Pregenerated sensors for VMN2R71 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091205Ensembl transcript IDs: ENSMUST00000172338.3
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | CTCAGGCATCCACCTCATTCTTCTTCCTGGAACAGTTATCTTGAATaGCAGTACTACAATAACTGTCTTGGCCAAGATAGTAGAAGTAGC | + |
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Preference number: 5 (lower is better) Translates to: LRHPPHSSSWNSYLE*QYYNNCLGQDSRSS Trigger: GCTACTTCTACTATCTTGGCCAAGACAGTTATTGTAGTACTGGCATTCAAGATAACTGTTCCAGGAAGAAGAATGAGGTGGATGCCTGAG 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS CCA 90 bp | CTGAGTCCTGGACTGCAAGGCACACTACATATTGAGGGTAGAATCTaGTCAATATCTGTAGCCCACTCCATCATTTCTTTAGCCATATAT | + |
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Preference number: 5 (lower is better) Translates to: LSPGLQGTLHIEGRI*SISVAHSIISLAIY Trigger: ATATATGGCTAAAGAAATGATGGAGTGGGCTACAGATATTGACCAGATTCTACCCTCAATATGTAGTGTGCCTTGCAGTCCAGGACTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS TCA 90 bp | TGGTCATCATTTGTAATGATTACTCCTATCCAGTTCCATCTGAAATaGACAAATAGGGACACCATGGCTAGTGGTAGAGATGTGTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: WSSFVMITPIQFHLK*TNRDTMASGRDVSL Trigger: CAAGGACACATCTCTACCACTAGCCATGGTGTCCCTATTTGTTCATTTCAGATGGAACTGGATAGGAGTAATCATTACAAATGATGACCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS TCA 90 bp | ATCATATCAAATTGTGATGCACTAACCCAGATTCTAAAAATGCCTTaGGATTTCCATGCTGTGAGAACATACTTTATGGGAGAGTCTTTG | + |
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Preference number: 5 (lower is better) Translates to: IISNCDALTQILKMP*DFHAVRTYFMGESL Trigger: CAAAGACTCTCCCATAAAGTATGTTCTCACAGCATGGAAATCTCAAGGCATTTTTAGAATCTGGGTTAGTGCATCACAATTTGATATGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS TCA 72 bp | AACAGCAGATATCCTTTCCTTCCTGAGGGGATTTTCTaGGTCCTGGACTGCAAGGCACACTACATATTGAGG | + |
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Preference number: 6 (lower is better) Translates to: NSRYPFLPEGIF*VLDCKAHYILR Trigger: CCTCAATATGTAGTGTGCCTTGCAGTCCAGGACTCAGAAAATCCCCTCAGGAAGGAAAGGATATCTGCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS TCA 72 bp | CCAAGAGTCAAATTCCAGTTCCTTCCCAGCATTCTTTaGCCATGTGTCTACTTCTTGCAGAAGCATCTCATG | + |
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Preference number: 6 (lower is better) Translates to: PRVKFQFLPSIL*PCVYFLQKHLM Trigger: CATGAGATGCTTCTGCAAGAAGTAGACACATGGTCAAAGAATGCTGGGAAGGAACTGGAATTTGACTCTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS TCA 72 bp | ATGTATCAGGCAGATTCCTGGCCAAGAAAGCTACAGTaGAACTTGCTAGAGCAAGAGAGCCCATATATCCAA | + |
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Preference number: 6 (lower is better) Translates to: MYQADSWPRKLQ*NLLEQESPYIQ Trigger: TTGGATATATGGGCTCTCTTGCTCTAGCAAGTTTCACTGTAGCTTTCTTGGCCAGGAATCTGCCTGATACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS CAA 72 bp | GGCATCCACCTCATTCTTCTTCCTGGAACAGTTATCTaGAATGCCAGTACTACAATAACTGTCTTGGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: GIHLILLPGTVI*NASTTITVLAK Trigger: CTTGGCCAAGACAGTTATTGTAGTACTGGCATTCAAGATAACTGTTCCAGGAAGAAGAATGAGGTGGATGCC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS CCA 72 bp | GGACTGCAAGGCACACTACATATTGAGGGTAGAATCTaGTCAATATCTGTAGCCCACTCCATCATTTCTTTA | + |
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Preference number: 6 (lower is better) Translates to: GLQGTLHIEGRI*SISVAHSIISL Trigger: TAAAGAAATGATGGAGTGGGCTACAGATATTGACCAGATTCTACCCTCAATATGTAGTGTGCCTTGCAGTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS CAA 72 bp | TCCAAGAGTCAAATTCCAGTTCCTTCCCAGCATTCTTaGACCATGTGTCTACTTCTTGCAGAAGCATCTCAT | + |
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Preference number: 6 (lower is better) Translates to: SKSQIPVPSQHS*TMCLLLAEASH Trigger: ATGAGATGCTTCTGCAAGAAGTAGACACATGGTCAAAGAATGCTGGGAAGGAACTGGAATTTGACTCTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS CAA 90 bp | AGAACATCTTCCAAGAGTCAAATTCCAGTTCCTTCCCAGCATTCTTaGACCATGTGTCTACTTCTTGCAGAAGCATCTCATGAAGTGAGT | + |
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Preference number: 6 (lower is better) Translates to: RTSSKSQIPVPSQHS*TMCLLLAEASHEVS Trigger: ACTCACTTCATGAGATGCTTCTGCAAGAAGTAGACACATGGTCAAAGAATGCTGGGAAGGAACTGGAATTTGACTCTTGGAAGATGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS CAA 90 bp | CTTCCTGGAACAGTTATCTTGAATGCCAGTACTACAATAACTGTCTaGGCCAAGATAGTAGAAGTAGCCACAGTGAACCCAATGGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: LPGTVILNASTTITV*AKIVEVATVNPMAN Trigger: ATTTGCCATTGGGTTCACTGTGGCTACTTCTACTATCTTGGCCAAGACAGTTATTGTAGTACTGGCATTCAAGATAACTGTTCCAGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS TCA 72 bp | AGCATGTATCACTCATGGCCATTCCAAGTGGTGTCCTaGATAACCATGCAAATACACTTTTGGTTGGACAAT | + |
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Preference number: 6 (lower is better) Translates to: SMYHSWPFQVVS*ITMQIHFWLDN Trigger: ATTGTCCAACCAAAAGTGTATTTGCATGGTTATTCAGGACACCACTTGGAATGGCCATGAGTGATACATGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS GCA 72 bp | CCACCTCATTCTTCTTCCTGGAACAGTTATCTTGAATaGCAGTACTACAATAACTGTCTTGGCCAAGATAGT | + |
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Preference number: 6 (lower is better) Translates to: PPHSSSWNSYLE*QYYNNCLGQDS Trigger: ACTATCTTGGCCAAGACAGTTATTGTAGTACTGGCATTCAAGATAACTGTTCCAGGAAGAAGAATGAGGTGG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS CCA 72 bp | GTGTCCATGTACCATTTGTACATCAGCATCAACAAATaGAGGAGAAGTTCCAAGCCAGATTCCACAAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: VSMYHLYISINK*RRSSKPDSTKN Trigger: ATTCTTTGTGGAATCTGGCTTGGAACTTCTCCTCCATTTGTTGATGCTGATGTACAAATGGTACATGGACAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS CAA 72 bp | ACAGTTATCTTGAATGCCAGTACTACAATAACTGTCTaGGCCAAGATAGTAGAAGTAGCCACAGTGAACCCA | + |
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Preference number: 6 (lower is better) Translates to: TVILNASTTITV*AKIVEVATVNP Trigger: TGGGTTCACTGTGGCTACTTCTACTATCTTGGCCAAGACAGTTATTGTAGTACTGGCATTCAAGATAACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS CAA 90 bp | ATGGCCATTCCAAGTGGTGTCCTGAATAACCATGCAAATACACTTTaGGTTGGACAATTCTTCAGCTTCTTACAATTAGATGGTGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: MAIPSGVLNNHANTL*VGQFFSFLQLDGGK Trigger: TTTGCCACCATCTAATTGTAAGAAGCTGAAGAATTGTCCAACCAAAAGTGTATTTGCATGGTTATTCAGGACACCACTTGGAATGGCCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS TCA 72 bp | GCCCACTCCATCATTTCTTTAGCCATATATAGCTGTTaGCCACTTAGAAGATGCCCTGAAAATCTTCCTATT | + |
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Preference number: 6 (lower is better) Translates to: AHSIISLAIYSC*PLRRCPENLPI Trigger: AATAGGAAGATTTTCAGGGCATCTTCTAAGTGGTCAACAGCTATATATGGCTAAAGAAATGATGGAGTGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS TCA 72 bp | GCCCATATATCCAAGGACACAGTAAAAGGCAATCACTaGACCTTTGTTGCAAATAATGATGATGTGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: AHISKDTVKGNH*TFVANNDDVSM Trigger: CATGGACACATCATCATTATTTGCAACAAAGGTTCAGTGATTGCCTTTTACTGTGTCCTTGGATATATGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS TCA 72 bp | TTTGTAATGATTACTCCTATCCAGTTCCATCTGAAATaGACAAATAGGGACACCATGGCTAGTGGTAGAGAT | + |
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Preference number: 6 (lower is better) Translates to: FVMITPIQFHLK*TNRDTMASGRD Trigger: ATCTCTACCACTAGCCATGGTGTCCCTATTTGTTCATTTCAGATGGAACTGGATAGGAGTAATCATTACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS CCA 72 bp | TTTGGTTGGACAATTCTTCAGCTTCTTACAATTAGATaGTGGCAAAGAACATCTAAAATATGTCCACCACAG | + |
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Preference number: 6 (lower is better) Translates to: FGWTILQLLTIR*WQRTSKICPPQ Trigger: CTGTGGTGGACATATTTTAGATGTTCTTTGCCACCATCTAATTGTAAGAAGCTGAAGAATTGTCCAACCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS CAA 72 bp | TTTGTTGCAAATAATGATGATGTGTCCATGTACCATTaGTACATCAGCATCAACAAATGGAGGAGAAGTTCC | + |
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Preference number: 6 (lower is better) Translates to: FVANNDDVSMYH*YISINKWRRSS Trigger: GGAACTTCTCCTCCATTTGTTGATGCTGATGTACAAATGGTACATGGACACATCATCATTATTTGCAACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS CCA 72 bp | ATATCTCCTTTCAATTCAGAAAGGAATTGTATTCCGTaGTCATCATTTGTAATGATTACTCCTATCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: ISPFNSERNCIP*SSFVMITPIQF Trigger: GAACTGGATAGGAGTAATCATTACAAATGATGACCACGGAATACAATTCCTTTCTGAATTGAAAGGAGATAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS CCA 72 bp | ATATGTAACTCTTTAAGGGCCATGTACACCTCAGTTTaGATAATAATAGCAACTGATAAGCAAACAATGCTT | + |
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Preference number: 6 (lower is better) Translates to: ICNSLRAMYTSV*IIIATDKQTML Trigger: AAGCATTGTTTGCTTATCAGTTGCTATTATTATCCAAACTGAGGTGTACATGGCCCTTAAAGAGTTACATAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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| CDS CAA 72 bp | CGTCCATTACATTCAGTATTAACTAGCAGAGAAATGTaGGGCAAAATATGGCAGTTCTTATTTATTTCTTCC | + |
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Preference number: 6 (lower is better) Translates to: RPLHSVLTSREM*GKIWQFLFISS Trigger: GGAAGAAATAAATAAGAACTGCCATATTTTGCCCAACATTTCTCTGCTAGTTAATACTGAATGTAATGGACG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172338.3 |
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