RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN2R73 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000070458

Ensembl transcript IDs: ENSMUST00000077478.8, ENSMUST00000232897.2, ENSMUST00000232965.2, ENSMUST00000233079.2, ENSMUST00000233115.2, ENSMUST00000233315.2, ENSMUST00000233729.2, ENSMUST00000233748.2

Found 463 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GATCTCAGGCCGAACATGGTGGCACACACCATTAATTCCAGCACTTaGGAGGCAGAGGAAGGCAAATTTCTGAGTTCAAGGACAGCCAGG +
Preference number: 1 (lower is better)
Translates to: DLRPNMVAHTINSST*EAEEGKFLSSRTAR
Trigger: CCTGGCTGTCCTTGAACTCAGAAATTTGCCTTCCTCTGCCTCCCAAGTGCTGGAATTAATGGTGTGTGCCACCATGTTCGGCCTGAGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR CCA 90 bp CTTAGCTTTAATGCACATTCAAAAGACAGGATCTCAGGCCGAACATaGTGGCACACACCATTAATTCCAGCACTTGGGAGGCAGAGGAAG +
Preference number: 1 (lower is better)
Translates to: LSFNAHSKDRISGRT*WHTPLIPALGRQRK
Trigger: CTTCCTCTGCCTCCCAAGTGCTGGAATTAATGGTGTGTGCCACCATGTTCGGCCTGAGATCCTGTCTTTTGAATGTGCATTAAAGCTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR TCA 90 bp TACAGTAATTGTCTTGGCCAAGATAGTAGAGGCAGCCACAGTGAATaGAATGGCAAATGTGCTCTGCTGCAGGACACAGATGACTATAGT +
Preference number: 1 (lower is better)
Translates to: YSNCLGQDSRGSHSE*NGKCALLQDTDDYS
Trigger: ACTATAGTCATCTGTGTCCTGCAGCAGAGCACATTTGCCATTTCATTCACTGTGGCTGCCTCTACTATCTTGGCCAAGACAATTACTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR CCA 90 bp TGCTGGTGGGATTGCAAGCTTGTACAACCAATCTTGATGTCAGTCTaGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAAGATCCA +
Preference number: 1 (lower is better)
Translates to: CWWDCKLVQPILMSV*RFLRKLNTMLLEDP
Trigger: TGGATCTTCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATTGGTTGTACAAGCTTGCAATCCCACCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR TCA 90 bp ACTGCATGGTACTGGTATAGTGACTGTCAGGTAGATCAATGGAATTaGATTGAAGACCCAGAAATGAATCCACACACCTGTGGTCACTAT +
Preference number: 1 (lower is better)
Translates to: TAWYWYSDCQVDQWN*IEDPEMNPHTCGHY
Trigger: ATAGTGACCACAGGTGTGTGGATTCATTTCTGGGTCTTCAATTCAATTCCATTGATCTACCTGACAGTCACTATACCAGTACCATGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR CCA 90 bp ATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTTaGATAACATTGCTCCTGAATCTATTGCCATTCTTTTCACTACAG +
Preference number: 1 (lower is better)
Translates to: IHPDVHAYYLDQCGA*ITLLLNLLPFFSLQ
Trigger: CTGTAGTGAAAAGAATGGCAATAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR GCA 90 bp AGCATATACCCAGAAGAAGGTCCAACTGGTAATAAGAACACATGCTaGACTTTGTTCATAGCAGCCAAATTTATCATAATTAGAAGCAGG +
Preference number: 1 (lower is better)
Translates to: SIYPEEGPTGNKNTC*TLFIAAKFIIIRSR
Trigger: CCTGCTTCTAATTATGATAAATTTGGCTGCTATGAACAAAGTGCAGCATGTGTTCTTATTACCAGTTGGACCTTCTTCTGGGTATATGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR GCA 90 bp CTGAGCATATACCCAGAAGAAGGTCCAACTGGTAATAAGAACACATaGTGCACTTTGTTCATAGCAGCCAAATTTATCATAATTAGAAGC +
Preference number: 1 (lower is better)
Translates to: LSIYPEEGPTGNKNT*CTLFIAAKFIIIRS
Trigger: GCTTCTAATTATGATAAATTTGGCTGCTATGAACAAAGTGCAGCATGTGTTCTTATTACCAGTTGGACCTTCTTCTGGGTATATGCTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR TCA 90 bp GACCTTCAAAGAAGACCTAGTACCAATACTCCTGAAACTATTCCATaGAAAAGAAACATAAAGTACACAAATTCCTTTTATGAGGCCACC +
Preference number: 1 (lower is better)
Translates to: DLQRRPSTNTPETIP*KRNIKYTNSFYEAT
Trigger: GGTGGCCTCATAAAAGGAATTTGTGTACTTTATGTTTCTTTTTCATGGAATAGTTTCAGGAGTATTGGTACTAGGTCTTCTTTGAAGGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR GCA 90 bp AACAGTCCCATAACCACAAAGGAATTGGTAGTAGTAATTAAAAATTaGCTAACCAAATACTGCACATGGCCAGATGATTTTAGTGCAGAA +
Preference number: 1 (lower is better)
Translates to: NSPITTKELVVVIKN*LTKYCTWPDDFSAE
Trigger: TTCTGCACTAAAATCATCTGGCCATGTGCAGTATTTGGTTAGGCAATTTTTAATTACTACTACCAATTCCTTTGTGGTTATGGGACTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR TCA 90 bp AAACAGCATCATATTATAAAGATAGAATTTCACAACACTTCTAAGTaGTTGGCCCTTAGTTTCTCTGCCTCCTATGCCAAGATATTTTCC +
Preference number: 1 (lower is better)
Translates to: KQHHIIKIEFHNTSK*LALSFSASYAKIFS
Trigger: GGAAAATATCTTGGCATAGGAGGCAGAGAAACTAAGGGCCAATCACTTAGAAGTGTTGTGAAATTCTATCTTTATAATATGATGCTGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR TCA 90 bp GTTTTCCTTCCAAATGCCCTCTGTACTTATAGTTTAAAGTTTGTTTaGGGAGACCTAATGAAGATCTCCAGAACTTATGTGAGTATTTTC +
Preference number: 1 (lower is better)
Translates to: VFLPNALCTYSLKFV*GDLMKISRTYVSIF
Trigger: GAAAATACTCACATAAGTTCTGGAGATCTTCATTAGGTCTCCTCAAACAAACTTTAAACTATAAGTACAGAGGGCATTTGGAAGGAAAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR CCA 90 bp AAAGAACCCATTTGTCTCTCAACAGAAGAATGGATAGAGAAAATGTaGTACATTTACATATCCCTTGATATTGCAAACTTTATATGCCCC +
Preference number: 1 (lower is better)
Translates to: KEPICLSTEEWIEKM*YIYISLDIANFICP
Trigger: GGGGCATATAAAGTTTGCAATATCAAGGGATATGTAAATGTACCACATTTTCTCTATCCATTCTTCTGTTGAGAGACAAATGGGTTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR CCA 90 bp ACATTGCTCCTGAATCTATTGCCATTCTTTTCACTACAGGCTAGCTaGACAAAGTATTTCCACTATTATTATAACCTTTATTTGGAAGGA +
Preference number: 1 (lower is better)
Translates to: TLLLNLLPFFSLQAS*TKYFHYYYNLYLEG
Trigger: TCCTTCCAAATAAAGGTTATAATAATAGTGGAAATACTTTGTCCAGCTAGCCTGTAGTGAAAAGAATGGCAATAGATTCAGGAGCAATGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR CAA 90 bp CTCAGAGCAGTGCATCAGTGGCCCACTTTTGACTCCCTGTTCTTCTaGGGTGGAGAGGCCCAATTCAGAGATCAGGACAATAGTGTTGTC +
Preference number: 2 (lower is better)
Translates to: LRAVHQWPTFDSLFF*GGEAQFRDQDNSVV
Trigger: GACAACACTATTGTCCTGATCTCTGAATTGGGCCTCTCCACCCAAGAAGAACAGGGAGTCAAAAGTGGGCCACTGATGCACTGCTCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTACCCAGTTCAGGGGAATaGCAGCGCCAAGAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLPSSGE*QRQEGG
Trigger: TCCCCCTTCTTGGCGCTGGCATTCCCCTGAACTGGG...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCCCAGTTCAGGGGAATaGCAGCGCCAAGAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNPSSGE*QRQEGG
Trigger: TCCCCCTTCTTGGCGCTGGCATTCCCCTGAACTGGG...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTAGGAAGGCAAATTTCTaGGTTCAAGGACAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGARKANF*VQGQPG
Trigger: CCCTGGCTGTCCTTGAACTCAGAAATTTGCCTTCCT...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGACCCAGTTCAGGGGAATaGCAGCGCCAAGAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRPSSGE*QRQEGG
Trigger: TCCCCCTTCTTGGCGCTGGCATTCCCCTGAACTGGG...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATATGGGGCAGCAGAAATaGACCTCAGCAGGAGGGATG +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNMGQQK*TSAGGM
Trigger: CATCCCTCCTGCTGAGGTGCATTTCTGCTGCCCCAT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAGCCAAGAAGGGGGAGTaGGTGGGTAGGAAAACAGAG +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLAKKGE*VGRKTE
Trigger: CTCTGTTTTCCTACCCACCCACTCCCCCTTCTTGGC...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATGCCAAGAAGGGGGAGTaGGTGGGTAGGAAAACAGAG +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNAKKGE*VGRKTE
Trigger: CTCTGTTTTCCTACCCACCCACTCCCCCTTCTTGGC...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTGATCAAAAATTCAGGTaGCAGCAGATGCAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGADQKFR*QQMQAR
Trigger: CCTTGCCTGCATCTGCTGTCACCTGAATTTTTGATC...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTTTGAAGACCCAGAAATaGATCCACACACCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGALKTQK*IHTPVV
Trigger: GACCACAGGTGTGTGGATTCATTTCTGGGTCTTCAA...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTTCAGGCCGAACATGGTaGCACACACCATTAATTCCA +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGASGRTW*HTPLIP
Trigger: TGGAATTAATGGTGTGTGCCACCATGTTCGGCCTGA...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATAGAAGGGGGAGTGGGTaGGTAGGAAAACAGAGTTGG +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNRRGSG*VGKQSW
Trigger: CCAACTCTGTTTTCCTACCCACCCACTCCCCCTTCT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAAGAAGGGGGAGTGGGTaGGTAGGAAAACAGAGTTGG +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLRRGSG*VGKQSW
Trigger: CCAACTCTGTTTTCCTACCCACCCACTCCCCCTTCT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAGCCAAGAAGGGGGAGTaGGTGGGTAGGAAAACAGAG +
Preference number: 2 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGAKKGE*VGRKTE
Trigger: CTCTGTTTTCCTACCCACCCACTCCCCCTTCTTGGC...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTACACTCCTCCATTGCTaGTGGGATTGCAAGCTTGTA +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGATLLHC*WDCKLV
Trigger: TACAAGCTTGCAATCCCACCAGCAATGGAGGAGTGT...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTATGCAGGCAAGGATGTaGAGAAAGAGGAACACTCCT +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAMQARM*RKRNTP
Trigger: AGGAGTGTTCCTCTTTCTCCACATCCTTGCCTGCAT...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTCAGCCAGGGCTACATTaGGAAACCCTGTTTCTAAAA +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAQPGLH*ETLFLK
Trigger: TTTTAGAAACAGGGTTTCTCAATGTAGCCCTGGCTG...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATAGGAAGGCAAATTTCTaGGTTCAAGGACAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNRKANF*VQGQPG
Trigger: CCCTGGCTGTCCTTGAACTCAGAAATTTGCCTTCCT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATGGCAGCCACAGTGAATaGAATGGCAAATGTGCTCTG +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNGSHSE*NGKCAL
Trigger: CAGAGCACATTTGCCATTTCATTCACTGTGGCTGCC...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACCCCAGTTCAGGGGAATaGCAGCGCCAAGAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHPSSGE*QRQEGG
Trigger: TCCCCCTTCTTGGCGCTGGCATTCCCCTGAACTGGG...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTCAGGTGACAGCAGATaGAGGCAAGGATGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNSGDSR*RQGCGE
Trigger: TTCTCCACATCCTTGCCTGCATCTGCTGTCACCTGA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTATCAGGTGACAGCAGATaGAGGCAAGGATGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLSGDSR*RQGCGE
Trigger: TTCTCCACATCCTTGCCTGCATCTGCTGTCACCTGA...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTTCACTATGGGTTGAATaGATGTGTGGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGASLWVE*MCGVCV
Trigger: CACACACACACCACACATCCATTCAACCCATAGTGA...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAGCCAAGAAGGGGGAGTaGGTGGGTAGGAAAACAGAG +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEAKKGE*VGRKTE
Trigger: CTCTGTTTTCCTACCCACCCACTCCCCCTTCTTGGC...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTGCATCCCCCAAATTATaGAACACAGTGAAAGCAGTG +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAASPKL*NTVKAV
Trigger: CACTGCTTTCACTGTGTTCCATAATTTGGGGGATGC...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATACTCCCTGTTCTTCTTaGGTGGAGAGGCCCAATTCA +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNTPCSS*VERPNS
Trigger: TGAATTGGGCCTCTCCACCCAAGAAGAACAGGGAGT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATGGCTGGAACAATCTGTaGTTGTTCTCAGAGCAGTGC +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNGWNNL*LFSEQC
Trigger: GCACTGCTCTGAGAACAACCACAGATTGTTCCAGCC...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAAGGAAGGCAAATTTCTaGGTTCAAGGACAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGRKANF*VQGQPG
Trigger: CCCTGGCTGTCCTTGAACTCAGAAATTTGCCTTCCT...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATGATCAAAAATTCAGGTaGCAGCAGATGCAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNDQKFR*QQMQAR
Trigger: CCTTGCCTGCATCTGCTGTCACCTGAATTTTTGATC...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTTGAAGACCCAGAAATaGATCCACACACCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNLKTQK*IHTPVV
Trigger: GACCACAGGTGTGTGGATTCATTTCTGGGTCTTCAA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTCTACACATTGATGCATaGAAGGGCTTAGAAAAGCCA +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGALHIDA*KGLEKP
Trigger: TGGCTTTTCTAAGCCCTTTCATGCATCAATGTGTAG...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCACATGGAAGCAGTCTaGGTAGCATTAAGGTCTCAC +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNHMEAV*VALRSH
Trigger: GTGAGACCTTAATGCTACTCAGACTGCTTCCATGTG...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAGGCAGCCACAGTGAATaGAATGGCAAATGTGCTCTG +
Preference number: 2 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGGSHSE*NGKCAL
Trigger: CAGAGCACATTTGCCATTTCATTCACTGTGGCTGCC...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTATTGCAAACTTTATATaGCCCAGTTCAGGGGAATGC +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAIANFI*PSSGEC
Trigger: GCATTCCCCTGAACTGGGGCATATAAAGTTTGCAAT...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTTGTTCTCAGAGCAGTaGATCAGTGGCCCACTTTTG +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNLFSEQ*ISGPLL
Trigger: CAAAAGTGGGCCACTGATGCACTGCTCTGAGAACAA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTATCAGGCCGAACATGGTaGCACACACCATTAATTCCA +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLSGRTW*HTPLIP
Trigger: TGGAATTAATGGTGTGTGCCACCATGTTCGGCCTGA...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTCAGGCCGAACATGGTaGCACACACCATTAATTCCA +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNSGRTW*HTPLIP
Trigger: TGGAATTAATGGTGTGTGCCACCATGTTCGGCCTGA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTACATGGACCAATCCATaGCTACCATGTATTTCATCC +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGATWTNP*LPCISS
Trigger: GGATGAAATACATGGTAGCCATGGATTGGTCCATGT...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAAGAAGGGGGAGTGGGTaGGTAGGAAAACAGAGTTGG +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQERRGSG*VGKQSW
Trigger: CCAACTCTGTTTTCCTACCCACCCACTCCCCCTTCT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATACACTCCTCCATTGCTaGTGGGATTGCAAGCTTGTA +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNTLLHC*WDCKLV
Trigger: TACAAGCTTGCAATCCCACCAGCAATGGAGGAGTGT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTATCATTGCTCCCTGAGTaGCATTTGTACCTCCTGCAT +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLSLLPE*HLYLLH
Trigger: ATGCAGGAGGTACAAATGCCACTCAGGGAGCAATGA...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR CAA 90 bp TACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTATaGCCATTCTTTTCACTACAGGCTAGCTGGACAAAGTATTTCCAC +
Preference number: 2 (lower is better)
Translates to: YLDQCGAWITLLLNL*PFFSLQASWTKYFH
Trigger: GTGGAAATACTTTGTCCAGCTAGCCTGTAGTGAAAAGAATGGCAATAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTACAGCCAGGGCTACATTaGGAAACCCTGTTTCTAAAA +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLQPGLH*ETLFLK
Trigger: TTTTAGAAACAGGGTTTCTCAATGTAGCCCTGGCTG...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAAGGAAGGCAAATTTCTaGGTTCAAGGACAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQERKANF*VQGQPG
Trigger: CCCTGGCTGTCCTTGAACTCAGAAATTTGCCTTCCT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTTGTACAACCAATCTTaGTGTCAGTCTGGAGGTTCC +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNLYNQS*CQSGGS
Trigger: GGAACCTCCAGACTGACATCAAGATTGGTTGTACAA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTATTGTACAACCAATCTTaGTGTCAGTCTGGAGGTTCC +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLLYNQS*CQSGGS
Trigger: GGAACCTCCAGACTGACATCAAGATTGGTTGTACAA...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTTGCCTAACCAAATACTaGACATGGCCAGATGATTTT +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGACLTKY*TWPDDF
Trigger: AAAATCATCTGGCCATGTGCAGTATTTGGTTAGGCA...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAATGAAATGGCAAATGTaGTCTGCTGCAGGACACAGA +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLMKWQM*SAAGHR
Trigger: TCTGTGTCCTGCAGCAGAGCACATTTGCCATTTCAT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAATTTTGGGGCAAAGATaGAAAGAAGAAGCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLILGQR*KEEALH
Trigger: GTGCAGGGCTTCTTCTTTGCATCTTTGCCCCAAAAT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGATCAGGCCGAACATGGTaGCACACACCATTAATTCCA +
Preference number: 2 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGSGRTW*HTPLIP
Trigger: TGGAATTAATGGTGTGTGCCACCATGTTCGGCCTGA...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTATCACTATGGGTTGAATaGATGTGTGGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLSLWVE*MCGVCV
Trigger: CACACACACACCACACATCCATTCAACCCATAGTGA...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTCACTATGGGTTGAATaGATGTGTGGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNSLWVE*MCGVCV
Trigger: CACACACACACCACACATCCATTCAACCCATAGTGA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACGCCAAGAAGGGGGAGTaGGTGGGTAGGAAAACAGAG +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHAKKGE*VGRKTE
Trigger: CTCTGTTTTCCTACCCACCCACTCCCCCTTCTTGGC...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTAAAACTGCATGGTACTaGTATAGTGACTGTCAGGTA +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAKTAWY*YSDCQV
Trigger: TACCTGACAGTCACTATACCAGTACCATGCAGTTTT...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTGAAGACCTCAGAAAATaGAAAGATCTGCCAAGCTAT +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAEDLRK*KDLPSY
Trigger: ATAGCTTGGCAGATCTTTCCATTTTCTGAGGTCTTC...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAGCATCCCCCAAATTATaGAACACAGTGAAAGCAGTG +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLASPKL*NTVKAV
Trigger: CACTGCTTTCACTGTGTTCCATAATTTGGGGGATGC...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTCTGGACAGATGTAAATaGTACTGTTTTTCCAGTTAC +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGALDRCK*YCFSSY
Trigger: GTAACTGGAAAAACAGTATCATTTACATCTGTCCAG...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATAATATCACTATGGGTTaGATGGATGTGTGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNNITMG*MDVWCV
Trigger: CACACACCACACATCCATTCAACCCATAGTGATATT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATGGTTCCTCAGAAAATTaGACACAATGCTACTGGAAG +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNGSSEN*TQCYWK
Trigger: CTTCCAGTAGCATTGTGTTCAATTTTCTGAGGAACC...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAGGTTCCTCAGAAAATTaGACACAATGCTACTGGAAG +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLGSSEN*TQCYWK
Trigger: CTTCCAGTAGCATTGTGTTCAATTTTCTGAGGAACC...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAGATCAAAAATTCAGGTaGCAGCAGATGCAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEDQKFR*QQMQAR
Trigger: CCTTGCCTGCATCTGCTGTCACCTGAATTTTTGATC...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAGATCAAAAATTCAGGTaGCAGCAGATGCAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRDQKFR*QQMQAR
Trigger: CCTTGCCTGCATCTGCTGTCACCTGAATTTTTGATC...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGATTGAAGACCCAGAAATaGATCCACACACCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRLKTQK*IHTPVV
Trigger: GACCACAGGTGTGTGGATTCATTTCTGGGTCTTCAA...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAATTGAAGACCCAGAAATaGATCCACACACCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQELKTQK*IHTPVV
Trigger: GACCACAGGTGTGTGGATTCATTTCTGGGTCTTCAA...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTGTAGATCAATGGAATTaGATTGAAGACCCAGAAATG +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAVDQWN*IEDPEM
Trigger: CATTTCTGGGTCTTCAATTCAATTCCATTGATCTAC...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTTTTGAAGAAAGCAGTTaGAGAAGACCTCAGAAAATG +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAFEESS*RRPQKM
Trigger: CATTTTCTGAGGTCTTCTTCAACTGCTTTCTTCAAA...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTTCTCATGGTCCCTGCTaGATTATCCATTTATTTAAC +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGASHGPC*IIHLFN
Trigger: GTTAAATAAATGGATAATTCAGCAGGGACCATGAGA...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTACTACACATTGATGCATaGAAGGGCTTAGAAAAGCCA +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLLHIDA*KGLEKP
Trigger: TGGCTTTTCTAAGCCCTTTCATGCATCAATGTGTAG...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCCACAGAGAATCAGCTaGATCATGGTGCATATAAGA +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNPQRIS*IMVHIR
Trigger: TCTTATATGCACCATGATTCAGCTGATTCTCTGTGG...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTTTTCTCTGCCTCCTATaGCAAGATATTTTCCAAGTA +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAFLCLL*QDIFQV
Trigger: TACTTGGAAAATATCTTGGCATAGGAGGCAGAGAAA...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAATTGCAAACTTTATATaGCCCAGTTCAGGGGAATGC +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLIANFI*PSSGEC
Trigger: GCATTCCCCTGAACTGGGGCATATAAAGTTTGCAAT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTGAAAATGGAAAGATCTaGCAAGCTATTGGATTGGTA +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAENGKI*QAIGLV
Trigger: TACCAATCCAATAGCTTGGCAGATCTTTCCATTTTC...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATGGCATTTGTACCTCCTaGATTGTTCTTCAGTCACTA +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNGICTS*IVLQSL
Trigger: TAGTGACTGAAGAACAATGCAGGAGGTACAAATGCC...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAGCAAATGTGCTCTGCTaGAGGACACAGATGACTATA +
Preference number: 2 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGANVLC*RTQMTI
Trigger: TATAGTCATCTGTGTCCTGCAGCAGAGCACATTTGC...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAATGAAATGGCAAATGTaGTCTGCTGCAGGACACAGA +
Preference number: 2 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGMKWQM*SAAGHR
Trigger: TCTGTGTCCTGCAGCAGAGCACATTTGCCATTTCAT...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAATTTTGGGGCAAAGATaGAAAGAAGAAGCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGILGQR*KEEALH
Trigger: GTGCAGGGCTTCTTCTTTGCATCTTTGCCCCAAAAT...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGATCAGGCCGAACATGGTaGCACACACCATTAATTCCA +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRSGRTW*HTPLIP
Trigger: TGGAATTAATGGTGTGTGCCACCATGTTCGGCCTGA...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAATCAGGCCGAACATGGTaGCACACACCATTAATTCCA +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQESGRTW*HTPLIP
Trigger: TGGAATTAATGGTGTGTGCCACCATGTTCGGCCTGA...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAACATGGACCAATCCATaGCTACCATGTATTTCATCC +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLTWTNP*LPCISS
Trigger: GGATGAAATACATGGTAGCCATGGATTGGTCCATGT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATACATGGACCAATCCATaGCTACCATGTATTTCATCC +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNTWTNP*LPCISS
Trigger: GGATGAAATACATGGTAGCCATGGATTGGTCCATGT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGATCACTATGGGTTGAATaGATGTGTGGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGSLWVE*MCGVCV
Trigger: CACACACACACCACACATCCATTCAACCCATAGTGA...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTCCCTCACCCAGATTCTaGAATAAAATCCTAATACAA +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAPSPRF*NKILIQ
Trigger: TTGTATTAGGATTTTATTCCAGAATCTGGGTGAGGG...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACAGAAGGGGGAGTGGGTaGGTAGGAAAACAGAGTTGG +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHRRGSG*VGKQSW
Trigger: CCAACTCTGTTTTCCTACCCACCCACTCCCCCTTCT...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAACACTCCTCCATTGCTaGTGGGATTGCAAGCTTGTA +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQETLLHC*WDCKLV
Trigger: TACAAGCTTGCAATCCCACCAGCAATGGAGGAGTGT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAATGCAGGCAAGGATGTaGAGAAAGAGGAACACTCCT +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRMQARM*RKRNTP
Trigger: AGGAGTGTTCCTCTTTCTCCACATCCTTGCCTGCAT...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAATGCAGGCAAGGATGTaGAGAAAGAGGAACACTCCT +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEMQARM*RKRNTP
Trigger: AGGAGTGTTCCTCTTTCTCCACATCCTTGCCTGCAT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTTATCATGGATATCAATaGGAGTTATTTCCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAYHGYQ*ELFPLE
Trigger: TTCCAGGGGAAATAACTCCCATTGATATCCATGATA...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTACATGCTTATTACCTaGATCAGTGTGGTGCTTGGA +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNYMLIT*ISVVLG
Trigger: TCCAAGCACCACACTGATCCAGGTAATAAGCATGTA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAATCAGCATCAACAAATaGAGGGGAAGTTCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEISINK*RGSSQP
Trigger: TGGCTGGGAACTTCCCCTCCATTTGTTGATGCTGAT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAACAGCCAGGGCTACATTaGGAAACCCTGTTTCTAAAA +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEQPGLH*ETLFLK
Trigger: TTTTAGAAACAGGGTTTCTCAATGTAGCCCTGGCTG...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGAAGGAAGGCAAATTTCTaGGTTCAAGGACAGCCAGGG +
Preference number: 2 (lower is better)
Translates to: WCFSELFIFIRISKPSPRRKANF*VQGQPG
Trigger: CCCTGGCTGTCCTTGAACTCAGAAATTTGCCTTCCT...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAATTGTACAACCAATCTTaGTGTCAGTCTGGAGGTTCC +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQELYNQS*CQSGGS
Trigger: GGAACCTCCAGACTGACATCAAGATTGGTTGTACAA...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGATTGTACAACCAATCTTaGTGTCAGTCTGGAGGTTCC +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRLYNQS*CQSGGS
Trigger: GGAACCTCCAGACTGACATCAAGATTGGTTGTACAA...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACGGCAGCCACAGTGAATaGAATGGCAAATGTGCTCTG +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHGSHSE*NGKCAL
Trigger: CAGAGCACATTTGCCATTTCATTCACTGTGGCTGCC...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGAGGCAGCCACAGTGAATaGAATGGCAAATGTGCTCTG +
Preference number: 2 (lower is better)
Translates to: WCFSELFIFIRISKPSPRGSHSE*NGKCAL
Trigger: CAGAGCACATTTGCCATTTCATTCACTGTGGCTGCC...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAATTGCAAACTTTATATaGCCCAGTTCAGGGGAATGC +
Preference number: 2 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGIANFI*PSSGEC
Trigger: GCATTCCCCTGAACTGGGGCATATAAAGTTTGCAAT...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAAATAAGAACACATGCTaGACTTTGTTCATAGCAGCC +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLNKNTC*TLFIAA
Trigger: GGCTGCTATGAACAAAGTGCAGCATGTGTTCTTATT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACTCAGGTGACAGCAGATaGAGGCAAGGATGTGGAGAA +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHSGDSR*RQGCGE
Trigger: TTCTCCACATCCTTGCCTGCATCTGCTGTCACCTGA...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTATGCCTAACCAAATACTaGACATGGCCAGATGATTTT +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLCLTKY*TWPDDF
Trigger: AAAATCATCTGGCCATGTGCAGTATTTGGTTAGGCA...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAAAATTCCTGATTCATTaGTCCCTGAGTGGCATTTGT +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLKFLIH*SLSGIC
Trigger: ACAAATGCCACTCAGGGAGCAATGAATCAGGAATTT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATAAATTCCTGATTCATTaGTCCCTGAGTGGCATTTGT +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNKFLIH*SLSGIC
Trigger: ACAAATGCCACTCAGGGAGCAATGAATCAGGAATTT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATGGCTCAAGGTTTAAATaGACAAGCAAAAGGAGAAGT +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNGSRFK*TSKRRS
Trigger: ACTTCTCCTTTTGCTTGTGCATTTAAACCTTGAGCC...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAGCAAATGTGCTCTGCTaGAGGACACAGATGACTATA +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEANVLC*RTQMTI
Trigger: TATAGTCATCTGTGTCCTGCAGCAGAGCACATTTGC...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAGCAAATGTGCTCTGCTaGAGGACACAGATGACTATA +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRANVLC*RTQMTI
Trigger: TATAGTCATCTGTGTCCTGCAGCAGAGCACATTTGC...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAACACTTCTAAGTGATTaGCCCTTAGTTTCTCTGCCT +
Preference number: 2 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGTLLSD*PLVSLP
Trigger: AGGCAGAGAAACTAAGGGCCAATCACTTAGAAGTGT...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGATCACTATGGGTTGAATaGATGTGTGGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRSLWVE*MCGVCV
Trigger: CACACACACACCACACATCCATTCAACCCATAGTGA...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTTCATACCAGTCAGAATaGCTAAGATCAAAAATTCAG +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGASYQSE*LRSKIQ
Trigger: CTGAATTTTTGATCTTAGCCATTCTGACTGGTATGA...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAAGGCCACCAACAGATTaGGAAAGGATTTTTACTGAT +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLRPPTD*ERIFTD
Trigger: ATCAGTAAAAATCCTTTCCCAATCTGTTGGTGGCCT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATAGGCCACCAACAGATTaGGAAAGGATTTTTACTGAT +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNRPPTD*ERIFTD
Trigger: ATCAGTAAAAATCCTTTCCCAATCTGTTGGTGGCCT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATAAAACTGCATGGTACTaGTATAGTGACTGTCAGGTA +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNKTAWY*YSDCQV
Trigger: TACCTGACAGTCACTATACCAGTACCATGCAGTTTT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAAAAACTGCATGGTACTaGTATAGTGACTGTCAGGTA +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLKTAWY*YSDCQV
Trigger: TACCTGACAGTCACTATACCAGTACCATGCAGTTTT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTGTAATAAAAACTGCATaGTACTGGTATAGTGACTGT +
Preference number: 2 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAVIKTA*YWYSDC
Trigger: ACAGTCACTATACCAGTACCATGCAGTTTTTATTAC...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATGAAGACCTCAGAAAATaGAAAGATCTGCCAAGCTAT +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNEDLRK*KDLPSY
Trigger: ATAGCTTGGCAGATCTTTCCATTTTCTGAGGTCTTC...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTATCAGATTATACAGATTaGTCCAATAAACTGAGGTCC +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLSDYTD*SNKLRS
Trigger: GGACCTCAGTTTATTGGATCAATCTGTATAATCTGA...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTACAAACAAGAAAGACATaGTCTCTCCTTTACTTCACA +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLQTRKT*SLLYFT
Trigger: TGTGAAGTAAAGGAGAGATCATGTCTTTCTTGTTTG...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTACTGGACAGATGTAAATaGTACTGTTTTTCCAGTTAC +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLLDRCK*YCFSSY
Trigger: GTAACTGGAAAAACAGTATCATTTACATCTGTCCAG...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTGTTATTTCCCAGTCTaGATTTCCCTAATAGTTAGC +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNCYFPV*ISLIVS
Trigger: GCTAACTATTAGGGAAATTCAGACTGGGAAATAACA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTATGTTATTTCCCAGTCTaGATTTCCCTAATAGTTAGC +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLCYFPV*ISLIVS
Trigger: GCTAACTATTAGGGAAATTCAGACTGGGAAATAACA...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAAATATCACTATGGGTTaGATGGATGTGTGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRNITMG*MDVWCV
Trigger: CACACACCACACATCCATTCAACCCATAGTGATATT...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAAATATCACTATGGGTTaGATGGATGTGTGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQENITMG*MDVWCV
Trigger: CACACACCACACATCCATTCAACCCATAGTGATATT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAGGTTCCTCAGAAAATTaGACACAATGCTACTGGAAG +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEGSSEN*TQCYWK
Trigger: CTTCCAGTAGCATTGTGTTCAATTTTCTGAGGAACC...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACGATCAAAAATTCAGGTaGCAGCAGATGCAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHDQKFR*QQMQAR
Trigger: CCTTGCCTGCATCTGCTGTCACCTGAATTTTTGATC...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTCAATGGAATTGAATTaGAGACCCAGAAATGAATCC +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNSMELN*RPRNES
Trigger: GGATTCATTTCTGGGTCTTCAATTCAATTCCATTGA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTATCAATGGAATTGAATTaGAGACCCAGAAATGAATCC +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLSMELN*RPRNES
Trigger: GGATTCATTTCTGGGTCTTCAATTCAATTCCATTGA...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAGTAGATCAATGGAATTaGATTGAAGACCCAGAAATG +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLVDQWN*IEDPEM
Trigger: CATTTCTGGGTCTTCAATTCAATTCCATTGATCTAC...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTTTGAAGAAAGCAGTTaGAGAAGACCTCAGAAAATG +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNFEESS*RRPQKM
Trigger: CATTTTCTGAGGTCTTCTTCAACTGCTTTCTTCAAA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAACACAAATTCCTTTTATaGGGCCACCGTTACTCTGAT +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEHKFLL*GHRYSD
Trigger: ATCAGAGTAACGGTGGCCTCATAAAAGGAATTTGTG...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTCTCATGGTCCCTGCTaGATTATCCATTTATTTAAC +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNSHGPC*IIHLFN
Trigger: GTTAAATAAATGGATAATTCAGCAGGGACCATGAGA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTTACAAACTCCAGGTTaGCAAAAATCTTCCCTCATT +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNLQTPG*QKSSLI
Trigger: AATGAGGGAAGATTTTTGTCAACCTGGAGTTTGTAA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAACCACAGAGAATCAGCTaGATCATGGTGCATATAAGA +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEPQRIS*IMVHIR
Trigger: TCTTATATGCACCATGATTCAGCTGATTCTCTGTGG...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTATTTCTCTGCCTCCTATaGCAAGATATTTTCCAAGTA +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLFLCLL*QDIFQV
Trigger: TACTTGGAAAATATCTTGGCATAGGAGGCAGAGAAA...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAAATAAGAACACATGCTaGACTTTGTTCATAGCAGCC +
Preference number: 2 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGNKNTC*TLFIAA
Trigger: GGCTGCTATGAACAAAGTGCAGCATGTGTTCTTATT...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATGAAAATGGAAAGATCTaGCAAGCTATTGGATTGGTA +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNENGKI*QAIGLV
Trigger: TACCAATCCAATAGCTTGGCAGATCTTTCCATTTTC...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGATCAGGCCGAACATGGTaGCACACACCATTAATTCCA +
Preference number: 2 (lower is better)
Translates to: WCFSELFIFIRISKPSPRSGRTW*HTPLIP
Trigger: TGGAATTAATGGTGTGTGCCACCATGTTCGGCCTGA...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACTCAGGCCGAACATGGTaGCACACACCATTAATTCCA +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHSGRTW*HTPLIP
Trigger: TGGAATTAATGGTGTGTGCCACCATGTTCGGCCTGA...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCCCTCACCCAGATTCTaGAATAAAATCCTAATACAA +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNPSPRF*NKILIQ
Trigger: TTGTATTAGGATTTTATTCCAGAATCTGGGTGAGGG...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTACCCTCACCCAGATTCTaGAATAAAATCCTAATACAA +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLPSPRF*NKILIQ
Trigger: TTGTATTAGGATTTTATTCCAGAATCTGGGTGAGGG...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACACACTCCTCCATTGCTaGTGGGATTGCAAGCTTGTA +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHTLLHC*WDCKLV
Trigger: TACAAGCTTGCAATCCCACCAGCAATGGAGGAGTGT...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACATGCAGGCAAGGATGTaGAGAAAGAGGAACACTCCT +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHMQARM*RKRNTP
Trigger: AGGAGTGTTCCTCTTTCTCCACATCCTTGCCTGCAT...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTATCATGGATATCAATaGGAGTTATTTCCCCTGGAA +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNYHGYQ*ELFPLE
Trigger: TTCCAGGGGAAATAACTCCCATTGATATCCATGATA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGAATCAGCATCAACAAATaGAGGGGAAGTTCCCAGCCA +
Preference number: 2 (lower is better)
Translates to: WCFSELFIFIRISKPSPRISINK*RGSSQP
Trigger: TGGCTGGGAACTTCCCCTCCATTTGTTGATGCTGAT...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGATCAGATTATACAGATTaGTCCAATAAACTGAGGTCC +
Preference number: 2 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGSDYTD*SNKLRS
Trigger: GGACCTCAGTTTATTGGATCAATCTGTATAATCTGA...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGACAGCCAGGGCTACATTaGGAAACCCTGTTTCTAAAA +
Preference number: 2 (lower is better)
Translates to: WCFSELFIFIRISKPSPRQPGLH*ETLFLK
Trigger: TTTTAGAAACAGGGTTTCTCAATGTAGCCCTGGCTG...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACCAGCCAGGGCTACATTaGGAAACCCTGTTTCTAAAA +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHQPGLH*ETLFLK
Trigger: TTTTAGAAACAGGGTTTCTCAATGTAGCCCTGGCTG...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGACTGGACAGATGTAAATaGTACTGTTTTTCCAGTTAC +
Preference number: 2 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGLDRCK*YCFSSY
Trigger: GTAACTGGAAAAACAGTATCATTTACATCTGTCCAG...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGATGTTATTTCCCAGTCTaGATTTCCCTAATAGTTAGC +
Preference number: 2 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGCYFPV*ISLIVS
Trigger: GCTAACTATTAGGGAAATTCAGACTGGGAAATAACA...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACTTGTACAACCAATCTTaGTGTCAGTCTGGAGGTTCC +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHLYNQS*CQSGGS
Trigger: GGAACCTCCAGACTGACATCAAGATTGGTTGTACAA...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAAATAAGAACACATGCTaGACTTTGTTCATAGCAGCC +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRNKNTC*TLFIAA
Trigger: GGCTGCTATGAACAAAGTGCAGCATGTGTTCTTATT...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAATGCCTAACCAAATACTaGACATGGCCAGATGATTTT +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQECLTKY*TWPDDF
Trigger: AAAATCATCTGGCCATGTGCAGTATTTGGTTAGGCA...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACATTTTGGGGCAAAGATaGAAAGAAGAAGCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHILGQR*KEEALH
Trigger: GTGCAGGGCTTCTTCTTTGCATCTTTGCCCCAAAAT...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACTCACTATGGGTTGAATaGATGTGTGGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHSLWVE*MCGVCV
Trigger: CACACACACACCACACATCCATTCAACCCATAGTGA...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGACCCTCACCCAGATTCTaGAATAAAATCCTAATACAA +
Preference number: 2 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGPSPRF*NKILIQ
Trigger: TTGTATTAGGATTTTATTCCAGAATCTGGGTGAGGG...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTCATACCAGTCAGAATaGCTAAGATCAAAAATTCAG +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNSYQSE*LRSKIQ
Trigger: CTGAATTTTTGATCTTAGCCATTCTGACTGGTATGA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAAGGCCACCAACAGATTaGGAAAGGATTTTTACTGAT +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQERPPTD*ERIFTD
Trigger: ATCAGTAAAAATCCTTTCCCAATCTGTTGGTGGCCT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAAAGCTCAAGTCTAAGTaGATCAAAGACAGCCACATA +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEKLKSK*IKDSHI
Trigger: TATGTGGCTGTCTTTGATCCACTTAGACTTGAGCTT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAAAGCTCAAGTCTAAGTaGATCAAAGACAGCCACATA +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRKLKSK*IKDSHI
Trigger: TATGTGGCTGTCTTTGATCCACTTAGACTTGAGCTT...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAAAAACTGCATGGTACTaGTATAGTGACTGTCAGGTA +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRKTAWY*YSDCQV
Trigger: TACCTGACAGTCACTATACCAGTACCATGCAGTTTT...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAGTAATAAAAACTGCATaGTACTGGTATAGTGACTGT +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLVIKTA*YWYSDC
Trigger: ACAGTCACTATACCAGTACCATGCAGTTTTTATTAC...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATAATCTACAGATTCAATaGAATCCCCATCAAAATTCC +
Preference number: 2 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNNLQIQ*NPHQNS
Trigger: GGAATTTTGATGGGGATTCCATTGAATCTGTAGATT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAAATCTACAGATTCAATaGAATCCCCATCAAAATTCC +
Preference number: 2 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLNLQIQ*NPHQNS
Trigger: GGAATTTTGATGGGGATTCCATTGAATCTGTAGATT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAGAAGACCTCAGAAAATaGAAAGATCTGCCAAGCTAT +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEEDLRK*KDLPSY
Trigger: ATAGCTTGGCAGATCTTTCCATTTTCTGAGGTCTTC...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGACAAACAATGATGATGTaGCCATGTACCATGTGTAGA +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRQTMMM*PCTMCR
Trigger: TCTACACATGGTACATGGCCACATCATCATTGTTTG...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAATCAGATTATACAGATTaGTCCAATAAACTGAGGTCC +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQESDYTD*SNKLRS
Trigger: GGACCTCAGTTTATTGGATCAATCTGTATAATCTGA...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAACAAACAAGAAAGACATaGTCTCTCCTTTACTTCACA +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEQTRKT*SLLYFT
Trigger: TGTGAAGTAAAGGAGAGATCATGTCTTTCTTGTTTG...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGACAAACAAGAAAGACATaGTCTCTCCTTTACTTCACA +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRQTRKT*SLLYFT
Trigger: TGTGAAGTAAAGGAGAGATCATGTCTTTCTTGTTTG...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAACTGGACAGATGTAAATaGTACTGTTTTTCCAGTTAC +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQELDRCK*YCFSSY
Trigger: GTAACTGGAAAAACAGTATCATTTACATCTGTCCAG...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACAATATCACTATGGGTTaGATGGATGTGTGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHNITMG*MDVWCV
Trigger: CACACACCACACATCCATTCAACCCATAGTGATATT...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGAAATATCACTATGGGTTaGATGGATGTGTGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: WCFSELFIFIRISKPSPRNITMG*MDVWCV
Trigger: CACACACCACACATCCATTCAACCCATAGTGATATT...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACGGTTCCTCAGAAAATTaGACACAATGCTACTGGAAG +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHGSSEN*TQCYWK
Trigger: CTTCCAGTAGCATTGTGTTCAATTTTCTGAGGAACC...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAATCAATGGAATTGAATTaGAGACCCAGAAATGAATCC +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQESMELN*RPRNES
Trigger: GGATTCATTTCTGGGTCTTCAATTCAATTCCATTGA...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGATCAATGGAATTGAATTaGAGACCCAGAAATGAATCC +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRSMELN*RPRNES
Trigger: GGATTCATTTCTGGGTCTTCAATTCAATTCCATTGA...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAATTTGAAGAAAGCAGTTaGAGAAGACCTCAGAAAATG +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEFEESS*RRPQKM
Trigger: CATTTTCTGAGGTCTTCTTCAACTGCTTTCTTCAAA...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACCCACAGAGAATCAGCTaGATCATGGTGCATATAAGA +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHPQRIS*IMVHIR
Trigger: TCTTATATGCACCATGATTCAGCTGATTCTCTGTGG...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGATTTCTCTGCCTCCTATaGCAAGATATTTTCCAAGTA +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRFLCLL*QDIFQV
Trigger: TACTTGGAAAATATCTTGGCATAGGAGGCAGAGAAA...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAAACAGGTATGCATGTTaGATTTACCCAAGTAGTGTT +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQENRYAC*IYPSSV
Trigger: AACACTACTTGGGTAAATGCAACATGCATACCTGTT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACATTGCAAACTTTATATaGCCCAGTTCAGGGGAATGC +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHIANFI*PSSGEC
Trigger: GCATTCCCCTGAACTGGGGCATATAAAGTTTGCAAT...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAGAAAATGGAAAGATCTaGCAAGCTATTGGATTGGTA +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEENGKI*QAIGLV
Trigger: TACCAATCCAATAGCTTGGCAGATCTTTCCATTTTC...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACACATGGACCAATCCATaGCTACCATGTATTTCATCC +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHTWTNP*LPCISS
Trigger: GGATGAAATACATGGTAGCCATGGATTGGTCCATGT...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAACCCTCACCCAGATTCTaGAATAAAATCCTAATACAA +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEPSPRF*NKILIQ
Trigger: TTGTATTAGGATTTTATTCCAGAATCTGGGTGAGGG...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGACCCTCACCCAGATTCTaGAATAAAATCCTAATACAA +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRPSPRF*NKILIQ
Trigger: TTGTATTAGGATTTTATTCCAGAATCTGGGTGAGGG...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACAATAAGAACACATGCTaGACTTTGTTCATAGCAGCC +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHNKNTC*TLFIAA
Trigger: GGCTGCTATGAACAAAGTGCAGCATGTGTTCTTATT...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGACATAATCCCATGTCCTaGAATATCATGTTACAAAGA +
Preference number: 2 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRHNPMS*NIMLQR
Trigger: TCTTTGTAACATGATATTCCAGGACATGGGATTATG...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAACATAATCCCATGTCCTaGAATATCATGTTACAAAGA +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEHNPMS*NIMLQR
Trigger: TCTTTGTAACATGATATTCCAGGACATGGGATTATG...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAATCATACCAGTCAGAATaGCTAAGATCAAAAATTCAG +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQESYQSE*LRSKIQ
Trigger: CTGAATTTTTGATCTTAGCCATTCTGACTGGTATGA...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAGTAATAAAAACTGCATaGTACTGGTATAGTGACTGT +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEVIKTA*YWYSDC
Trigger: ACAGTCACTATACCAGTACCATGCAGTTTTTATTAC...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAAATCTACAGATTCAATaGAATCCCCATCAAAATTCC +
Preference number: 2 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQENLQIQ*NPHQNS
Trigger: GGAATTTTGATGGGGATTCCATTGAATCTGTAGATT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACCAAACAATGATGATGTaGCCATGTACCATGTGTAGA +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHQTMMM*PCTMCR
Trigger: TCTACACATGGTACATGGCCACATCATCATTGTTTG...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGACAAACAATGATGATGTaGCCATGTACCATGTGTAGA +
Preference number: 2 (lower is better)
Translates to: WCFSELFIFIRISKPSPRQTMMM*PCTMCR
Trigger: TCTACACATGGTACATGGCCACATCATCATTGTTTG...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGATCAGATTATACAGATTaGTCCAATAAACTGAGGTCC +
Preference number: 2 (lower is better)
Translates to: WCFSELFIFIRISKPSPRSDYTD*SNKLRS
Trigger: GGACCTCAGTTTATTGGATCAATCTGTATAATCTGA...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACTCAGATTATACAGATTaGTCCAATAAACTGAGGTCC +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHSDYTD*SNKLRS
Trigger: GGACCTCAGTTTATTGGATCAATCTGTATAATCTGA...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACCAAACAAGAAAGACATaGTCTCTCCTTTACTTCACA +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHQTRKT*SLLYFT
Trigger: TGTGAAGTAAAGGAGAGATCATGTCTTTCTTGTTTG...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGACAAACAAGAAAGACATaGTCTCTCCTTTACTTCACA +
Preference number: 2 (lower is better)
Translates to: WCFSELFIFIRISKPSPRQTRKT*SLLYFT
Trigger: TGTGAAGTAAAGGAGAGATCATGTCTTTCTTGTTTG...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR TCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGATGTTATTTCCCAGTCTaGATTTCCCTAATAGTTAGC +
Preference number: 2 (lower is better)
Translates to: WCFSELFIFIRISKPSPRCYFPV*ISLIVS
Trigger: GCTAACTATTAGGGAAATTCAGACTGGGAAATAACA...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR GCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGATTTCTCTGCCTCCTATaGCAAGATATTTTCCAAGTA +
Preference number: 2 (lower is better)
Translates to: WCFSELFIFIRISKPSPRFLCLL*QDIFQV
Trigger: TACTTGGAAAATATCTTGGCATAGGAGGCAGAGAAA...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACCATAATCCCATGTCCTaGAATATCATGTTACAAAGA +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHHNPMS*NIMLQR
Trigger: TCTTTGTAACATGATATTCCAGGACATGGGATTATG...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGACATAATCCCATGTCCTaGAATATCATGTTACAAAGA +
Preference number: 2 (lower is better)
Translates to: WCFSELFIFIRISKPSPRHNPMS*NIMLQR
Trigger: TCTTTGTAACATGATATTCCAGGACATGGGATTATG...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACTCATACCAGTCAGAATaGCTAAGATCAAAAATTCAG +
Preference number: 2 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHSYQSE*LRSKIQ
Trigger: CTGAATTTTTGATCTTAGCCATTCTGACTGGTATGA...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR CCA 72 bp ACAAGCAAAAGGAGAAGTACTTCTCAGCAGGAGGAATaGGGCAGCAGAAATGCACCTCAGCAGGAGGGATGG +
Preference number: 3 (lower is better)
Translates to: TSKRRSTSQQEE*GSRNAPQQEGW
Trigger: CCATCCCTCCTGCTGAGGTGCATTTCTGCTGCCCCATTCCTCCTGCTGAGAAGTACTTCTCCTTTTGCTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR CCA 72 bp CCGAACATGGTGGCACACACCATTAATTCCAGCACTTaGGAGGCAGAGGAAGGCAAATTTCTGAGTTCAAGG +
Preference number: 3 (lower is better)
Translates to: PNMVAHTINSST*EAEEGKFLSSR
Trigger: CCTTGAACTCAGAAATTTGCCTTCCTCTGCCTCCCAAGTGCTGGAATTAATGGTGTGTGCCACCATGTTCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR CCA 72 bp TGCATCAGTGGCCCACTTTTGACTCCCTGTTCTTCTTaGGTGGAGAGGCCCAATTCAGAGATCAGGACAATA +
Preference number: 3 (lower is better)
Translates to: CISGPLLTPCSS*VERPNSEIRTI
Trigger: TATTGTCCTGATCTCTGAATTGGGCCTCTCCACCCAAGAAGAACAGGGAGTCAAAAGTGGGCCACTGATGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR GCA 72 bp GGAGAAAGAGGAACACTCCTCCATTGCTGGTGGGATTaGAAGCTTGTACAACCAATCTTGATGTCAGTCTGG +
Preference number: 3 (lower is better)
Translates to: GERGTLLHCWWD*KLVQPILMSVW
Trigger: CCAGACTGACATCAAGATTGGTTGTACAAGCTTGCAATCCCACCAGCAATGGAGGAGTGTTCCTCTTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR CCA 72 bp AATGCACATTCAAAAGACAGGATCTCAGGCCGAACATaGTGGCACACACCATTAATTCCAGCACTTGGGAGG +
Preference number: 3 (lower is better)
Translates to: NAHSKDRISGRT*WHTPLIPALGR
Trigger: CCTCCCAAGTGCTGGAATTAATGGTGTGTGCCACCATGTTCGGCCTGAGATCCTGTCTTTTGAATGTGCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCCTGGGACAGTGACCTaGAAGGCCAGTACTACAGTA +
Preference number: 3 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNPGTVT*KASTTV
Trigger: TACTGTAGTACTGGCCTTCAAGGTCACTGTCCCAGG...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR CCA 72 bp CAAGGATGTGGAGAAAGAGGAACACTCCTCCATTGCTaGTGGGATTGCAAGCTTGTACAACCAATCTTGATG +
Preference number: 3 (lower is better)
Translates to: QGCGERGTLLHC*WDCKLVQPILM
Trigger: CATCAAGATTGGTTGTACAAGCTTGCAATCCCACCAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAGGTAGGAAAACAGAGTaGGGGGAAAGCATAGGGAAC +
Preference number: 3 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLGRKTE*GESIGN
Trigger: GTTCCCTATGCTTTCCCCCAACTCTGTTTTCCTACC...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATGGTAGGAAAACAGAGTaGGGGGAAAGCATAGGGAAC +
Preference number: 3 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNGRKTE*GESIGN
Trigger: GTTCCCTATGCTTTCCCCCAACTCTGTTTTCCTACC...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTCTTGTACAACCAATCTaGATGTCAGTCTGGAGGTTC +
Preference number: 3 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGALVQPI*MSVWRF
Trigger: GAACCTCCAGACTGACATCAAGATTGGTTGTACAAG...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGACCTGGGACAGTGACCTaGAAGGCCAGTACTACAGTA +
Preference number: 3 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGPGTVT*KASTTV
Trigger: TACTGTAGTACTGGCCTTCAAGGTCACTGTCCCAGG...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR GCA 72 bp AGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATaGAGGCAAGGATGTGGAGAAAGAGGAACACTCCTC +
Preference number: 3 (lower is better)
Translates to: RMAKIKNSGDSR*RQGCGERGTLL
Trigger: GAGGAGTGTTCCTCTTTCTCCACATCCTTGCCTGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTCAGGAAAGAACCCATTaGTCTCTCAACAGAAGAATG +
Preference number: 3 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAQERTH*SLNRRM
Trigger: CATTCTTCTGTTGAGAGACAAATGGGTTCTTTCCTG...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTGGAACAATCTGTGGTaGTTCTCAGAGCAGTGCATC +
Preference number: 3 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNWNNLW*FSEQCI
Trigger: GATGCACTGCTCTGAGAACAACCACAGATTGTTCCA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR TCA 72 bp ACACAATGCTACTGGAAGATCCAGCAATACCTCTCCTaGGCATATACCCAGAAGAAGGTCCAACTGGTAATA +
Preference number: 3 (lower is better)
Translates to: TQCYWKIQQYLS*AYTQKKVQLVI
Trigger: TATTACCAGTTGGACCTTCTTCTGGGTATATGCTCAGGAGAGGTATTGCTGGATCTTCCAGTAGCATTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR TCA 72 bp GCCCATGTAACCAAGGACAAAGTAGAAGGCAATCACTaGACCTTTGTTGCAAACAATGATGATGTGGCCATG +
Preference number: 3 (lower is better)
Translates to: AHVTKDKVEGNH*TFVANNDDVAM
Trigger: CATGGCCACATCATCATTGTTTGCAACAAAGGTTCAGTGATTGCCTTCTACTTTGTCCTTGGTTACATGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR GCA 72 bp TACATTTACATATCCCTTGATATTGCAAACTTTATATaGCCCAGTTCAGGGGAATGCCAGCGCCAAGAAGGG +
Preference number: 3 (lower is better)
Translates to: YIYISLDIANFI*PSSGECQRQEG
Trigger: CCCTTCTTGGCGCTGGCATTCCCCTGAACTGGGGCATATAAAGTTTGCAATATCAAGGGATATGTAAATGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAGGTAGGAAAACAGAGTaGGGGGAAAGCATAGGGAAC +
Preference number: 3 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEGRKTE*GESIGN
Trigger: GTTCCCTATGCTTTCCCCCAACTCTGTTTTCCTACC...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAGGTAGGAAAACAGAGTaGGGGGAAAGCATAGGGAAC +
Preference number: 3 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRGRKTE*GESIGN
Trigger: GTTCCCTATGCTTTCCCCCAACTCTGTTTTCCTACC...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTAGGTTCCTCAGAAAATaGAACACAATGCTACTGGAA +
Preference number: 3 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGARFLRK*NTMLLE
Trigger: TTCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCT...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTACTTGTACAACCAATCTaGATGTCAGTCTGGAGGTTC +
Preference number: 3 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLLVQPI*MSVWRF
Trigger: GAACCTCCAGACTGACATCAAGATTGGTTGTACAAG...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTTGTACAACCAATCTaGATGTCAGTCTGGAGGTTC +
Preference number: 3 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNLVQPI*MSVWRF
Trigger: GAACCTCCAGACTGACATCAAGATTGGTTGTACAAG...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTCAAATCAAAACAACCTaGAGATTCCACCTCATACCA +
Preference number: 3 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAQIKTT*RFHLIP
Trigger: TGGTATGAGGTGGAATCTCAAGGTTGTTTTGATTTG...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTAGGGACAAGACAAAGTaGCCAACACATTTGTATCTA +
Preference number: 3 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGARDKTK*PTHLYL
Trigger: TAGATACAAATGTGTTGGCAACTTTGTCTTGTCCCT...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTCTTACAAACTCCAGGTaGACAAAAATCTTCCCTCAT +
Preference number: 3 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGALTNSR*TKIFPH
Trigger: ATGAGGGAAGATTTTTGTCAACCTGGAGTTTGTAAG...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAGAAGAAGCCCTGCACTaGAGGCCAAGATACAGAAAA +
Preference number: 3 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGEEALH*RPRYRK
Trigger: TTTTCTGTATCTTGGCCTCAAGTGCAGGGCTTCTTC...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR GCA 72 bp GTCAACTGTGCTTCAAACACAAAATTCCTGATTCATTaGTCCCTGAGTGGCATTTGTACCTCCTGCATTGTT +
Preference number: 3 (lower is better)
Translates to: VNCASNTKFLIH*SLSGICTSCIV
Trigger: AACAATGCAGGAGGTACAAATGCCACTCAGGGAGCAATGAATCAGGAATTTTGTGTTTGAAGCACAGTTGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTACATATCCCTTGATATaGCAAACTTTATATGCCCCA +
Preference number: 3 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGATYPLI*QTLYAP
Trigger: TGGGGCATATAAAGTTTGCAATATCAAGGGATATGT...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTACAGGAAAGAACCCATTaGTCTCTCAACAGAAGAATG +
Preference number: 3 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLQERTH*SLNRRM
Trigger: CATTCTTCTGTTGAGAGACAAATGGGTTCTTTCCTG...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCAGGAAAGAACCCATTaGTCTCTCAACAGAAGAATG +
Preference number: 3 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNQERTH*SLNRRM
Trigger: CATTCTTCTGTTGAGAGACAAATGGGTTCTTTCCTG...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTGTATCAGGAAAAATATaGAAACAGTCCCATAACCAC +
Preference number: 3 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAVSGKI*KQSHNH
Trigger: GTGGTTATGGGACTGTTTCAATATTTTTCCTGATAC...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATAAAATTCCTGATTCATaGCTCCCTGAGTGGCATTTG +
Preference number: 3 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNKIPDS*LPEWHL
Trigger: CAAATGCCACTCAGGGAGCAATGAATCAGGAATTTT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAAAAATTCCTGATTCATaGCTCCCTGAGTGGCATTTG +
Preference number: 3 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLKIPDS*LPEWHL
Trigger: CAAATGCCACTCAGGGAGCAATGAATCAGGAATTTT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGACCTGGGACAGTGACCTaGAAGGCCAGTACTACAGTA +
Preference number: 3 (lower is better)
Translates to: WCFSELFIFIRISKPSPRPGTVT*KASTTV
Trigger: TACTGTAGTACTGGCCTTCAAGGTCACTGTCCCAGG...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAGAAGAAGCCCTGCACTaGAGGCCAAGATACAGAAAA +
Preference number: 3 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEEEALH*RPRYRK
Trigger: TTTTCTGTATCTTGGCCTCAAGTGCAGGGCTTCTTC...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR CCA 72 bp GATAGTGTCAATCAGGCAAAAAGGCCACCAACAGATTaGGAAAGGATTTTTACTGATCCTAAATCTGACAGG +
Preference number: 3 (lower is better)
Translates to: DSVNQAKRPPTD*ERIFTDPKSDR
Trigger: CCTGTCAGATTTAGGATCAGTAAAAATCCTTTCCCAATCTGTTGGTGGCCTTTTTGCCTGATTGACACTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR CCA 72 bp CCATTCTTATCTCCTTGTACAAAGCTCAAGTCTAAGTaGATCAAAGACAGCCACATAAAACCAGAGACACTG +
Preference number: 3 (lower is better)
Translates to: PFLSPCTKLKSK*IKDSHIKPETL
Trigger: CAGTGTCTCTGGTTTTATGTGGCTGTCTTTGATCCACTTAGACTTGAGCTTTGTACAAGGAGATAAGAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACGGTAGGAAAACAGAGTaGGGGGAAAGCATAGGGAAC +
Preference number: 3 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHGRKTE*GESIGN
Trigger: GTTCCCTATGCTTTCCCCCAACTCTGTTTTCCTACC...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGACAGGAAAGAACCCATTaGTCTCTCAACAGAAGAATG +
Preference number: 3 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGQERTH*SLNRRM
Trigger: CATTCTTCTGTTGAGAGACAAATGGGTTCTTTCCTG...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAAGGTTCCTCAGAAAATaGAACACAATGCTACTGGAA +
Preference number: 3 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLRFLRK*NTMLLE
Trigger: TTCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGACTTGTACAACCAATCTaGATGTCAGTCTGGAGGTTC +
Preference number: 3 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRLVQPI*MSVWRF
Trigger: GAACCTCCAGACTGACATCAAGATTGGTTGTACAAG...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTACAAATCAAAACAACCTaGAGATTCCACCTCATACCA +
Preference number: 3 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLQIKTT*RFHLIP
Trigger: TGGTATGAGGTGGAATCTCAAGGTTGTTTTGATTTG...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAAGGGACAAGACAAAGTaGCCAACACATTTGTATCTA +
Preference number: 3 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLRDKTK*PTHLYL
Trigger: TAGATACAAATGTGTTGGCAACTTTGTCTTGTCCCT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTTGCTCCTGAATCTATaGCCATTCTTTTCACTACAG +
Preference number: 3 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNLLLNL*PFFSLQ
Trigger: CTGTAGTGAAAAGAATGGCAATAGATTCAGGAGCAA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATAATAGCCACAATTTTTaGGAGACAGAGAGTATGGTC +
Preference number: 3 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNNSHNF*ETESMV
Trigger: GACCATACTCTCTGTCTCCAAAAAATTGTGGCTATT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAGTCCAGGTCATGGGTTaGATTTTTATTATACAGCAT +
Preference number: 3 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLVQVMG*IFIIQH
Trigger: ATGCTGTATAATAAAAATCAAACCCATGACCTGGAC...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATGTCCAGGTCATGGGTTaGATTTTTATTATACAGCAT +
Preference number: 3 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNVQVMG*IFIIQH
Trigger: ATGCTGTATAATAAAAATCAAACCCATGACCTGGAC...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAAAATATCACTATGGGTaGAATGGATGTGTGGTGTGT +
Preference number: 3 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGKYHYG*NGCVVC
Trigger: ACACACCACACATCCATTCAACCCATAGTGATATTT...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATACATATCCCTTGATATaGCAAACTTTATATGCCCCA +
Preference number: 3 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNTYPLI*QTLYAP
Trigger: TGGGGCATATAAAGTTTGCAATATCAAGGGATATGT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAACAGGAAAGAACCCATTaGTCTCTCAACAGAAGAATG +
Preference number: 3 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEQERTH*SLNRRM
Trigger: CATTCTTCTGTTGAGAGACAAATGGGTTCTTTCCTG...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGACAGGAAAGAACCCATTaGTCTCTCAACAGAAGAATG +
Preference number: 3 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRQERTH*SLNRRM
Trigger: CATTCTTCTGTTGAGAGACAAATGGGTTCTTTCCTG...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTACAGAACAGCAATGTTTaGTGCTGTAAGATCAAGAAT +
Preference number: 3 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLQNSNV*CCKIKN
Trigger: ATTCTTGATCTTACAGCACAAAACATTGCTGTTCTG...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAGTATCAGGAAAAATATaGAAACAGTCCCATAACCAC +
Preference number: 3 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLVSGKI*KQSHNH
Trigger: GTGGTTATGGGACTGTTTCAATATTTTTCCTGATAC...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAAATAGCCACAATTTTTaGGAGACAGAGAGTATGGTC +
Preference number: 3 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGNSHNF*ETESMV
Trigger: GACCATACTCTCTGTCTCCAAAAAATTGTGGCTATT...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATGACATAACTGAGAGTTaGGTTATTGGCTTTGACTAT +
Preference number: 3 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNDITES*VIGFDY
Trigger: ATAGTCAAAGCCAATAACCAAACTCTCAGTTATGTC...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAGACATAACTGAGAGTTaGGTTATTGGCTTTGACTAT +
Preference number: 3 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLDITES*VIGFDY
Trigger: ATAGTCAAAGCCAATAACCAAACTCTCAGTTATGTC...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR CCA 72 bp GCAATCACTGAACCTTTGTTGCAAACAATGATGATGTaGCCATGTACCATGTGTAGATCAGCATCAACAAAT +
Preference number: 3 (lower is better)
Translates to: AITEPLLQTMMM*PCTMCRSASTN
Trigger: ATTTGTTGATGCTGATCTACACATGGTACATGGCCACATCATCATTGTTTGCAACAAAGGTTCAGTGATTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAGTCCAGGTCATGGGTTaGATTTTTATTATACAGCAT +
Preference number: 3 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGVQVMG*IFIIQH
Trigger: ATGCTGTATAATAAAAATCAAACCCATGACCTGGAC...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAAAATATCACTATGGGTaGAATGGATGTGTGGTGTGT +
Preference number: 3 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRKYHYG*NGCVVC
Trigger: ACACACCACACATCCATTCAACCCATAGTGATATTT...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAAAATATCACTATGGGTaGAATGGATGTGTGGTGTGT +
Preference number: 3 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEKYHYG*NGCVVC
Trigger: ACACACCACACATCCATTCAACCCATAGTGATATTT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAACATATCCCTTGATATaGCAAACTTTATATGCCCCA +
Preference number: 3 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGTYPLI*QTLYAP
Trigger: TGGGGCATATAAAGTTTGCAATATCAAGGGATATGT...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAAGGTTCCTCAGAAAATaGAACACAATGCTACTGGAA +
Preference number: 3 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQERFLRK*NTMLLE
Trigger: TTCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACCTTGTACAACCAATCTaGATGTCAGTCTGGAGGTTC +
Preference number: 3 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHLVQPI*MSVWRF
Trigger: GAACCTCCAGACTGACATCAAGATTGGTTGTACAAG...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGACAAATCAAAACAACCTaGAGATTCCACCTCATACCA +
Preference number: 3 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRQIKTT*RFHLIP
Trigger: TGGTATGAGGTGGAATCTCAAGGTTGTTTTGATTTG...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAACAAATCAAAACAACCTaGAGATTCCACCTCATACCA +
Preference number: 3 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEQIKTT*RFHLIP
Trigger: TGGTATGAGGTGGAATCTCAAGGTTGTTTTGATTTG...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAAATAGCCACAATTTTTaGGAGACAGAGAGTATGGTC +
Preference number: 3 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRNSHNF*ETESMV
Trigger: GACCATACTCTCTGTCTCCAAAAAATTGTGGCTATT...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR TCA 72 bp ATCATCTCATTGAACATTAGTTGCAAAGAAGACTCCTaGGATCATACCAGCTGCCTAGAAGAATGGGAAAAA +
Preference number: 3 (lower is better)
Translates to: IISLNISCKEDS*DHTSCLEEWEK
Trigger: TTTTTCCCATTCTTCTAGGCAGCTGGTATGATCTCAGGAGTCTTCTTTGCAACTAATGTTCAATGAGATGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR TCA 72 bp AGTACACAAATTCCTTTTATGAGGCCACCGTTACTCTaGTACCTAAACCACACAAAAGACCCAAGAAAGAAA +
Preference number: 3 (lower is better)
Translates to: STQIPFMRPPLL*YLNHTKDPRKK
Trigger: TTTCTTTCTTGGGTCTTTTGTGTGGTTTAGGTATCAGAGTAACGGTGGCCTCATAAAAGGAATTTGTGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR CCA 72 bp ATAGATTATTCAGAACTACACACATGGACCAATCCATaGCTACCATGTATTTCATCCATGAGAATGACACAG +
Preference number: 3 (lower is better)
Translates to: IDYSELHTWTNP*LPCISSMRMTQ
Trigger: CTGTGTCATTCTCATGGATGAAATACATGGTAGCCATGGATTGGTCCATGTGTGTAGTTCTGAATAATCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAGTCCAGGTCATGGGTTaGATTTTTATTATACAGCAT +
Preference number: 3 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRVQVMG*IFIIQH
Trigger: ATGCTGTATAATAAAAATCAAACCCATGACCTGGAC...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAACATATCCCTTGATATaGCAAACTTTATATGCCCCA +
Preference number: 3 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQETYPLI*QTLYAP
Trigger: TGGGGCATATAAAGTTTGCAATATCAAGGGATATGT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACCAGGAAAGAACCCATTaGTCTCTCAACAGAAGAATG +
Preference number: 3 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHQERTH*SLNRRM
Trigger: CATTCTTCTGTTGAGAGACAAATGGGTTCTTTCCTG...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAGTATCAGGAAAAATATaGAAACAGTCCCATAACCAC +
Preference number: 3 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEVSGKI*KQSHNH
Trigger: GTGGTTATGGGACTGTTTCAATATTTTTCCTGATAC...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAGACATAACTGAGAGTTaGGTTATTGGCTTTGACTAT +
Preference number: 3 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRDITES*VIGFDY
Trigger: ATAGTCAAAGCCAATAACCAAACTCTCAGTTATGTC...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR TCA 72 bp CCAGTAACCCAAACAGACATATTTCCTTGCTTTCTATaGTCGCATAAATCAACCAATGTCTTTCCTACACAT +
Preference number: 3 (lower is better)
Translates to: PVTQTDIFPCFL*SHKSTNVFPTH
Trigger: ATGTGTAGGAAAGACATTGGTTGATTTATGCGATCATAGAAAGCAAGGAAATATGTCTGTTTGGGTTACTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACAAATATCACTATGGGTaGAATGGATGTGTGGTGTGT +
Preference number: 3 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHKYHYG*NGCVVC
Trigger: ACACACCACACATCCATTCAACCCATAGTGATATTT...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGAAAATATCACTATGGGTaGAATGGATGTGTGGTGTGT +
Preference number: 3 (lower is better)
Translates to: WCFSELFIFIRISKPSPRKYHYG*NGCVVC
Trigger: ACACACCACACATCCATTCAACCCATAGTGATATTT...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACAGGTTCCTCAGAAAATaGAACACAATGCTACTGGAA +
Preference number: 3 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHRFLRK*NTMLLE
Trigger: TTCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCT...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACCAAATCAAAACAACCTaGAGATTCCACCTCATACCA +
Preference number: 3 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHQIKTT*RFHLIP
Trigger: TGGTATGAGGTGGAATCTCAAGGTTGTTTTGATTTG...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGAGTCCAGGTCATGGGTTaGATTTTTATTATACAGCAT +
Preference number: 3 (lower is better)
Translates to: WCFSELFIFIRISKPSPRVQVMG*IFIIQH
Trigger: ATGCTGTATAATAAAAATCAAACCCATGACCTGGAC...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR-3UTR CAA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACGACATAACTGAGAGTTaGGTTATTGGCTTTGACTAT +
Preference number: 3 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHDITES*VIGFDY
Trigger: ATAGTCAAAGCCAATAACCAAACTCTCAGTTATGTC...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
3UTR CCA 72 bp GTAGTAATTAAAAATTGCCTAACCAAATACTGCACATaGCCAGATGATTTTAGTGCAGAATTCTATCAGACC +
Preference number: 3 (lower is better)
Translates to: VVIKNCLTKYCT*PDDFSAEFYQT
Trigger: GGTCTGATAGAATTCTGCACTAAAATCATCTGGCCATGTGCAGTATTTGGTTAGGCAATTTTTAATTACTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR GCA 72 bp AGGAGAAACATTCCTAAACAGAACAGCAATGTTTTGTaGTGTAAGATCAAGAATCAACAAATGCAATCTCAT +
Preference number: 3 (lower is better)
Translates to: RRNIPKQNSNVL*CKIKNQQMQSH
Trigger: ATGAGATTGCATTTGTTGATTCTTGATCTTACAGCACAAAACATTGCTGTTCTGTTTAGGAATGTTTCTCCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTCCTGCGGGGATTTTCTaGGTCCTGGTCTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAPAGIF*VLVCKA
Trigger: TGCCTTGCAGACCAGGACTCAGAAAATCCCCGCAGG...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR CAA 72 bp GTGCATCAGTGGCCCACTTTTGACTCCCTGTTCTTCTaGGGTGGAGAGGCCCAATTCAGAGATCAGGACAAT +
Preference number: 4 (lower is better)
Translates to: VHQWPTFDSLFF*GGEAQFRDQDN
Trigger: ATTGTCCTGATCTCTGAATTGGGCCTCTCCACCCAAGAAGAACAGGGAGTCAAAAGTGGGCCACTGATGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTACCTGCGGGGATTTTCTaGGTCCTGGTCTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLPAGIF*VLVCKA
Trigger: TGCCTTGCAGACCAGGACTCAGAAAATCCCCGCAGG...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR CAA 72 bp CAGGCAAGGATGTGGAGAAAGAGGAACACTCCTCCATaGCTGGTGGGATTGCAAGCTTGTACAACCAATCTT +
Preference number: 4 (lower is better)
Translates to: QARMWRKRNTPP*LVGLQACTTNL
Trigger: AAGATTGGTTGTACAAGCTTGCAATCCCACCAGCAATGGAGGAGTGTTCCTCTTTCTCCACATCCTTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGACCTGCGGGGATTTTCTaGGTCCTGGTCTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRPAGIF*VLVCKA
Trigger: TGCCTTGCAGACCAGGACTCAGAAAATCCCCGCAGG...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAACCTGCGGGGATTTTCTaGGTCCTGGTCTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEPAGIF*VLVCKA
Trigger: TGCCTTGCAGACCAGGACTCAGAAAATCCCCGCAGG...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAGGCAGCCACAGTGAATaGAATGGCAAATGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLGSHSE*NGKCAL
Trigger: CAGAGCACATTTGCCATTTCATTCACTGTGGCTGCC...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR GCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTCATGTGTCTACTTGTTaGAGCAGCATCTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAHVSTC*SSISWS
Trigger: ACTCCATGAGATGCTGCTGCAACAAGTAGACACATG...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTATATCCTTTCCTTCCTaGGGGGATTTTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAISFPS*GDFLSP
Trigger: AGGACTCAGAAAATCCCCGCAGGAAGGAAAGGATAT...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTATGAAATGGCAAATGTaGTCTGCTGCAGGACACAGA +
Preference number: 4 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAMKWQM*SAAGHR
Trigger: TCTGTGTCCTGCAGCAGAGCACATTTGCCATTTCAT...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTTCAAATGGTTGGTCTTaGGTGTCACGTGCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGASNGWS*VSRACL
Trigger: TAGACAAGCACGTGACACCCAAGACCAACCATTTGA...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTCAGTTCCATCTGAAATaGACCACTAAGGACACCATG +
Preference number: 4 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAQFHLK*TTKDTM
Trigger: CATGGTGTCCTTAGTGGTCCATTTCAGATGGAACTG...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTAACAGGTATCACTCATaGCCATTCCAAGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGANRYHS*PFQVVS
Trigger: TGACACCACTTGGAATGGCCATGAGTGATACCTGTT...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCAGCATCTCATGGAGTaGGTGGGCTACAGCATATAT +
Preference number: 4 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNQHLME*VGYSIY
Trigger: ATATATGCTGTAGCCCACTCACTCCATGAGATGCTG...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGACCTGCGGGGATTTTCTaGGTCCTGGTCTGCAAGGCA +
Preference number: 4 (lower is better)
Translates to: WCFSELFIFIRISKPSPRPAGIF*VLVCKA
Trigger: TGCCTTGCAGACCAGGACTCAGAAAATCCCCGCAGG...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTCAAATTCCAGTTCCTTaGCAGCATTTTCTGACCATG +
Preference number: 4 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAQIPVP*QHFLTM
Trigger: CATGGTCAGAAAATGCTGGCAAGGAACTGGAATTTG...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTACAGAGAAAATCAAATaGTTGGTCTTGGGTGTCACG +
Preference number: 4 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGATEKIK*LVLGVT
Trigger: CGTGACACCCAAGACCAACCATTTGATTTTCTCTGT...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTATAGGACAAACTTTATaGGCGAGTTGTGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAIGQTL*ASCGLH
Trigger: ATGGAGACCACAACTCGCCCATAAAGTTTGTCCTAT...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTATCTCATGGAGTGAGTaGGCTACAGCATATATAGCA +
Preference number: 4 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAISWSE*ATAYIA
Trigger: TGCTATATATGCTGTAGCCCACTCACTCCATGAGAT...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAATCAGCATCAACAAATaGAGGGGAAGTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLISINK*RGSSQP
Trigger: TGGCTGGGAACTTCCCCTCCATTTGTTGATGCTGAT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATATCAGCATCAACAAATaGAGGGGAAGTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNISINK*RGSSQP
Trigger: TGGCTGGGAACTTCCCCTCCATTTGTTGATGCTGAT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
3UTR CAA 72 bp CAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTATaGCCATTCTTTTCACTACAGGCTAGCTGGACAAAG +
Preference number: 4 (lower is better)
Translates to: QCGAWITLLLNL*PFFSLQASWTK
Trigger: CTTTGTCCAGCTAGCCTGTAGTGAAAAGAATGGCAATAGATTCAGGAGCAATGTTATCCAAGCACCACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGACAGCATCTCATGGAGTaGGTGGGCTACAGCATATAT +
Preference number: 4 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGQHLME*VGYSIY
Trigger: ATATATGCTGTAGCCCACTCACTCCATGAGATGCTG...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTACTTGCCAGCATTTTCTaGCCATGTGTCTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLLASIF*PCVYLL
Trigger: CAACAAGTAGACACATGGTCAGAAAATGCTGGCAAG...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTTGCCAGCATTTTCTaGCCATGTGTCTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNLASIF*PCVYLL
Trigger: CAACAAGTAGACACATGGTCAGAAAATGCTGGCAAG...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTTTTGGTTATTGGCTTTaGCTATGGGAGTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAFGYWL*LWEFLC
Trigger: ACAGAGAAACTCCCATAGTCAAAGCCAATAACCAAA...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR TCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAGGCAGCCACAGTGAATaGAATGGCAAATGTGCTCTG +
Preference number: 4 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEGSHSE*NGKCAL
Trigger: CAGAGCACATTTGCCATTTCATTCACTGTGGCTGCC...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR GCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCATGTGTCTACTTGTTaGAGCAGCATCTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNHVSTC*SSISWS
Trigger: ACTCCATGAGATGCTGCTGCAACAAGTAGACACATG...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATATATCCTTTCCTTCCTaGGGGGATTTTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNISFPS*GDFLSP
Trigger: AGGACTCAGAAAATCCCCGCAGGAAGGAAAGGATAT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAGCAAATGTGCTCTGCTaGAGGACACAGATGACTATA +
Preference number: 4 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLANVLC*RTQMTI
Trigger: TATAGTCATCTGTGTCCTGCAGCAGAGCACATTTGC...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR GCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATATGAAATGGCAAATGTaGTCTGCTGCAGGACACAGA +
Preference number: 4 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNMKWQM*SAAGHR
Trigger: TCTGTGTCCTGCAGCAGAGCACATTTGCCATTTCAT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR GCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATATTTTGGGGCAAAGATaGAAAGAAGAAGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNILGQR*KEEALH
Trigger: GTGCAGGGCTTCTTCTTTGCATCTTTGCCCCAAAAT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTCAAATGGTTGGTCTTaGGTGTCACGTGCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNSNGWS*VSRACL
Trigger: TAGACAAGCACGTGACACCCAAGACCAACCATTTGA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTATCAAATGGTTGGTCTTaGGTGTCACGTGCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLSNGWS*VSRACL
Trigger: TAGACAAGCACGTGACACCCAAGACCAACCATTTGA...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAAACAGGTATCACTCATaGCCATTCCAAGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLNRYHS*PFQVVS
Trigger: TGACACCACTTGGAATGGCCATGAGTGATACCTGTT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTGAGTATGGTCTTCATTaGCATATTGATCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAEYGLH*HIDLLD
Trigger: GTCCAGAAGATCAATATGCCAATGAAGACCATACTC...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR CCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAATCAGCATCAACAAATaGAGGGGAAGTTCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGISINK*RGSSQP
Trigger: TGGCTGGGAACTTCCCCTCCATTTGTTGATGCTGAT...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
3UTR CAA 72 bp CCAATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATaGAACACAATGCTACTGGAAGATCCAGCAATACCT +
Preference number: 4 (lower is better)
Translates to: PILMSVWRFLRK*NTMLLEDPAIP
Trigger: AGGTATTGCTGGATCTTCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTGATCATGTCAAATTGTaGCACACTAACCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGADHVKL*HTNPNS
Trigger: AGAATTTGGGTTAGTGTGTCACAATTTGACATGATC...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGACAGCATCTCATGGAGTaGGTGGGCTACAGCATATAT +
Preference number: 4 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRQHLME*VGYSIY
Trigger: ATATATGCTGTAGCCCACTCACTCCATGAGATGCTG...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGACTTGCCAGCATTTTCTaGCCATGTGTCTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGLASIF*PCVYLL
Trigger: CAACAAGTAGACACATGGTCAGAAAATGCTGGCAAG...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp ACTGAACCTTTGTTGCAAACAATGATGATGTGGCCATGTACCATGTGTAGATCACATGTGTCTACTTGTTaGAGCAGCATCTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: TEPLLQTMMMWPCTMCRSHVSTC*SSISWS
Trigger: ACTCCATGAGATGCTGCTGCAACAAGTAGACACATG...TGATCTACACATGGTACATGGCCACATCATCATTGTTTGCAACAAAGGTTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCAAATTCCAGTTCCTTaGCAGCATTTTCTGACCATG +
Preference number: 4 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNQIPVP*QHFLTM
Trigger: CATGGTCAGAAAATGCTGGCAAGGAACTGGAATTTG...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTACAAATTCCAGTTCCTTaGCAGCATTTTCTGACCATG +
Preference number: 4 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLQIPVP*QHFLTM
Trigger: CATGGTCAGAAAATGCTGGCAAGGAACTGGAATTTG...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp ACTGAACCTTTGTTGCAAACAATGATGATGTGGCCATGTACCATGTGTAGATCAATATCCTTTCCTTCCTaGGGGGATTTTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: TEPLLQTMMMWPCTMCRSISFPS*GDFLSP
Trigger: AGGACTCAGAAAATCCCCGCAGGAAGGAAAGGATAT...TGATCTACACATGGTACATGGCCACATCATCATTGTTTGCAACAAAGGTTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTTTCTCCAAAAGCATCTaGGGTTACTCAAATGACAAA +
Preference number: 4 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAFSKSI*GYSNDK
Trigger: TTTGTCATTTGAGTAACCCCAGATGCTTTTGGAGAA...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGATCAAATGGTTGGTCTTaGGTGTCACGTGCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGSNGWS*VSRACL
Trigger: TAGACAAGCACGTGACACCCAAGACCAACCATTTGA...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATACAGAGAAAATCAAATaGTTGGTCTTGGGTGTCACG +
Preference number: 4 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNTEKIK*LVLGVT
Trigger: CGTGACACCCAAGACCAACCATTTGATTTTCTCTGT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAATAGGACAAACTTTATaGGCGAGTTGTGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLIGQTL*ASCGLH
Trigger: ATGGAGACCACAACTCGCCCATAAAGTTTGTCCTAT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATATAGGACAAACTTTATaGGCGAGTTGTGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNIGQTL*ASCGLH
Trigger: ATGGAGACCACAACTCGCCCATAAAGTTTGTCCTAT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAATCTCATGGAGTGAGTaGGCTACAGCATATATAGCA +
Preference number: 4 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLISWSE*ATAYIA
Trigger: TGCTATATATGCTGTAGCCCACTCACTCCATGAGAT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGACTTGCCAGCATTTTCTaGCCATGTGTCTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRLASIF*PCVYLL
Trigger: CAACAAGTAGACACATGGTCAGAAAATGCTGGCAAG...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATGGACATTTCACACACTaGTCCATATTTGTCATGTTC +
Preference number: 4 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNGHFTH*SIFVMF
Trigger: GAACATGACAAATATGGATCAGTGTGTGAAATGTCC...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR TCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTATTTGGTTATTGGCTTTaGCTATGGGAGTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLFGYWL*LWEFLC
Trigger: ACAGAGAAACTCCCATAGTCAAAGCCAATAACCAAA...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR TCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGACCACAGAGAATCAGCTaGATCATGGTGCATATAAGA +
Preference number: 4 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGPQRIS*IMVHIR
Trigger: TCTTATATGCACCATGATTCAGCTGATTCTCTGTGG...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR TCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAGTAGAAGGCAATCACTaGACCTTTGTTGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLVEGNH*TFVANN
Trigger: ATTGTTTGCAACAAAGGTTCAGTGATTGCCTTCTAC...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATGGACATTTCACACACTaGTCCATATCTGAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNGHFTH*SISEKK
Trigger: CTTCTTTTCAGATATGGATCAGTGTGTGAAATGTCC...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAATATCCTTTCCTTCCTaGGGGGATTTTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRISFPS*GDFLSP
Trigger: AGGACTCAGAAAATCCCCGCAGGAAGGAAAGGATAT...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAATATCCTTTCCTTCCTaGGGGGATTTTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEISFPS*GDFLSP
Trigger: AGGACTCAGAAAATCCCCGCAGGAAGGAAAGGATAT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGATCAAATGGTTGGTCTTaGGTGTCACGTGCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRSNGWS*VSRACL
Trigger: TAGACAAGCACGTGACACCCAAGACCAACCATTTGA...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAATCAAATGGTTGGTCTTaGGTGTCACGTGCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQESNGWS*VSRACL
Trigger: TAGACAAGCACGTGACACCCAAGACCAACCATTTGA...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAACAGTTCCATCTGAAATaGACCACTAAGGACACCATG +
Preference number: 4 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEQFHLK*TTKDTM
Trigger: CATGGTGTCCTTAGTGGTCCATTTCAGATGGAACTG...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAATAGGACAAACTTTATaGGCGAGTTGTGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGIGQTL*ASCGLH
Trigger: ATGGAGACCACAACTCGCCCATAAAGTTTGTCCTAT...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAAACAGGTATCACTCATaGCCATTCCAAGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRNRYHS*PFQVVS
Trigger: TGACACCACTTGGAATGGCCATGAGTGATACCTGTT...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAGAGTATGGTCTTCATTaGCATATTGATCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLEYGLH*HIDLLD
Trigger: GTCCAGAAGATCAATATGCCAATGAAGACCATACTC...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTACAAACAATGATGATGTaGCCATGTACCATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLQTMMM*PCTMCR
Trigger: TCTACACATGGTACATGGCCACATCATCATTGTTTG...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATGATCATGTCAAATTGTaGCACACTAACCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNDHVKL*HTNPNS
Trigger: AGAATTTGGGTTAGTGTGTCACAATTTGACATGATC...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAGATCATGTCAAATTGTaGCACACTAACCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLDHVKL*HTNPNS
Trigger: AGAATTTGGGTTAGTGTGTCACAATTTGACATGATC...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACCAGCATCTCATGGAGTaGGTGGGCTACAGCATATAT +
Preference number: 4 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHQHLME*VGYSIY
Trigger: ATATATGCTGTAGCCCACTCACTCCATGAGATGCTG...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGACAGCATCTCATGGAGTaGGTGGGCTACAGCATATAT +
Preference number: 4 (lower is better)
Translates to: WCFSELFIFIRISKPSPRQHLME*VGYSIY
Trigger: ATATATGCTGTAGCCCACTCACTCCATGAGATGCTG...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAGGACATTTCACACACTaGTCCATATTTGTCATGTTC +
Preference number: 4 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGGHFTH*SIFVMF
Trigger: GAACATGACAAATATGGATCAGTGTGTGAAATGTCC...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR TCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTCTTCATTGGCATATTaGTCTTCTGGACATTTCACA +
Preference number: 4 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNSSLAY*SSGHFT
Trigger: TGTGAAATGTCCAGAAGATCAATATGCCAATGAAGA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR TCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTATCTTCATTGGCATATTaGTCTTCTGGACATTTCACA +
Preference number: 4 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLSSLAY*SSGHFT
Trigger: TGTGAAATGTCCAGAAGATCAATATGCCAATGAAGA...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR TCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAGTAGAAGGCAATCACTaGACCTTTGTTGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGVEGNH*TFVANN
Trigger: ATTGTTTGCAACAAAGGTTCAGTGATTGCCTTCTAC...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR TCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAGGACATTTCACACACTaGTCCATATCTGAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGGHFTH*SISEKK
Trigger: CTTCTTTTCAGATATGGATCAGTGTGTGAAATGTCC...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGACAAATTCCAGTTCCTTaGCAGCATTTTCTGACCATG +
Preference number: 4 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRQIPVP*QHFLTM
Trigger: CATGGTCAGAAAATGCTGGCAAGGAACTGGAATTTG...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTTCTCCAAAAGCATCTaGGGTTACTCAAATGACAAA +
Preference number: 4 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNFSKSI*GYSNDK
Trigger: TTTGTCATTTGAGTAACCCCAGATGCTTTTGGAGAA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAACAGAGAAAATCAAATaGTTGGTCTTGGGTGTCACG +
Preference number: 4 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRTEKIK*LVLGVT
Trigger: CGTGACACCCAAGACCAACCATTTGATTTTCTCTGT...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAACAGAGAAAATCAAATaGTTGGTCTTGGGTGTCACG +
Preference number: 4 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQETEKIK*LVLGVT
Trigger: CGTGACACCCAAGACCAACCATTTGATTTTCTCTGT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTACTACCAGAGAAATGTTaGGTAAAATATGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLLPEKC*VKYGCS
Trigger: AGAACAGCCATATTTTACCCAACATTTCTCTGGTAG...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAATAGGACAAACTTTATaGGCGAGTTGTGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEIGQTL*ASCGLH
Trigger: ATGGAGACCACAACTCGCCCATAAAGTTTGTCCTAT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAATCTCATGGAGTGAGTaGGCTACAGCATATATAGCA +
Preference number: 4 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRISWSE*ATAYIA
Trigger: TGCTATATATGCTGTAGCCCACTCACTCCATGAGAT...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAATCTCATGGAGTGAGTaGGCTACAGCATATATAGCA +
Preference number: 4 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEISWSE*ATAYIA
Trigger: TGCTATATATGCTGTAGCCCACTCACTCCATGAGAT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAGAGTATGGTCTTCATTaGCATATTGATCTTCTGGAC +
Preference number: 4 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGEYGLH*HIDLLD
Trigger: GTCCAGAAGATCAATATGCCAATGAAGACCATACTC...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR CCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGACAAACAATGATGATGTaGCCATGTACCATGTGTAGA +
Preference number: 4 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGQTMMM*PCTMCR
Trigger: TCTACACATGGTACATGGCCACATCATCATTGTTTG...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR TCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAGGACATTTCACACACTaGTCCATATTTGTCATGTTC +
Preference number: 4 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRGHFTH*SIFVMF
Trigger: GAACATGACAAATATGGATCAGTGTGTGAAATGTCC...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR TCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGATCTTCATTGGCATATTaGTCTTCTGGACATTTCACA +
Preference number: 4 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGSSLAY*SSGHFT
Trigger: TGTGAAATGTCCAGAAGATCAATATGCCAATGAAGA...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR TCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAATTTGGTTATTGGCTTTaGCTATGGGAGTTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEFGYWL*LWEFLC
Trigger: ACAGAGAAACTCCCATAGTCAAAGCCAATAACCAAA...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR TCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAGTAGAAGGCAATCACTaGACCTTTGTTGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRVEGNH*TFVANN
Trigger: ATTGTTTGCAACAAAGGTTCAGTGATTGCCTTCTAC...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR TCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAGGACATTTCACACACTaGTCCATATCTGAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRGHFTH*SISEKK
Trigger: CTTCTTTTCAGATATGGATCAGTGTGTGAAATGTCC...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACCATGTGTCTACTTGTTaGAGCAGCATCTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHHVSTC*SSISWS
Trigger: ACTCCATGAGATGCTGCTGCAACAAGTAGACACATG...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGACATGTGTCTACTTGTTaGAGCAGCATCTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: WCFSELFIFIRISKPSPRHVSTC*SSISWS
Trigger: ACTCCATGAGATGCTGCTGCAACAAGTAGACACATG...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACATATCCTTTCCTTCCTaGGGGGATTTTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHISFPS*GDFLSP
Trigger: AGGACTCAGAAAATCCCCGCAGGAAGGAAAGGATAT...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGAATATCCTTTCCTTCCTaGGGGGATTTTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: WCFSELFIFIRISKPSPRISFPS*GDFLSP
Trigger: AGGACTCAGAAAATCCCCGCAGGAAGGAAAGGATAT...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACATGAAATGGCAAATGTaGTCTGCTGCAGGACACAGA +
Preference number: 4 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHMKWQM*SAAGHR
Trigger: TCTGTGTCCTGCAGCAGAGCACATTTGCCATTTCAT...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR CCA 90 bp ACTGAACCTTTGTTGCAAACAATGATGATGTGGCCATGTACCATGTGTAGATCACTACCAGAGAAATGTTaGGTAAAATATGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TEPLLQTMMMWPCTMCRSLPEKC*VKYGCS
Trigger: AGAACAGCCATATTTTACCCAACATTTCTCTGGTAG...TGATCTACACATGGTACATGGCCACATCATCATTGTTTGCAACAAAGGTTCAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGACTACCAGAGAAATGTTaGGTAAAATATGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGLPEKC*VKYGCS
Trigger: AGAACAGCCATATTTTACCCAACATTTCTCTGGTAG...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACCAGTTCCATCTGAAATaGACCACTAAGGACACCATG +
Preference number: 4 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHQFHLK*TTKDTM
Trigger: CATGGTGTCCTTAGTGGTCCATTTCAGATGGAACTG...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGACAGTTCCATCTGAAATaGACCACTAAGGACACCATG +
Preference number: 4 (lower is better)
Translates to: WCFSELFIFIRISKPSPRQFHLK*TTKDTM
Trigger: CATGGTGTCCTTAGTGGTCCATTTCAGATGGAACTG...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGAAACAGGTATCACTCATaGCCATTCCAAGTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: WCFSELFIFIRISKPSPRNRYHS*PFQVVS
Trigger: TGACACCACTTGGAATGGCCATGAGTGATACCTGTT...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTCCTGTTTCAAATTCTaGTTCATGTTAACTAGGTCT +
Preference number: 4 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNSCFKF*FMLTRS
Trigger: AGACCTAGTTAACATGAACCAGAATTTGAAACAGGA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233115.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAGATCATGTCAAATTGTaGCACACTAACCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRDHVKL*HTNPNS
Trigger: AGAATTTGGGTTAGTGTGTCACAATTTGACATGATC...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR GCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACCAAATTCCAGTTCCTTaGCAGCATTTTCTGACCATG +
Preference number: 4 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHQIPVP*QHFLTM
Trigger: CATGGTCAGAAAATGCTGGCAAGGAACTGGAATTTG...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAATTCTCCAAAAGCATCTaGGGTTACTCAAATGACAAA +
Preference number: 4 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEFSKSI*GYSNDK
Trigger: TTTGTCATTTGAGTAACCCCAGATGCTTTTGGAGAA...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGATTCTCCAAAAGCATCTaGGGTTACTCAAATGACAAA +
Preference number: 4 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRFSKSI*GYSNDK
Trigger: TTTGTCATTTGAGTAACCCCAGATGCTTTTGGAGAA...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACACAGAGAAAATCAAATaGTTGGTCTTGGGTGTCACG +
Preference number: 4 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHTEKIK*LVLGVT
Trigger: CGTGACACCCAAGACCAACCATTTGATTTTCTCTGT...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGACTACCAGAGAAATGTTaGGTAAAATATGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRLPEKC*VKYGCS
Trigger: AGAACAGCCATATTTTACCCAACATTTCTCTGGTAG...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAACTACCAGAGAAATGTTaGGTAAAATATGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQELPEKC*VKYGCS
Trigger: AGAACAGCCATATTTTACCCAACATTTCTCTGGTAG...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACATAGGACAAACTTTATaGGCGAGTTGTGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHIGQTL*ASCGLH
Trigger: ATGGAGACCACAACTCGCCCATAAAGTTTGTCCTAT...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGAATAGGACAAACTTTATaGGCGAGTTGTGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: WCFSELFIFIRISKPSPRIGQTL*ASCGLH
Trigger: ATGGAGACCACAACTCGCCCATAAAGTTTGTCCTAT...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACATCTCATGGAGTGAGTaGGCTACAGCATATATAGCA +
Preference number: 4 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHISWSE*ATAYIA
Trigger: TGCTATATATGCTGTAGCCCACTCACTCCATGAGAT...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGAATCTCATGGAGTGAGTaGGCTACAGCATATATAGCA +
Preference number: 4 (lower is better)
Translates to: WCFSELFIFIRISKPSPRISWSE*ATAYIA
Trigger: TGCTATATATGCTGTAGCCCACTCACTCCATGAGAT...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGATCCTGTTTCAAATTCTaGTTCATGTTAACTAGGTCT +
Preference number: 4 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGSCFKF*FMLTRS
Trigger: AGACCTAGTTAACATGAACCAGAATTTGAAACAGGA...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233115.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR CAA 72 bp GAAGGTCCAACTGGTAATAAGAACACATGCTGCACTTaGTTCATAGCAGCCAAATTTATCATAATTAGAAGC +
Preference number: 4 (lower is better)
Translates to: EGPTGNKNTCCT*FIAAKFIIIRS
Trigger: GCTTCTAATTATGATAAATTTGGCTGCTATGAACAAAGTGCAGCATGTGTTCTTATTACCAGTTGGACCTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACGGACATTTCACACACTaGTCCATATTTGTCATGTTC +
Preference number: 4 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHGHFTH*SIFVMF
Trigger: GAACATGACAAATATGGATCAGTGTGTGAAATGTCC...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR TCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGAGTAGAAGGCAATCACTaGACCTTTGTTGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: WCFSELFIFIRISKPSPRVEGNH*TFVANN
Trigger: ATTGTTTGCAACAAAGGTTCAGTGATTGCCTTCTAC...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR TCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGAGGACATTTCACACACTaGTCCATATCTGAAAAGAAG +
Preference number: 4 (lower is better)
Translates to: WCFSELFIFIRISKPSPRGHFTH*SISEKK
Trigger: CTTCTTTTCAGATATGGATCAGTGTGTGAAATGTCC...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
CDS-3UTR TCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGAGATCATGTCAAATTGTaGCACACTAACCCAAATTCT +
Preference number: 4 (lower is better)
Translates to: WCFSELFIFIRISKPSPRDHVKL*HTNPNS
Trigger: AGAATTTGGGTTAGTGTGTCACAATTTGACATGATC...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGATTCTCCAAAAGCATCTaGGGTTACTCAAATGACAAA +
Preference number: 4 (lower is better)
Translates to: WCFSELFIFIRISKPSPRFSKSI*GYSNDK
Trigger: TTTGTCATTTGAGTAACCCCAGATGCTTTTGGAGAA...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGACTACCAGAGAAATGTTaGGTAAAATATGGCTGTTCT +
Preference number: 4 (lower is better)
Translates to: WCFSELFIFIRISKPSPRLPEKC*VKYGCS
Trigger: AGAACAGCCATATTTTACCCAACATTTCTCTGGTAG...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
3UTR CAA 72 bp CATAGGAGAAACATTCCTAAACAGAACAGCAATGTTTaGTGCTGTAAGATCAAGAATCAACAAATGCAATCT +
Preference number: 4 (lower is better)
Translates to: HRRNIPKQNSNV*CCKIKNQQMQS
Trigger: AGATTGCATTTGTTGATTCTTGATCTTACAGCACAAAACATTGCTGTTCTGTTTAGGAATGTTTCTCCTATG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CCA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGATCCTGTTTCAAATTCTaGTTCATGTTAACTAGGTCT +
Preference number: 4 (lower is better)
Translates to: WCFSELFIFIRISKPSPRSCFKF*FMLTRS
Trigger: AGACCTAGTTAACATGAACCAGAATTTGAAACAGGA...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233115.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTCCTGGGACAGTGACCTaGAAGGCCAGTACTACAGTA +
Preference number: 5 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAPGTVT*KASTTV
Trigger: TACTGTAGTACTGGCCTTCAAGGTCACTGTCCCAGG...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR CAA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTCCATGTGTCTACTTGTaGCAGCAGCATCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAPCVYL*QQHLME
Trigger: CTCCATGAGATGCTGCTGCAACAAGTAGACACATGG...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCCATGTGTCTACTTGTaGCAGCAGCATCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNPCVYL*QQHLME
Trigger: CTCCATGAGATGCTGCTGCAACAAGTAGACACATGG...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTACCATGTGTCTACTTGTaGCAGCAGCATCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLPCVYL*QQHLME
Trigger: CTCCATGAGATGCTGCTGCAACAAGTAGACACATGG...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGACCATGTGTCTACTTGTaGCAGCAGCATCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGPCVYL*QQHLME
Trigger: CTCCATGAGATGCTGCTGCAACAAGTAGACACATGG...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTTCAAATTCCAGTTCCTaGCCAGCATTTTCTGACCAT +
Preference number: 5 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGASNSSS*PAFSDH
Trigger: ATGGTCAGAAAATGCTGGCAAGGAACTGGAATTTGA...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAACCTGGGACAGTGACCTaGAAGGCCAGTACTACAGTA +
Preference number: 5 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEPGTVT*KASTTV
Trigger: TACTGTAGTACTGGCCTTCAAGGTCACTGTCCCAGG...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR CAA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAGAAGAAGCCCTGCACTaGAGGCCAAGATACAGAAAA +
Preference number: 5 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLEEALH*RPRYRK
Trigger: TTTTCTGTATCTTGGCCTCAAGTGCAGGGCTTCTTC...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS GCA 90 bp TACATATTGAGGGTAGAATCTTCCAAGAGTCAAATTCCAGTTCCTTaGCAGCATTTTCTGACCATGTGTCTACTTGTTGCAGCAGCATCT +
Preference number: 5 (lower is better)
Translates to: YILRVESSKSQIPVP*QHFLTMCLLVAAAS
Trigger: AGATGCTGCTGCAACAAGTAGACACATGGTCAGAAAATGCTGGCAAGGAACTGGAATTTGACTCTTGGAAGATTCTACCCTCAATATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233315.2
CDS-3UTR CAA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTATAGCTGTTGATGACTaGGAAGATGACCTGAAAATT +
Preference number: 5 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAIAVDD*EDDLKI
Trigger: AATTTTCAGGTCATCTTCCAAGTCATCAACAGCTAT...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233115.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTGACATAACTGAGAGTTaGGTTATTGGCTTTGACTAT +
Preference number: 5 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGADITES*VIGFDY
Trigger: ATAGTCAAAGCCAATAACCAAACTCTCAGTTATGTC...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR CAA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAGAAGAAGCCCTGCACTaGAGGCCAAGATACAGAAAA +
Preference number: 5 (lower is better)
Translates to: NKRMSGEITMPDIRLYYREEALH*RPRYRK
Trigger: TTTTCTGTATCTTGGCCTCAAGTGCAGGGCTTCTTC...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR CAA 90 bp ATGGCCATGATCCATCCTGATGTACATGCTTATTACCTGGATCAGTGTGGTGCTGTAGAGATGTATCTTTaGGAGATATCTCAGGAATTC +
Preference number: 5 (lower is better)
Translates to: MAMIHPDVHAYYLDQCGAVEMYL*EISQEF
Trigger: GAATTCCTGAGATATCTCCAAAAGATACATCTCTAC...AGCACCACACTGATCCAGGTAATAAGCATGTACATCAGGATGGATCATGGCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp CATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATCTAACTACCAGAGAAATGTaGGGTAAAATATGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: HAYYLDQCGAWITLLLNLTTREM*GKIWLF
Trigger: GAACAGCCATATTTTACCCAACATTTCTCTGGTAGT...TAGATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATACTACCAGAGAAATGTaGGGTAAAATATGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNTTREM*GKIWLF
Trigger: GAACAGCCATATTTTACCCAACATTTCTCTGGTAGT...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACCCATGTGTCTACTTGTaGCAGCAGCATCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHPCVYL*QQHLME
Trigger: CTCCATGAGATGCTGCTGCAACAAGTAGACACATGG...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGATCAAATTCCAGTTCCTaGCCAGCATTTTCTGACCAT +
Preference number: 5 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGSNSSS*PAFSDH
Trigger: ATGGTCAGAAAATGCTGGCAAGGAACTGGAATTTGA...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp GTACATGCTTATTACCTGGATCAGTGTGGTGCTTGGATAACATTGCTCCTGAATTCTCCTAGTTTGTCTTaGGTGTCTTTTATTCTCCAA +
Preference number: 5 (lower is better)
Translates to: VHAYYLDQCGAWITLLLNSPSLS*VSFILQ
Trigger: TTGGAGAATAAAAGACACCAAAGACAAACTAGGAGA...ATTCAGGAGCAATGTTATCCAAGCACCACACTGATCCAGGTAATAAGCATGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp ACTGAACCTTTGTTGCAAACAATGATGATGTGGCCATGTACCATGTGTAGATCAACTACCAGAGAAATGTaGGGTAAAATATGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: TEPLLQTMMMWPCTMCRSTTREM*GKIWLF
Trigger: GAACAGCCATATTTTACCCAACATTTCTCTGGTAGT...TGATCTACACATGGTACATGGCCACATCATCATTGTTTGCAACAAAGGTTCAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAACTACCAGAGAAATGTaGGGTAAAATATGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGTTREM*GKIWLF
Trigger: GAACAGCCATATTTTACCCAACATTTCTCTGGTAGT...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGATCAAATTCCAGTTCCTaGCCAGCATTTTCTGACCAT +
Preference number: 5 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRSNSSS*PAFSDH
Trigger: ATGGTCAGAAAATGCTGGCAAGGAACTGGAATTTGA...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGAGAAGAAGCCCTGCACTaGAGGCCAAGATACAGAAAA +
Preference number: 5 (lower is better)
Translates to: WCFSELFIFIRISKPSPREEALH*RPRYRK
Trigger: TTTTCTGTATCTTGGCCTCAAGTGCAGGGCTTCTTC...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR CAA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGATCTCCTAGTTTGTCTTaGGTGTCTTTTATTCTCCAA +
Preference number: 5 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGSPSLS*VSFILQ
Trigger: TTGGAGAATAAAAGACACCAAAGACAAACTAGGAGA...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAACTACCAGAGAAATGTaGGGTAAAATATGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQETTREM*GKIWLF
Trigger: GAACAGCCATATTTTACCCAACATTTCTCTGGTAGT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGAACTACCAGAGAAATGTaGGGTAAAATATGGCTGTTC +
Preference number: 5 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRTTREM*GKIWLF
Trigger: GAACAGCCATATTTTACCCAACATTTCTCTGGTAGT...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAATAGCTGTTGATGACTaGGAAGATGACCTGAAAATT +
Preference number: 5 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGIAVDD*EDDLKI
Trigger: AATTTTCAGGTCATCTTCCAAGTCATCAACAGCTAT...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233115.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp AATCTTGATGTCAGTCTGGAGGTTCCTCAGAAAATTGAACACAATGCTACTGGAGACATAACTGAGAGTTaGGTTATTGGCTTTGACTAT +
Preference number: 5 (lower is better)
Translates to: NLDVSLEVPQKIEHNATGDITES*VIGFDY
Trigger: ATAGTCAAAGCCAATAACCAAACTCTCAGTTATGTC...TCCAGTAGCATTGTGTTCAATTTTCTGAGGAACCTCCAGACTGACATCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS-3UTR CAA 90 bp AATAAAAGAATGTCTGGTGAAATCACCATGCCTGACATTAGGCTGTACTACAGATCTCCTAGTTTGTCTTaGGTGTCTTTTATTCTCCAA +
Preference number: 5 (lower is better)
Translates to: NKRMSGEITMPDIRLYYRSPSLS*VSFILQ
Trigger: TTGGAGAATAAAAGACACCAAAGACAAACTAGGAGA...TCTGTAGTACAGCCTAATGTCAGGCATGGTGATTTCACCAGACATTCTTTTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGATCAAATTCCAGTTCCTaGCCAGCATTTTCTGACCAT +
Preference number: 5 (lower is better)
Translates to: WCFSELFIFIRISKPSPRSNSSS*PAFSDH
Trigger: ATGGTCAGAAAATGCTGGCAAGGAACTGGAATTTGA...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp GCCTTTGACTACATCCAACACCCATACATGTTAAATGTTTGGATTGATCAGGAAATAGCTGTTGATGACTaGGAAGATGACCTGAAAATT +
Preference number: 5 (lower is better)
Translates to: AFDYIQHPYMLNVWIDQEIAVDD*EDDLKI
Trigger: AATTTTCAGGTCATCTTCCAAGTCATCAACAGCTAT...TTCCTGATCAATCCAAACATTTAACATGTATGGGTGTTGGATGTAGTCAAAGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233115.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS TCA 90 bp ATCATGTCAAATTGTGACACACTAACCCAAATTCTAAAAATGCCTTaGGATTTCCACAAAAATAGGACAAACTTTATGGGCGAGTTGTGG +
Preference number: 5 (lower is better)
Translates to: IMSNCDTLTQILKMP*DFHKNRTNFMGELW
Trigger: CCACAACTCGCCCATAAAGTTTGTCCTATTTTTGTGGAAATCTCAAGGCATTTTTAGAATTTGGGTTAGTGTGTCACAATTTGACATGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGAAATAGCCACAATTTTTaGGAGACAGAGAGTATGGTC +
Preference number: 5 (lower is better)
Translates to: WCFSELFIFIRISKPSPRNSHNF*ETESMV
Trigger: GACCATACTCTCTGTCTCCAAAAAATTGTGGCTATT...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS TCA 90 bp ATTGGCATATTGATCTTCTGGACATTTCACACACTGATCCATATCTaGAAAGAAGACAAATATAAAGGCACAAGAAACTTGTCATGTTCG +
Preference number: 5 (lower is better)
Translates to: IGILIFWTFHTLIHI*KEDKYKGTRNLSCS
Trigger: CGAACATGACAAGTTTCTTGTGCCTTTATATTTGTCTTCTTTTCAGATATGGATCAGTGTGTGAAATGTCCAGAAGATCAATATGCCAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233115.2
ENSMUST00000233748.2
CDS GCA 90 bp AAATTCTGGTTCATGTTAACTAGGTCTCCAGCAGGATTTACAAATTaGATTGTCTTCAGAATAGAAAACATCTTCCAAGAGTCAAATTCC +
Preference number: 5 (lower is better)
Translates to: KFWFMLTRSPAGFTN*IVFRIENIFQESNS
Trigger: GGAATTTGACTCTTGGAAGATGTTTTCTATTCTGAAGACAATGCAATTTGTAAATCCTGCTGGAGACCTAGTTAACATGAACCAGAATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233115.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACTCTCCTAGTTTGTCTTaGGTGTCTTTTATTCTCCAA +
Preference number: 5 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHSPSLS*VSFILQ
Trigger: TTGGAGAATAAAAGACACCAAAGACAAACTAGGAGA...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGATCTCCTAGTTTGTCTTaGGTGTCTTTTATTCTCCAA +
Preference number: 5 (lower is better)
Translates to: WCFSELFIFIRISKPSPRSPSLS*VSFILQ
Trigger: TTGGAGAATAAAAGACACCAAAGACAAACTAGGAGA...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACATAGCTGTTGATGACTaGGAAGATGACCTGAAAATT +
Preference number: 5 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHIAVDD*EDDLKI
Trigger: AATTTTCAGGTCATCTTCCAAGTCATCAACAGCTAT...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233115.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp TGGTGCTTTAGTGAGTTATTCATATTTATTCGTATAAGTAAACCCTCACCCAGAGTAGAGATGTATCTTTaGGAGATATCTCAGGAATTC +
Preference number: 5 (lower is better)
Translates to: WCFSELFIFIRISKPSPRVEMYL*EISQEF
Trigger: GAATTCCTGAGATATCTCCAAAAGATACATCTCTAC...TCTGGGTGAGGGTTTACTTATACGAATAAATATGAATAACTCACTAAAGCACCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS-3UTR CAA 90 bp ATTTTGAAACTTTTGAGTGTCCTGAATGTTGTGTCATATACTCCAAATTCCCACGTAGAGATGTATCTTTaGGAGATATCTCAGGAATTC +
Preference number: 5 (lower is better)
Translates to: ILKLLSVLNVVSYTPNSHVEMYL*EISQEF
Trigger: GAATTCCTGAGATATCTCCAAAAGATACATCTCTAC...GTGGGAATTTGGAGTATATGACACAACATTCAGGACACTCAAAAGTTTCAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000232897.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS TCA 72 bp AACAGCATATATCCTTTCCTTCCTGCGGGGATTTTCTaGGTCCTGGTCTGCAAGGCATACTACATATTGAGG +
Preference number: 6 (lower is better)
Translates to: NSIYPFLPAGIF*VLVCKAYYILR
Trigger: CCTCAATATGTAGTATGCCTTGCAGACCAGGACTCAGAAAATCCCCGCAGGAAGGAAAGGATATATGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS CAA 90 bp GTCTTCAGAATAGAAAACATCTTCCAAGAGTCAAATTCCAGTTCCTaGCCAGCATTTTCTGACCATGTGTCTACTTGTTGCAGCAGCATC +
Preference number: 6 (lower is better)
Translates to: VFRIENIFQESNSSS*PAFSDHVSTCCSSI
Trigger: GATGCTGCTGCAACAAGTAGACACATGGTCAGAAAATGCTGGCAAGGAACTGGAATTTGACTCTTGGAAGATGTTTTCTATTCTGAAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233115.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS TCA 72 bp TGGTCTTGGGTGTCACGTGCTTGTCTAGATTCCAACTaGAATAATCATTCCTTATATAACCATGCTTTGCAG +
Preference number: 6 (lower is better)
Translates to: WSWVSRACLDSN*NNHSLYNHALQ
Trigger: CTGCAAAGCATGGTTATATAAGGAATGATTATTTCAGTTGGAATCTAGACAAGCACGTGACACCCAAGACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2
CDS CAA 72 bp CTAAGGACACCATGGCTAGTGGTAGAGATGTATCTTTaGGAGATATCTGGTAAAGATGAGGAAATTGTTCAT +
Preference number: 6 (lower is better)
Translates to: LRTPWLVVEMYL*EISGKDEEIVH
Trigger: ATGAACAATTTCCTCATCTTTACCAGATATCTCCAAAAGATACATCTCTACCACTAGCCATGGTGTCCTTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
CDS CAA 90 bp AATGGACCACTAAGGACACCATGGCTAGTGGTAGAGATGTATCTTTaGGAGATATCTGGTAAAGATGAGGAAATTGTTCATTATCACTTA +
Preference number: 6 (lower is better)
Translates to: NGPLRTPWLVVEMYL*EISGKDEEIVHYHL
Trigger: TAAGTGATAATGAACAATTTCCTCATCTTTACCAGATATCTCCAAAAGATACATCTCTACCACTAGCCATGGTGTCCTTAGTGGTCCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
CDS CCA 72 bp ACAGAGAGTATGGTCTTCATTGGCATATTGATCTTCTaGACATTTCACACACTGATCCATATTTGTCATGTT +
Preference number: 6 (lower is better)
Translates to: TESMVFIGILIF*TFHTLIHICHV
Trigger: AACATGACAAATATGGATCAGTGTGTGAAATGTCCAGAAGATCAATATGCCAATGAAGACCATACTCTCTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS CAA 72 bp TTTTTGGAGACAGAGAGTATGGTCTTCATTGGCATATaGATCTTCTGGACATTTCACACACTGATCCATATT +
Preference number: 6 (lower is better)
Translates to: FLETESMVFIGI*IFWTFHTLIHI
Trigger: AATATGGATCAGTGTGTGAAATGTCCAGAAGATCAATATGCCAATGAAGACCATACTCTCTGTCTCCAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077478.8
ENSMUST00000233079.2
ENSMUST00000233315.2
ENSMUST00000233729.2
CDS CCA 72 bp TTTGGTGGGACAATTCTTCAGTTTCTTACAATTAGATaGTGGCAAAGAAGAACATCTAAAATATGTCCACCA +
Preference number: 6 (lower is better)
Translates to: FGGTILQFLTIR*WQRRTSKICPP
Trigger: TGGTGGACATATTTTAGATGTTCTTCTTTGCCACCATCTAATTGTAAGAAACTGAAGAATTGTCCCACCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000077478.8
ENSMUST00000232897.2
ENSMUST00000232965.2
ENSMUST00000233079.2
ENSMUST00000233115.2
ENSMUST00000233315.2
ENSMUST00000233729.2
ENSMUST00000233748.2