Pregenerated sensors for VMN2R7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062200Ensembl transcript IDs: ENSMUST00000161972.10, ENSMUST00000168072.4, ENSMUST00000233255.2
Found 157 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGACAGGAAGCCCTAGGGAGTTTAGAGGTCTGGTGGGGTTGGGGATaGAGGGCAGGGACACCCTCGTGGAGACAGTGGTACAGGGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: RQEALGSLEVWWGWG*RAGTPSWRQWYREE Trigger: CTCCTCCCTGTACCACTGTCTCCACGAGGGTGTCCCTGCCCTCCATCCCCAACCCCACCAGACCTCTAAACTCCCTAGGGCTTCCTGTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR CCA 90 bp | CTCAAGAGACAGGAAGCCCTAGGGAGTTTAGAGGTCTGGTGGGGTTaGGGATGGAGGGCAGGGACACCCTCGTGGAGACAGTGGTACAGG | + |
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Preference number: 1 (lower is better) Translates to: LKRQEALGSLEVWWG*GWRAGTPSWRQWYR Trigger: CCTGTACCACTGTCTCCACGAGGGTGTCCCTGCCCTCCATCCCCAACCCCACCAGACCTCTAAACTCCCTAGGGCTTCCTGTCTCTTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR CCA 90 bp | TACCTAAACCTCAAGAGACAGGAAGCCCTAGGGAGTTTAGAGGTCTaGTGGGGTTGGGGATGGAGGGCAGGGACACCCTCGTGGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: YLNLKRQEALGSLEV*WGWGWRAGTPSWRQ Trigger: CTGTCTCCACGAGGGTGTCCCTGCCCTCCATCCCCAACCCCACCAGACCTCTAAACTCCCTAGGGCTTCCTGTCTCTTGAGGTTTAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR TCA 90 bp | CTTCTGTGTTTGGTAGGCCCCGGCATAGTCTCACAAGAGACAGTTTaGACAGGGTCCATACAGCAAAATCTTGCTGGTGTATGCAATGGT | + |
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Preference number: 1 (lower is better) Translates to: LLCLVGPGIVSQETV*TGSIQQNLAGVCNG Trigger: ACCATTGCATACACCAGCAAGATTTTGCTGTATGGACCCTGTTCAAACTGTCTCTTGTGAGACTATGCCGGGGCCTACCAAACACAGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR GCA 90 bp | ATCCCAACACCCAGAAATACCACTCTTGGGAATATACCCAAAAGATaGCTCACCATGCCACAAGGGCACATGTTCCACTATGTTCATAGT | + |
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Preference number: 1 (lower is better) Translates to: IPTPRNTTLGNIPKR*LTMPQGHMFHYVHS Trigger: ACTATGAACATAGTGGAACATGTGCCCTTGTGGCATGGTGAGGCATCTTTTGGGTATATTCCCAAGAGTGGTATTTCTGGGTGTTGGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR TCA 90 bp | CATGAGCATCCGCAGCTGCTTGAAAAACAATGTTCAGAGGAAGATTaGGCTATGCCATTATCCAGCTTTGCATGTCACATGGATCTCACT | + |
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Preference number: 1 (lower is better) Translates to: HEHPQLLEKQCSEED*AMPLSSFACHMDLT Trigger: AGTGAGATCCATGTGACATGCAAAGCTGGATAATGGCATAGCTCAATCTTCCTCTGAACATTGTTTTTCAAGCAGCTGCGGATGCTCATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR GCA 90 bp | TTCTCTCCCCCTGCTCTGAAGTCACGACAATGTTCTTACTCTCAATaGCTTTTCTCTGAAAGCTATACTTATACTTCTAAGTTCTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: FSPPALKSRQCSYSQ*LFSESYTYTSKFFL Trigger: CAAGAAGAACTTAGAAGTATAAGTATAGCTTTCAGAGAAAAGGCATTGAGAGTAAGAACATTGTCGTGACTTCAGAGCAGGGGGAGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR CCA 90 bp | ACTCTACACAGTTGCTGGTGGGATGGCAAACTGGTACAATTACTCTaGAAATCAATCTGGAGTTTGTTCAGAAAATTAGAAATAGAACTA | + |
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Preference number: 1 (lower is better) Translates to: TLHSCWWDGKLVQLL*KSIWSLFRKLEIEL Trigger: TAGTTCTATTTCTAATTTTCTGAACAAACTCCAGATTGATTTCCAGAGTAATTGTACCAGTTTGCCATCCCACCAGCAACTGTGTAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR CAA 90 bp | CCTCAAGAGACAGGAAGCCCTAGGGAGTTTAGAGGTCTGGTGGGGTaGGGGATGGAGGGCAGGGACACCCTCGTGGAGACAGTGGTACAG | + |
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Preference number: 2 (lower is better) Translates to: PQETGSPREFRGLVG*GMEGRDTLVETVVQ Trigger: CTGTACCACTGTCTCCACGAGGGTGTCCCTGCCCTCCATCCCCAACCCCACCAGACCTCTAAACTCCCTAGGGCTTCCTGTCTCTTGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR CCA 90 bp | GGACACCTCAGTTCTACTTGGGAGGGAGAAGAACGCAACCAAGAGGGAGAGAGGGGGAGTTTAGAGGTCTaGTGGGGTTGGGGATGGAGG | + |
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Preference number: 2 (lower is better) Translates to: GHLSSTWEGEERNQEGERGSLEV*WGWGWR Trigger: CCTCCATCCCCAACCCCACCAGACCTCTAAACTCCC...CCTCTCTCCCTCTTGGTTGCGTTCTTCTCCCTCCCAAGTAGAACTGAGGTGTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR CCA 90 bp | GTATCTTCCACATCTATGAGACCCCTTAGAACTGCAGTTTCTCCAGGCCATGCGGCAGGGACACCCTCGTaGAGACAGTGGTACAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: VSSTSMRPLRTAVSPGHAAGTPS*RQWYRE Trigger: CTCCCTGTACCACTGTCTCCACGAGGGTGTCCCTGC...CGCATGGCCTGGAGAAACTGCAGTTCTAAGGGGTCTCATAGATGTGGAAGATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR CCA 90 bp | AATGTACCTAAACCTCAAGAGACAGGAAGCCCTAGGGAGTTTAGAGGTCTGGTGGCAGGGACACCCTCGTaGAGACAGTGGTACAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: NVPKPQETGSPREFRGLVAGTPS*RQWYRE Trigger: CTCCCTGTACCACTGTCTCCACGAGGGTGTCCCTGC...CACCAGACCTCTAAACTCCCTAGGGCTTCCTGTCTCTTGAGGTTTAGGTACATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGGGCTATCCCAACACCCAGAAATACCACTCTTGGGAATATACCCAAAAGCAGAGACCTGGGAGGTaGGAGACTCTCAGGACCCAA | + |
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Preference number: 2 (lower is better) Translates to: SQGYPNTQKYHSWEYTQKQRPGR*ETLRTQ Trigger: TTGGGTCCTGAGAGTCTCTCACCTCCCAGGTCTCTG...CTTTTGGGTATATTCCCAAGAGTGGTATTTCTGGGTGTTGGGATAGCCCTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR TCA 90 bp | GGACACCTCAGTTCTACTTGGGAGGGAGAAGAACGCAACCAAGAGGGAGAGAGGAAAGGACTAAAGCCCTaGGGGCCAGCAGAAAGAATA | + |
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Preference number: 2 (lower is better) Translates to: GHLSSTWEGEERNQEGERKGLKP*GPAERI Trigger: TATTCTTTCTGCTGGCCCTCAGGGCTTTAGTCCTTT...CCTCTCTCCCTCTTGGTTGCGTTCTTCTCCCTCCCAAGTAGAACTGAGGTGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR CCA 90 bp | CTACCCTTCTTCTACCTGTCTTCCTGTCCCTGTACCCCTCAACTATCCATTCTTCCCTCGTGGAGACAGTaGTACAGGGAGGAGTTATGG | + |
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Preference number: 2 (lower is better) Translates to: LPFFYLSSCPCTPQLSILPSWRQ*YREELW Trigger: CCATAACTCCTCCCTGTACCACTGTCTCCACGAGGG...AAGAATGGATAGTTGAGGGGTACAGGGACAGGAAGACAGGTAGAAGAAGGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR CCA 90 bp | GGACACCTCAGTTCTACTTGGGAGGGAGAAGAACGCAACCAAGAGGGAGAGAGGCTATTACTGAGGCTATaGGGCACTCACAAAAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: GHLSSTWEGEERNQEGERLLLRL*GTHKKG Trigger: TCCCTTTTTGTGAGTGCCCCATAGCCTCAGTAATAG...CCTCTCTCCCTCTTGGTTGCGTTCTTCTCCCTCCCAAGTAGAACTGAGGTGTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR CAA 90 bp | GTCCATACAGCAAAATCTTGCTGGTGTATGCAATGGTGTCGGCGTTaGGAGGCTGATTATGGGATGGATCCCTGGGTATGGCAGTCTCTA | + |
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Preference number: 2 (lower is better) Translates to: VHTAKSCWCMQWCRR*EADYGMDPWVWQSL Trigger: TAGAGACTGCCATACCCAGGGATCCATCCCATAATCAGCCTCCAAACGCCGACACCATTGCATACACCAGCAAGATTTTGCTGTATGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR TCA 90 bp | GGACACCTCAGTTCTACTTGGGAGGGAGAAGAACGCAACCAAGAGGGAGAGAGGGCAGCATATATCAACTaGTATGAAGCTCCCAACATA | + |
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Preference number: 2 (lower is better) Translates to: GHLSSTWEGEERNQEGERAAYIN*YEAPNI Trigger: TATGTTGGGAGCTTCATATCAGTTGATATATGCTGC...CCTCTCTCCCTCTTGGTTGCGTTCTTCTCCCTCCCAAGTAGAACTGAGGTGTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR TCA 90 bp | GAGAAGACTGAAGAAAAGAAGGTTCAGCAACATGCCCAAAGTGGGATCCAGCTCAAAGTTGGAAGGAGCTaGGGAGGAGAGAAACCCTGT | + |
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Preference number: 2 (lower is better) Translates to: EKTEEKKVQQHAQSGIQLKVGRS*GGEKPC Trigger: ACAGGGTTTCTCTCCTCCTCAGCTCCTTCCAACTTT...GAGCTGGATCCCACTTTGGGCATGTTGCTGAACCTTCTTTTCTTCAGTCTTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR CAA 90 bp | ACTTCTGTGTTTGGTAGGCCCCGGCATAGTCTCACAAGAGACAGTTaGAACAGGGTCCATACAGCAAAATCTTGCTGGTGTATGCAATGG | + |
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Preference number: 2 (lower is better) Translates to: TSVFGRPRHSLTRDS*NRVHTAKSCWCMQW Trigger: CCATTGCATACACCAGCAAGATTTTGCTGTATGGACCCTGTTCAAACTGTCTCTTGTGAGACTATGCCGGGGCCTACCAAACACAGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR TCA 90 bp | CTACCCTTCTTCTACCTGTCTTCCTGTCCCTGTACCCCTCAACTATCCATTCTTGCATCCGCAGCTGCTTaGAAAACAATGTTCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: LPFFYLSSCPCTPQLSILASAAA*KTMFRG Trigger: TCCTCTGAACATTGTTTTTCAAGCAGCTGCGGATGC...AAGAATGGATAGTTGAGGGGTACAGGGACAGGAAGACAGGTAGAAGAAGGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTCCAGGGGCTACTGGTTAGTTCATATAGTTGTTCCACCTATAGGGTTGAAGGAAGGTTCAGCAACATaGCCAAAGTGGGATCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: SSRGYWLVHIVVPPIGLKEGSAT*PKWDPA Trigger: AGCTGGATCCCACTTTGGGCATGTTGCTGAACCTTC...CTTCAACCCTATAGGTGGAACAACTATATGAACTAACCAGTAGCCCCTGGAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGGTATGGCAGTCTCTAGATAGTTCATCCTTTTGTCTCAGCTCCAAACTTGAAGGTTCAGCAACATaGCCAAAGTGGGATCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: PWVWQSLDSSSFCLSSKLEGSAT*PKWDPA Trigger: AGCTGGATCCCACTTTGGGCATGTTGCTGAACCTTC...AAGTTTGGAGCTGAGACAAAAGGATGAACTATCTAGAGACTGCCATACCCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR GCA 90 bp | GTATCTTCCACATCTATGAGACCCCTTAGAACTGCAGTTTCTCCAGGCCATGCGAATATACCCAAAAGATaGCTCACCATGCCACAAGGG | + |
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Preference number: 2 (lower is better) Translates to: VSSTSMRPLRTAVSPGHANIPKR*LTMPQG Trigger: CCCTTGTGGCATGGTGAGGCATCTTTTGGGTATATT...CGCATGGCCTGGAGAAACTGCAGTTCTAAGGGGTCTCATAGATGTGGAAGATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGGTATGGCAGTCTCTAGATAGTTCATCCTTTTGTCTCAGCTCCAAACTTAGTTTCTCCAGGCCATaGGCTTCTGCTCTGCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: PWVWQSLDSSSFCLSSKLSFSRP*ASALLF Trigger: GAAAAGCAGAGCAGAAGCGCATGGCCTGGAGAAACT...AAGTTTGGAGCTGAGACAAAAGGATGAACTATCTAGAGACTGCCATACCCAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCAGGGGCTACTGGTTAGTTCATATAGTTGTTCCACCTATAGGGTTGAAGGGAAATCTAAGAAGGTaGGAGGATGGGGGACTCTCA | + |
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Preference number: 2 (lower is better) Translates to: SSRGYWLVHIVVPPIGLKGNLRR*EDGGLS Trigger: TGAGAGTCCCCCATCCTCCCACCTTCTTAGATTTCC...CTTCAACCCTATAGGTGGAACAACTATATGAACTAACCAGTAGCCCCTGGAGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR CAA 90 bp | ATATATTTAGTCCCAGGGCTATCCCAACACCCAGAAATACCACTCTaGGGAATATACCCAAAAGATGCCTCACCATGCCACAAGGGCACA | + |
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Preference number: 2 (lower is better) Translates to: IYLVPGLSQHPEIPL*GIYPKDASPCHKGT Trigger: TGTGCCCTTGTGGCATGGTGAGGCATCTTTTGGGTATATTCCCAAGAGTGGTATTTCTGGGTGTTGGGATAGCCCTGGGACTAAATATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTGGGTATGGCAGTCTCTAGATAGTTCATCCTTTTGTCTCAGCTCCAAACTTGCATCCGCAGCTGCTTaGAAAACAATGTTCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: PWVWQSLDSSSFCLSSKLASAAA*KTMFRG Trigger: TCCTCTGAACATTGTTTTTCAAGCAGCTGCGGATGC...AAGTTTGGAGCTGAGACAAAAGGATGAACTATCTAGAGACTGCCATACCCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTGGGTATGGCAGTCTCTAGATAGTTCATCCTTTTGTCTCAGCTCCAAACTTTTACAGGAAGTGACCTaGGTGCTGACTCATTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: PWVWQSLDSSSFCLSSKLLQEVT*VLTHSL Trigger: CAAGGAATGAGTCAGCACTCAGGTCACTTCCTGTAA...AAGTTTGGAGCTGAGACAAAAGGATGAACTATCTAGAGACTGCCATACCCAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTCCAGGGGCTACTGGTTAGTTCATATAGTTGTTCCACCTATAGGGTTGAAGGAAACTCTACACAGTTaGTGGTGGGATGGCAAACTG | + |
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Preference number: 2 (lower is better) Translates to: SSRGYWLVHIVVPPIGLKETLHS*WWDGKL Trigger: CAGTTTGCCATCCCACCAGCAACTGTGTAGAGTTTC...CTTCAACCCTATAGGTGGAACAACTATATGAACTAACCAGTAGCCCCTGGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGGGCTATCCCAACACCCAGAAATACCACTCTTGGGAATATACCCAAAAGGGAATAGGAGGAGCATaGATAGGGAAGGGAATACAA | + |
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Preference number: 2 (lower is better) Translates to: SQGYPNTQKYHSWEYTQKGIGGA*IGKGIQ Trigger: TTGTATTCCCTTCCCTATCCATGCTCCTCCTATTCC...CTTTTGGGTATATTCCCAAGAGTGGTATTTCTGGGTGTTGGGATAGCCCTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAAGACTGAAGAAAAGAAGGTTCAGCAACATGCCCAAAGTGGGATCCAGCTCCTATTACTGAGGCTATaGGGCACTCACAAAAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: EKTEEKKVQQHAQSGIQLLLLRL*GTHKKG Trigger: TCCCTTTTTGTGAGTGCCCCATAGCCTCAGTAATAG...GAGCTGGATCCCACTTTGGGCATGTTGCTGAACCTTCTTTTCTTCAGTCTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTCCAGGGGCTACTGGTTAGTTCATATAGTTGTTCCACCTATAGGGTTGAAGGACCCAACAAGCAGCTaGAAAAGTCTGATGCAGATA | + |
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Preference number: 2 (lower is better) Translates to: SSRGYWLVHIVVPPIGLKDPTSS*KSLMQI Trigger: TATCTGCATCAGACTTTTTCAGCTGCTTGTTGGGTC...CTTCAACCCTATAGGTGGAACAACTATATGAACTAACCAGTAGCCCCTGGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR TCA 90 bp | CTACCCTTCTTCTACCTGTCTTCCTGTCCCTGTACCCCTCAACTATCCATTCTTGATAAAAATCTCAGGTaGCAGCAAGGATGTGTGCAA | + |
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Preference number: 2 (lower is better) Translates to: LPFFYLSSCPCTPQLSILDKNLR*QQGCVQ Trigger: TTGCACACATCCTTGCTGTCACCTGAGATTTTTATC...AAGAATGGATAGTTGAGGGGTACAGGGACAGGAAGACAGGTAGAAGAAGGGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAAGACTGAAGAAAAGAAGGTTCAGCAACATGCCCAAAGTGGGATCCAGCTCATGAGCATCCGCAGCTaGTTGAAAAACAATGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: EKTEEKKVQQHAQSGIQLMSIRS*LKNNVQ Trigger: CTGAACATTGTTTTTCAAGCAGCTGCGGATGCTCAT...GAGCTGGATCCCACTTTGGGCATGTTGCTGAACCTTCTTTTCTTCAGTCTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR GCA 90 bp | GTATCTTCCACATCTATGAGACCCCTTAGAACTGCAGTTTCTCCAGGCCATGCGTCTGATGCAGATATTTaGACCCATCCAATGGACAAA | + |
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Preference number: 2 (lower is better) Translates to: VSSTSMRPLRTAVSPGHASDADI*THPMDK Trigger: TTTGTCCATTGGATGGGTGCAAATATCTGCATCAGA...CGCATGGCCTGGAGAAACTGCAGTTCTAAGGGGTCTCATAGATGTGGAAGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTGGGTATGGCAGTCTCTAGATAGTTCATCCTTTTGTCTCAGCTCCAAACTTAATATACCCAAAAGATaGCTCACCATGCCACAAGGG | + |
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Preference number: 2 (lower is better) Translates to: PWVWQSLDSSSFCLSSKLNIPKR*LTMPQG Trigger: CCCTTGTGGCATGGTGAGGCATCTTTTGGGTATATT...AAGTTTGGAGCTGAGACAAAAGGATGAACTATCTAGAGACTGCCATACCCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR CCA 90 bp | AGCTCCAGGGGCTACTGGTTAGTTCATATAGTTGTTCCACCTATAGGGTTGAAGGGAATAGGAGGAGCATaGATAGGGAAGGGAATACAA | + |
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Preference number: 2 (lower is better) Translates to: SSRGYWLVHIVVPPIGLKGIGGA*IGKGIQ Trigger: TTGTATTCCCTTCCCTATCCATGCTCCTCCTATTCC...CTTCAACCCTATAGGTGGAACAACTATATGAACTAACCAGTAGCCCCTGGAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR CCA 90 bp | TCCCAGGGCTATCCCAACACCCAGAAATACCACTCTTGGGAATATACCCAAAAGAGGAGTTATGGGATATaGAATAGGAGGAGCATGGAT | + |
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Preference number: 2 (lower is better) Translates to: SQGYPNTQKYHSWEYTQKRSYGI*NRRSMD Trigger: ATCCATGCTCCTCCTATTCCATATCCCATAACTCCT...CTTTTGGGTATATTCCCAAGAGTGGTATTTCTGGGTGTTGGGATAGCCCTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR CCA 90 bp | CTACCCTTCTTCTACCTGTCTTCCTGTCCCTGTACCCCTCAACTATCCATTCTTGGTGGGATGGCAAACTaGTACAATTACTCTGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: LPFFYLSSCPCTPQLSILGGMAN*YNYSGN Trigger: ATTTCCAGAGTAATTGTACCAGTTTGCCATCCCACC...AAGAATGGATAGTTGAGGGGTACAGGGACAGGAAGACAGGTAGAAGAAGGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCAGGGCTATCCCAACACCCAGAAATACCACTCTTGGGAATATACCCAAAAGAAAAGTTCAACAAGCTaGAGTGTCCAAGTAAGGACA | + |
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Preference number: 2 (lower is better) Translates to: SQGYPNTQKYHSWEYTQKKSSTS*SVQVRT Trigger: TGTCCTTACTTGGACACTTCAGCTTGTTGAACTTTT...CTTTTGGGTATATTCCCAAGAGTGGTATTTCTGGGTGTTGGGATAGCCCTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR TCA 90 bp | CTACCCTTCTTCTACCTGTCTTCCTGTCCCTGTACCCCTCAACTATCCATTCTTAGGACTCAGTTAATATaGTTACATGCTGTGCACCTA | + |
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Preference number: 2 (lower is better) Translates to: LPFFYLSSCPCTPQLSILRTQLI*LHAVHL Trigger: TAGGTGCACAGCATGTAATCATATTAACTGAGTCCT...AAGAATGGATAGTTGAGGGGTACAGGGACAGGAAGACAGGTAGAAGAAGGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTCCAGGGGCTACTGGTTAGTTCATATAGTTGTTCCACCTATAGGGTTGAAGACCTTCCTTTTTATCTaGCCAATCGTCAGCTTTCCT | + |
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Preference number: 2 (lower is better) Translates to: SSRGYWLVHIVVPPIGLKTFLFI*PIVSFP Trigger: AGGAAAGCTGACGATTGGGCAGATAAAAAGGAAGGT...CTTCAACCCTATAGGTGGAACAACTATATGAACTAACCAGTAGCCCCTGGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTCCAGGGGCTACTGGTTAGTTCATATAGTTGTTCCACCTATAGGGTTGAAGAGGTGTTGCAGTAAATaGCCCAGTAATGAAAACAGG | + |
|
Preference number: 2 (lower is better) Translates to: SSRGYWLVHIVVPPIGLKRCCSK*PSNENR Trigger: CCTGTTTTCATTACTGGGGCATTTACTGCAACACCT...CTTCAACCCTATAGGTGGAACAACTATATGAACTAACCAGTAGCCCCTGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR-3UTR CCA 90 bp | TCCCAGGGCTATCCCAACACCCAGAAATACCACTCTTGGGAATATACCCAAAAGCCCACAACAGAAACATaGATACAGAAAATGTGGTTC | + |
|
Preference number: 2 (lower is better) Translates to: SQGYPNTQKYHSWEYTQKPTTET*IQKMWF Trigger: GAACCACATTTTCTGTATCCATGTTTCTGTTGTGGG...CTTTTGGGTATATTCCCAAGAGTGGTATTTCTGGGTGTTGGGATAGCCCTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CAA 90 bp | GTCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCTATGGGTGTTTaGTTCCCAATTCTAAGAAGGGGCAAAGTATCAACACGTTGGTCT | + |
|
Preference number: 2 (lower is better) Translates to: VSAPNFVSVTPSMGV*FPILRRGKVSTRWS Trigger: AGACCAACGTGTTGATACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATAGAAGGAGTTACAGAGACAAAGTTTGGAGCTGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCTCCAGGGGCTACTGGTTAGTTCATATAGTTGTTCCACCTATAGGGTTGAAGAGGACTCAGTTAATATaGTTACATGCTGTGCACCTA | + |
|
Preference number: 2 (lower is better) Translates to: SSRGYWLVHIVVPPIGLKRTQLI*LHAVHL Trigger: TAGGTGCACAGCATGTAATCATATTAACTGAGTCCT...CTTCAACCCTATAGGTGGAACAACTATATGAACTAACCAGTAGCCCCTGGAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR-3UTR TCA 90 bp | CCCTGGGTATGGCAGTCTCTAGATAGTTCATCCTTTTGTCTCAGCTCCAAACTTAAATCAAAACAACCTTaGGACTCCCTCTTACACCAA | + |
|
Preference number: 2 (lower is better) Translates to: PWVWQSLDSSSFCLSSKLKSKQP*DSLLHQ Trigger: TTGGTGTAAGAGGGAGTCTCAAGGTTGTTTTGATTT...AAGTTTGGAGCTGAGACAAAAGGATGAACTATCTAGAGACTGCCATACCCAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR-3UTR GCA 90 bp | TCAGAGAAAATGTACCTAAACCTCAAGAGACAGGAAGCCCTAGGGAGTTTAGAGATGAGCATCCGCAGCTaGTTGAAAAACAATGTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SEKMYLNLKRQEALGSLEMSIRS*LKNNVQ Trigger: CTGAACATTGTTTTTCAAGCAGCTGCGGATGCTCAT...CTCTAAACTCCCTAGGGCTTCCTGTCTCTTGAGGTTTAGGTACATTTTCTCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR-3UTR GCA 90 bp | CTACCCTTCTTCTACCTGTCTTCCTGTCCCTGTACCCCTCAACTATCCATTCTTGTTAATATGATTACATaGTGTGCACCTAGAATGGAC | + |
|
Preference number: 2 (lower is better) Translates to: LPFFYLSSCPCTPQLSILVNMIT*CAPRMD Trigger: GTCCATTCTAGGTGCACAGCATGTAATCATATTAAC...AAGAATGGATAGTTGAGGGGTACAGGGACAGGAAGACAGGTAGAAGAAGGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTGGAATACTACTCAGCTATTAAGAATGATGACATCCTGAGTTTTGAAGGCAAAGGACTAAAGCCCTaGGGGCCAGCAGAAAGAATA | + |
|
Preference number: 2 (lower is better) Translates to: TVEYYSAIKNDDILSFEGKGLKP*GPAERI Trigger: TATTCTTTCTGCTGGCCCTCAGGGCTTTAGTCCTTT...GCCTTCAAAACTCAGGATGTCATCATTCTTAATAGCTGAGTAGTATTCCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAGTGGAATACTACTCAGCTATTAAGAATGATGACATCCTGAGTTTTGAAGGCGAGGGAACTTATAGATaGCCACCTCCAACAGGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: TVEYYSAIKNDDILSFEGEGTYR*PPPTGR Trigger: TCTTCCTGTTGGAGGTGGGCATCTATAAGTTCCCTC...GCCTTCAAAACTCAGGATGTCATCATTCTTAATAGCTGAGTAGTATTCCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR-3UTR GCA 90 bp | AGCTCCAGGGGCTACTGGTTAGTTCATATAGTTGTTCCACCTATAGGGTTGAAGCTTGATCTTAGAGTATaGACCATTGGCTTCTTTAAG | + |
|
Preference number: 2 (lower is better) Translates to: SSRGYWLVHIVVPPIGLKLDLRV*TIGFFK Trigger: CTTAAAGAAGCCAATGGTGCATACTCTAAGATCAAG...CTTCAACCCTATAGGTGGAACAACTATATGAACTAACCAGTAGCCCCTGGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCTCCAGGGGCTACTGGTTAGTTCATATAGTTGTTCCACCTATAGGGTTGAAGCTGGTACAATTACTCTaGAAATCAATCTGGAGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SSRGYWLVHIVVPPIGLKLVQLL*KSIWSL Trigger: CAAACTCCAGATTGATTTCCAGAGTAATTGTACCAG...CTTCAACCCTATAGGTGGAACAACTATATGAACTAACCAGTAGCCCCTGGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTGGAATACTACTCAGCTATTAAGAATGATGACATCCTGAGTTTTGAAGGCGACCCAACAAGCAGCTaGAAAAGTCTGATGCAGATA | + |
|
Preference number: 2 (lower is better) Translates to: TVEYYSAIKNDDILSFEGDPTSS*KSLMQI Trigger: TATCTGCATCAGACTTTTTCAGCTGCTTGTTGGGTC...GCCTTCAAAACTCAGGATGTCATCATTCTTAATAGCTGAGTAGTATTCCACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CAA 90 bp | CTTCCACAGCTCAGTTCTTTTCACCTTAGTCCCTCACTCTTCTCTTaGTCCTCAGTACTTAAACATCTTTCAGAATATGTGATCACAAGT | + |
|
Preference number: 2 (lower is better) Translates to: LPQLSSFHLSPSLFS*SSVLKHLSEYVITS Trigger: ACTTGTGATCACATATTCTGAAAGATGTTTAAGTACTGAGGACAAAGAGAAGAGTGAGGGACTAAGGTGAAAAGAACTGAGCTGTGGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAGTGGAATACTACTCAGCTATTAAGAATGATGACATCCTGAGTTTTGAAGGCAGGAGTTATGGGATATaGAATAGGAGGAGCATGGAT | + |
|
Preference number: 2 (lower is better) Translates to: TVEYYSAIKNDDILSFEGRSYGI*NRRSMD Trigger: ATCCATGCTCCTCCTATTCCATATCCCATAACTCCT...GCCTTCAAAACTCAGGATGTCATCATTCTTAATAGCTGAGTAGTATTCCACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTGGAATACTACTCAGCTATTAAGAATGATGACATCCTGAGTTTTGAAGGCGCAGCATATATCAACTaGTATGAAGCTCCCAACATA | + |
|
Preference number: 2 (lower is better) Translates to: TVEYYSAIKNDDILSFEGAAYIN*YEAPNI Trigger: TATGTTGGGAGCTTCATATCAGTTGATATATGCTGC...GCCTTCAAAACTCAGGATGTCATCATTCTTAATAGCTGAGTAGTATTCCACTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CAA 90 bp | ATTCTAAGAAGGGGCAAAGTATCAACACGTTGGTCTTTGTTCTTCTaGAGTTTCATGTGTTTTGCAAATTGTACCTCATATCTTGGGTAT | + |
|
Preference number: 2 (lower is better) Translates to: ILRRGKVSTRWSLFF*SFMCFANCTSYLGY Trigger: ATACCCAAGATATGAGGTACAATTTGCAAAACACATGAAACTCAAGAAGAACAAAGACCAACGTGTTGATACTTTGCCCCTTCTTAGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CCA 72 bp | AAGAGACAGGAAGCCCTAGGGAGTTTAGAGGTCTGGTaGGGTTGGGGATGGAGGGCAGGGACACCCTCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: KRQEALGSLEVW*GWGWRAGTPSW Trigger: CCACGAGGGTGTCCCTGCCCTCCATCCCCAACCCCACCAGACCTCTAAACTCCCTAGGGCTTCCTGTCTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CCA 72 bp | TGGTGGGGTTGGGGATGGAGGGCAGGGACACCCTCGTaGAGACAGTGGTACAGGGAGGAGTTATGGGATATG | + |
|
Preference number: 3 (lower is better) Translates to: WWGWGWRAGTPS*RQWYREELWDM Trigger: CATATCCCATAACTCCTCCCTGTACCACTGTCTCCACGAGGGTGTCCCTGCCCTCCATCCCCAACCCCACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTGGGTATGGCAGTCTCTAGATAGTTCATCCTTTTGTCTCAGCTCCAAACTTAGAGGTCTGGTGGGGTaGGGGATGGAGGGCAGGGAC | + |
|
Preference number: 3 (lower is better) Translates to: PWVWQSLDSSSFCLSSKLRGLVG*GMEGRD Trigger: GTCCCTGCCCTCCATCCCCAACCCCACCAGACCTCT...AAGTTTGGAGCTGAGACAAAAGGATGAACTATCTAGAGACTGCCATACCCAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACACCTCAGTTCTACTTGGGAGGGAGAAGAACGCAACCAAGAGGGAGAGAGGAGCATCCGCAGCTGCTaGAAAAACAATGTTCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: GHLSSTWEGEERNQEGERSIRSC*KNNVQR Trigger: CCTCTGAACATTGTTTTTCAAGCAGCTGCGGATGCT...CCTCTCTCCCTCTTGGTTGCGTTCTTCTCCCTCCCAAGTAGAACTGAGGTGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR TCA 72 bp | CCCATCCAATGGACAAAGGTTGCTAACCCCTGTGATTaGATTAGGGGAAAGTTGGAAGGAGCTGAGGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PIQWTKVANPCD*IRGKLEGAEEE Trigger: CTCCTCCTCAGCTCCTTCCAACTTTCCCCTAATTCAATCACAGGGGTTAGCAACCTTTGTCCATTGGATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CCA 72 bp | TCCCAGGGCTATCCCAACACCCAGAAATACCACTCTTaGGAATATACCCAAAAGATGCCTCACCATGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: SQGYPNTQKYHS*EYTQKMPHHAT Trigger: TGTGGCATGGTGAGGCATCTTTTGGGTATATTCCCAAGAGTGGTATTTCTGGGTGTTGGGATAGCCCTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR TCA 72 bp | TTGGTAGGCCCCGGCATAGTCTCACAAGAGACAGTTTaGACAGGGTCCATACAGCAAAATCTTGCTGGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: LVGPGIVSQETV*TGSIQQNLAGV Trigger: TACACCAGCAAGATTTTGCTGTATGGACCCTGTTCAAACTGTCTCTTGTGAGACTATGCCGGGGCCTACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CCA 72 bp | CGTTTGGAGGCTGATTATGGGATGGATCCCTGGGTATaGCAGTCTCTAGATAGTTCATCCTTTTGTCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: RLEADYGMDPWV*QSLDSSSFCLS Trigger: GCTGAGACAAAAGGATGAACTATCTAGAGACTGCCATACCCAGGGATCCATCCCATAATCAGCCTCCAAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CCA 72 bp | TGTCGGCGTTTGGAGGCTGATTATGGGATGGATCCCTaGGTATGGCAGTCTCTAGATAGTTCATCCTTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: CRRLEADYGMDP*VWQSLDSSSFC Trigger: ACAAAAGGATGAACTATCTAGAGACTGCCATACCCAGGGATCCATCCCATAATCAGCCTCCAAACGCCGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CCA 72 bp | AGGGTCCATACAGCAAAATCTTGCTGGTGTATGCAATaGTGTCGGCGTTTGGAGGCTGATTATGGGATGGAT | + |
|
Preference number: 3 (lower is better) Translates to: RVHTAKSCWCMQ*CRRLEADYGMD Trigger: ATCCATCCCATAATCAGCCTCCAAACGCCGACACCATTGCATACACCAGCAAGATTTTGCTGTATGGACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR-3UTR CAA 90 bp | CTACCCTTCTTCTACCTGTCTTCCTGTCCCTGTACCCCTCAACTATCCATTCTTAGCATCCGCAGCTGCTaGAAAAACAATGTTCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: LPFFYLSSCPCTPQLSILSIRSC*KNNVQR Trigger: CCTCTGAACATTGTTTTTCAAGCAGCTGCGGATGCT...AAGAATGGATAGTTGAGGGGTACAGGGACAGGAAGACAGGTAGAAGAAGGGTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR-3UTR CAA 90 bp | CTACCCTTCTTCTACCTGTCTTCCTGTCCCTGTACCCCTCAACTATCCATTCTTGTTCCACCTATAGGGTaGAAGATCCCTTTAGCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: LPFFYLSSCPCTPQLSILVPPIG*KIPLAL Trigger: AAGAGCTAAAGGGATCTTCAACCCTATAGGTGGAAC...AAGAATGGATAGTTGAGGGGTACAGGGACAGGAAGACAGGTAGAAGAAGGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR TCA 72 bp | GTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGGATaGTGCCCTCCAGGTCCAAATCTCTCCTTTTGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VSSFVIGLPHSG*CPPGPNLSFCL Trigger: GAGACAAAAGGAGAGATTTGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAAGAACTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR GCA 72 bp | CCCAGAAATACCACTCTTGGGAATATACCCAAAAGATaGCTCACCATGCCACAAGGGCACATGTTCCACTAT | + |
|
Preference number: 3 (lower is better) Translates to: PRNTTLGNIPKR*LTMPQGHMFHY Trigger: ATAGTGGAACATGTGCCCTTGTGGCATGGTGAGGCATCTTTTGGGTATATTCCCAAGAGTGGTATTTCTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR-3UTR CAA 90 bp | TCCCAGGGCTATCCCAACACCCAGAAATACCACTCTTGGGAATATACCCAAAAGATGTTCATAGTAGCCTaGTTTGATATAGCCAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SQGYPNTQKYHSWEYTQKMFIVA*FDIARN Trigger: GTTCCTGGCTATATCAAACAAGGCTACTATGAACAT...CTTTTGGGTATATTCCCAAGAGTGGTATTTCTGGGTGTTGGGATAGCCCTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR TCA 72 bp | CCGCAGCTGCTTGAAAAACAATGTTCAGAGGAAGATTaGGCTATGCCATTATCCAGCTTTGCATGTCACATG | + |
|
Preference number: 3 (lower is better) Translates to: PQLLEKQCSEED*AMPLSSFACHM Trigger: CATGTGACATGCAAAGCTGGATAATGGCATAGCTCAATCTTCCTCTGAACATTGTTTTTCAAGCAGCTGCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CCA 72 bp | CAAGGATGTGTGCAAAGAGAAACTCTACACAGTTGCTaGTGGGATGGCAAACTGGTACAATTACTCTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QGCVQRETLHSC*WDGKLVQLLWK Trigger: TTTCCAGAGTAATTGTACCAGTTTGCCATCCCACCAGCAACTGTGTAGAGTTTCTCTTTGCACACATCCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR GCA 72 bp | ACAAAGATAAAAATCTCAGGTGACAGCAAGGATGTGTaGAAAGAGAAACTCTACACAGTTGCTGGTGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: TKIKISGDSKDV*KEKLYTVAGGM Trigger: CATCCCACCAGCAACTGTGTAGAGTTTCTCTTTGCACACATCCTTGCTGTCACCTGAGATTTTTATCTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR TCA 72 bp | TACACCAATCTGAACAACAAAGATAAAAATCTCAGGTaGCAGCAAGGATGTGTGCAAAGAGAAACTCTACAC | + |
|
Preference number: 3 (lower is better) Translates to: YTNLNNKDKNLR*QQGCVQRETLH Trigger: GTGTAGAGTTTCTCTTTGCACACATCCTTGCTGTCACCTGAGATTTTTATCTTTGTTGTTCAGATTGGTGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR TCA 72 bp | GGGGCAAAGTATCAACACGTTGGTCTTTGTTCTTCTTaGGTTTCATGTGTTTTGCAAATTGTACCTCATATC | + |
|
Preference number: 3 (lower is better) Translates to: GAKYQHVGLCSS*VSCVLQIVPHI Trigger: GATATGAGGTACAATTTGCAAAACACATGAAACTCAAGAAGAACAAAGACCAACGTGTTGATACTTTGCCCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR GCA 72 bp | CTTCTCCACACTTTCTACTTCACCTTCCTTTTTATCTaGCCAATCGTCAGCTTTCCTTTGTTTGAGAAATTA | + |
|
Preference number: 3 (lower is better) Translates to: LLHTFYFTFLFI*PIVSFPLFEKL Trigger: TAATTTCTCAAACAAAGGAAAGCTGACGATTGGGCAGATAAAAAGGAAGGTGAAGTAGAAAGTGTGGAGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR GCA 72 bp | CCTGCTCTGAAGTCACGACAATGTTCTTACTCTCAATaGCTTTTCTCTGAAAGCTATACTTATACTTCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: PALKSRQCSYSQ*LFSESYTYTSK Trigger: CTTAGAAGTATAAGTATAGCTTTCAGAGAAAAGGCATTGAGAGTAAGAACATTGTCGTGACTTCAGAGCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CCA 72 bp | AGATGCCCCACAACAGAAACATGGATACAGAAAATGTaGTTCATTTACACAGTGGAATACTACTCAGCTATT | + |
|
Preference number: 3 (lower is better) Translates to: RCPTTETWIQKM*FIYTVEYYSAI Trigger: AATAGCTGAGTAGTATTCCACTGTGTAAATGAACCACATTTTCTGTATCCATGTTTCTGTTGTGGGGCATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CCA 72 bp | TTCCCAATTCTAAGAAGGGGCAAAGTATCAACACGTTaGTCTTTGTTCTTCTTGAGTTTCATGTGTTTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: FPILRRGKVSTR*SLFFLSFMCFA Trigger: TGCAAAACACATGAAACTCAAGAAGAACAAAGACCAACGTGTTGATACTTTGCCCCTTCTTAGAATTGGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR TCA 72 bp | AAATGCCCCAGTAATGAAAACAGGACTCAGTTAATATaGTTACATGCTGTGCACCTAGAATGGACAAATCTA | + |
|
Preference number: 3 (lower is better) Translates to: KCPSNENRTQLI*LHAVHLEWTNL Trigger: TAGATTTGTCCATTCTAGGTGCACAGCATGTAATCATATTAACTGAGTCCTGTTTTCATTACTGGGGCATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR GCA 72 bp | CTGAAGTCCCATTTATCAATTCTTGATCTTAGAGTATaGACCATTGGCTTCTTTAAGGAAAAAGACATAGTC | + |
|
Preference number: 3 (lower is better) Translates to: LKSHLSILDLRV*TIGFFKEKDIV Trigger: GACTATGTCTTTTTCCTTAAAGAAGCCAATGGTGCATACTCTAAGATCAAGAATTGATAAATGGGACTTCAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CCA 72 bp | ATACTTACATATGACATGGAGCAAAAGACCAAGCACTaGTGCAGAAAGAATTCACTCATTCTAGATGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: ILTYDMEQKTKH*CRKNSLILDEK Trigger: TTTTTCATCTAGAATGAGTGAATTCTTTCTGCACCAGTGCTTGGTCTTTTGCTCCATGTCATATGTAAGTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CCA 72 bp | ATTAAGAATGATGACATCCTGAGTTTTGAAGGCAAATaGATGGAATTAGAAAATATCATCCTGAATGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: IKNDDILSFEGK*MELENIILNEG Trigger: ACCCTCATTCAGGATGATATTTTCTAATTCCATCCATTTGCCTTCAAAACTCAGGATGTCATCATTCTTAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CCA 72 bp | AAACATGGATACAGAAAATGTGGTTCATTTACACAGTaGAATACTACTCAGCTATTAAGAATGATGACATCC | + |
|
Preference number: 3 (lower is better) Translates to: KHGYRKCGSFTQ*NTTQLLRMMTS Trigger: GGATGTCATCATTCTTAATAGCTGAGTAGTATTCCACTGTGTAAATGAACCACATTTTCTGTATCCATGTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | GTATCTTCCACATCTATGAGACCCCTTAGAACTGCAGTTTCTCCAGGCCATGCGCCCCTTCCGAGTCCCTaGAGGACACACTTTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSSTSMRPLRTAVSPGHAPLPSP*RTHFCA Trigger: TGCACAAAAGTGTGTCCTCCAGGGACTCGGAAGGGG...CGCATGGCCTGGAGAAACTGCAGTTCTAAGGGGTCTCATAGATGTGGAAGATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR TCA 90 bp | AATGTACCTAAACCTCAAGAGACAGGAAGCCCTAGGGAGTTTAGAGGTCTGGTGCCAGAGACACCTGAATaGGGAAGCTCAGCTCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: NVPKPQETGSPREFRGLVPETPE*GSSALG Trigger: ACCGAGAGCTGAGCTTCCTCATTCAGGTGTCTCTGG...CACCAGACCTCTAAACTCCCTAGGGCTTCCTGTCTCTTGAGGTTTAGGTACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR TCA 90 bp | GAGACAGTGGTACAGGGAGGAGTTATGGGATATGGAATAGGAGGAGCATGGATACCAGAGACACCTGAATaGGGAAGCTCAGCTCTCGGT | + |
|
Preference number: 4 (lower is better) Translates to: ETVVQGGVMGYGIGGAWIPETPE*GSSALG Trigger: ACCGAGAGCTGAGCTTCCTCATTCAGGTGTCTCTGG...TATCCATGCTCCTCCTATTCCATATCCCATAACTCCTCCCTGTACCACTGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CAA 72 bp | TGTTCCACCTATAGGGTTGAAGATCCCTTTAGCTCTTaGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSTYRVEDPFSS*GTFSSSSIGGP Trigger: AGGGCCCCCAATGGAGGAGCTAGAGAAAGTACCCAAAGAGCTAAAGGGATCTTCAACCCTATAGGTGGAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR TCA 90 bp | GAGACAGTGGTACAGGGAGGAGTTATGGGATATGGAATAGGAGGAGCATGGATAATTCCCAGAGACACCTaGATGAGGAAGCTCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ETVVQGGVMGYGIGGAWIIPRDT*MRKLSS Trigger: AGAGCTGAGCTTCCTCATTCAGGTGTCTCTGGGAAT...TATCCATGCTCCTCCTATTCCATATCCCATAACTCCTCCCTGTACCACTGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CAA 72 bp | TTTGGTAGGCCCCGGCATAGTCTCACAAGAGACAGTTaGAACAGGGTCCATACAGCAAAATCTTGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FGRPRHSLTRDS*NRVHTAKSCWC Trigger: ACACCAGCAAGATTTTGCTGTATGGACCCTGTTCAAACTGTCTCTTGTGAGACTATGCCGGGGCCTACCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | AATGTACCTAAACCTCAAGAGACAGGAAGCCCTAGGGAGTTTAGAGGTCTGGTGAGCCCAGAGTGTGGTTaGGCAAAATATCCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NVPKPQETGSPREFRGLVSPECG*AKYPSS Trigger: AGAGGAAGGATATTTTGCCCAACCACACTCTGGGCT...CACCAGACCTCTAAACTCCCTAGGGCTTCCTGTCTCTTGAGGTTTAGGTACATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | GGACACCTCAGTTCTACTTGGGAGGGAGAAGAACGCAACCAAGAGGGAGAGAGGACTGGAATTTATCACTaGGTATTGTGCGTAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: GHLSSTWEGEERNQEGERTGIYH*VLCVEC Trigger: ACATTCTACGCACAATACCCAGTGATAAATTCCAGT...CCTCTCTCCCTCTTGGTTGCGTTCTTCTCCCTCCCAAGTAGAACTGAGGTGTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | AATGTACCTAAACCTCAAGAGACAGGAAGCCCTAGGGAGTTTAGAGGTCTGGTGATTGGCTTTCACCAATaGAGTGTGCCTGTGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: NVPKPQETGSPREFRGLVIGFHQ*SVPVDH Trigger: GTGATCCACAGGCACACTCCATTGGTGAAAGCCAAT...CACCAGACCTCTAAACTCCCTAGGGCTTCCTGTCTCTTGAGGTTTAGGTACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAGACTGAAGAAAAGAAGGTTCAGCAACATGCCCAAAGTGGGATCCAGCTCGCAGGACCAGTTGCATaGCTTGCCTATGAACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: EKTEEKKVQQHAQSGIQLAGPVA*LAYEQH Trigger: ATGTTGTTCATAGGCAAGCCATGCAACTGGTCCTGC...GAGCTGGATCCCACTTTGGGCATGTTGCTGAACCTTCTTTTCTTCAGTCTTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | AATGTACCTAAACCTCAAGAGACAGGAAGCCCTAGGGAGTTTAGAGGTCTGGTGGCAGGACCAGTTGCATaGCTTGCCTATGAACAACAT | + |
|
Preference number: 4 (lower is better) Translates to: NVPKPQETGSPREFRGLVAGPVA*LAYEQH Trigger: ATGTTGTTCATAGGCAAGCCATGCAACTGGTCCTGC...CACCAGACCTCTAAACTCCCTAGGGCTTCCTGTCTCTTGAGGTTTAGGTACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGGGCTATCCCAACACCCAGAAATACCACTCTTGGGAATATACCCAAAAGAAGCAACACAAAGGTTaGCACTCTCCATTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SQGYPNTQKYHSWEYTQKKQHKG*HSPFLP Trigger: GGGAAGAAATGGAGAGTGCCAACCTTTGTGTTGCTT...CTTTTGGGTATATTCCCAAGAGTGGTATTTCTGGGTGTTGGGATAGCCCTGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | GAGACAGTGGTACAGGGAGGAGTTATGGGATATGGAATAGGAGGAGCATGGATAAAGCAACACAAAGGTTaGCACTCTCCATTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: ETVVQGGVMGYGIGGAWIKQHKG*HSPFLP Trigger: GGGAAGAAATGGAGAGTGCCAACCTTTGTGTTGCTT...TATCCATGCTCCTCCTATTCCATATCCCATAACTCCTCCCTGTACCACTGTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | AATGTACCTAAACCTCAAGAGACAGGAAGCCCTAGGGAGTTTAGAGGTCTGGTGAATGGAGTGTGCCTGTaGATCACATACACAACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NVPKPQETGSPREFRGLVNGVCL*ITYTTV Trigger: CACTGTTGTGTATGTGATCCACAGGCACACTCCATT...CACCAGACCTCTAAACTCCCTAGGGCTTCCTGTCTCTTGAGGTTTAGGTACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | CTACCCTTCTTCTACCTGTCTTCCTGTCCCTGTACCCCTCAACTATCCATTCTTAATGGAGTGTGCCTGTaGATCACATACACAACAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LPFFYLSSCPCTPQLSILNGVCL*ITYTTV Trigger: CACTGTTGTGTATGTGATCCACAGGCACACTCCATT...AAGAATGGATAGTTGAGGGGTACAGGGACAGGAAGACAGGTAGAAGAAGGGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | GTATCTTCCACATCTATGAGACCCCTTAGAACTGCAGTTTCTCCAGGCCATGCGATCAGAGTCACTTGTTaGCATGGTCCTATAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSSTSMRPLRTAVSPGHAIRVTC*HGPIMN Trigger: GTTCATTATAGGACCATGCCAACAAGTGACTCTGAT...CGCATGGCCTGGAGAAACTGCAGTTCTAAGGGGTCTCATAGATGTGGAAGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | AATGTACCTAAACCTCAAGAGACAGGAAGCCCTAGGGAGTTTAGAGGTCTGGTGACGATGGCCTCAGACTaGAATTTATCACTGGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: NVPKPQETGSPREFRGLVTMASD*NLSLGI Trigger: AATACCCAGTGATAAATTCCAGTCTGAGGCCATCGT...CACCAGACCTCTAAACTCCCTAGGGCTTCCTGTCTCTTGAGGTTTAGGTACATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAGAAAATGTACCTAAACCTCAAGAGACAGGAAGCCCTAGGGAGTTTAGAGATTGGCTTTCACCAATaGAGTGTGCCTGTGGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SEKMYLNLKRQEALGSLEIGFHQ*SVPVDH Trigger: GTGATCCACAGGCACACTCCATTGGTGAAAGCCAAT...CTCTAAACTCCCTAGGGCTTCCTGTCTCTTGAGGTTTAGGTACATTTTCTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| 3UTR CAA 72 bp | ACAGCAAGGATGTGTGCAAAGAGAAACTCTACACAGTaGCTGGTGGGATGGCAAACTGGTACAATTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TARMCAKRNSTQ*LVGWQTGTITL Trigger: CAGAGTAATTGTACCAGTTTGCCATCCCACCAGCAACTGTGTAGAGTTTCTCTTTGCACACATCCTTGCTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR TCA 90 bp | TCCCAGGGCTATCCCAACACCCAGAAATACCACTCTTGGGAATATACCCAAAAGAAAAGATCTATCGCATaGGCCAAAAGATACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SQGYPNTQKYHSWEYTQKKRSIA*AKRYTA Trigger: AGCTGTGTATCTTTTGGCTCATGCGATAGATCTTTT...CTTTTGGGTATATTCCCAAGAGTGGTATTTCTGGGTGTTGGGATAGCCCTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR TCA 90 bp | CTACCCTTCTTCTACCTGTCTTCCTGTCCCTGTACCCCTCAACTATCCATTCTTAAAAGATCTATCGCATaGGCCAAAAGATACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPFFYLSSCPCTPQLSILKRSIA*AKRYTA Trigger: AGCTGTGTATCTTTTGGCTCATGCGATAGATCTTTT...AAGAATGGATAGTTGAGGGGTACAGGGACAGGAAGACAGGTAGAAGAAGGGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | GAGACAGTGGTACAGGGAGGAGTTATGGGATATGGAATAGGAGGAGCATGGATAATCAGAGTCACTTGTTaGCATGGTCCTATAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: ETVVQGGVMGYGIGGAWIIRVTC*HGPIMN Trigger: GTTCATTATAGGACCATGCCAACAAGTGACTCTGAT...TATCCATGCTCCTCCTATTCCATATCCCATAACTCCTCCCTGTACCACTGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCCAGGGGCTACTGGTTAGTTCATATAGTTGTTCCACCTATAGGGTTGAAGACGATGGCCTCAGACTaGAATTTATCACTGGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: SSRGYWLVHIVVPPIGLKTMASD*NLSLGI Trigger: AATACCCAGTGATAAATTCCAGTCTGAGGCCATCGT...CTTCAACCCTATAGGTGGAACAACTATATGAACTAACCAGTAGCCCCTGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | GAGACAGTGGTACAGGGAGGAGTTATGGGATATGGAATAGGAGGAGCATGGATAATATCCATCAGTACATaGGATGCAATCAAAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ETVVQGGVMGYGIGGAWIISIST*DAIKAA Trigger: TGCTGCTTTGATTGCATCCCATGTACTGATGGATAT...TATCCATGCTCCTCCTATTCCATATCCCATAACTCCTCCCTGTACCACTGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | CCCTGGGTATGGCAGTCTCTAGATAGTTCATCCTTTTGTCTCAGCTCCAAACTTGAATTCCACATGCTTTaGCACACACTTGTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PWVWQSLDSSSFCLSSKLEFHML*HTLVLL Trigger: GAGAAGAACAAGTGTGTGCCAAAGCATGTGGAATTC...AAGTTTGGAGCTGAGACAAAAGGATGAACTATCTAGAGACTGCCATACCCAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | GTATCTTCCACATCTATGAGACCCCTTAGAACTGCAGTTTCTCCAGGCCATGCGCAGTCTTTCCAAGAATaGAAGACAAACAAAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSSTSMRPLRTAVSPGHAQSFQE*KTNKGK Trigger: TTTGCCTTTGTTTGTCTTCCATTCTTGGAAAGACTG...CGCATGGCCTGGAGAAACTGCAGTTCTAAGGGGTCTCATAGATGTGGAAGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | AATGTACCTAAACCTCAAGAGACAGGAAGCCCTAGGGAGTTTAGAGGTCTGGTGTTCATAATAATTATCTaGCAGCTGGCGAGCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: NVPKPQETGSPREFRGLVFIIII*QLASHK Trigger: TTTGTGGCTCGCCAGCTGCCAGATAATTATTATGAA...CACCAGACCTCTAAACTCCCTAGGGCTTCCTGTCTCTTGAGGTTTAGGTACATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGGGCTATCCCAACACCCAGAAATACCACTCTTGGGAATATACCCAAAAGTTCATAATAATTATCTaGCAGCTGGCGAGCCACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQGYPNTQKYHSWEYTQKFIIII*QLASHK Trigger: TTTGTGGCTCGCCAGCTGCCAGATAATTATTATGAA...CTTTTGGGTATATTCCCAAGAGTGGTATTTCTGGGTGTTGGGATAGCCCTGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | CTACCCTTCTTCTACCTGTCTTCCTGTCCCTGTACCCCTCAACTATCCATTCTTCAGTCTTTCCAAGAATaGAAGACAAACAAAGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LPFFYLSSCPCTPQLSILQSFQE*KTNKGK Trigger: TTTGCCTTTGTTTGTCTTCCATTCTTGGAAAGACTG...AAGAATGGATAGTTGAGGGGTACAGGGACAGGAAGACAGGTAGAAGAAGGGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | CTACCCTTCTTCTACCTGTCTTCCTGTCCCTGTACCCCTCAACTATCCATTCTTCCGATAACAACAGAATaGTTTTCAGCTTCTACATAT | + |
|
Preference number: 4 (lower is better) Translates to: LPFFYLSSCPCTPQLSILPITTE*FSASTY Trigger: ATATGTAGAAGCTGAAAACCATTCTGTTGTTATCGG...AAGAATGGATAGTTGAGGGGTACAGGGACAGGAAGACAGGTAGAAGAAGGGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | TCCCAGGGCTATCCCAACACCCAGAAATACCACTCTTGGGAATATACCCAAAAGCCGATAACAACAGAATaGTTTTCAGCTTCTACATAT | + |
|
Preference number: 4 (lower is better) Translates to: SQGYPNTQKYHSWEYTQKPITTE*FSASTY Trigger: ATATGTAGAAGCTGAAAACCATTCTGTTGTTATCGG...CTTTTGGGTATATTCCCAAGAGTGGTATTTCTGGGTGTTGGGATAGCCCTGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | AATGTACCTAAACCTCAAGAGACAGGAAGCCCTAGGGAGTTTAGAGGTCTGGTGTGGTATAACACTTCTTaGTACTGCAAATCCAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: NVPKPQETGSPREFRGLVWYNTS*YCKSNS Trigger: ACTATTGGATTTGCAGTACCAAGAAGTGTTATACCA...CACCAGACCTCTAAACTCCCTAGGGCTTCCTGTCTCTTGAGGTTTAGGTACATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAGACTGAAGAAAAGAAGGTTCAGCAACATGCCCAAAGTGGGATCCAGCTCTGGTATAACACTTCTTaGTACTGCAAATCCAATAGT | + |
|
Preference number: 4 (lower is better) Translates to: EKTEEKKVQQHAQSGIQLWYNTS*YCKSNS Trigger: ACTATTGGATTTGCAGTACCAAGAAGTGTTATACCA...GAGCTGGATCCCACTTTGGGCATGTTGCTGAACCTTCTTTTCTTCAGTCTTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | TCAGAGAAAATGTACCTAAACCTCAAGAGACAGGAAGCCCTAGGGAGTTTAGAGATATCCATCAGTACATaGGATGCAATCAAAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SEKMYLNLKRQEALGSLEISIST*DAIKAA Trigger: TGCTGCTTTGATTGCATCCCATGTACTGATGGATAT...CTCTAAACTCCCTAGGGCTTCCTGTCTCTTGAGGTTTAGGTACATTTTCTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGAATACTACTCAGCTATTAAGAATGATGACATCCTGAGTTTTGAAGGCGAATTCCACATGCTTTaGCACACACTTGTTCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVEYYSAIKNDDILSFEGEFHML*HTLVLL Trigger: GAGAAGAACAAGTGTGTGCCAAAGCATGTGGAATTC...GCCTTCAAAACTCAGGATGTCATCATTCTTAATAGCTGAGTAGTATTCCACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGAATACTACTCAGCTATTAAGAATGATGACATCCTGAGTTTTGAAGGCACTGGAATTTATCACTaGGTATTGTGCGTAGAATGT | + |
|
Preference number: 4 (lower is better) Translates to: TVEYYSAIKNDDILSFEGTGIYH*VLCVEC Trigger: ACATTCTACGCACAATACCCAGTGATAAATTCCAGT...GCCTTCAAAACTCAGGATGTCATCATTCTTAATAGCTGAGTAGTATTCCACTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS TCA 90 bp | AACAGTGGACACCGTGGTGCTGTTAAGCTCACTGCTCACAGAAGCTaGGGTCAGCTGGATGCTCCTGTCAACAGTGGGGACTCTTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: NSGHRGAVKLTAHRS*GQLDAPVNSGDSST Trigger: GGTGGAAGAGTCCCCACTGTTGACAGGAGCATCCAGCTGACCTCAGCTTCTGTGAGCAGTGAGCTTAACAGCACCACGGTGTCCACTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
||
| CDS CCA 90 bp | CTGACACATATCCATCAGTACATGGGATGCAATCAAAGCAGCATATaGGCTGTCCCTGGTGAATCCCCTTCCGAGTCCCTGGAGGACACA | + |
|
Preference number: 5 (lower is better) Translates to: LTHIHQYMGCNQSSI*AVPGESPSESLEDT Trigger: TGTGTCCTCCAGGGACTCGGAAGGGGATTCACCAGGGACAGCCCATATGCTGCTTTGATTGCATCCCATGTACTGATGGATATGTGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
||
| CDS CCA 90 bp | AAGCTCAGCTCTCGGTCATTGGCTTTCACCAATGGAGTGTGCCTGTaGATCACATACACAACAGTGACTGCCAAGACCACAAGAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KLSSRSLAFTNGVCL*ITYTTVTAKTTRAP Trigger: TGGAGCTCTTGTGGTCTTGGCAGTCACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGAGAGCTGAGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
||
| CDS CCA 90 bp | CACCTGAATGAGGAAGCTCAGCTCTCGGTCATTGGCTTTCACCAATaGAGTGTGCCTGTGGATCACATACACAACAGTGACTGCCAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HLNEEAQLSVIGFHQ*SVPVDHIHNSDCQD Trigger: GTCTTGGCAGTCACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGAGAGCTGAGCTTCCTCATTCAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
||
| CDS-3UTR CAA 90 bp | GGACACCTCAGTTCTACTTGGGAGGGAGAAGAACGCAACCAAGAGGGAGAGAGGAAAGCAACACAAAGGTaGGCACTCTCCATTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: GHLSSTWEGEERNQEGERKATQR*ALSISS Trigger: GGAAGAAATGGAGAGTGCCAACCTTTGTGTTGCTTT...CCTCTCTCCCTCTTGGTTGCGTTCTTCTCCCTCCCAAGTAGAACTGAGGTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
||
| CDS GCA 90 bp | GCCTTTGACCTGGTTTCTCTGACACATATCCATCAGTACATGGGATaGAATCAAAGCAGCATATGGGCTGTCCCTGGTGAATCCCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AFDLVSLTHIHQYMG*NQSSIWAVPGESPS Trigger: GGAAGGGGATTCACCAGGGACAGCCCATATGCTGCTTTGATTGCATCCCATGTACTGATGGATATGTGTCAGAGAAACCAGGTCAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
||
| CDS GCA 90 bp | ATGAGGAAGCTCAGCTCTCGGTCATTGGCTTTCACCAATGGAGTGTaGCTGTGGATCACATACACAACAGTGACTGCCAAGACCACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: MRKLSSRSLAFTNGV*LWITYTTVTAKTTR Trigger: TCTTGTGGTCTTGGCAGTCACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGAGAGCTGAGCTTCCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
||
| CDS TCA 90 bp | CCTCCTGCCCTGTTAGAAACACTGAAGATGACTCCATTGCTTTGGTaGTGGAGAAACAGTTGTCAAAGATCTGGTAGCCCAGAGTGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: PPALLETLKMTPLLW*WRNSCQRSGSPECG Trigger: ACCACACTCTGGGCTACCAGATCTTTGACAACTGTTTCTCCATCACCAAAGCAATGGAGTCATCTTCAGTGTTTCTAACAGGGCAGGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
||
| CDS TCA 90 bp | CCTATGAACAACATGGATGATAGCACTGTGATTCCCAGAGACACCTaGATGAGGAAGCTCAGCTCTCGGTCATTGGCTTTCACCAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: PMNNMDDSTVIPRDT*MRKLSSRSLAFTNG Trigger: TCCATTGGTGAAAGCCAATGACCGAGAGCTGAGCTTCCTCATTCAGGTGTCTCTGGGAATCACAGTGCTATCATCCATGTTGTTCATAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
||
| CDS CCA 90 bp | CAAGGAATTCCACATGCTTTGGCACACACTTGTTCTTCTCCGCATTaGACCAGTCATTTTCCCCACATGGATCACAAAGCCTTTGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: QGIPHALAHTCSSPH*TSHFPHMDHKAFDL Trigger: CAGGTCAAAGGCTTTGTGATCCATGTGGGGAAAATGACTGGTCCAATGCGGAGAAGAACAAGTGTGTGCCAAAGCATGTGGAATTCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS TCA 90 bp | TCCGCATTGGACCAGTCATTTTCCCCACATGGATCACAAAGCCTTTaGCCTGGTTTCTCTGACACATATCCATCAGTACATGGGATGCAA | + |
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Preference number: 5 (lower is better) Translates to: SALDQSFSPHGSQSL*PGFSDTYPSVHGMQ Trigger: TTGCATCCCATGTACTGATGGATATGTGTCAGAGAAACCAGGTCAAAGGCTTTGTGATCCATGTGGGGAAAATGACTGGTCCAATGCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS-3UTR CAA 90 bp | CCCTGGGTATGGCAGTCTCTAGATAGTTCATCCTTTTGTCTCAGCTCCAAACTTAAAGCAACACAAAGGTaGGCACTCTCCATTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: PWVWQSLDSSSFCLSSKLKATQR*ALSISS Trigger: GGAAGAAATGGAGAGTGCCAACCTTTGTGTTGCTTT...AAGTTTGGAGCTGAGACAAAAGGATGAACTATCTAGAGACTGCCATACCCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| CDS GCA 90 bp | ATGATGAATCACTTCCAGCACAAAGGGGCTGAGGTCAATGTCAGTTaGATAAAGCACAATGACTTTGGCAGTGGAACTCTTTACTGCATC | + |
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Preference number: 5 (lower is better) Translates to: MMNHFQHKGAEVNVS*IKHNDFGSGTLYCI Trigger: GATGCAGTAAAGAGTTCCACTGCCAAAGTCATTGTGCTTTATGCAACTGACATTGACCTCAGCCCCTTTGTGCTGGAAGTGATTCATCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS GCA 90 bp | AGAAATTTTCCAGTGCTGTTTCTCCAGTTAGGTTTGTATTCCTCCTaGCCTGTTAGAAACACTGAAGATGACTCCATTGCTTTGGTGATG | + |
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Preference number: 5 (lower is better) Translates to: RNFPVLFLQLGLYSS*PVRNTEDDSIALVM Trigger: CATCACCAAAGCAATGGAGTCATCTTCAGTGTTTCTAACAGGGCAGGAGGAATACAAACCTAACTGGAGAAACAGCACTGGAAAATTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS TCA 90 bp | GACTGGAATTTATCACTGGGTATTGTGCGTAGAATGTATGGAAATTaGATATCATTACTAAAAATTGAGGAGGAAGAAGCATATCCCACC | + |
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Preference number: 5 (lower is better) Translates to: DWNLSLGIVRRMYGN*ISLLKIEEEEAYPT Trigger: GGTGGGATATGCTTCTTCCTCCTCAATTTTTAGTAATGATATTCAATTTCCATACATTCTACGCACAATACCCAGTGATAAATTCCAGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS CCA 72 bp | ATCCATCAGTACATGGGATGCAATCAAAGCAGCATATaGGCTGTCCCTGGTGAATCCCCTTCCGAGTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: IHQYMGCNQSSI*AVPGESPSESL Trigger: CAGGGACTCGGAAGGGGATTCACCAGGGACAGCCCATATGCTGCTTTGATTGCATCCCATGTACTGATGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS CAA 90 bp | GCTGTCCCTGGTGAATCCCCTTCCGAGTCCCTGGAGGACACACTTTaGTGCAGACTGAATCTGGAAGCCTTGAAGATTCAGTGTTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: AVPGESPSESLEDTL*CRLNLEALKIQCSK Trigger: TTTGGAACACTGAATCTTCAAGGCTTCCAGATTCAGTCTGCACAAAAGTGTGTCCTCCAGGGACTCGGAAGGGGATTCACCAGGGACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS GCA 72 bp | CTCAGCTCTCGGTCATTGGCTTTCACCAATGGAGTGTaGCTGTGGATCACATACACAACAGTGACTGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LSSRSLAFTNGV*LWITYTTVTAK Trigger: CTTGGCAGTCACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGAGAGCTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS CCA 72 bp | GAGGAAGCTCAGCTCTCGGTCATTGGCTTTCACCAATaGAGTGTGCCTGTGGATCACATACACAACAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: EEAQLSVIGFHQ*SVPVDHIHNSD Trigger: GTCACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGAGAGCTGAGCTTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS CCA 72 bp | TCTCGGTCATTGGCTTTCACCAATGGAGTGTGCCTGTaGATCACATACACAACAGTGACTGCCAAGACCACA | + |
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Preference number: 6 (lower is better) Translates to: SRSLAFTNGVCL*ITYTTVTAKTT Trigger: TGTGGTCTTGGCAGTCACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS TCA 72 bp | AACATGGATGATAGCACTGTGATTCCCAGAGACACCTaGATGAGGAAGCTCAGCTCTCGGTCATTGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: NMDDSTVIPRDT*MRKLSSRSLAF Trigger: GAAAGCCAATGACCGAGAGCTGAGCTTCCTCATTCAGGTGTCTCTGGGAATCACAGTGCTATCATCCATGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS CAA 72 bp | TCCACATGCTTTGGCACACACTTGTTCTTCTCCGCATaGGACCAGTCATTTTCCCCACATGGATCACAAAGC | + |
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Preference number: 6 (lower is better) Translates to: STCFGTHLFFSA*DQSFSPHGSQS Trigger: GCTTTGTGATCCATGTGGGGAAAATGACTGGTCCAATGCGGAGAAGAACAAGTGTGTGCCAAAGCATGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS TCA 72 bp | GCGGAAACCCCGGAAATTAAACCCCTCACACATGGGTaGTTCTATTTCCTCATCAGAGTCACTTGTTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: AETPEIKPLTHG*FYFLIRVTCWH Trigger: ATGCCAACAAGTGACTCTGATGAGGAAATAGAATCACCCATGTGTGAGGGGTTTAATTTCCGGGGTTTCCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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| CDS TCA 72 bp | TTCAGATCTTCCAGCTTCTCCTCTCCAGTGCAGAGCTaGTCAGACATGTCATACAGTCTGTCTTCTTTACCA | + |
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Preference number: 6 (lower is better) Translates to: FRSSSFSSPVQS*SDMSYSLSSLP Trigger: TGGTAAAGAAGACAGACTGTATGACATGTCTGATCAGCTCTGCACTGGAGAGGAGAAGCTGGAAGATCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS GCA 72 bp | AGGTACTTTTCAGATCTTCCAGCTTCTCCTCTCCAGTaGAGAGCTGATCAGACATGTCATACAGTCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: RYFSDLPASPLQ*RADQTCHTVCL Trigger: AAGACAGACTGTATGACATGTCTGATCAGCTCTGCACTGGAGAGGAGAAGCTGGAAGATCTGAAAAGTACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS CAA 90 bp | ATTGTAAGGCACAGTGCTGTTGGGCCAGGTACAGTTAAAAGCAGTTaGCCAGAATTCAATGGTCAAGACATCATTTGGATCCTTGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: IVRHSAVGPGTVKSS*PEFNGQDIIWILAR Trigger: CCTAGCAAGGATCCAAATGATGTCTTGACCATTGAATTCTGGCAAACTGCTTTTAACTGTACCTGGCCCAACAGCACTGTGCCTTACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS TCA 72 bp | CCCACATGGATCACAAAGCCTTTGACCTGGTTTCTCTaGCACATATCCATCAGTACATGGGATGCAATCAAA | + |
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Preference number: 6 (lower is better) Translates to: PTWITKPLTWFL*HISISTWDAIK Trigger: TTTGATTGCATCCCATGTACTGATGGATATGTGTCAGAGAAACCAGGTCAAAGGCTTTGTGATCCATGTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS TCA 72 bp | CTGTTAGAAACACTGAAGATGACTCCATTGCTTTGGTaGTGGAGAAACAGTTGTCAAAGATCTGGTAGCCCA | + |
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Preference number: 6 (lower is better) Translates to: LLETLKMTPLLW*WRNSCQRSGSP Trigger: TGGGCTACCAGATCTTTGACAACTGTTTCTCCATCACCAAAGCAATGGAGTCATCTTCAGTGTTTCTAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS CAA 90 bp | GAGTCCCTGGAGGACACACTTTTGTGCAGACTGAATCTGGAAGCCTaGAAGATTCAGTGTTCCAAAATAATGTTGAGTTCTTTGGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: ESLEDTLLCRLNLEA*KIQCSKIMLSSLEE Trigger: TTCTTCCAAAGAACTCAACATTATTTTGGAACACTGAATCTTCAAGGCTTCCAGATTCAGTCTGCACAAAAGTGTGTCCTCCAGGGACTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS CCA 72 bp | CCAAAGTGTCTAATTAGATTCACGATGGCCTCAGACTaGAATTTATCACTGGGTATTGTGCGTAGAATGTAT | + |
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Preference number: 6 (lower is better) Translates to: PKCLIRFTMASD*NLSLGIVRRMY Trigger: ATACATTCTACGCACAATACCCAGTGATAAATTCCAGTCTGAGGCCATCGTGAATCTAATTAGACACTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS CAA 72 bp | ATTAGAAATTTTCCAGTGCTGTTTCTCCAGTTAGGTTaGTATTCCTCCTGCCCTGTTAGAAACACTGAAGAT | + |
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Preference number: 6 (lower is better) Translates to: IRNFPVLFLQLG*YSSCPVRNTED Trigger: ATCTTCAGTGTTTCTAACAGGGCAGGAGGAATACAAACCTAACTGGAGAAACAGCACTGGAAAATTTCTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS CAA 72 bp | TCACGATGGCCTCAGACTGGAATTTATCACTGGGTATaGTGCGTAGAATGTATGGAAATTGAATATCATTAC | + |
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Preference number: 6 (lower is better) Translates to: SRWPQTGIYHWV*CVECMEIEYHY Trigger: GTAATGATATTCAATTTCCATACATTCTACGCACAATACCCAGTGATAAATTCCAGTCTGAGGCCATCGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000161972.10 ENSMUST00000168072.4 ENSMUST00000233255.2 |
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| CDS CAA 72 bp | TGGTTTTCAGCTTCTACATATCCAGTCAAATTAAATTaGCGCAACAACCTGCATGTAACATTCTGGTCAATA | + |
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Preference number: 6 (lower is better) Translates to: WFSASTYPVKLN*RNNLHVTFWSI Trigger: TATTGACCAGAATGTTACATGCAGGTTGTTGCGCAAATTTAATTTGACTGGATATGTAGAAGCTGAAAACCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000161972.10 ENSMUST00000233255.2 |
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