Pregenerated sensors for VMN2R68 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096861

Ensembl transcript IDs: ENSMUST00000061074.10

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CTGAGTCCTGGTCTGCAAGGCATACTACATATTGAGGGAAGAATCTaGTCCACATCTATCGCCCACTCCATCATTTCCTTAGACATATAT	+
Preference number: 5 (lower is better) Translates to: LSPGLQGILHIEGRI*STSIAHSIISLDIY Trigger: ATATATGTCTAAGGAAATGATGGAGTGGGCGATAGATGTGGATCAGATTCTTCCCTCAATATGTAGTATGCCTTGCAGACCAGGACTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS TCA 90 bp	CAGCTGAATCATGGTACATATGAGAATTATATATTTGGGTGCCCCTaGCACAAGCAGCCACCTCATTCTTCTTCCTGGAATGGTTATTTT	+
Preference number: 5 (lower is better) Translates to: QLNHGTYENYIFGCP*HKQPPHSSSWNGYF Trigger: AAAATAACCATTCCAGGAAGAAGAATGAGGTGGCTGCTTGTGTCAGGGGCACCCAAATATATAATTCTCATATGTACCATGATTCAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS TCA 90 bp	ACAAATGGAGGAGAAGTTCCCAGCCAAATTCCACAAAGAATCAGCTaGATCATGGTACATATGAGAATTATATATTTGGGTGCCCCTGAC	+
Preference number: 5 (lower is better) Translates to: TNGGEVPSQIPQRIS*IMVHMRIIYLGAPD Trigger: GTCAGGGGCACCCAAATATATAATTCTCATATGTACCATGATTCAGCTGATTCTTTGTGGAATTTGGCTGGGAACTTCTCCTCCATTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS TCA 90 bp	AGAAAATTTCATACTCTGTATCCTGTTTCAAATTCTGGTTCATGTTaGCTAGGTCTCCAGCAGGATTTACAAATTGTAAGGTCTTCAGAA	+
Preference number: 5 (lower is better) Translates to: RKFHTLYPVSNSGSC*LGLQQDLQIVRSSE Trigger: TTCTGAAGACCTTACAATTTGTAAATCCTGCTGGAGACCTAGTCAACATGAACCAGAATTTGAAACAGGATACAGAGTATGAAATTTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS GCA 72 bp	GTTGCAAACAATGATGATGTGGCCATGTACCATGTGTaGATCAGCATCAACAAATGGAGGAGAAGTTCCCAG	+
Preference number: 6 (lower is better) Translates to: VANNDDVAMYHV*ISINKWRRSSQ Trigger: CTGGGAACTTCTCCTCCATTTGTTGATGCTGATGCACACATGGTACATGGCCACATCATCATTGTTTGCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS TCA 72 bp	GGTCTGCAAGGCATACTACATATTGAGGGAAGAATCTaGTCCACATCTATCGCCCACTCCATCATTTCCTTA	+
Preference number: 6 (lower is better) Translates to: GLQGILHIEGRI*STSIAHSIISL Trigger: TAAGGAAATGATGGAGTGGGCGATAGATGTGGATCAGATTCTTCCCTCAATATGTAGTATGCCTTGCAGACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS TCA 72 bp	CCAGGTGTCAAATTCAAGTTCCTTCCCAGCATTATTTaGCCATGTGTCTACTTGTTGCAGAAGCATCTCATG	+
Preference number: 6 (lower is better) Translates to: PGVKFKFLPSII*PCVYLLQKHLM Trigger: CATGAGATGCTTCTGCAACAAGTAGACACATGGTCAAATAATGCTGGGAAGGAACTTGAATTTGACACCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS TCA 72 bp	AAGCAATCACAAAAGTGGTCTGCTGAAGGATACAGATaGCCGCAGTGGGATGACCAATGTAAAGTAATGAAC	+
Preference number: 6 (lower is better) Translates to: KQSQKWSAEGYR*PQWDDQCKVMN Trigger: GTTCATTACTTTACATTGGTCATCCCACTGCGGTCATCTGTATCCTTCAGCAGACCACTTTTGTGATTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS TCA 72 bp	CATGGTACATATGAGAATTATATATTTGGGTGCCCCTaGCACAAGCAGCCACCTCATTCTTCTTCCTGGAAT	+
Preference number: 6 (lower is better) Translates to: HGTYENYIFGCP*HKQPPHSSSWN Trigger: ATTCCAGGAAGAAGAATGAGGTGGCTGCTTGTGTCAGGGGCACCCAAATATATAATTCTCATATGTACCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS CCA 72 bp	TTTGACCATGTGTCTACTTGTTGCAGAAGCATCTCATaGAGTGAATGGGCCACAGCATGTATAGCATTGTAT	+
Preference number: 6 (lower is better) Translates to: FDHVSTCCRSIS*SEWATACIALY Trigger: ATACAATGCTATACATGCTGTGGCCCATTCACTCCATGAGATGCTTCTGCAACAAGTAGACACATGGTCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS CCA 72 bp	TTAGGGAAACCATCGCTAGTGGTAGAGATGTGTCCTTaGGAGATATCTGGTAAAGATGAGGAAATTGTTCAT	+
Preference number: 6 (lower is better) Translates to: LGKPSLVVEMCP*EISGKDEEIVH Trigger: ATGAACAATTTCCTCATCTTTACCAGATATCTCCCAAGGACACATCTCTACCACTAGCGATGGTTTCCCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS CAA 72 bp	TCCAGGTGTCAAATTCAAGTTCCTTCCCAGCATTATTaGACCATGTGTCTACTTGTTGCAGAAGCATCTCAT	+
Preference number: 6 (lower is better) Translates to: SRCQIQVPSQHY*TMCLLVAEASH Trigger: ATGAGATGCTTCTGCAACAAGTAGACACATGGTCAAATAATGCTGGGAAGGAACTTGAATTTGACACCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS CAA 90 bp	CCTGACACAAGCAGCCACCTCATTCTTCTTCCTGGAATGGTTATTTaGAATGCTAGTAGAACAGTAATTGTCTTAGCCAAGATAGTAGAG	+
Preference number: 6 (lower is better) Translates to: PDTSSHLILLPGMVI*NASRTVIVLAKIVE Trigger: CTCTACTATCTTGGCTAAGACAATTACTGTTCTACTAGCATTCAAAATAACCATTCCAGGAAGAAGAATGAGGTGGCTGCTTGTGTCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS CAA 90 bp	AAAACATCTTCCAGGTGTCAAATTCAAGTTCCTTCCCAGCATTATTaGACCATGTGTCTACTTGTTGCAGAAGCATCTCATGGAGTGAAT	+
Preference number: 6 (lower is better) Translates to: KTSSRCQIQVPSQHY*TMCLLVAEASHGVN Trigger: ATTCACTCCATGAGATGCTTCTGCAACAAGTAGACACATGGTCAAATAATGCTGGGAAGGAACTTGAATTTGACACCTGGAAGATGTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS CAA 90 bp	AGACACAACTTTTTGGAGGCAGAGAGTATGGTGTTCATTTGCATATaGATCTTCTCGACACTTCACACACTGATCCATGTTTGTCATGTT	+
Preference number: 6 (lower is better) Translates to: RHNFLEAESMVFICI*IFSTLHTLIHVCHV Trigger: AACATGACAAACATGGATCAGTGTGTGAAGTGTCGAGAAGATCAATATGCAAATGAACACCATACTCTCTGCCTCCAAAAAGTTGTGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS CAA 72 bp	ATTGATCTTCTCGACACTTCACACACTGATCCATGTTaGTCATGTTGGAAATTTCATTTTCAAGGCAGGGGT	+
Preference number: 6 (lower is better) Translates to: IDLLDTSHTDPC*SCWKFHFQGRG Trigger: ACCCCTGCCTTGAAAATGAAATTTCCAACATGACAAACATGGATCAGTGTGTGAAGTGTCGAGAAGATCAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS CAA 72 bp	AGCAGCCACCTCATTCTTCTTCCTGGAATGGTTATTTaGAATGCTAGTAGAACAGTAATTGTCTTAGCCAAG	+
Preference number: 6 (lower is better) Translates to: SSHLILLPGMVI*NASRTVIVLAK Trigger: CTTGGCTAAGACAATTACTGTTCTACTAGCATTCAAAATAACCATTCCAGGAAGAAGAATGAGGTGGCTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS CAA 90 bp	CATTTGCATATTGATCTTCTCGACACTTCACACACTGATCCATGTTaGTCATGTTGGAAATTTCATTTTCAAGGCAGGGGTTACAAACAA	+
Preference number: 6 (lower is better) Translates to: HLHIDLLDTSHTDPC*SCWKFHFQGRGYKQ Trigger: TTGTTTGTAACCCCTGCCTTGAAAATGAAATTTCCAACATGACAAACATGGATCAGTGTGTGAAGTGTCGAGAAGATCAATATGCAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061074.10
CDS TCA 72 bp	AAATTCCACAAAGAATCAGCTGAATCATGGTACATATaGGAATTATATATTTGGGTGCCCCTGACACAAGCA	+
Preference number: 6 (lower is better) Translates to: KFHKESAESWYI*ELYIWVPLTQA Trigger: TGCTTGTGTCAGGGGCACCCAAATATATAATTCTCATATGTACCATGATTCAGCTGATTCTTTGTGGAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061074.10