Pregenerated sensors for VMN2R72 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051877Ensembl transcript IDs: ENSMUST00000063425.9, ENSMUST00000233415.2, ENSMUST00000233546.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AATGTAGCATTTAGGGGCAAAAATGCAAAGAAGAAGCCCTGCACTTaGTGCCAAGATACAGAACACTTCCACAGCAACCATAGTCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: NVAFRGKNAKKKPCT*CQDTEHFHSNHSLA Trigger: GGCAAGACTATGGTTGCTGTGGAAGTGTTCTGTATCTTGGCATCAAGTGCAGGGCTTCTTCTTTGCATTTTTGCCCCTAAATGCTACATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR TCA 90 bp | CTGAATCCTGGTTTGCAAGGGATATTACATGCTGAGGGAAGAATCTaGTCCACATCTGTAGCCCACTCCATCATTTCTTTAGACATATAT | + |
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Preference number: 1 (lower is better) Translates to: LNPGLQGILHAEGRI*STSVAHSIISLDIY Trigger: ATATATGTCTAAAGAAATGATGGAGTGGGCTACAGATGTGGATCAGATTCTTCCCTCAGCATGTAATATCCCTTGCAAACCAGGATTCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
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| 3UTR TCA 90 bp | GAACAGCATCCTATTATAAAAATAGAACATCACAACACTTCTAAGTaGTTGGCCCTTTGTTTGTCTGCCACCTATGCCTTGAAATTTTCC | + |
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Preference number: 1 (lower is better) Translates to: EQHPIIKIEHHNTSK*LALCLSATYALKFS Trigger: GGAAAATTTCAAGGCATAGGTGGCAGACAAACAAAGGGCCAATCACTTAGAAGTGTTGTGATGTTCTATTTTTATAATAGGATGCTGTTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR TCA 90 bp | CAGACCATGTGTTTTTGCATTTCTCCTCTCAATTTAGAAAGGAATTaGATTCCATGGTCATCATTTGTAATCATCGCTCCTATCCAGTTC | + |
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Preference number: 1 (lower is better) Translates to: QTMCFCISPLNLERN*IPWSSFVIIAPIQF Trigger: GAACTGGATAGGAGCGATGATTACAAATGATGACCATGGAATTCAATTCCTTTCTAAATTGAGAGGAGAAATGCAAAAACACATGGTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
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| 3UTR TCA 90 bp | AAATTCATGAAAAGTAATATTGGGAATTCTGCTTCAAATTATAGATaGCATGTGATGTGGAGAGCCGTGAGCAATCACCATTACAAGATG | + |
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Preference number: 1 (lower is better) Translates to: KFMKSNIGNSASNYR*HVMWRAVSNHHYKM Trigger: CATCTTGTAATGGTGATTGCTCACGGCTCTCCACATCACATGTCATCTATAATTTGAAGCAGAATTCCCAATATTACTTTTCATGAATTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR TCA 90 bp | AGAAAATGTCATACTCTGTATCCTGTTTCAAATTCTGGTTCATGTTaGCTAGGTCTCCAGCAGGATTTACAAATTGTAATGTCTTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: RKCHTLYPVSNSGSC*LGLQQDLQIVMSSE Trigger: TTCTGAAGACATTACAATTTGTAAATCCTGCTGGAGACCTAGTCAACATGAACCAGAATTTGAAACAGGATACAGAGTATGACATTTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
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| 3UTR-3UTR TCA 90 bp | AAACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACGCTGAGGGAAGAATCTaGTCCACATCTGTAGCCCAC | + |
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Preference number: 2 (lower is better) Translates to: KQVMCAGVRVNLCQVTAHAEGRI*STSVAH Trigger: GTGGGCTACAGATGTGGATCAGATTCTTCCCTCAGC...GTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
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| 3UTR-3UTR GCA 90 bp | ACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACCCGTAAGAGTAAATTTGTaGCAAGTCACTGCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: TSNVCRCKSKFVPSHCPPVRVNL*QVTAHP Trigger: GGGGTGGGCAGTGACTTGGCACAAATTTACTCTTAC...GGGTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGAGTATGGTCTTCATTTGCATATTGATCTTCTCGACACTTCACACACTGCGACACTTCACACACTaGTCCATGTACATGGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: EESMVFICILIFSTLHTLRHFTH*SMYMEG Trigger: CCCCTCCATGTACATGGATCAGTGTGTGAAGTGTCG...CAGTGTGTGAAGTGTCGAGAAGATCAATATGCAAATGAAGACCATACTCTCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233415.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGGTGGGACAATTCTTCAGCGTTTTACAATTAGATGGTGGCAAAGAACATCTATACTTGGGTGCCCCTaGCACAAGCAGCCACCTCAT | + |
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Preference number: 2 (lower is better) Translates to: FGGTILQRFTIRWWQRTSILGCP*HKQPPH Trigger: ATGAGGTGGCTGCTTGTGTCAGGGGCACCCAAGTAT...AGATGTTCTTTGCCACCATCTAATTGTAAAACGCTGAAGAATTGTCCCACCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
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| 3UTR-3UTR CCA 90 bp | ACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACCCATCAGCATCAACATATaGAGGAGAAGTTCCCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: TSNVCRCKSKFVPSHCPPISINI*RRSSQP Trigger: TGGCTGGGAACTTCTCCTCCATATGTTGATGCTGAT...GGGTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGAGTATGGTCTTCATTTGCATATTGATCTTCTCGACACTTCACACACTGAAGCATCTCATGGAGTaGATGGGCCACAGCATGTAT | + |
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Preference number: 2 (lower is better) Translates to: EESMVFICILIFSTLHTLKHLME*MGHSMY Trigger: ATACATGCTGTGGCCCATTCACTCCATGAGATGCTT...CAGTGTGTGAAGTGTCGAGAAGATCAATATGCAAATGAAGACCATACTCTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTACACTTCTAAGTGATTaGCCCTTTGTTTGTCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: KQHHFPGSESSFRRSNKATLLSD*PFVCLP Trigger: TGGCAGACAAACAAAGGGCCAATCACTTAGAAGTGT...AGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR CCA 90 bp | TTGACTATGGGAGTTTCTCTGTGTTTCAGGAAGACGCAGAATATACCAGACGTAATCAGCATCAACATATaGAGGAGAAGTTCCCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LTMGVSLCFRKTQNIPDVISINI*RRSSQP Trigger: TGGCTGGGAACTTCTCCTCCATATGTTGATGCTGAT...TACGTCTGGTATATTCTGCGTCTTCCTGAAACACAGAGAAACTCCCATAGTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGAGTATGGTCTTCATTTGCATATTGATCTTCTCGACACTTCACACACTGAGCATGTATCACTCATaGCCATTCCAAGTGGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: EESMVFICILIFSTLHTLSMYHS*PFQVVS Trigger: GGACACCACTTGGAATGGCCATGAGTGATACATGCT...CAGTGTGTGAAGTGTCGAGAAGATCAATATGCAAATGAAGACCATACTCTCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
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| 3UTR CAA 90 bp | AGACACAACTTTTTGGAGGAAGAGAGTATGGTCTTCATTTGCATATaGATCTTCTCGACACTTCACACACTGATCCATGTACATGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: RHNFLEEESMVFICI*IFSTLHTLIHVHGG Trigger: CCCTCCATGTACATGGATCAGTGTGTGAAGTGTCGAGAAGATCAATATGCAAATGAAGACCATACTCTCTTCCTCCAAAAAGTTGTGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233415.2 |
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| 3UTR-3UTR TCA 90 bp | AAACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACCACAACACTTCTAAGTaGTTGGCCCTTTGTTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: KQVMCAGVRVNLCQVTAHHNTSK*LALCLS Trigger: AGACAAACAAAGGGCCAATCACTTAGAAGTGTTGTG...GTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTGTCTTAGAAAGAATCTGGTTGTCTaGGTGAATTCTTGCCGGCGA | + |
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Preference number: 2 (lower is better) Translates to: IFRVQSLPSEEAIKLCLRKNLVV*VNSCRR Trigger: TCGCCGGCAAGAATTCACTCAGACAACCAGATTCTT...TCTAAGACAAAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTCTATCCAGTTCCATTTaGAATGAACCATTAGGGACA | + |
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Preference number: 2 (lower is better) Translates to: SSTIFRVQSLPSEEAIKLLSSSI*NEPLGT Trigger: TGTCCCTAATGGTTCATTTCAAATGGAACTGGATAG...AAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
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| 3UTR-3UTR TCA 90 bp | AAACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACCTTCCCATCATTATTTaGCCACGTGTCTACTTGTTG | + |
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Preference number: 2 (lower is better) Translates to: KQVMCAGVRVNLCQVTAHLPIII*PRVYLL Trigger: CAACAAGTAGACACGTGGTCAAATAATGATGGGAAG...GTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
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| 3UTR-3UTR GCA 90 bp | ATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTGTCTTAGAGTAAGAGTAAATTTGTaGCAAGTCACTGCCCACCCC | + |
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Preference number: 2 (lower is better) Translates to: IFRVQSLPSEEAIKLCLRVRVNL*QVTAHP Trigger: GGGGTGGGCAGTGACTTGGCACAAATTTACTCTTAC...TCTAAGACAAAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTATTCATGGTGCCTTTaGCCCATGTCAAACTTTACT | + |
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Preference number: 2 (lower is better) Translates to: KQHHFPGSESSFRRSNKAYSWCL*PMSNFT Trigger: AGTAAAGTTTGACATGGGGCAAAGGCACCATGAATA...AGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR TCA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAACACAACACTTCTAAGTaGTTGGCCCTTTGTTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQHNTSK*LALCLS Trigger: AGACAAACAAAGGGCCAATCACTTAGAAGTGTTGTG...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR TCA 90 bp | ACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTGTCTTCACAACACTTCTAAGTaGTTGGCCCTTTGTTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: TIFRVQSLPSEEAIKLCLHNTSK*LALCLS Trigger: AGACAAACAAAGGGCCAATCACTTAGAAGTGTTGTG...AAGACAAAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTCTAAATAAGGACTCCTaGATTTATGCCAGTGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: SSTIFRVQSLPSEEAIKLLNKDS*IYASVF Trigger: GAAAACACTGGCATAAATTCAGGAGTCCTTATTTAG...AAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR TCA 90 bp | AGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTCTTCATTTGCATATTaGTCTTCTCGACACTTCACA | + |
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Preference number: 2 (lower is better) Translates to: SSTIFRVQSLPSEEAIKLSSFAY*SSRHFT Trigger: TGTGAAGTGTCGAGAAGATCAATATGCAAATGAAGA...AAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR TCA 90 bp | AAGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTCCAAGAAAGCTACAGTaGAACTTGTTAAAGCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: KQHHFPGSESSFRRSNKAPRKLQ*NLLKQK Trigger: CTTTTGCTTTAACAAGTTTCACTGTAGCTTTCTTGG...AGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR TCA 90 bp | ACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTGTCTTTTCGGGTTTCTGGTGTaGAAAAATGAATGTCCCAGA | + |
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Preference number: 2 (lower is better) Translates to: TIFRVQSLPSEEAIKLCLFGFLV*KNECPR Trigger: TCTGGGACATTCATTTTTTCACACCAGAAACCCGAA...AAGACAAAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
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| 3UTR-3UTR CCA 90 bp | AAACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACCAAACAATGATGATGTaGCCATGTACCATGTGTACA | + |
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Preference number: 2 (lower is better) Translates to: KQVMCAGVRVNLCQVTAHQTMMM*PCTMCT Trigger: TGTACACATGGTACATGGCCACATCATCATTGTTTG...GTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTGGATTTTCTGAATCCTaGTTTGCAAGGGATATTACA | + |
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Preference number: 2 (lower is better) Translates to: SSTIFRVQSLPSEEAIKLGFSES*FARDIT Trigger: TGTAATATCCCTTGCAAACCAGGATTCAGAAAATCC...AAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCAAAATTCCCTCTCTACTTATAGTTTAAAGAACGTTGGAGGAGACCTAAATAAGAATCTGGTTGTCTaGGTGAATTCTTGCCGGCGA | + |
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Preference number: 2 (lower is better) Translates to: LQNSLSTYSLKNVGGDLNKNLVV*VNSCRR Trigger: TCGCCGGCAAGAATTCACTCAGACAACCAGATTCTT...ATTTAGGTCTCCTCCAACGTTCTTTAAACTATAAGTAGAGAGGGAATTTTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR TCA 90 bp | TTGACTATGGGAGTTTCTCTGTGTTTCAGGAAGACGCAGAATATACCAGACGTACCAAGAAAGCTACAGTaGAACTTGTTAAAGCAAAAG | + |
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Preference number: 2 (lower is better) Translates to: LTMGVSLCFRKTQNIPDVPRKLQ*NLLKQK Trigger: CTTTTGCTTTAACAAGTTTCACTGTAGCTTTCTTGG...TACGTCTGGTATATTCTGCGTCTTCCTGAAACACAGAGAAACTCCCATAGTCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTAGTTATGCTAGACTaGAAAGATTTAGGGCCATTT | + |
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Preference number: 2 (lower is better) Translates to: KQHHFPGSESSFRRSNKALVMLD*KDLGPF Trigger: AAATGGCCCTAAATCTTTGCAGTCTAGCATAACTAA...AGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR GCA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAATATTCATGGTGCCTTTaGCCCATGTCAAACTTTACT | + |
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Preference number: 2 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQYSWCL*PMSNFT Trigger: AGTAAAGTTTGACATGGGGCAAAGGCACCATGAATA...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTAGTATGGTCTTCATTTaGATATTGATCTTCTCGACA | + |
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Preference number: 2 (lower is better) Translates to: KQHHFPGSESSFRRSNKASMVFI*ILIFST Trigger: TGTCGAGAAGATCAATATGCAAATGAAGACCATACT...AGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR GCA 90 bp | TATGGGAGTTTCTCTGTGTTTCAGGAAGACGCAGAATATACCAGACGTAAGGACCAGACCATGTGTTTTTaGATTTCTCCTCTCAATTTA | + |
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Preference number: 2 (lower is better) Translates to: YGSFSVFQEDAEYTRRKDQTMCF*ISPLNL Trigger: TAAATTGAGAGGAGAAATGCAAAAACACATGGTCTG...GTCCTTACGTCTGGTATATTCTGCGTCTTCCTGAAACACAGAGAAACTCCCATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
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| 3UTR-3UTR CCA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAACAAACAATGATGATGTaGCCATGTACCATGTGTACA | + |
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Preference number: 2 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQQTMMM*PCTMCT Trigger: TGTACACATGGTACATGGCCACATCATCATTGTTTG...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR CCA 90 bp | AAGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTCAGTTTTTGCATGTaGCTTCCTGAAATTTCGAAA | + |
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Preference number: 2 (lower is better) Translates to: KQHHFPGSESSFRRSNKAFSFCM*LPEISK Trigger: TTTCGAAATTTCAGGAAGCCACATGCAAAAACTGAA...AGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR CAA 90 bp | ATGGCCATTCCAAGTGGTGTCCTGAATAACCATTTAAATACAGTTTaGGTGGGACAATTCTTCAGCGTTTTACAATTAGATGGTGGCAAA | + |
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Preference number: 2 (lower is better) Translates to: MAIPSGVLNNHLNTV*VGQFFSVLQLDGGK Trigger: TTTGCCACCATCTAATTGTAAAACGCTGAAGAATTGTCCCACCAAAACTGTATTTAAATGGTTATTCAGGACACCACTTGGAATGGCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
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| 3UTR-3UTR TCA 90 bp | CTTCAAAATTCCCTCTCTACTTATAGTTTAAAGAACGTTGGAGGAGACCTAAATAGGGATATTACATGCTaGGGGAAGAATCTGATCCAC | + |
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Preference number: 2 (lower is better) Translates to: LQNSLSTYSLKNVGGDLNRDITC*GKNLIH Trigger: GTGGATCAGATTCTTCCCTCAGCATGTAATATCCCT...ATTTAGGTCTCCTCCAACGTTCTTTAAACTATAAGTAGAGAGGGAATTTTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGAGAGTATGGTCTTCATTTGCATATTGATCTTCTCGACACTTCACACACTGCTCCTTTCCCTATATTaGTTCTGCCACTTTTCAATA | + |
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Preference number: 2 (lower is better) Translates to: EESMVFICILIFSTLHTLLLSLY*FCHFSI Trigger: TATTGAAAAGTGGCAGAAGCAATATAGGGAAAGGAG...CAGTGTGTGAAGTGTCGAGAAGATCAATATGCAAATGAAGACCATACTCTCTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR CCA 90 bp | AAACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACTTCAGTTTTTGCATGTaGCTTCCTGAAATTTCGAAA | + |
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Preference number: 2 (lower is better) Translates to: KQVMCAGVRVNLCQVTAHFSFCM*LPEISK Trigger: TTTCGAAATTTCAGGAAGCCACATGCAAAAACTGAA...GTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTGTCTTAGACTAAATAAGGACTCCTaGATTTATGCCAGTGTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: IFRVQSLPSEEAIKLCLRLNKDS*IYASVF Trigger: GAAAACACTGGCATAAATTCAGGAGTCCTTATTTAG...TCTAAGACAAAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGACAATTCTTCAGCGTTTTACAATTAGATGGTGGCAAAGAACATCTAAAATACAGTTCCATTTGAAATaGACCATTAGGGACACCATG | + |
|
Preference number: 2 (lower is better) Translates to: GTILQRFTIRWWQRTSKIQFHLK*TIRDTM Trigger: CATGGTGTCCCTAATGGTTCATTTCAAATGGAACTG...TATTTTAGATGTTCTTTGCCACCATCTAATTGTAAAACGCTGAAGAATTGTCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
||
| 3UTR-3UTR GCA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAAGGACTCCTGAATTTATaGCAGTGTTTTCAATTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQGLLNL*QCFQFL Trigger: CAAAAATTGAAAACACTGGCATAAATTCAGGAGTCC...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR GCA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAATTAGTTATGCTAGACTaGAAAGATTTAGGGCCATTT | + |
|
Preference number: 2 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQLVMLD*KDLGPF Trigger: AAATGGCCCTAAATCTTTGCAGTCTAGCATAACTAA...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR GCA 90 bp | GAAGAGAGTATGGTCTTCATTTGCATATTGATCTTCTCGACACTTCACACACTGTTAGTTATGCTAGACTaGAAAGATTTAGGGCCATTT | + |
|
Preference number: 2 (lower is better) Translates to: EESMVFICILIFSTLHTLLVMLD*KDLGPF Trigger: AAATGGCCCTAAATCTTTGCAGTCTAGCATAACTAA...CAGTGTGTGAAGTGTCGAGAAGATCAATATGCAAATGAAGACCATACTCTCTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR GCA 90 bp | ATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTGTCTTAGACTCCTTTCCCTATATTaGTTCTGCCACTTTTCAATA | + |
|
Preference number: 2 (lower is better) Translates to: IFRVQSLPSEEAIKLCLRLLSLY*FCHFSI Trigger: TATTGAAAAGTGGCAGAAGCAATATAGGGAAAGGAG...TCTAAGACAAAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR GCA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAAAGTATGGTCTTCATTTaGATATTGATCTTCTCGACA | + |
|
Preference number: 2 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQSMVFI*ILIFST Trigger: TGTCGAGAAGATCAATATGCAAATGAAGACCATACT...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CCA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAATTTGATTTAAACCAATaGAGGACAAGATCTATGGGA | + |
|
Preference number: 2 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQFDLNQ*RTRSMG Trigger: TCCCATAGATCTTGTCCTCCATTGGTTTAAATCAAA...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
||
| 3UTR CAA 90 bp | ACAGACCATGTGTTTTTGCATTTCTCCTCTCAATTTAGAAAGGAATaGAATTCCATGGTCATCATTTGTAATCATCGCTCCTATCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: TDHVFLHFSSQFRKE*NSMVIICNHRSYPV Trigger: AACTGGATAGGAGCGATGATTACAAATGATGACCATGGAATTCAATTCCTTTCTAAATTGAGAGGAGAAATGCAAAAACACATGGTCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTAATGTCTTCAGAATAGAGAACATCTTCCAGGTGTCAAATTCAAGATCCTTCTCTTCATTTGCATATTaGTCTTCTCGACACTTCACA | + |
|
Preference number: 2 (lower is better) Translates to: CNVFRIENIFQVSNSRSFSSFAY*SSRHFT Trigger: TGTGAAGTGTCGAGAAGATCAATATGCAAATGAAGA...GAAGGATCTTGAATTTGACACCTGGAAGATGTTCTCTATTCTGAAGACATTACA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTCAAAATTCCCTCTCTACTTATAGTTTAAAGAACGTTGGAGGAGACCTAAATTATTCATGGTGCCTTTaGCCCATGTCAAACTTTACT | + |
|
Preference number: 2 (lower is better) Translates to: LQNSLSTYSLKNVGGDLNYSWCL*PMSNFT Trigger: AGTAAAGTTTGACATGGGGCAAAGGCACCATGAATA...ATTTAGGTCTCCTCCAACGTTCTTTAAACTATAAGTAGAGAGGGAATTTTGAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR TCA 90 bp | GGGACAATTCTTCAGCGTTTTACAATTAGATGGTGGCAAAGAACATCTAAAATATCTAAAAAGGCCTTTTaGTTTAAACCAATGGAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: GTILQRFTIRWWQRTSKISKKAF*FKPMED Trigger: GTCCTCCATTGGTTTAAATCAAAAGGCCTTTTTAGA...TATTTTAGATGTTCTTTGCCACCATCTAATTGTAAAACGCTGAAGAATTGTCCC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
||
| 3UTR-3UTR GCA 90 bp | CTTCAAAATTCCCTCTCTACTTATAGTTTAAAGAACGTTGGAGGAGACCTAAATGGACTCCTGAATTTATaGCAGTGTTTTCAATTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: LQNSLSTYSLKNVGGDLNGLLNL*QCFQFL Trigger: CAAAAATTGAAAACACTGGCATAAATTCAGGAGTCC...ATTTAGGTCTCCTCCAACGTTCTTTAAACTATAAGTAGAGAGGGAATTTTGAAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR TCA 72 bp | CATGGTGCATATGAGAATGATATACTTGGGTGCCCCTaGCACAAGCAGCCACCTCATTCTTCTTCCTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: HGAYENDILGCP*HKQPPHSSSWN Trigger: ATTCCAGGAAGAAGAATGAGGTGGCTGCTTGTGTCAGGGGCACCCAAGTATATCATTCTCATATGCACCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTGGTGTAAGAGTAAATTaGTGCCAAGTCACTGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: KQHHFPGSESSFRRSNKAGVRVN*CQVTAH Trigger: GTGGGCAGTGACTTGGCACAAATTTACTCTTACACC...AGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | TATGGGAGTTTCTCTGTGTTTCAGGAAGACGCAGAATATACCAGACGTAAGGACCTTGCCTTTGGTGCTTaGGTAGACAGGGATGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: YGSFSVFQEDAEYTRRKDLAFGA*VDRDES Trigger: ACTTTCATCCCTGTCTACCAAAGCACCAAAGGCAAG...GTCCTTACGTCTGGTATATTCTGCGTCTTCCTGAAACACAGAGAAACTCCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR TCA 72 bp | GCCCATGTATCCAAGGACACAGTAGAAGGCAATCACTaGACCTTTGTTGCAAACAATGATGATGTGGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: AHVSKDTVEGNH*TFVANNDDVAM Trigger: CATGGCCACATCATCATTGTTTGCAACAAAGGTTCAGTGATTGCCTTCTACTGTGTCCTTGGATACATGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR TCA 72 bp | TTTTCTGAATCCTGGTTTGCAAGGGATATTACATGCTaGGGGAAGAATCTGATCCACATCTGTAGCCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: FSESWFARDITC*GKNLIHICSPL Trigger: GAGTGGGCTACAGATGTGGATCAGATTCTTCCCTCAGCATGTAATATCCCTTGCAAACCAGGATTCAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
||
| 3UTR CCA 72 bp | GTGGCCATGTACCATGTGTACATCAGCATCAACATATaGAGGAGAAGTTCCCAGCCAAATTCCACAAAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: VAMYHVYISINI*RRSSQPNSTKN Trigger: ATTCTTTGTGGAATTTGGCTGGGAACTTCTCCTCCATATGTTGATGCTGATGTACACATGGTACATGGCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACCCTGGTCTGTATTCAAATaGAGACAGAAGGCAGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: TSNVCRCKSKFVPSHCPPWSVFK*RQKAVI Trigger: TATCACTGCCTTCTGTCTCAATTTGAATACAGACCA...GGGTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTCCTCCTTTCCCTATATaGCTTCTGCCACTTTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: KQHHFPGSESSFRRSNKAPPFPI*LLPLFN Trigger: ATTGAAAAGTGGCAGAAGCAATATAGGGAAAGGAGG...AGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAAGGTGTAAGAGTAAATTaGTGCCAAGTCACTGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQGVRVN*CQVTAH Trigger: GTGGGCAGTGACTTGGCACAAATTTACTCTTACACC...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR TCA 72 bp | GGTTTGCAAGGGATATTACATGCTGAGGGAAGAATCTaGTCCACATCTGTAGCCCACTCCATCATTTCTTTA | + |
|
Preference number: 3 (lower is better) Translates to: GLQGILHAEGRI*STSVAHSIISL Trigger: TAAAGAAATGATGGAGTGGGCTACAGATGTGGATCAGATTCTTCCCTCAGCATGTAATATCCCTTGCAAACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
||
| 3UTR TCA 72 bp | AACAGCAGATATCCATTTCTTCCTCAGGGGATTTTCTaGATCCTGGTTTGCAAGGGATATTACATGCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: NSRYPFLPQGIF*ILVCKGYYMLR Trigger: CCTCAGCATGTAATATCCCTTGCAAACCAGGATTCAGAAAATCCCCTGAGGAAGAAATGGATATCTGCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGACTATGGGAGTTTCTCTGTGTTTCAGGAAGACGCAGAATATACCAGACGTACCTCCTTTCCCTATATaGCTTCTGCCACTTTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: LTMGVSLCFRKTQNIPDVPPFPI*LLPLFN Trigger: ATTGAAAAGTGGCAGAAGCAATATAGGGAAAGGAGG...TACGTCTGGTATATTCTGCGTCTTCCTGAAACACAGAGAAACTCCCATAGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTAATAGACACAACTTTTaGGAGGAAGAGAGTATGGTC | + |
|
Preference number: 3 (lower is better) Translates to: KQHHFPGSESSFRRSNKANRHNF*EEESMV Trigger: GACCATACTCTCTTCCTCCAAAAAGTTGTGTCTATT...AGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTATCACTGAACCTTTGTaGCAAACAATGATGATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KQHHFPGSESSFRRSNKAITEPL*QTMMMW Trigger: CCACATCATCATTGTTTGCAACAAAGGTTCAGTGAT...AGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR TCA 72 bp | AGTGATTGGCCCTTTGTTTGTCTGCCACCTATGCCTTaGAATTTTCCAAGCCTTGATTATGAAGCTGGTTTA | + |
|
Preference number: 3 (lower is better) Translates to: SDWPFVCLPPMP*NFPSLDYEAGL Trigger: TAAACCAGCTTCATAATCAAGGCTTGGAAAATTTCAAGGCATAGGTGGCAGACAAACAAAGGGCCAATCACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACTGGTCTGTATTCAAATaGAGACAGAAGGCAGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: KQVMCAGVRVNLCQVTAHWSVFK*RQKAVI Trigger: TATCACTGCCTTCTGTCTCAATTTGAATACAGACCA...GTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACGTCTTCATTTGCATATaGATCTTCTCGACACTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: KQVMCAGVRVNLCQVTAHVFICI*IFSTLH Trigger: GTGAAGTGTCGAGAAGATCAATATGCAAATGAAGAC...GTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGACTATGGGAGTTTCTCTGTGTTTCAGGAAGACGCAGAATATACCAGACGTAGAGTATGGTCTTCATTaGCATATTGATCTTCTCGAC | + |
|
Preference number: 3 (lower is better) Translates to: LTMGVSLCFRKTQNIPDVEYGLH*HIDLLD Trigger: GTCGAGAAGATCAATATGCAAATGAAGACCATACTC...TACGTCTGGTATATTCTGCGTCTTCCTGAAACACAGAGAAACTCCCATAGTCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAAGTTTGGTTATTGGCTTaGACTATGGGAGTTTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQVWLLA*TMGVSL Trigger: CAGAGAAACTCCCATAGTCAAAGCCAATAACCAAAC...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAATGGTCTGTATTCAAATaGAGACAGAAGGCAGTGATA | + |
|
Preference number: 3 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQWSVFK*RQKAVI Trigger: TATCACTGCCTTCTGTCTCAATTTGAATACAGACCA...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | AAACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACTACATAGCTGAGAGTTaGGTTATTGGCTTTGACTAT | + |
|
Preference number: 3 (lower is better) Translates to: KQVMCAGVRVNLCQVTAHYIAES*VIGFDY Trigger: ATAGTCAAAGCCAATAACCAAACTCTCAGCTATGTA...GTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAAGCAATCACTGAACCTTaGTTGCAAACAATGATGATG | + |
|
Preference number: 3 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQAITEP*LQTMMM Trigger: CATCATCATTGTTTGCAACAAAGGTTCAGTGATTGC...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAAAATTCCCTCTCTACTTATAGTTTAAAGAACGTTGGAGGAGACCTAAATCTTGCCTTTGGTGCTTaGGTAGACAGGGATGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: LQNSLSTYSLKNVGGDLNLAFGA*VDRDES Trigger: ACTTTCATCCCTGTCTACCAAAGCACCAAAGGCAAG...ATTTAGGTCTCCTCCAACGTTCTTTAAACTATAAGTAGAGAGGGAATTTTGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR CCA 72 bp | GCAATCACTGAACCTTTGTTGCAAACAATGATGATGTaGCCATGTACCATGTGTACATCAGCATCAACATAT | + |
|
Preference number: 3 (lower is better) Translates to: AITEPLLQTMMM*PCTMCTSASTY Trigger: ATATGTTGATGCTGATGTACACATGGTACATGGCCACATCATCATTGTTTGCAACAAAGGTTCAGTGATTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAAGAAATTTTCCAAGCCTaGATTATGAAGCTGGTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQEIFQA*IMKLVY Trigger: GTAAACCAGCTTCATAATCAAGGCTTGGAAAATTTC...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTGTCTTGAAATTTTCCAAGCCTaGATTATGAAGCTGGTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: TIFRVQSLPSEEAIKLCLEIFQA*IMKLVY Trigger: GTAAACCAGCTTCATAATCAAGGCTTGGAAAATTTC...AAGACAAAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGTGGGACAATTCTTCAGCGTTTTACAATTAGATGGTGGCAAAGAACATCTGAGTATGGTCTTCATTaGCATATTGATCTTCTCGAC | + |
|
Preference number: 3 (lower is better) Translates to: FGGTILQRFTIRWWQRTSEYGLH*HIDLLD Trigger: GTCGAGAAGATCAATATGCAAATGAAGACCATACTC...AGATGTTCTTTGCCACCATCTAATTGTAAAACGCTGAAGAATTGTCCCACCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTGGTGGGACAATTCTTCAGCGTTTTACAATTAGATGGTGGCAAAGAACATCTAATAGACACAACTTTTaGGAGGAAGAGAGTATGGTC | + |
|
Preference number: 3 (lower is better) Translates to: FGGTILQRFTIRWWQRTSNRHNF*EEESMV Trigger: GACCATACTCTCTTCCTCCAAAAAGTTGTGTCTATT...AGATGTTCTTTGCCACCATCTAATTGTAAAACGCTGAAGAATTGTCCCACCAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTGTCTTTACATAGCTGAGAGTTaGGTTATTGGCTTTGACTAT | + |
|
Preference number: 3 (lower is better) Translates to: TIFRVQSLPSEEAIKLCLYIAES*VIGFDY Trigger: ATAGTCAAAGCCAATAACCAAACTCTCAGCTATGTA...AAGACAAAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAACCTGGAATAGTTATCTaGAATGCTAGTAGAACAGTA | + |
|
Preference number: 3 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQPGIVI*NASRTV Trigger: TACTGTTCTACTAGCATTCAAGATAACTATTCCAGG...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTGTCTTAGAATCACTGAACCTTTGTaGCAAACAATGATGATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: IFRVQSLPSEEAIKLCLRITEPL*QTMMMW Trigger: CCACATCATCATTGTTTGCAACAAAGGTTCAGTGAT...TCTAAGACAAAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAATCCATGTTTGTCATGTaGGAAATTTCATTTTCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQSMFVM*EISFSG Trigger: CCCTGAAAATGAAATTTCCAACATGACAAACATGGA...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
||
| 3UTR TCA 72 bp | CCTATTATAAAAATAGAACATCACAACACTTCTAAGTaGTTGGCCCTTTGTTTGTCTGCCACCTATGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: PIIKIEHHNTSK*LALCLSATYAL Trigger: CAAGGCATAGGTGGCAGACAAACAAAGGGCCAATCACTTAGAAGTGTTGTGATGTTCTATTTTTATAATAGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAATGTCTTCAGAATAGAGAACATCTTCCAGGTGTCAAATTCAAGATCCTTCGTCTTCATTTGCATATaGATCTTCTCGACACTTCAC | + |
|
Preference number: 3 (lower is better) Translates to: CNVFRIENIFQVSNSRSFVFICI*IFSTLH Trigger: GTGAAGTGTCGAGAAGATCAATATGCAAATGAAGAC...GAAGGATCTTGAATTTGACACCTGGAAGATGTTCTCTATTCTGAAGACATTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTAATGTCTTCAGAATAGAGAACATCTTCCAGGTGTCAAATTCAAGATCCTTCGCAATCACTGAACCTTaGTTGCAAACAATGATGATG | + |
|
Preference number: 3 (lower is better) Translates to: CNVFRIENIFQVSNSRSFAITEP*LQTMMM Trigger: CATCATCATTGTTTGCAACAAAGGTTCAGTGATTGC...GAAGGATCTTGAATTTGACACCTGGAAGATGTTCTCTATTCTGAAGACATTACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTGTCTTAGACATTTAAATACAGTTTaGGTGGGACAATTCTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: IFRVQSLPSEEAIKLCLRHLNTV*VGQFFS Trigger: GCTGAAGAATTGTCCCACCAAAACTGTATTTAAATG...TCTAAGACAAAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
||
| 3UTR TCA 72 bp | AAAAGTAATATTGGGAATTCTGCTTCAAATTATAGATaGCATGTGATGTGGAGAGCCGTGAGCAATCACCAT | + |
|
Preference number: 3 (lower is better) Translates to: KSNIGNSASNYR*HVMWRAVSNHH Trigger: ATGGTGATTGCTCACGGCTCTCCACATCACATGTCATCTATAATTTGAAGCAGAATTCCCAATATTACTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTGCTGAGGGAAGAATCTaGTCCACATCTGTAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSTIFRVQSLPSEEAIKLAEGRI*STSVAH Trigger: GTGGGCTACAGATGTGGATCAGATTCTTCCCTCAGC...AAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| CDS-3UTR TCA 90 bp | TTGACTATGGGAGTTTCTCTGTGTTTCAGGAAGACGCAGAATATACCAGACGTAGCTGAGGGAAGAATCTaGTCCACATCTGTAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LTMGVSLCFRKTQNIPDVAEGRI*STSVAH Trigger: GTGGGCTACAGATGTGGATCAGATTCTTCCCTCAGC...TACGTCTGGTATATTCTGCGTCTTCCTGAAACACAGAGAAACTCCCATAGTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233415.2 |
||
| CDS-3UTR TCA 90 bp | TTGGAGGAAGAGAGTATGGTCTTCATTTGCATATTGATCTTCTCGACACTTCACAAACCCTTGGTCCTGTaGAGGCTCGTTGCTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LEEESMVFICILIFSTLHKPLVL*RLVAPV Trigger: CACTGGAGCAACGAGCCTTCACAGGACCAAGGGTTT...GTGAAGTGTCGAGAAGATCAATATGCAAATGAAGACCATACTCTCTTCCTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233415.2 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTTGTCGGGCACCAATaGGAGGAAAAACCCTTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: KQHHFPGSESSFRRSNKAFVGHQ*EEKPLV Trigger: GACCAAGGGTTTTTCCTCCCATTGGTGCCCGACAAA...AGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233415.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACCCAGGGATATTACATGCTaGGGGAAGAATCTGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TSNVCRCKSKFVPSHCPPRDITC*GKNLIH Trigger: GTGGATCAGATTCTTCCCTCAGCATGTAATATCCCT...GGGTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTGTCTTAGAATACTTGGGTGCCCCTaGCACAAGCAGCCACCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: IFRVQSLPSEEAIKLCLRILGCP*HKQPPH Trigger: ATGAGGTGGCTGCTTGTGTCAGGGGCACCCAAGTAT...TCTAAGACAAAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063425.9 |
||
| CDS-3UTR CCA 90 bp | TATGGGAGTTTCTCTGTGTTTCAGGAAGACGCAGAATATACCAGACGTAAGGACTGTAGAGAAATGCCATaGCAGGAAGACAGGAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YGSFSVFQEDAEYTRRKDCREMP*QEDRSG Trigger: ACCACTCCTGTCTTCCTGCCATGGCATTTCTCTACA...GTCCTTACGTCTGGTATATTCTGCGTCTTCCTGAAACACAGAGAAACTCCCATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233415.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACCCTTCGGGTTTCTGGTGTaGAAAAATGAATGTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TSNVCRCKSKFVPSHCPPFGFLV*KNECPR Trigger: TCTGGGACATTCATTTTTTCACACCAGAAACCCGAA...GGGTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACCCCTTCCCATCATTATTTaGCCACGTGTCTACTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TSNVCRCKSKFVPSHCPPLPIII*PRVYLL Trigger: CAACAAGTAGACACGTGGTCAAATAATGATGGGAAG...GGGTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTAGGGATATTACATGCTaGGGGAAGAATCTGATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSTIFRVQSLPSEEAIKLRDITC*GKNLIH Trigger: GTGGATCAGATTCTTCCCTCAGCATGTAATATCCCT...AAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTATCAGCATCAACATATaGAGGAGAAGTTCCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTIFRVQSLPSEEAIKLISINI*RRSSQP Trigger: TGGCTGGGAACTTCTCCTCCATATGTTGATGCTGAT...AAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063425.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTCAGTTCCATTTGAAATaGACCATTAGGGACACCATG | + |
|
Preference number: 4 (lower is better) Translates to: SSTIFRVQSLPSEEAIKLQFHLK*TIRDTM Trigger: CATGGTGTCCCTAATGGTTCATTTCAAATGGAACTG...AAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTCAGTTCCATTTGAAATaGACCATTAGGGACACCATG | + |
|
Preference number: 4 (lower is better) Translates to: KQHHFPGSESSFRRSNKAQFHLK*TIRDTM Trigger: CATGGTGTCCCTAATGGTTCATTTCAAATGGAACTG...AGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| CDS-3UTR TCA 90 bp | AGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTTCGGGTTTCTGGTGTaGAAAAATGAATGTCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSTIFRVQSLPSEEAIKLFGFLV*KNECPR Trigger: TCTGGGACATTCATTTTTTCACACCAGAAACCCGAA...AAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| CDS-3UTR TCA 90 bp | AAGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTCTATCCAGTTCCATTTaGAATGAACCATTAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KQHHFPGSESSFRRSNKALSSSI*NEPLGT Trigger: TGTCCCTAATGGTTCATTTCAAATGGAACTGGATAG...AGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACCCTCTTCATTTGCATATTaGTCTTCTCGACACTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: TSNVCRCKSKFVPSHCPPSSFAY*SSRHFT Trigger: TGTGAAGTGTCGAGAAGATCAATATGCAAATGAAGA...GGGTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063425.9 |
||
| CDS-3UTR GCA 90 bp | TTGGAGGAAGAGAGTATGGTCTTCATTTGCATATTGATCTTCTCGACACTTCACCACGTGTCTACTTGTTaGAGAAGCATCTCATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LEEESMVFICILIFSTLHHVSTC*RSISWS Trigger: ACTCCATGAGATGCTTCTGCAACAAGTAGACACGTG...GTGAAGTGTCGAGAAGATCAATATGCAAATGAAGACCATACTCTCTTCCTCCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233415.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTAGCAGGTTTGGGAGATaGAATAGAAGCATTTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSTIFRVQSLPSEEAIKLSRFGR*NRSILS Trigger: TGACAAAATGCTTCTATTCCATCTCCCAAACCTGCT...AAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233415.2 |
||
| 3UTR CAA 72 bp | TTTGTCTGCCACCTATGCCTTGAAATTTTCCAAGCCTaGATTATGAAGCTGGTTTACTTAAAGTGGAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: FVCHLCLEIFQA*IMKLVYLKWST Trigger: GGTGCTCCACTTTAAGTAAACCAGCTTCATAATCAAGGCTTGGAAAATTTCAAGGCATAGGTGGCAGACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 ENSMUST00000233546.2 |
||
| CDS-3UTR GCA 90 bp | ATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTGTCTTAGACACGTGTCTACTTGTTaGAGAAGCATCTCATGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IFRVQSLPSEEAIKLCLRHVSTC*RSISWS Trigger: ACTCCATGAGATGCTTCTGCAACAAGTAGACACGTG...TCTAAGACAAAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTGTCTTAGAACAGGAGTGGTTGTGTaGAAAGGGAAACATCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: IFRVQSLPSEEAIKLCLRTGVVV*KGKHPN Trigger: ATTGGGATGTTTCCCTTTCCACACAACCACTCCTGT...TCTAAGACAAAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233415.2 |
||
| CDS-3UTR TCA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAACTATCCAGTTCCATTTaGAATGAACCATTAGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQLSSSI*NEPLGT Trigger: TGTCCCTAATGGTTCATTTCAAATGGAACTGGATAG...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| CDS-3UTR CCA 90 bp | AGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTATGTCCACCATAGTTTaGCAAAAGAAAATTCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: SSTIFRVQSLPSEEAIKLMSTIV*QKKIHY Trigger: GTAGTGAATTTTCTTTTGCCAAACTATGGTGGACAT...AAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACGGATTTTCTGAATCCTaGTTTGCAAGGGATATTACA | + |
|
Preference number: 4 (lower is better) Translates to: KQVMCAGVRVNLCQVTAHGFSES*FARDIT Trigger: TGTAATATCCCTTGCAAACCAGGATTCAGAAAATCC...GTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| CDS-3UTR CCA 90 bp | AAACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACCCATGTTTGTCATGTTaGAAATTTCATTTTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KQVMCAGVRVNLCQVTAHPCLSC*KFHFQG Trigger: GCCCTGAAAATGAAATTTCCAACATGACAAACATGG...GTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063425.9 |
||
| CDS-3UTR CCA 90 bp | AGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTTCAGTTTTTGCATGTaGCTTCCTGAAATTTCGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSTIFRVQSLPSEEAIKLFSFCM*LPEISK Trigger: TTTCGAAATTTCAGGAAGCCACATGCAAAAACTGAA...AAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000063425.9 |
||
| CDS-3UTR TCA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAATCTAAAAAGGCCTTTTaGTTTAAACCAATGGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQSKKAF*FKPMED Trigger: GTCCTCCATTGGTTTAAATCAAAAGGCCTTTTTAGA...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| 3UTR CAA 72 bp | TTTTTGGAGGAAGAGAGTATGGTCTTCATTTGCATATaGATCTTCTCGACACTTCACACACTGATCCATGTA | + |
|
Preference number: 4 (lower is better) Translates to: FLEEESMVFICI*IFSTLHTLIHV Trigger: TACATGGATCAGTGTGTGAAGTGTCGAGAAGATCAATATGCAAATGAAGACCATACTCTCTTCCTCCAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233415.2 |
||
| 3UTR CAA 72 bp | TTTTTGGAGGAAGAGAGTATGGTCTTCATTTGCATATaGATCTTCTCGACACTTCACACACTGATCCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: FLEEESMVFICI*IFSTLHTLIHV Trigger: AACATGGATCAGTGTGTGAAGTGTCGAGAAGATCAATATGCAAATGAAGACCATACTCTCTTCCTCCAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
||
| CDS-3UTR TCA 90 bp | CTTCAAAATTCCCTCTCTACTTATAGTTTAAAGAACGTTGGAGGAGACCTAAATCTTCCCATCATTATTTaGCCACGTGTCTACTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LQNSLSTYSLKNVGGDLNLPIII*PRVYLL Trigger: CAACAAGTAGACACGTGGTCAAATAATGATGGGAAG...ATTTAGGTCTCCTCCAACGTTCTTTAAACTATAAGTAGAGAGGGAATTTTGAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| CDS-3UTR GCA 90 bp | ACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTGTCTTAGTATGGTCTTCATTTaGATATTGATCTTCTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: TIFRVQSLPSEEAIKLCLSMVFI*ILIFST Trigger: TGTCGAGAAGATCAATATGCAAATGAAGACCATACT...AAGACAAAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063425.9 |
||
| CDS-3UTR CCA 90 bp | ACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTGTCTTTTTGATTTAAACCAATaGAGGACAAGATCTATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TIFRVQSLPSEEAIKLCLFDLNQ*RTRSMG Trigger: TCCCATAGATCTTGTCCTCCATTGGTTTAAATCAAA...AAGACAAAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| CDS-3UTR CCA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAAATGTCCACCATAGTTTaGCAAAAGAAAATTCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQMSTIV*QKKIHY Trigger: GTAGTGAATTTTCTTTTGCCAAACTATGGTGGACAT...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| 3UTR CAA 72 bp | TGTGTCCTTTGGAGATATCTGGTAAAGGTGAGGAAATaGCTCATTATCACTCAAAGAAAGATGAAAATGACC | + |
|
Preference number: 4 (lower is better) Translates to: CVLWRYLVKVRK*LIITQRKMKMT Trigger: GGTCATTTTCATCTTTCTTTGAGTGATAATGAGCAATTTCCTCACCTTTACCAGATATCTCCAAAGGACACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
||
| 3UTR CAA 72 bp | CCAAGTGGTGTCCTGAATAACCATTTAAATACAGTTTaGGTGGGACAATTCTTCAGCGTTTTACAATTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PSGVLNNHLNTV*VGQFFSVLQLD Trigger: ATCTAATTGTAAAACGCTGAAGAATTGTCCCACCAAAACTGTATTTAAATGGTTATTCAGGACACCACTTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233546.2 |
||
| CDS-3UTR GCA 90 bp | CTTCAAAATTCCCTCTCTACTTATAGTTTAAAGAACGTTGGAGGAGACCTAAATCAGACCATGTGTTTTTaGATTTCTCCTCTCAATTTA | + |
|
Preference number: 4 (lower is better) Translates to: LQNSLSTYSLKNVGGDLNQTMCF*ISPLNL Trigger: TAAATTGAGAGGAGAAATGCAAAAACACATGGTCTG...ATTTAGGTCTCCTCCAACGTTCTTTAAACTATAAGTAGAGAGGGAATTTTGAAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAAAATTCCCTCTCTACTTATAGTTTAAAGAACGTTGGAGGAGACCTAAATTTTGATTTAAACCAATaGAGGACAAGATCTATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LQNSLSTYSLKNVGGDLNFDLNQ*RTRSMG Trigger: TCCCATAGATCTTGTCCTCCATTGGTTTAAATCAAA...ATTTAGGTCTCCTCCAACGTTCTTTAAACTATAAGTAGAGAGGGAATTTTGAAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
||
| CDS CCA 90 bp | CCTTGGTCCTGTGAAGGCTCGTTGCTCCAGTGTAGAGAAATGCCATaGCAGGAAGACAGGAGTGGTTGTGTGGAAAGGGAAACATCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: PWSCEGSLLQCREMP*QEDRSGCVERETSQ Trigger: TTGGGATGTTTCCCTTTCCACACAACCACTCCTGTCTTCCTGCCATGGCATTTCTCTACACTGGAGCAACGAGCCTTCACAGGACCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233415.2 |
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| CDS CCA 90 bp | TCCAGTGTAGAGAAATGCCATGGCAGGAAGACAGGAGTGGTTGTGTaGAAAGGGAAACATCCCAATAGAAGCAGGTTTGGGAGATGGAAT | + |
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Preference number: 5 (lower is better) Translates to: SSVEKCHGRKTGVVV*KGKHPNRSRFGRWN Trigger: ATTCCATCTCCCAAACCTGCTTCTATTGGGATGTTTCCCTTTCCACACAACCACTCCTGTCTTCCTGCCATGGCATTTCTCTACACTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233415.2 |
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| CDS-3UTR CAA 90 bp | ACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACCCGGAAGACAGGAGTGGTaGTGTGGAAAGGGAAACATC | + |
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Preference number: 5 (lower is better) Translates to: TSNVCRCKSKFVPSHCPPGRQEW*CGKGNI Trigger: GATGTTTCCCTTTCCACACAACCACTCCTGTCTTCC...GGGTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233415.2 |
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| CDS-3UTR CAA 90 bp | ACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACCCCTTGCCTTTGGTGCTTaGGTAGACAGGGATGAAAGT | + |
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Preference number: 5 (lower is better) Translates to: TSNVCRCKSKFVPSHCPPLAFGA*VDRDES Trigger: ACTTTCATCCCTGTCTACCAAAGCACCAAAGGCAAG...GGGTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063425.9 |
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| CDS-3UTR CAA 90 bp | CATGGTGCCTTTGCCCCATGTCAAACTTTACTCTTAGCTTTTATGCACATTCAACCACGTGTCTACTTGTaGCAGAAGCATCTCATGGAG | + |
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Preference number: 5 (lower is better) Translates to: HGAFAPCQTLLLAFMHIQPRVYL*QKHLME Trigger: CTCCATGAGATGCTTCTGCAACAAGTAGACACGTGG...TTGAATGTGCATAAAAGCTAAGAGTAAAGTTTGACATGGGGCAAAGGCACCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
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| CDS-3UTR CAA 90 bp | ACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACCCGTTTGGTTATTGGCTTaGACTATGGGAGTTTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: TSNVCRCKSKFVPSHCPPVWLLA*TMGVSL Trigger: CAGAGAAACTCCCATAGTCAAAGCCAATAACCAAAC...GGGTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000063425.9 |
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| CDS-3UTR CAA 90 bp | ACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACCCAATAGACACAACTTTTaGGAGGAAGAGAGTATGGTC | + |
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Preference number: 5 (lower is better) Translates to: TSNVCRCKSKFVPSHCPPNRHNF*EEESMV Trigger: GACCATACTCTCTTCCTCCAAAAAGTTGTGTCTATT...GGGTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063425.9 |
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| CDS-3UTR CAA 90 bp | AAGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTGTCTTCATTTGCATATaGATCTTCTCGACACTTCAC | + |
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Preference number: 5 (lower is better) Translates to: KQHHFPGSESSFRRSNKAVFICI*IFSTLH Trigger: GTGAAGTGTCGAGAAGATCAATATGCAAATGAAGAC...AGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063425.9 |
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| CDS-3UTR CAA 90 bp | ACAAGTAATGTGTGCAGGTGTAAGAGTAAATTTGTGCCAAGTCACTGCCCACCCCCTGGAATAGTTATCTaGAATGCTAGTAGAACAGTA | + |
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Preference number: 5 (lower is better) Translates to: TSNVCRCKSKFVPSHCPPPGIVI*NASRTV Trigger: TACTGTTCTACTAGCATTCAAGATAACTATTCCAGG...GGGTGGGCAGTGACTTGGCACAAATTTACTCTTACACCTGCACACATTACTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000063425.9 |
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| CDS-3UTR CAA 90 bp | AAGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTACAGACCATGTGTTTTaGCATTTCTCCTCTCAATTT | + |
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Preference number: 5 (lower is better) Translates to: KQHHFPGSESSFRRSNKATDHVF*HFSSQF Trigger: AAATTGAGAGGAGAAATGCAAAAACACATGGTCTGT...AGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
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| CDS-3UTR CAA 90 bp | AGCAGCACCATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTACAGACCATGTGTTTTaGCATTTCTCCTCTCAATTT | + |
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Preference number: 5 (lower is better) Translates to: SSTIFRVQSLPSEEAIKLTDHVF*HFSSQF Trigger: AAATTGAGAGGAGAAATGCAAAAACACATGGTCTGT...AAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAATGGTGCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000063425.9 ENSMUST00000233415.2 |
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| CDS-3UTR CAA 90 bp | GAAGAGAGTATGGTCTTCATTTGCATATTGATCTTCTCGACACTTCACACACTGCATTTAAATACAGTTTaGGTGGGACAATTCTTCAGC | + |
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Preference number: 5 (lower is better) Translates to: EESMVFICILIFSTLHTLHLNTV*VGQFFS Trigger: GCTGAAGAATTGTCCCACCAAAACTGTATTTAAATG...CAGTGTGTGAAGTGTCGAGAAGATCAATATGCAAATGAAGACCATACTCTCTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233415.2 |
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| CDS-3UTR CAA 90 bp | ATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTGTCTTAGAGAGTATGGTCTTCATTaGCATATTGATCTTCTCGAC | + |
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Preference number: 5 (lower is better) Translates to: IFRVQSLPSEEAIKLCLREYGLH*HIDLLD Trigger: GTCGAGAAGATCAATATGCAAATGAAGACCATACTC...TCTAAGACAAAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063425.9 |
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| CDS-3UTR CAA 90 bp | CTTCAAAATTCCCTCTCTACTTATAGTTTAAAGAACGTTGGAGGAGACCTAAATCCAATAGAAGCAGGTTaGGGAGATGGAATAGAAGCA | + |
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Preference number: 5 (lower is better) Translates to: LQNSLSTYSLKNVGGDLNPIEAG*GDGIEA Trigger: TGCTTCTATTCCATCTCCCAAACCTGCTTCTATTGG...ATTTAGGTCTCCTCCAACGTTCTTTAAACTATAAGTAGAGAGGGAATTTTGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233415.2 |
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| CDS-3UTR CAA 90 bp | ATTTTCCGGGTTCAGAGTCTTCCTTCAGAAGAAGCAATAAAGCTTTGTCTTAGATACATAGCTGAGAGTTaGGTTATTGGCTTTGACTAT | + |
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Preference number: 5 (lower is better) Translates to: IFRVQSLPSEEAIKLCLRYIAES*VIGFDY Trigger: ATAGTCAAAGCCAATAACCAAACTCTCAGCTATGTA...TCTAAGACAAAGCTTTATTGCTTCTTCTGAAGGAAGACTCTGAACCCGGAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000063425.9 |
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| CDS-3UTR CAA 90 bp | CTTCAAAATTCCCTCTCTACTTATAGTTTAAAGAACGTTGGAGGAGACCTAAATTCCATGTTTGTCATGTaGGAAATTTCATTTTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: LQNSLSTYSLKNVGGDLNSMFVM*EISFSG Trigger: CCCTGAAAATGAAATTTCCAACATGACAAACATGGA...ATTTAGGTCTCCTCCAACGTTCTTTAAACTATAAGTAGAGAGGGAATTTTGAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000063425.9 |
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| CDS CCA 72 bp | GTGGTTTTGTCGGGCACCAATGGGAGGAAAAACCCTTaGTCCTGTGAAGGCTCGTTGCTCCAGTGTAGAGAA | + |
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Preference number: 6 (lower is better) Translates to: VVLSGTNGRKNP*SCEGSLLQCRE Trigger: TTCTCTACACTGGAGCAACGAGCCTTCACAGGACCAAGGGTTTTTCCTCCCATTGGTGCCCGACAAAACCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233415.2 |
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| CDS CAA 72 bp | TTGTGTGGAAAGGGAAACATCCCAATAGAAGCAGGTTaGGGAGATGGAATAGAAGCATTTTGTCATGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: LCGKGNIPIEAG*GDGIEAFCHVG Trigger: TCCAACATGACAAAATGCTTCTATTCCATCTCCCAAACCTGCTTCTATTGGGATGTTTCCCTTTCCACACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233415.2 |
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