trigger: GTTTTCTGTATCTTGGCTTCAAGTGCAGGGCTGCTT...AGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAAGGCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR GCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGAACTTTGGAGCAAAAATaGAAAGAAGCAGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRTLEQK*KEAALH
Trigger: GTGCAGGGCTGCTTCTTTGCATTTTTGCTCCAAAGT...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATCAAATGCCTGGTCTTaGGTGTCACCTTCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: GIECWSNHVEISLTILQKSNAWS*VSPSCL
Trigger: TAGACAAGAAGGTGACACCCAAGACCAGGCATTTGA...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGATCAAATGCCTGGTCTTaGGTGTCACCTTCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRSNAWS*VSPSCL
Trigger: TAGACAAGAAGGTGACACCCAAGACCAGGCATTTGA...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTTGCAAAAGCATCCCATaGAGTGAGTGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSCKSIP*SEWATA
Trigger: TGCTGTGGCCCACTCACTCCATGGGATGCTTTTGCA...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp TTCCTTTGCCCCATGTTAAAGTCTACTCTTAGCTTGTATGCACATTCAAATAACTGCAAAAGCATCCCATaGAGTGAGTGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: FLCPMLKSTLSLYAHSNNCKSIP*SEWATA
Trigger: TGCTGTGGCCCACTCACTCCATGGGATGCTTTTGCA...GTTATTTGAATGTGCATACAAGCTAAGAGTAGACTTTAACATGGGGCAAAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAGGATTTTCTGAGTCCTaGTCTGCAAGGCATAGTACA +
Preference number: 4 (lower is better)
Translates to: GIECWSNHVEISLTILQKGFSES*SARHST
Trigger: TGTACTATGCCTTGCAGACCAGGACTCAGAAAATCC...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAGGATTTTCTGAGTCCTaGTCTGCAAGGCATAGTACA +
Preference number: 4 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEGFSES*SARHST
Trigger: TGTACTATGCCTTGCAGACCAGGACTCAGAAAATCC...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp TTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTCTTTGTCAGGAATTCTGGACATaGACAGGTATGGCCCAATGC +
Preference number: 4 (lower is better)
Translates to: LMMEIFYLRWRVQTVTLCQEFWT*TGMAQC
Trigger: GCATTGGGCCATACCTGTTCATGTCCAGAATTCCTG...ACAAAGAGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp TTCCTTTGCCCCATGTTAAAGTCTACTCTTAGCTTGTATGCACATTCAAATAACCAGGAATTCTGGACATaGACAGGTATGGCCCAATGC +
Preference number: 4 (lower is better)
Translates to: FLCPMLKSTLSLYAHSNNQEFWT*TGMAQC
Trigger: GCATTGGGCCATACCTGTTCATGTCCAGAATTCCTG...GTTATTTGAATGTGCATACAAGCTAAGAGTAGACTTTAACATGGGGCAAAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGACAGTTCCATCTGAAATaGACTACTAAGGACACCATG +
Preference number: 4 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRQFHLK*TTKDTM
Trigger: CATGGTGTCCTTAGTAGTTCATTTCAGATGGAACTG...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGATTTCCCAGCATTCTTTaGCCATGTGTCTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRFPSIL*PCVYLL
Trigger: CAACAAGTAGACACATGGTCAAAGAATGCTGGGAAA...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp CAAGCCTTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTAGAACACCAACATGCTaGATGTCAAGAGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: QALMMEIFYLRWRVQTVTRTPTC*MSRAWL
Trigger: AAGCCAAGCTCTTGACATTCAGCATGTTGGTGTTCT...AGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAAGGCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR GCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGACATGTGTCTACTTGTTaGAAAAGCATCCCATGGAGT +
Preference number: 4 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRHVSTC*KSIPWS
Trigger: ACTCCATGGGATGCTTTTGCAACAAGTAGACACATG...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACATCCCATGGAGTGAGTaGGCCACAGCATACATAGCG +
Preference number: 4 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNIPWSE*ATAYIA
Trigger: CGCTATGTATGCTGTGGCCCACTCACTCCATGGGAT...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAACCTCATTCTTCTTCCTaGGACAGTTATCTTGAATGC +
Preference number: 4 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEPHSSS*DSYLEC
Trigger: GCATTCAAGATAACTGTCCCAGGAAGAAGAATGAGG...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGACCTCATTCTTCTTCCTaGGACAGTTATCTTGAATGC +
Preference number: 4 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRPHSSS*DSYLEC
Trigger: GCATTCAAGATAACTGTCCCAGGAAGAAGAATGAGG...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
3UTR CAA 72 bp TCCAAGAGTCAAATTCCAGTTCTTTCCCAGCATTCTTaGACCATGTGTCTACTTGTTGCAAAAGCATCCCAT +
Preference number: 4 (lower is better)
Translates to: SKSQIPVLSQHS*TMCLLVAKASH
Trigger: ATGGGATGCTTTTGCAACAAGTAGACACATGGTCAAAGAATGCTGGGAAAGAACTGGAATTTGACTCTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR CAA 72 bp TTTTTGGAGGCAGACTGTATGGTCTTCATTGGCATATaGATCTTCTGGACACTTCACACACTGATCCATGTT +
Preference number: 4 (lower is better)
Translates to: FLEADCMVFIGI*IFWTLHTLIHV
Trigger: AACATGGATCAGTGTGTGAAGTGTCCAGAAGATCAATATGCCAATGAAGACCATACAGTCTGCCTCCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
3UTR CAA 72 bp AGCAGCCACCTCATTCTTCTTCCTGGGACAGTTATCTaGAATGCCAGTATTACAATAACTGTCTTAGACAAG +
Preference number: 4 (lower is better)
Translates to: SSHLILLPGTVI*NASITITVLDK
Trigger: CTTGTCTAAGACAGTTATTGTAATACTGGCATTCAAGATAACTGTCCCAGGAAGAAGAATGAGGTGGCTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
CDS-3UTR TCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTATGTCCTTTCCTTCCTaGGGGGATTTTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSMSFPS*GDFLSP
Trigger: AGGACTCAGAAAATCCCCTCAGGAAGGAAAGGACAT...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp TTCCTTTGCCCCATGTTAAAGTCTACTCTTAGCTTGTATGCACATTCAAATAACATGTCCTTTCCTTCCTaGGGGGATTTTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: FLCPMLKSTLSLYAHSNNMSFPS*GDFLSP
Trigger: AGGACTCAGAAAATCCCCTCAGGAAGGAAAGGACAT...GTTATTTGAATGTGCATACAAGCTAAGAGTAGACTTTAACATGGGGCAAAGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATCTTCATTGGCATATTaGTCTTCTGGACACTTCACA +
Preference number: 4 (lower is better)
Translates to: GIECWSNHVEISLTILQKSSLAY*SSGHFT
Trigger: TGTGAAGTGTCCAGAAGATCAATATGCCAATGAAGA...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACGTATTTGGGTGTGCCTaGTTCAAGCAGCCACCTCAT +
Preference number: 4 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNVFGCA*FKQPPH
Trigger: ATGAGGTGGCTGCTTGAATCAGGCACACCCAAATAC...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTAGAACACCAACATGCTaGATGTCAAGAGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: CWSNHVEISLTILQKLDSRTPTC*MSRAWL
Trigger: AAGCCAAGCTCTTGACATTCAGCATGTTGGTGTTCT...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAACTGTATGGTCTTCATTaGCATATTGATCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: GIECWSNHVEISLTILQKLYGLH*HIDLLD
Trigger: GTCCAGAAGATCAATATGCCAATGAAGACCATACAG...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTCAGTTCCATCTGAAATaGACTACTAAGGACACCATG +
Preference number: 4 (lower is better)
Translates to: CWSNHVEISLTILQKLDSQFHLK*TTKDTM
Trigger: CATGGTGTCCTTAGTAGTTCATTTCAGATGGAACTG...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp TTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTCTTTGTGAGATTTCCACACAATaGAGGCATAGATTATGGGCG +
Preference number: 4 (lower is better)
Translates to: LMMEIFYLRWRVQTVTLCEISTQ*RHRLWA
Trigger: CGCCCATAATCTATGCCTTCATTGTGTGGAAATCTC...ACAAAGAGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp CAAGCCTTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTCCACAAAGAATCAGCTaGATTATTGTGCATATGGGA +
Preference number: 4 (lower is better)
Translates to: QALMMEIFYLRWRVQTVTPQRIS*IIVHMG
Trigger: TCCCATATGCACAATAATTCAGCTGATTCTTTGTGG...AGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAAGGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR GCA 90 bp TTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTCTTTGTACAGAGAAAATCAAATaGCTGGTCTTGGGTGTCACC +
Preference number: 4 (lower is better)
Translates to: LMMEIFYLRWRVQTVTLCTEKIK*LVLGVT
Trigger: GGTGACACCCAAGACCAGGCATTTGATTTTCTCTGT...ACAAAGAGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR GCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTACAGAGAAAATCAAATaGCTGGTCTTGGGTGTCACC +
Preference number: 4 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSTEKIK*LVLGVT
Trigger: GGTGACACCCAAGACCAGGCATTTGATTTTCTCTGT...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR GCA 90 bp TTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTCTTTGTACTTTGGAGCAAAAATaGAAAGAAGCAGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LMMEIFYLRWRVQTVTLCTLEQK*KEAALH
Trigger: GTGCAGGGCTGCTTCTTTGCATTTTTGCTCCAAAGT...ACAAAGAGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGACTACCAGAGAAATGTTaGGTAAAATATGGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRLPEKC*VKYGSS
Trigger: AGAACTGCCATATTTTACCCAACATTTCTCTGGTAG...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp CAAGCCTTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTATAGTCACAACTTTTTaGAGGCAGACTGTATGGTCT +
Preference number: 4 (lower is better)
Translates to: QALMMEIFYLRWRVQTVTIVTTF*RQTVWS
Trigger: AGACCATACAGTCTGCCTCCAAAAAGTTGTGACTAT...AGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAAGGCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTCCTCATTCTTCTTCCTaGGACAGTTATCTTGAATGC +
Preference number: 4 (lower is better)
Translates to: CWSNHVEISLTILQKLDSPHSSS*DSYLEC
Trigger: GCATTCAAGATAACTGTCCCAGGAAGAAGAATGAGG...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
3UTR CAA 72 bp GCTGAAGGTTGTGACATATACTCCATTTTCCCACCTTaGTATGGTTTATACCTGTACTGTGAGGTGGTTTAT +
Preference number: 4 (lower is better)
Translates to: AEGCDIYSIFPP*YGLYLYCEVVY
Trigger: ATAAACCACCTCACAGTACAGGTATAAACCATACAAAGGTGGGAAAATGGAGTATATGTCACAACCTTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CAA 72 bp AGTTTAATGTGCACTCTAAAACGTCAAGCAGTAATGTaGGTGACTTTTCACCAGGAGCCTTCATGTTCATTC +
Preference number: 4 (lower is better)
Translates to: SLMCTLKRQAVM*VTFHQEPSCSF
Trigger: GAATGAACATGAAGGCTCCTGGTGAAAAGTCACCAACATTACTGCTTGACGTTTTAGAGTGCACATTAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CAA 72 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTaGACAATTCTTCAGAAATTGGATAGTTTTCTACCT +
Preference number: 4 (lower is better)
Translates to: GIECWSNHVEIS*TILQKLDSFLP
Trigger: AGGTAGAAAACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
CDS-3UTR TCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACGAGATTTCCACACAATaGAGGCATAGATTATGGGCG +
Preference number: 4 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNEISTQ*RHRLWA
Trigger: CGCCCATAATCTATGCCTTCATTGTGTGGAAATCTC...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp CAAGCCTTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTATTCTGAAAAGGTCTTaGGATTTCCACACAATGAAG +
Preference number: 4 (lower is better)
Translates to: QALMMEIFYLRWRVQTVTILKRS*DFHTMK
Trigger: CTTCATTGTGTGGAAATCTCAAGACCTTTTCAGAAT...AGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAAGGCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp TTCCTTTGCCCCATGTTAAAGTCTACTCTTAGCTTGTATGCACATTCAAATAACTTCGGGTTTCTGGTGTaGAAAAATGAAAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: FLCPMLKSTLSLYAHSNNFGFLV*KNESPS
Trigger: ACTGGGACTTTCATTTTTTCACACCAGAAACCCGAA...GTTATTTGAATGTGCATACAAGCTAAGAGTAGACTTTAACATGGGGCAAAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACAGAACACCAACATGCTaGATGTCAAGAGCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNRTPTC*MSRAWL
Trigger: AAGCCAAGCTCTTGACATTCAGCATGTTGGTGTTCT...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR GCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACACAGAGAAAATCAAATaGCTGGTCTTGGGTGTCACC +
Preference number: 4 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNTEKIK*LVLGVT
Trigger: GGTGACACCCAAGACCAGGCATTTGATTTTCTCTGT...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR GCA 90 bp TTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTCTTTGTCATGTGTCTACTTGTTaGAAAAGCATCCCATGGAGT +
Preference number: 4 (lower is better)
Translates to: LMMEIFYLRWRVQTVTLCHVSTC*KSIPWS
Trigger: ACTCCATGGGATGCTTTTGCAACAAGTAGACACATG...ACAAAGAGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR GCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACACTTTGGAGCAAAAATaGAAAGAAGCAGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNTLEQK*KEAALH
Trigger: GTGCAGGGCTGCTTCTTTGCATTTTTGCTCCAAAGT...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp TTCCTTTGCCCCATGTTAAAGTCTACTCTTAGCTTGTATGCACATTCAAATAACAGAAAATCAAATGCCTaGTCTTGGGTGTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: FLCPMLKSTLSLYAHSNNRKSNA*SWVSPS
Trigger: AGAAGGTGACACCCAAGACCAGGCATTTGATTTTCT...GTTATTTGAATGTGCATACAAGCTAAGAGTAGACTTTAACATGGGGCAAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp TTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTCTTTGTAGAAAATCAAATGCCTaGTCTTGGGTGTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: LMMEIFYLRWRVQTVTLCRKSNA*SWVSPS
Trigger: AGAAGGTGACACCCAAGACCAGGCATTTGATTTTCT...ACAAAGAGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp CAAGCCTTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTCTACCAGAGAAATGTTaGGTAAAATATGGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: QALMMEIFYLRWRVQTVTLPEKC*VKYGSS
Trigger: AGAACTGCCATATTTTACCCAACATTTCTCTGGTAG...AGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAAGGCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACGGATTTTCTGAGTCCTaGTCTGCAAGGCATAGTACA +
Preference number: 4 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNGFSES*SARHST
Trigger: TGTACTATGCCTTGCAGACCAGGACTCAGAAAATCC...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTCTGTATGGTCTTCATTaGCATATTGATCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: CWSNHVEISLTILQKLDSLYGLH*HIDLLD
Trigger: GTCCAGAAGATCAATATGCCAATGAAGACCATACAG...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTATAGTCACAACTTTTTaGAGGCAGACTGTATGGTCT +
Preference number: 4 (lower is better)
Translates to: CWSNHVEISLTILQKLDSIVTTF*RQTVWS
Trigger: AGACCATACAGTCTGCCTCCAAAAAGTTGTGACTAT...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp CAAGCCTTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTCAAACAATAAGGATGTaGCCATGTACCATATGTAGA +
Preference number: 4 (lower is better)
Translates to: QALMMEIFYLRWRVQTVTQTIRM*PCTICR
Trigger: TCTACATATGGTACATGGCCACATCCTTATTGTTTG...AGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAAGGCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
3UTR CAA 72 bp GTGTTCCTTTGCCCCATGTTAAAGTCTACTCTTAGCTaGTATGCACATTCAAATAACTGGATCTCTCCTTTA +
Preference number: 4 (lower is better)
Translates to: VFLCPMLKSTLS*YAHSNNWISPL
Trigger: TAAAGGAGAGATCCAGTTATTTGAATGTGCATACAAGCTAAGAGTAGACTTTAACATGGGGCAAAGGAACAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CAA 72 bp ATCACTCAAAGGAAGATGAAAATGACCACAGTAAAGTaGACTTACCTCAGGAATTCTGGACATGAACAGGTA +
Preference number: 4 (lower is better)
Translates to: ITQRKMKMTTVK*TYLRNSGHEQV
Trigger: TACCTGTTCATGTCCAGAATTCCTGAGGTAAGTCAACTTTACTGTGGTCATTTTCATCTTCCTTTGAGTGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
CDS-3UTR TCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTATTCTGAAAAGGTCTTaGGATTTCCACACAATGAAG +
Preference number: 4 (lower is better)
Translates to: CWSNHVEISLTILQKLDSILKRS*DFHTMK
Trigger: CTTCATTGTGTGGAAATCTCAAGACCTTTTCAGAAT...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACTTCGGGTTTCTGGTGTaGAAAAATGAAAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNFGFLV*KNESPS
Trigger: ACTGGGACTTTCATTTTTTCACACCAGAAACCCGAA...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACTTTCCCAGCATTCTTTaGCCATGTGTCTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNFPSIL*PCVYLL
Trigger: CAACAAGTAGACACATGGTCAAAGAATGCTGGGAAA...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACAGAAAATCAAATGCCTaGTCTTGGGTGTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNRKSNA*SWVSPS
Trigger: AGAAGGTGACACCCAAGACCAGGCATTTGATTTTCT...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTATAGTCACAACTTTTTaGAGGCAGACTGTATGGTCT +
Preference number: 4 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSIVTTF*RQTVWS
Trigger: AGACCATACAGTCTGCCTCCAAAAAGTTGTGACTAT...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTATTCTGAAAAGGTCTTaGGATTTCCACACAATGAAG +
Preference number: 4 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSILKRS*DFHTMK
Trigger: CTTCATTGTGTGGAAATCTCAAGACCTTTTCAGAAT...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR TCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACTCTTCATTGGCATATTaGTCTTCTGGACACTTCACA +
Preference number: 4 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNSSLAY*SSGHFT
Trigger: TGTGAAGTGTCCAGAAGATCAATATGCCAATGAAGA...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR GCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACGTAGAAATGTGTCCTTaGGAGATATCTCAGGAATTC +
Preference number: 4 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNVEMCP*EISQEF
Trigger: GAATTCCTGAGATATCTCGCAAGGACACATTTCTAC...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232758.2
CDS-3UTR CCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTCTACCAGAGAAATGTTaGGTAAAATATGGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSLPEKC*VKYGSS
Trigger: AGAACTGCCATATTTTACCCAACATTTCTCTGGTAG...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTACAAAGCTGAGAGTTTaGTTATTAGCTTTGACTATG +
Preference number: 4 (lower is better)
Translates to: CWSNHVEISLTILQKLDSTKLRV*LLALTM
Trigger: CATAGTCAAAGCTAATAACCAAACTCTCAGCTTTGT...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CCA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTCAAACAATAAGGATGTaGCCATGTACCATATGTAGA +
Preference number: 4 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSQTIRM*PCTICR
Trigger: TCTACATATGGTACATGGCCACATCCTTATTGTTTG...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
3UTR CAA 72 bp CAGAATGGCACTGGAATAGCATTGTTTCTGAATCTATaGCAATTATTTTCACTACAGTGTTGCTGGAAAATG +
Preference number: 4 (lower is better)
Translates to: QNGTGIALFLNL*QLFSLQCCWKM
Trigger: CATTTTCCAGCAACACTGTAGTGAAAATAATTGCAATAGATTCAGAAACAATGCTATTCCAGTGCCATTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CAA 72 bp TCACTCAGGAAGACTCAGTTAATCTCCTCACACCTGTaGAGAAATAATGATCAATATGGCCATGATTTATTT +
Preference number: 4 (lower is better)
Translates to: SLRKTQLISSHL*RNNDQYGHDLF
Trigger: AAATAAATCATGGCCATATTGATCATTATTTCTCAACAGGTGTGAGGAGATTAACTGAGTCTTCCTGAGTGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
3UTR CAA 72 bp GCTAACAAGATAATGAATTTGAACAACCTCTATCAATaGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGT +
Preference number: 4 (lower is better)
Translates to: ANKIMNLNNLYQ*LCCNDQVLIGS
Trigger: ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAAATTCATTATCTTGTTAGC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
ENSMUST00000233635.2
CDS-3UTR CCA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACACAAAGCTGAGAGTTTaGTTATTAGCTTTGACTATG +
Preference number: 4 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNTKLRV*LLALTM
Trigger: CATAGTCAAAGCTAATAACCAAACTCTCAGCTTTGT...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp CAAGCCTTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTGGTATGGCCCAATGCTaGAAGATACTGCCCATAACG +
Preference number: 5 (lower is better)
Translates to: QALMMEIFYLRWRVQTVTGMAQC*KILPIT
Trigger: CGTTATGGGCAGTATCTTCAAGCATTGGGCCATACC...AGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAAGGCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGACCATGTGTCTACTTGTaGCAAAAGCATCCCATGGAG +
Preference number: 5 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRPCVYL*QKHPME
Trigger: CTCCATGGGATGCTTTTGCAACAAGTAGACACATGG...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAGAAGCAGCCCTGCACTaGAAGCCAAGATACAGAAAA +
Preference number: 5 (lower is better)
Translates to: GIECWSNHVEISLTILQKEAALH*KPRYRK
Trigger: TTTTCTGTATCTTGGCTTCAAGTGCAGGGCTGCTTC...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTGGTATGGCCCAATGCTaGAAGATACTGCCCATAACG +
Preference number: 5 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSGMAQC*KILPIT
Trigger: CGTTATGGGCAGTATCTTCAAGCATTGGGCCATACC...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAACTTTCCCAGCATTCTTaGACCATGTGTCTACTTGTT +
Preference number: 5 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAELSQHS*TMCLLV
Trigger: AACAAGTAGACACATGGTCAAAGAATGCTGGGAAAG...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAGTCTTCATTGGCATATaGATCTTCTGGACACTTCAC +
Preference number: 5 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEVFIGI*IFWTLH
Trigger: GTGAAGTGTCCAGAAGATCAATATGCCAATGAAGAC...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp TTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTCTTTGTCCATGTGTCTACTTGTaGCAAAAGCATCCCATGGAG +
Preference number: 5 (lower is better)
Translates to: LMMEIFYLRWRVQTVTLCPCVYL*QKHPME
Trigger: CTCCATGGGATGCTTTTGCAACAAGTAGACACATGG...ACAAAGAGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAATATCTGTTGACCACTaGGAAGATGCTCTGAAAATC +
Preference number: 5 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEISVDH*EDALKI
Trigger: GATTTTCAGAGCATCTTCCAAGTGGTCAACAGATAT...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAAGACATATATATCTGTaGACCACTTGGAAGATGCTC +
Preference number: 5 (lower is better)
Translates to: GIECWSNHVEISLTILQKRHIYL*TTWKML
Trigger: GAGCATCTTCCAAGTGGTCAACAGATATATATGTCT...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp GATGCCAACAAGTGCTTGCTGATAGATAGGAACCTGTTACACTATCTCCTTAGACCTGGGACAGTTATCTaGAATGCCAGTATTACAATA +
Preference number: 5 (lower is better)
Translates to: DANKCLLIDRNLLHYLLRPGTVI*NASITI
Trigger: TATTGTAATACTGGCATTCAAGATAACTGTCCCAGG...TCTAAGGAGATAGTGTAACAGGTTCCTATCTATCAGCAAGCACTTGTTGGCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp TTCCTTTGCCCCATGTTAAAGTCTACTCTTAGCTTGTATGCACATTCAAATAACGAAGCAGCCCTGCACTaGAAGCCAAGATACAGAAAA +
Preference number: 5 (lower is better)
Translates to: FLCPMLKSTLSLYAHSNNEAALH*KPRYRK
Trigger: TTTTCTGTATCTTGGCTTCAAGTGCAGGGCTGCTTC...GTTATTTGAATGTGCATACAAGCTAAGAGTAGACTTTAACATGGGGCAAAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp GGGATTGAGTGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAAATTCACTACTGTAGTTaGAAGGGTGTATTCTTTGGA +
Preference number: 5 (lower is better)
Translates to: GIECWSNHVEISLTILQKIHYCS*KGVFFG
Trigger: TCCAAAGAATACACCCTTCAAACTACAGTAGTGAAT...TTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCACTCAATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp TCTGGCTCACACCAGTCAAAATGGCTAACATCAAAAATTCAGGTGACAGCAGAAATTCACTACTGTAGTTaGAAGGGTGTATTCTTTGGA +
Preference number: 5 (lower is better)
Translates to: SGSHQSKWLTSKIQVTAEIHYCS*KGVFFG
Trigger: TCCAAAGAATACACCCTTCAAACTACAGTAGTGAAT...TTCTGCTGTCACCTGAATTTTTGATGTTAGCCATTTTGACTGGTGTGAGCCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp CAAGCCTTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTCTTCTTAACCACTTCTaGTCTAGATTCCAACGGAAA +
Preference number: 5 (lower is better)
Translates to: QALMMEIFYLRWRVQTVTLLNHF*SRFQRK
Trigger: TTTCCGTTGGAATCTAGACAAGAAGTGGTTAAGAAG...AGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAAGGCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233635.2
CDS CCA 90 bp TTTCTTCCAAGGCAAGATAAACAGAGAAAATCAAATGCCTGGTCTTaGGTGTCACCTTCTTGTCTAGATTCCAACGGAAATAATCATTCT +
Preference number: 5 (lower is better)
Translates to: FLPRQDKQRKSNAWS*VSPSCLDSNGNNHS
Trigger: AGAATGATTATTTCCGTTGGAATCTAGACAAGAAGGTGACACCCAAGACCAGGCATTTGATTTTCTCTGTTTATCTTGCCTTGGAAGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp CAAGCCTTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTGTTTTCTCATCATGTTaGTCTAGGACACACTCAATA +
Preference number: 5 (lower is better)
Translates to: QALMMEIFYLRWRVQTVTVFSSC*SRTHSI
Trigger: TATTGAGTGTGTCCTAGACAAACATGATGAGAAAAC...AGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAAGGCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp TTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTCTTTGTCTTTCCCAGCATTCTTaGACCATGTGTCTACTTGTT +
Preference number: 5 (lower is better)
Translates to: LMMEIFYLRWRVQTVTLCLSQHS*TMCLLV
Trigger: AACAAGTAGACACATGGTCAAAGAATGCTGGGAAAG...ACAAAGAGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp TTCCTTTGCCCCATGTTAAAGTCTACTCTTAGCTTGTATGCACATTCAAATAACGTCTTCATTGGCATATaGATCTTCTGGACACTTCAC +
Preference number: 5 (lower is better)
Translates to: FLCPMLKSTLSLYAHSNNVFIGI*IFWTLH
Trigger: GTGAAGTGTCCAGAAGATCAATATGCCAATGAAGAC...GTTATTTGAATGTGCATACAAGCTAAGAGTAGACTTTAACATGGGGCAAAGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp TTCCTTTGCCCCATGTTAAAGTCTACTCTTAGCTTGTATGCACATTCAAATAACACTACCAGAGAAATGTaGGGTAAAATATGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: FLCPMLKSTLSLYAHSNNTTREM*GKIWQF
Trigger: GAACTGCCATATTTTACCCAACATTTCTCTGGTAGT...GTTATTTGAATGTGCATACAAGCTAAGAGTAGACTTTAACATGGGGCAAAGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp TTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTCTTTGTACTACCAGAGAAATGTaGGGTAAAATATGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: LMMEIFYLRWRVQTVTLCTTREM*GKIWQF
Trigger: GAACTGCCATATTTTACCCAACATTTCTCTGGTAGT...ACAAAGAGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTACTACCAGAGAAATGTaGGGTAAAATATGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSTTREM*GKIWQF
Trigger: GAACTGCCATATTTTACCCAACATTTCTCTGGTAGT...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp TGCTGGTCCAACCATGTGGAAATCAGTTTGACAATTCTTCAGAAATTGGATAGTGATTCTGAAAAGGTCTaGAGATTTCCACACAATGAA +
Preference number: 5 (lower is better)
Translates to: CWSNHVEISLTILQKLDSDSEKV*RFPHNE
Trigger: TTCATTGTGTGGAAATCTCAAGACCTTTTCAGAATC...ACTATCCAATTTCTGAAGAATTGTCAAACTGATTTCCACATGGTTGGACCAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp TTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTCTTTGTATATCTGTTGACCACTaGGAAGATGCTCTGAAAATC +
Preference number: 5 (lower is better)
Translates to: LMMEIFYLRWRVQTVTLCISVDH*EDALKI
Trigger: GATTTTCAGAGCATCTTCCAAGTGGTCAACAGATAT...ACAAAGAGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp TTGATGATGGAGATCTTTTACTTAAGGTGGAGAGTCCAAACTGTTACTCTTTGTAGACATATATATCTGTaGACCACTTGGAAGATGCTC +
Preference number: 5 (lower is better)
Translates to: LMMEIFYLRWRVQTVTLCRHIYL*TTWKML
Trigger: GAGCATCTTCCAAGTGGTCAACAGATATATATGTCT...ACAAAGAGTAACAGTTTGGACTCTCCACCTTAAGTAAAAGATCTCCATCATCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp TTGAACAACCTCTATCAATTGCTTTGCTGCAATGATCAAGTTTTGATAGGCAGTCCTGGGACAGTTATCTaGAATGCCAGTATTACAATA +
Preference number: 5 (lower is better)
Translates to: LNNLYQLLCCNDQVLIGSPGTVI*NASITI
Trigger: TATTGTAATACTGGCATTCAAGATAACTGTCCCAGG...ACTGCCTATCAAAACTTGATCATTGCAGCAAAGCAATTGATAGAGGTTGTTCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS CCA 90 bp TATTTATTTCTTCCAAGGCAAGATAAACAGAGAAAATCAAATGCCTaGTCTTGGGTGTCACCTTCTTGTCTAGATTCCAACGGAAATAAT +
Preference number: 5 (lower is better)
Translates to: YLFLPRQDKQRKSNA*SWVSPSCLDSNGNN
Trigger: ATTATTTCCGTTGGAATCTAGACAAGAAGGTGACACCCAAGACCAGGCATTTGATTTTCTCTGTTTATCTTGCCTTGGAAGAAATAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp TTCCTTTGCCCCATGTTAAAGTCTACTCTTAGCTTGTATGCACATTCAAATAACGTTTTCTCATCATGTTaGTCTAGGACACACTCAATA +
Preference number: 5 (lower is better)
Translates to: FLCPMLKSTLSLYAHSNNVFSSC*SRTHSI
Trigger: TATTGAGTGTGTCCTAGACAAACATGATGAGAAAAC...GTTATTTGAATGTGCATACAAGCTAAGAGTAGACTTTAACATGGGGCAAAGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACATATCTGTTGACCACTaGGAAGATGCTCTGAAAATC +
Preference number: 5 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNISVDH*EDALKI
Trigger: GATTTTCAGAGCATCTTCCAAGTGGTCAACAGATAT...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACAGACATATATATCTGTaGACCACTTGGAAGATGCTC +
Preference number: 5 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNRHIYL*TTWKML
Trigger: GAGCATCTTCCAAGTGGTCAACAGATATATATGTCT...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACCCTGGGACAGTTATCTaGAATGCCAGTATTACAATA +
Preference number: 5 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNPGTVI*NASITI
Trigger: TATTGTAATACTGGCATTCAAGATAACTGTCCCAGG...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS-3UTR CAA 90 bp CTTTTCAGCAGTCATCTCTTTACCTTACAGGAAATGATTATACATGTCCAAAACGATTCTGAAAAGGTCTaGAGATTTCCACACAATGAA +
Preference number: 5 (lower is better)
Translates to: LFSSHLFTLQEMIIHVQNDSEKV*RFPHNE
Trigger: TTCATTGTGTGGAAATCTCAAGACCTTTTCAGAATC...GTTTTGGACATGTATAATCATTTCCTGTAAGGTAAAGAGATGACTGCTGAAAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS TCA 72 bp ATGTGTCCTTGCGAGATATCTCAGGAATTCTGGACATaGACAGGTATGGCCCAATGCTTGAAGATACTGCCC +
Preference number: 6 (lower is better)
Translates to: MCPCEISQEFWT*TGMAQCLKILP
Trigger: GGGCAGTATCTTCAAGCATTGGGCCATACCTGTTCATGTCCAGAATTCCTGAGATATCTCGCAAGGACACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232758.2
CDS CAA 72 bp ACTAAGGACACCATGGCTAGTGGTAGAAATGTGTCCTaGCGAGATATCTCAGGAATTCTGGACATGAACAGG +
Preference number: 6 (lower is better)
Translates to: TKDTMASGRNVS*RDISGILDMNR
Trigger: CCTGTTCATGTCCAGAATTCCTGAGATATCTCGCAAGGACACATTTCTACCACTAGCCATGGTGTCCTTAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232758.2
CDS CCA 72 bp CTTCCAAGGCAAGATAAACAGAGAAAATCAAATGCCTaGTCTTGGGTGTCACCTTCTTGTCTAGATTCCAAC +
Preference number: 6 (lower is better)
Translates to: LPRQDKQRKSNA*SWVSPSCLDSN
Trigger: GTTGGAATCTAGACAAGAAGGTGACACCCAAGACCAGGCATTTGATTTTCTCTGTTTATCTTGCCTTGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2
CDS CCA 72 bp AGGCAAGATAAACAGAGAAAATCAAATGCCTGGTCTTaGGTGTCACCTTCTTGTCTAGATTCCAACGGAAAT +
Preference number: 6 (lower is better)
Translates to: RQDKQRKSNAWS*VSPSCLDSNGN
Trigger: ATTTCCGTTGGAATCTAGACAAGAAGGTGACACCCAAGACCAGGCATTTGATTTTCTCTGTTTATCTTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000166355.3
ENSMUST00000232758.2
ENSMUST00000232886.2