RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN2R66 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000094950

Ensembl transcript IDs: ENSMUST00000124773.3, ENSMUST00000232837.2, ENSMUST00000233111.2, ENSMUST00000233725.2, ENSMUST00000233739.2

Found 466 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGGGATGTTCTTCACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTaGTCTCTTATAGAACCCAAGACTGCCAGCCCAGAGATGGTCCCA +
Preference number: 1 (lower is better)
Translates to: GGMFFTGLLPLACSA*SLIEPKTASPEMVP
Trigger: TGGGACCATCTCTGGGCTGGCAGTCTTGGGTTCTATAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTGAAGAACATCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR TCA 90 bp GGGTGTTCCTTTCAACAAATGTATTCCTATGGAGCAGCTGGGAGATaGACCTATAGCAGGAACTCTCAGGATGTCAGTCTCAACACACCT +
Preference number: 1 (lower is better)
Translates to: GCSFQQMYSYGAAGR*TYSRNSQDVSLNTP
Trigger: AGGTGTGTTGAGACTGACATCCTGAGAGTTCCTGCTATAGGTTCATCTCCCAGCTGCTCCATAGGAATACATTTGTTGAAAGGAACACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR GCA 90 bp GTTTATTCGGCTTACATTTCCATACTGCTGTTGATCAGCAAAGGATaGAGGACTGGGACTCAAGCAGGTCAGAAATCAGGAGCTGATGCA +
Preference number: 1 (lower is better)
Translates to: VYSAYISILLLISKG*RTGTQAGQKSGADA
Trigger: TGCATCAGCTCCTGATTTCTGACCTGCTTGAGTCCCAGTCCTGCATCCTTTGCTGATCAACAGCAGTATGGAAATGTAAGCCGAATAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR GCA 90 bp AATTCCAGTTCCTTCCCAGCATTCATTGACCATGTGTCTACTTGTTaGAGAATCATCTCATGGAGTGAGAGGGCCACAGCATACACACCA +
Preference number: 1 (lower is better)
Translates to: NSSSFPAFIDHVSTC*RIISWSERATAYTP
Trigger: TGGTGTGTATGCTGTGGCCCTCTCACTCCATGAGATGATTCTGCAACAAGTAGACACATGGTCAATGAATGCTGGGAAGGAACTGGAATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR TCA 90 bp TGGTCATCATTGGTAACAATCGCTCCTATCCAGTTCCACCTGAAATaGACCACTAAGGACACCATGGCTAGTGGTAGAGATGTGTCCTTT +
Preference number: 1 (lower is better)
Translates to: WSSLVTIAPIQFHLK*TTKDTMASGRDVSF
Trigger: AAAGGACACATCTCTACCACTAGCCATGGTGTCCTTAGTGGTTCATTTCAGGTGGAACTGGATAGGAGCGATTGTTACCAATGATGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR CCA 90 bp TATGTGTGTTCTGTATCTGGGGTTAAGAATTATGTATGTCGGGGTTaGGGATTTAGCTCAGTCACCGAGTGCTTGCCTAGGAAGAACAAG +
Preference number: 1 (lower is better)
Translates to: YVCSVSGVKNYVCRG*GFSSVTECLPRKNK
Trigger: CTTGTTCTTCCTAGGCAAGCACTCGGTGACTGAGCTAAATCCCCAACCCCGACATACATAATTCTTAACCCCAGATACAGAACACACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CCA 90 bp GATTTAGCTCAGTCACCGAGTGCTTGCCTAGGAAGAACAAGGCCCTaGGTTTTGGTACTCAGCTTTGGAAAAATAGTTTACATATGTTGC +
Preference number: 1 (lower is better)
Translates to: DLAQSPSACLGRTRP*VLVLSFGKIVYICC
Trigger: GCAACATATGTAAACTATTTTTCCAAAGCTGAGTACCAAAACCCAGGGCCTTGTTCTTCCTAGGCAAGCACTCGGTGACTGAGCTAAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR GCA 90 bp AGCAGGCCCCTAGACAGACGTACTGGCAAAGTTCCAATTAAATTCTaGATTCACTCACAAGAAAACACAAAGCAACAGACCACACTAAGT +
Preference number: 1 (lower is better)
Translates to: SRPLDRRTGKVPIKF*IHSQENTKQQTTLS
Trigger: ACTTAGTGTGGTCTGTTGCTTTGTGTTTTCTTGTGAGTGAATGCAGAATTTAATTGGAACTTTGCCAGTACGTCTGTCTAGGGGCCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CCA 90 bp CTTAGCTTGATGTGTCGTTCTAAGTCCTGCAAACATACACACACTTaGGTAATTGAGATTATACAGTATGCACCATGCTCTCCCCATATT +
Preference number: 1 (lower is better)
Translates to: LSLMCRSKSCKHTHT*VIEIIQYAPCSPHI
Trigger: AATATGGGGAGAGCATGGTGCATACTGTATAATCTCAATTACCCAAGTGTGTGTATGTTTGCAGGACTTAGAACGACACATCAAGCTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CCA 90 bp TTTTTGGAGGCAGAGAGTTTGATCTTCATTGGCATATTGGTCCTCTaGACACTTCACACACTGATCCATGTTTGTCATGTTGGAAATTTC +
Preference number: 1 (lower is better)
Translates to: FLEAESLIFIGILVL*TLHTLIHVCHVGNF
Trigger: GAAATTTCCAACATGACAAACATGGATCAGTGTGTGAAGTGTCCAGAGGACCAATATGCCAATGAAGATCAAACTCTCTGCCTCCAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR GCA 90 bp TCACTCAGTTTCAAGCAGCTTAGCTTGATGTGTCGTTCTAAGTCCTaGAAACATACACACACTTGGGTAATTGAGATTATACAGTATGCA +
Preference number: 1 (lower is better)
Translates to: SLSFKQLSLMCRSKS*KHTHTWVIEIIQYA
Trigger: TGCATACTGTATAATCTCAATTACCCAAGTGTGTGTATGTTTGCAGGACTTAGAACGACACATCAAGCTAAGCTGCTTGAAACTGAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR TCA 90 bp AGTGGCAGAAAAAGTACTAAAGGGTTTAACATCCTTAGTCATCAGTaGAATGCTAATCAAAAAGATCTGACAATTCCACCTCACACCAAT +
Preference number: 1 (lower is better)
Translates to: SGRKSTKGFNILSHQ*NANQKDLTIPPHTN
Trigger: ATTGGTGTGAGGTGGAATTGTCAGATCTTTTTGATTAGCATTTCACTGATGACTAAGGATGTTAAACCCTTTAGTACTTTTTCTGCCACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR TCA 90 bp ATTTCAGAAAGTAGACTAACTCATCTTGTGAGGCCACAGTTACTTTaGTACTTAAACCACATAAAGACCCAGCAAAGAAAGAACTTCAGA +
Preference number: 1 (lower is better)
Translates to: ISESRLTHLVRPQLL*YLNHIKTQQRKNFR
Trigger: TCTGAAGTTCTTTCTTTGCTGGGTCTTTATGTGGTTTAAGTATCAAAGTAACTGTGGCCTCACAAGATGAGTTAGTCTACTTTCTGAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCAAGCACGGCTGTTCTCTaGGAGGTTCTACCAGCAGGT +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSSTAVL*EVLPAG
Trigger: ACCTGCTGGTAGAACCTCTCAGAGAACAGCCGTGCT...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCAAATACTCAAGAGACTTaGGGCCCTAGGGAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSNTQET*GPREGG
Trigger: TCCCCCTTCCCTAGGGCCTCAAGTCTCTTGAGTATT...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCACCTGCACAAACATCATaGCCAAGAAGCAGTTGGGGA +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSPAQTS*PRSSWG
Trigger: TCCCCAACTGCTTCTTGGTCATGATGTTTGTGCAGG...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCACTGGTGTGGCCTCAGTaGCTGAAGATGTGCCTAATA +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSLVWPQ*LKMCLI
Trigger: TATTAGGCACATCTTCAGCCACTGAGGCCACACCAG...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCATTTGCAGAGAGAGGGTaGTACCAGAATGGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSFAERG*YQNGRR
Trigger: CCTTCTCCCATTCTGGTACCACCCTCTCTCTGCAAA...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACAATACTCAAGAGACTTaGGGCCCTAGGGAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDNTQET*GPREGG
Trigger: TCCCCCTTCCCTAGGGCCTCAAGTCTCTTGAGTATT...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCAGGTTCTACCAGCAGGTaGCTGAAAGAGATGTACATC +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSGSTSR*LKEMYI
Trigger: GATGTACATCTCTTTCAGTCACCTGCTGGTAGAACC...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCATTGCTTCCCCTGGCTTaGTCAGCTTGCTCTCTTATA +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSLLPLA*SACSLI
Trigger: TATAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAA...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCAGGAAGAACAAGGCCCTaGGTTTTGGTACTCAGCTTT +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSGRTRP*VLVLSF
Trigger: AAAGCTGAGTACCAAAACCCAGGGCCTTGTTCTTCC...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTAGCACGGCTGTTCTCTaGGAGGTTCTACCAGCAGGT +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLISTAVL*EVLPAG
Trigger: ACCTGCTGGTAGAACCTCTCAGAGAACAGCCGTGCT...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCATGTGAGAGACTCTCATaGCTCAATGGGAGAACCTTA +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSCERLS*LNGRTL
Trigger: TAAGGTTCTCCCATTGAGTCATGAGAGTCTCTCACA...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACGAAGGAGTAAAAATGTaGAGCCTCCTTGGATGGGGC +
Preference number: 2 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDEGVKM*SLLGWG
Trigger: GCCCCATCCAAGGAGGCTGCACATTTTTACTCCTTC...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCACACCAAATTGTACTTTaGGGTGTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSHQIVL*GVCVCV
Trigger: CACACACACACACACACCCCAAAGTACAATTTGGTG...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACTTTGCAGAGAGAGGGTaGTACCAGAATGGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDFAERG*YQNGRR
Trigger: CCTTCTCCCATTCTGGTACCACCCTCTCTCTGCAAA...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCAGCACGGCTGTTCTCTaGGAGGTTCTACCAGCAGGT +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTSTAVL*EVLPAG
Trigger: ACCTGCTGGTAGAACCTCTCAGAGAACAGCCGTGCT...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTTCAGAAATCAGGAGCTaGTGCAGAAGCCATGGAGGG +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLISEIRS*CRSHGG
Trigger: CCCTCCATGGCTTCTGCATCAGCTCCTGATTTCTGA...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCAAAGTATCATCCTGTGTaGGGTAACTGTCTTAGTCAG +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSKYHPV*GNCLSQ
Trigger: CTGACTAAGACAGTTACCTCACACAGGATGATACTT...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCAATGGCATTGGTACAGTaGCAGACAGTTCAATCAACT +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSMALVQ*QTVQST
Trigger: AGTTGATTGAACTGTCTGTCACTGTACCAATGCCAT...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCATCTGACCCAGAACTATaGCTGTCTAAAGAACTGAAG +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSSDPEL*LSKELK
Trigger: CTTCAGTTCTTTAGACAGGCATAGTTCTGGGTCAGA...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACGGAAGAACAAGGCCCTaGGTTTTGGTACTCAGCTTT +
Preference number: 2 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDGRTRP*VLVLSF
Trigger: AAAGCTGAGTACCAAAACCCAGGGCCTTGTTCTTCC...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAGAGCACTGCCTGGTGTaGCCTCAGTGGCTGAAGATG +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGEHCLV*PQWLKM
Trigger: CATCTTCAGCCACTGAGGCCACACCAGGCAGTGCTC...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACACTGAGGGTAGAATCTaGTCTATACCTGTAGCCCAC +
Preference number: 2 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDTEGRI*SIPVAH
Trigger: GTGGGCTACAGGTATAGACCAGATTCTACCCTCAGT...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR CAA 90 bp CCAACTGAAGCTCCTTTCTCTGTGATAACTCCAGCTTGTATCAAGTaGACACACAAAATCGGCCAGTACAGTAACCTAGACCGAAAATGC +
Preference number: 2 (lower is better)
Translates to: PTEAPFSVITPACIK*THKIGQYSNLDRKC
Trigger: GCATTTTCGGTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CAA 90 bp AGTCAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCAGTaGGGGAGGAAAGGGTTTATTCGGCTTACATTTCCATACTGCTGT +
Preference number: 2 (lower is better)
Translates to: SQGFYSCTNIMTKKQ*GRKGFIRLTFPYCC
Trigger: ACAGCAGTATGGAAATGTAAGCCGAATAAACCCTTTCCTCCCCAACTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCAATACTCAAGAGACTTaGGGCCCTAGGGAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTNTQET*GPREGG
Trigger: TCCCCCTTCCCTAGGGCCTCAAGTCTCTTGAGTATT...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACACCCAACAATTGGATTaGAGACCAGCAGAATTAGGC +
Preference number: 2 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDTQQLD*RPAELG
Trigger: GCCTAATTCTGCTGGTCTTCAATCCAATTGTTGGGT...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTCTGGTGTGGCCTCAGTaGCTGAAGATGTGCCTAATA +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLILVWPQ*LKMCLI
Trigger: TATTAGGCACATCTTCAGCCACTGAGGCCACACCAG...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATGAGCACTGCCTGGTGTaGCCTCAGTGGCTGAAGATG +
Preference number: 2 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDEHCLV*PQWLKM
Trigger: CATCTTCAGCCACTGAGGCCACACCAGGCAGTGCTC...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTGAGCACTGCCTGGTGTaGCCTCAGTGGCTGAAGATG +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPEHCLV*PQWLKM
Trigger: CATCTTCAGCCACTGAGGCCACACCAGGCAGTGCTC...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGGAGCACTGCCTGGTGTaGCCTCAGTGGCTGAAGATG +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQEHCLV*PQWLKM
Trigger: CATCTTCAGCCACTGAGGCCACACCAGGCAGTGCTC...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTTTTGCAGAGAGAGGGTaGTACCAGAATGGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIFAERG*YQNGRR
Trigger: CCTTCTCCCATTCTGGTACCACCCTCTCTCTGCAAA...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CAA 90 bp AGAACAGCTTCCAAGAGTCAAATTCCAGTTCCTTCCCAGCATTCATaGACCATGTGTCTACTTGTTGCAGAATCATCTCATGGAGTGAGA +
Preference number: 2 (lower is better)
Translates to: RTASKSQIPVPSQHS*TMCLLVAESSHGVR
Trigger: TCTCACTCCATGAGATGATTCTGCAACAAGTAGACACATGGTCAATGAATGCTGGGAAGGAACTGGAATTTGACTCTTGGAAGCTGTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR TCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCAATGCTTTTCAGGGAATaGCCACTTAGGAAAATAACA +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSMLFRE*PLRKIT
Trigger: TGTTATTTTCCTAAGTGGTCATTCCCTGAAAAGCAT...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTAGCACGGCTGTTCTCTaGGAGGTTCTACCAGCAGGT +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPSTAVL*EVLPAG
Trigger: ACCTGCTGGTAGAACCTCTCAGAGAACAGCCGTGCT...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACAAATGGAGAAATTACTaGAGGCAAGAGTCTAGCACG +
Preference number: 2 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDKWRNY*RQESST
Trigger: CGTGCTAGACTCTTGCCTTCAGTAATTTCTCCATTT...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCCCTGCACAAACATCATaGCCAAGAAGCAGTTGGGGA +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTPAQTS*PRSSWG
Trigger: TCCCCAACTGCTTCTTGGTCATGATGTTTGTGCAGG...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCAGCTCAGTCACCGAGTaGTTGCCTAGGAAGAACAAG +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTSSVTE*LPRKNK
Trigger: CTTGTTCTTCCTAGGCAAGCACTCGGTGACTGAGCT...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCAAAAATAATCATGATTTaGAGAGAGAGGGTGGTACCA +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSKIIMI*RERVVP
Trigger: TGGTACCACCCTCTCTCTGCAAATCATGATTATTTT...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTAACCTAGACCGAAAATaGCAGCCATGGTCTGCACTT +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLINLDRK*QPWSAL
Trigger: AAGTGCAGACCATGGCTGGCATTTTCGGTCTAGGTT...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTTTGATCAGCAAAGGATaGAGGACTGGGACTCAAGCA +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLILISKG*RTGTQA
Trigger: TGCTTGAGTCCCAGTCCTGCATCCTTTGCTGATCAA...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCACTTATACCCAACAATTaGATTGAAGACCAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSLIPNN*IEDQQN
Trigger: ATTCTGCTGGTCTTCAATCCAATTGTTGGGTATAAG...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GTCCTTTCCTTCCTGAGGGGATTTTCTGAGTCCTGGTCTGCAAGGCATACTACATCCTGTTTCAAATTCTaGTTCATGATGACTAGTTCT +
Preference number: 2 (lower is better)
Translates to: VLSFLRGFSESWSARHTTSCFKF*FMMTSS
Trigger: AGAACTAGTCATCATGAACCAGAATTTGAAACAGGA...TGTAGTATGCCTTGCAGACCAGGACTCAGAAAATCCCCTCAGGAAGGAAAGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTAATACTCAAGAGACTTaGGGCCCTAGGGAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPNTQET*GPREGG
Trigger: TCCCCCTTCCCTAGGGCCTCAAGTCTCTTGAGTATT...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATAATACTCAAGAGACTTaGGGCCCTAGGGAAGGGGGA +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHNTQET*GPREGG
Trigger: TCCCCCTTCCCTAGGGCCTCAAGTCTCTTGAGTATT...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTTGTGAGAGACTCTCATaGCTCAATGGGAGAACCTTA +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLICERLS*LNGRTL
Trigger: TAAGGTTCTCCCATTGAGTCATGAGAGTCTCTCACA...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATTCAGAAATCAGGAGCTaGTGCAGAAGCCATGGAGGG +
Preference number: 2 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDSEIRS*CRSHGG
Trigger: CCCTCCATGGCTTCTGCATCAGCTCCTGATTTCTGA...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGTCAGAAATCAGGAGCTaGTGCAGAAGCCATGGAGGG +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQSEIRS*CRSHGG
Trigger: CCCTCCATGGCTTCTGCATCAGCTCCTGATTTCTGA...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTTCAGAAATCAGGAGCTaGTGCAGAAGCCATGGAGGG +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPSEIRS*CRSHGG
Trigger: CCCTCCATGGCTTCTGCATCAGCTCCTGATTTCTGA...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCCTACACATCACCACCTaGACTAATTCTGGAACCCTC +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTLHITT*TNSGTL
Trigger: GAGGGTTCCAGAATTAGTTCAGGTGGTGATGTGTAG...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTCAGTCTCAACACACCTaGAGACCACACCCTGTGAAC +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPQSQHT*RPHPVN
Trigger: GTTCACAGGGTGTGGTCTTCAGGTGTGTTGAGACTG...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAAATCATCTCATGGAGTaGGAGGGCCACAGCATACAC +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGNHLME*EGHSIH
Trigger: GTGTATGCTGTGGCCCTCTCACTCCATGAGATGATT...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR TCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTCCACAAAGAATCAGCTaGACCATGGTGCATATGAGA +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIPQRIS*TMVHMR
Trigger: TCTCATATGCACCATGGTTCAGCTGATTCTTTGTGG...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR TCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTCCAAGAAAGCTACAGTaGAACTTGCTAGAGCAATGG +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIPRKLQ*NLLEQW
Trigger: CCATTGCTCTAGCAAGTTTCACTGTAGCTTTCTTGG...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR GCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAAGCTCAGTCACCGAGTaGTTGCCTAGGAAGAACAAG +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGSSVTE*LPRKNK
Trigger: CTTGTTCTTCCTAGGCAAGCACTCGGTGACTGAGCT...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCAATTCCAATCTTTGTTTaGTTTTACCTATGCTATGGG +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSIPIFV*FYLCYG
Trigger: CCCATAGCATAGGTAAAAGCAAACAAAGATTGGAAT...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAGAAGGAGTAAAAATGTaGAGCCTCCTTGGATGGGGC +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGEGVKM*SLLGWG
Trigger: GCCCCATCCAAGGAGGCTGCACATTTTTACTCCTTC...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCTTGCTTCCCCTGGCTTaGTCAGCTTGCTCTCTTATA +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTLLPLA*SACSLI
Trigger: TATAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAA...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCTTGATCAGCAAAGGATaGAGGACTGGGACTCAAGCA +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTLISKG*RTGTQA
Trigger: TGCTTGAGTCCCAGTCCTGCATCCTTTGCTGATCAA...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACACTCTCATGACTCAATaGGAGAACCTTACCCAAAAT +
Preference number: 2 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDTLMTQ*ENLTQN
Trigger: ATTTTGGGTAAGGTTCTCCCATTGAGTCATGAGAGT...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATAGGGATGTTCTTCACTaGCTTGCTTCCCCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDRDVLH*LASPGL
Trigger: CAAGCCAGGGGAAGCAAGCCAGTGAAGAACATCCCT...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATAGGGATGTTCTTCACTaGCTTGCTTCCCCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHRDVLH*LASPGL
Trigger: CAAGCCAGGGGAAGCAAGCCAGTGAAGAACATCCCT...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGAGGGATGTTCTTCACTaGCTTGCTTCCCCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQRDVLH*LASPGL
Trigger: CAAGCCAGGGGAAGCAAGCCAGTGAAGAACATCCCT...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCAGTAATAAAGATCATATaGCATTGGTACAGTGACAGA +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSVIKII*HWYSDR
Trigger: TCTGTCACTGTACCAATGCCATATGATCTTTATTAC...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCAAATAAGATAGCACTTTaGGGCAAAAATGCAAAGAAG +
Preference number: 2 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSNKIAL*GKNAKK
Trigger: CTTCTTTGCATTTTTGCCCCAAAGTGCTATCTTATT...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR TCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAGGTTCTACCAGCAGGTaGCTGAAAGAGATGTACATC +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGGSTSR*LKEMYI
Trigger: GATGTACATCTCTTTCAGTCACCTGCTGGTAGAACC...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTAAATGGAGAAATTACTaGAGGCAAGAGTCTAGCACG +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIKWRNY*RQESST
Trigger: CGTGCTAGACTCTTGCCTTCAGTAATTTCTCCATTT...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCCCCTTGATCACTAATTaGGAAAATGCCTCACAGCTG +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTPLITN*ENASQL
Trigger: CAGCTGTGAGGCATTTTCTCAATTAGTGATCAAGGG...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAACCTGCACAAACATCATaGCCAAGAAGCAGTTGGGGA +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKPAQTS*PRSSWG
Trigger: TCCCCAACTGCTTCTTGGTCATGATGTTTGTGCAGG...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTCCTGCACAAACATCATaGCCAAGAAGCAGTTGGGGA +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPPAQTS*PRSSWG
Trigger: TCCCCAACTGCTTCTTGGTCATGATGTTTGTGCAGG...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCTCAAGCAGCTTAGCTTaGTGTGTCGTTCTAAGTCCT +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTSSSLA*CVVLSP
Trigger: AGGACTTAGAACGACACATCAAGCTAAGCTGCTTGA...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGAGCTCAGTCACCGAGTaGTTGCCTAGGAAGAACAAG +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQSSVTE*LPRKNK
Trigger: CTTGTTCTTCCTAGGCAAGCACTCGGTGACTGAGCT...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAAGAAGGAGTAAAAATGTaGAGCCTCCTTGGATGGGGC +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKEGVKM*SLLGWG
Trigger: GCCCCATCCAAGGAGGCTGCACATTTTTACTCCTTC...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTGAAGGAGTAAAAATGTaGAGCCTCCTTGGATGGGGC +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPEGVKM*SLLGWG
Trigger: GCCCCATCCAAGGAGGCTGCACATTTTTACTCCTTC...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACAAAATAATCATGATTTaGAGAGAGAGGGTGGTACCA +
Preference number: 2 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDKIIMI*RERVVP
Trigger: TGGTACCACCCTCTCTCTGCAAATCATGATTATTTT...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGATTGATCAGCAAAGGATaGAGGACTGGGACTCAAGCA +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGLISKG*RTGTQA
Trigger: TGCTTGAGTCCCAGTCCTGCATCCTTTGCTGATCAA...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGATGCAAAGCCAGCCAGTaGTTTTCCCAAAGGATCTCT +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGCKASQ*FSQRIS
Trigger: AGAGATCCTTTGGGAAAAGCACTGGCTGGCTTTGCA...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR CCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAGGAAGAACAAGGCCCTaGGTTTTGGTACTCAGCTTT +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGGRTRP*VLVLSF
Trigger: AAAGCTGAGTACCAAAACCCAGGGCCTTGTTCTTCC...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATCTGGTGTGGCCTCAGTaGCTGAAGATGTGCCTAATA +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHLVWPQ*LKMCLI
Trigger: TATTAGGCACATCTTCAGCCACTGAGGCCACACCAG...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAACTGGTGTGGCCTCAGTaGCTGAAGATGTGCCTAATA +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKLVWPQ*LKMCLI
Trigger: TATTAGGCACATCTTCAGCCACTGAGGCCACACCAG...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATTTTGCAGAGAGAGGGTaGTACCAGAATGGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDFAERG*YQNGRR
Trigger: CCTTCTCCCATTCTGGTACCACCCTCTCTCTGCAAA...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAATGCAGAATCATCTCATaGAGTGAGAGGGCCACAGCA +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKCRIIS*SERATA
Trigger: TGCTGTGGCCCTCTCACTCCATGAGATGATTCTGCA...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR TCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTTCTGACTACACACTTTaGTCCAATAAACTGAGATCC +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLISDYTL*SNKLRS
Trigger: GGATCTCAGTTTATTGGATCAAAGTGTGTAGTCAGA...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAACCCAACAATTGGATTaGAGACCAGCAGAATTAGGC +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGTQQLD*RPAELG
Trigger: GCCTAATTCTGCTGGTCTTCAATCCAATTGTTGGGT...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTGGTTCTACCAGCAGGTaGCTGAAAGAGATGTACATC +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPGSTSR*LKEMYI
Trigger: GATGTACATCTCTTTCAGTCACCTGCTGGTAGAACC...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGATGTGAGAGACTCTCATaGCTCAATGGGAGAACCTTA +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGCERLS*LNGRTL
Trigger: TAAGGTTCTCCCATTGAGTCATGAGAGTCTCTCACA...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGACCCTTGATCACTAATTaGGAAAATGCCTCACAGCTG +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGPLITN*ENASQL
Trigger: CAGCTGTGAGGCATTTTCTCAATTAGTGATCAAGGG...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGATTTCCATACTGCTGTTaGTCAGCAAAGGATGCAGGA +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGFPYCC*SAKDAG
Trigger: TCCTGCATCCTTTGCTGATCAACAGCAGTATGGAAA...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCAAGTATCATCCTGTGTaGGGTAACTGTCTTAGTCAG +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTKYHPV*GNCLSQ
Trigger: CTGACTAAGACAGTTACCTCACACAGGATGATACTT...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTCTAATCAAAAAGATCTaGCAATTCCACCTCACACCA +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLILIKKI*QFHLTP
Trigger: TGGTGTGAGGTGGAATTGTCAGATCTTTTTGATTAG...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTTGCTGCACTAATTGGTaGTCTGTAAGTGTAAGAATG +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLICCTNW*SVSVRM
Trigger: CATTCTTACACTTACAGATCACCAATTAGTGCAGCA...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTGTCAGCCTAGCAACATaGATTTTCCCACACCTTCCA +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPVSLAT*IFPHLP
Trigger: TGGAAGGTGTGGGAAAATTCATGTTGCTAGGCTGAC...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGGTCAGCCTAGCAACATaGATTTTCCCACACCTTCCA +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQVSLAT*IFPHLP
Trigger: TGGAAGGTGTGGGAAAATTCATGTTGCTAGGCTGAC...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGCAGTTCCACCTGAAATaGACCACTAAGGACACCATG +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQQFHLK*TTKDTM
Trigger: CATGGTGTCCTTAGTGGTTCATTTCAGGTGGAACTG...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR TCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTTTCAGGTTGCTGGTGTaGAAAAATGAAAGTCCCTAT +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIFRLLV*KNESPY
Trigger: ATAGGGACTTTCATTTTTTCACACCAGCAACCTGAA...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR TCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTTTCACTACTGTAGTTTaGAGGGTGTACTGTTTGGAT +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIFTTVV*RVYCLD
Trigger: ATCCAAACAGTACACCCTTCAAACTACAGTAGTGAA...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR TCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATATGTCCTTTCCTTCCTaGGGGGATTTTCTGAGTCCT +
Preference number: 2 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDMSFPS*GDFLSP
Trigger: AGGACTCAGAAAATCCCCTCAGGAAGGAAAGGACAT...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR GCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATAACCTAGACCGAAAATaGCAGCCATGGTCTGCACTT +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHNLDRK*QPWSAL
Trigger: AAGTGCAGACCATGGCTGGCATTTTCGGTCTAGGTT...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTTTGCTTCCCCTGGCTTaGTCAGCTTGCTCTCTTATA +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPLLPLA*SACSLI
Trigger: TATAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAA...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAATTGCTTCCCCTGGCTTaGTCAGCTTGCTCTCTTATA +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKLLPLA*SACSLI
Trigger: TATAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAA...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGTTGATCAGCAAAGGATaGAGGACTGGGACTCAAGCA +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQLISKG*RTGTQA
Trigger: TGCTTGAGTCCCAGTCCTGCATCCTTTGCTGATCAA...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATTTGATCAGCAAAGGATaGAGGACTGGGACTCAAGCA +
Preference number: 2 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDLISKG*RTGTQA
Trigger: TGCTTGAGTCCCAGTCCTGCATCCTTTGCTGATCAA...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGACTTTGGGGCAAAAATaGAAAGAAGCAGCCCTGCAC +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQTLGQK*KEAALH
Trigger: GTGCAGGGCTGCTTCTTTGCATTTTTGCCCCAAAGT...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR CCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATGGAAGAACAAGGCCCTaGGTTTTGGTACTCAGCTTT +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHGRTRP*VLVLSF
Trigger: AAAGCTGAGTACCAAAACCCAGGGCCTTGTTCTTCC...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTGGAAGAACAAGGCCCTaGGTTTTGGTACTCAGCTTT +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPGRTRP*VLVLSF
Trigger: AAAGCTGAGTACCAAAACCCAGGGCCTTGTTCTTCC...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGACACCAAATTGTACTTTaGGGTGTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGHQIVL*GVCVCV
Trigger: CACACACACACACACACCCCAAAGTACAATTTGGTG...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTACTCTCATGACTCAATaGGAGAACCTTACCCAAAAT +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLITLMTQ*ENLTQN
Trigger: ATTTTGGGTAAGGTTCTCCCATTGAGTCATGAGAGT...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTAAGATCATATGGCATTaGTACAGTGACAGACAGTTC +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIKIIWH*YSDRQF
Trigger: GAACTGTCTGTCACTGTACCAATGCCATATGATCTT...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCCTTATTAGCACCTCATaGAACCACTTCATCAGGGAA +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTLISTS*NHFIRE
Trigger: TTCCCTGATGAAGTGGTTCCATGAGGTGCTAATAAG...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTCACACCTTCCAGACATaGCTTAGCAGTTCCATGTTC +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPHTFQT*LSSSMF
Trigger: GAACATGGAACTGCTAAGCCATGTCTGGAAGGTGTG...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAGGATTTTCTGAGTCCTaGTCTGCAAGGCATACTACA +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGGFSES*SARHTT
Trigger: TGTAGTATGCCTTGCAGACCAGGACTCAGAAAATCC...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR TCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTTTTGATCCAATAAACTaGGATCCAGGTCATGTGTTA +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIFDPIN*DPGHVL
Trigger: TAACACATGACCTGGATCTCAGTTTATTGGATCAAA...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATACCCAACAATTGGATTaGAGACCAGCAGAATTAGGC +
Preference number: 2 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDTQQLD*RPAELG
Trigger: GCCTAATTCTGCTGGTCTTCAATCCAATTGTTGGGT...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATACCCAACAATTGGATTaGAGACCAGCAGAATTAGGC +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHTQQLD*RPAELG
Trigger: GCCTAATTCTGCTGGTCTTCAATCCAATTGTTGGGT...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAAAATGGAGAAATTACTaGAGGCAAGAGTCTAGCACG +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGKWRNY*RQESST
Trigger: CGTGCTAGACTCTTGCCTTCAGTAATTTCTCCATTT...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCGCCTGTCTAAAGAACTaGAGAGACAAAAATGGAGAA +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTACLKN*RDKNGE
Trigger: TTCTCCATTTTTGTCTCTTCAGTTCTTTAGACAGGC...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGTGTGAGAGACTCTCATaGCTCAATGGGAGAACCTTA +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQCERLS*LNGRTL
Trigger: TAAGGTTCTCCCATTGAGTCATGAGAGTCTCTCACA...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTCCCTTGATCACTAATTaGGAAAATGCCTCACAGCTG +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPPLITN*ENASQL
Trigger: CAGCTGTGAGGCATTTTCTCAATTAGTGATCAAGGG...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATCCCTTGATCACTAATTaGGAAAATGCCTCACAGCTG +
Preference number: 2 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDPLITN*ENASQL
Trigger: CAGCTGTGAGGCATTTTCTCAATTAGTGATCAAGGG...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATCCCTTGATCACTAATTaGGAAAATGCCTCACAGCTG +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHPLITN*ENASQL
Trigger: CAGCTGTGAGGCATTTTCTCAATTAGTGATCAAGGG...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATTTTCCATACTGCTGTTaGTCAGCAAAGGATGCAGGA +
Preference number: 2 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDFPYCC*SAKDAG
Trigger: TCCTGCATCCTTTGCTGATCAACAGCAGTATGGAAA...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAATTTCCATACTGCTGTTaGTCAGCAAAGGATGCAGGA +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKFPYCC*SAKDAG
Trigger: TCCTGCATCCTTTGCTGATCAACAGCAGTATGGAAA...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGTTTCCATACTGCTGTTaGTCAGCAAAGGATGCAGGA +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQFPYCC*SAKDAG
Trigger: TCCTGCATCCTTTGCTGATCAACAGCAGTATGGAAA...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCTGCTGCACTAATTGGTaGTCTGTAAGTGTAAGAATG +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTCCTNW*SVSVRM
Trigger: CATTCTTACACTTACAGATCACCAATTAGTGCAGCA...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAATGGCATTGGTACAGTaGCAGACAGTTCAATCAACT +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGMALVQ*QTVQST
Trigger: AGTTGATTGAACTGTCTGTCACTGTACCAATGCCAT...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGACAAACACAAAATTCCTaGTGTGCTATTTCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGQTQNS*CAISSG
Trigger: GCCTGAGGAAATAGCACATCAGGAATTTTGTGTTTG...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCACACACTTGGGTAATTaGGATTATACAGTATGCACC +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTTHLGN*DYTVCT
Trigger: GGTGCATACTGTATAATCTCAATTACCCAAGTGTGT...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGTCAAGCAGCTTAGCTTaGTGTGTCGTTCTAAGTCCT +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQSSSLA*CVVLSP
Trigger: AGGACTTAGAACGACACATCAAGCTAAGCTGCTTGA...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATAGAGCTTGGCTTCATTaGATGTATGAGGCAGATTCC +
Preference number: 2 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDRAWLH*MYEADS
Trigger: GGAATCTGCCTCATACATTCAATGAAGCCAAGCTCT...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR GCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGATCTGACCCAGAACTATaGCTGTCTAAAGAACTGAAG +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGSDPEL*LSKELK
Trigger: CTTCAGTTCTTTAGACAGGCATAGTTCTGGGTCAGA...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATCACCAAATTGTACTTTaGGGTGTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDHQIVL*GVCVCV
Trigger: CACACACACACACACACCCCAAAGTACAATTTGGTG...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAACACCAAATTGTACTTTaGGGTGTGTGTGTGTGTGTG +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKHQIVL*GVCVCV
Trigger: CACACACACACACACACCCCAAAGTACAATTTGGTG...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTCTTATACCCAACAATTaGATTGAAGACCAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLILIPNN*IEDQQN
Trigger: ATTCTGCTGGTCTTCAATCCAATTGTTGGGTATAAG...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGACTTATTAGCACCTCATaGAACCACTTCATCAGGGAA +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGLISTS*NHFIRE
Trigger: TTCCCTGATGAAGTGGTTCCATGAGGTGCTAATAAG...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATCCTCATTCTTCTTCCTaGAACAGTAGCCTTGAATGC +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHPHSSS*NSSLEC
Trigger: GCATTCAAGGCTACTGTTCCAGGAAGAAGAATGAGG...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR CAA 90 bp GTTGAGTGCACAGTTAATCTGATTGGAAAAGAGTTGGTATTATCCTaGAAAACTGAGCCACTATTTCAGGAAAGGTATGCCTATTATGGA +
Preference number: 2 (lower is better)
Translates to: VECTVNLIGKELVLS*KTEPLFQERYAYYG
Trigger: TCCATAATAGGCATACCTTTCCTGAAATAGTGGCTCAGTTTTCAAGGATAATACCAACTCTTTTCCAATCAGATTAACTGTGCACTCAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGATCTGACTACACACTTTaGTCCAATAAACTGAGATCC +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGSDYTL*SNKLRS
Trigger: GGATCTCAGTTTATTGGATCAAAGTGTGTAGTCAGA...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGAAATGGAGAAATTACTaGAGGCAAGAGTCTAGCACG +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQKWRNY*RQESST
Trigger: CGTGCTAGACTCTTGCCTTCAGTAATTTCTCCATTT...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATAAGTATCATCCTGTGTaGGGTAACTGTCTTAGTCAG +
Preference number: 2 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDKYHPV*GNCLSQ
Trigger: CTGACTAAGACAGTTACCTCACACAGGATGATACTT...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTAAGTATCATCCTGTGTaGGGTAACTGTCTTAGTCAG +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPKYHPV*GNCLSQ
Trigger: CTGACTAAGACAGTTACCTCACACAGGATGATACTT...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATAAGTATCATCCTGTGTaGGGTAACTGTCTTAGTCAG +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHKYHPV*GNCLSQ
Trigger: CTGACTAAGACAGTTACCTCACACAGGATGATACTT...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGACTAATCAAAAAGATCTaGCAATTCCACCTCACACCA +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGLIKKI*QFHLTP
Trigger: TGGTGTGAGGTGGAATTGTCAGATCTTTTTGATTAG...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGATGCTGCACTAATTGGTaGTCTGTAAGTGTAAGAATG +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGCCTNW*SVSVRM
Trigger: CATTCTTACACTTACAGATCACCAATTAGTGCAGCA...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATATGGCATTGGTACAGTaGCAGACAGTTCAATCAACT +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHMALVQ*QTVQST
Trigger: AGTTGATTGAACTGTCTGTCACTGTACCAATGCCAT...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAAATGGCATTGGTACAGTaGCAGACAGTTCAATCAACT +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKMALVQ*QTVQST
Trigger: AGTTGATTGAACTGTCTGTCACTGTACCAATGCCAT...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCAATCACATGATCATCTaGTCAGATTCTGAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTNHMII*SDSERV
Trigger: GACTCTTTCAGAATCTGATCAGATGATCATGTGATT...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCAGTGCACAGTTAATCTaGTTGGAAAAGAGTTGGTAT +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTSAQLI*LEKSWY
Trigger: ATACCAACTCTTTTCCAATCAGATTAACTGTGCACT...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATTTTGGTTATTGGCTTTaGCTATGGGAGTTTCTCGGT +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHFGYWL*LWEFLG
Trigger: ACCGAGAAACTCCCATAGTCAAAGCCAATAACCAAA...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTGTAGAAGGCAACCACTaGACCTTTGTTGCAAACAAT +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPVEGNH*TFVANN
Trigger: ATTGTTTGCAACAAAGGTTCAGTGGTTGCCTTCTAC...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR GCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATTCTGACCCAGAACTATaGCTGTCTAAAGAACTGAAG +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHSDPEL*LSKELK
Trigger: CTTCAGTTCTTTAGACAGGCATAGTTCTGGGTCAGA...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAATCTGACCCAGAACTATaGCTGTCTAAAGAACTGAAG +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKSDPEL*LSKELK
Trigger: CTTCAGTTCTTTAGACAGGCATAGTTCTGGGTCAGA...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAACAAAATTCCTGATGTaGTATTTCCTCAGGCATCTG +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGTKFLM*YFLRHL
Trigger: CAGATGCCTGAGGAAATAGCACATCAGGAATTTTGT...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCACAACCACTATCAATTaGTTTGCTGCAAAGATCAAG +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTTTTIN*FAAKIK
Trigger: CTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGT...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCTCTACCATATCCACTTaGTCTACTTTTAACCATGGA +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTSTIST*STFNHG
Trigger: TCCATGGTTAAAAGTAGAGCAAGTGGATATGGTAGA...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGTGTCGTTCTAAGTCCTaGAAACATACACACACTTGG +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQCRSKS*KHTHTW
Trigger: CCAAGTGTGTGTATGTTTGCAGGACTTAGAACGACA...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTTGTCGTTCTAAGTCCTaGAAACATACACACACTTGG +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPCRSKS*KHTHTW
Trigger: CCAAGTGTGTGTATGTTTGCAGGACTTAGAACGACA...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAACTCTCATGACTCAATaGGAGAACCTTACCCAAAAT +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGTLMTQ*ENLTQN
Trigger: ATTTTGGGTAAGGTTCTCCCATTGAGTCATGAGAGT...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAAAGATCATATGGCATTaGTACAGTGACAGACAGTTC +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGKIIWH*YSDRQF
Trigger: GAACTGTCTGTCACTGTACCAATGCCATATGATCTT...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATTCTTCATTGGCATATTaGTCCTCTGGACACTTCACA +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHSSLAY*SSGHFT
Trigger: TGTGAAGTGTCCAGAGGACCAATATGCCAATGAAGA...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR TCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGATTTGATCCAATAAACTaGGATCCAGGTCATGTGTTA +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGFDPIN*DPGHVL
Trigger: TAACACATGACCTGGATCTCAGTTTATTGGATCAAA...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTTCTGACTACACACTTTaGTCCAATAAACTGAGATCC +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPSDYTL*SNKLRS
Trigger: GGATCTCAGTTTATTGGATCAAAGTGTGTAGTCAGA...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATTCTGACTACACACTTTaGTCCAATAAACTGAGATCC +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHSDYTL*SNKLRS
Trigger: GGATCTCAGTTTATTGGATCAAAGTGTGTAGTCAGA...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTGCCTGTCTAAAGAACTaGAGAGACAAAAATGGAGAA +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPACLKN*RDKNGE
Trigger: TTCTCCATTTTTGTCTCTTCAGTTCTTTAGACAGGC...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAAGCCTGTCTAAAGAACTaGAGAGACAAAAATGGAGAA +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKACLKN*RDKNGE
Trigger: TTCTCCATTTTTGTCTCTTCAGTTCTTTAGACAGGC...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATGCCTGTCTAAAGAACTaGAGAGACAAAAATGGAGAA +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHACLKN*RDKNGE
Trigger: TTCTCCATTTTTGTCTCTTCAGTTCTTTAGACAGGC...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATCTAATCAAAAAGATCTaGCAATTCCACCTCACACCA +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHLIKKI*QFHLTP
Trigger: TGGTGTGAGGTGGAATTGTCAGATCTTTTTGATTAG...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGCTAATCAAAAAGATCTaGCAATTCCACCTCACACCA +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQLIKKI*QFHLTP
Trigger: TGGTGTGAGGTGGAATTGTCAGATCTTTTTGATTAG...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAACTAATCAAAAAGATCTaGCAATTCCACCTCACACCA +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKLIKKI*QFHLTP
Trigger: TGGTGTGAGGTGGAATTGTCAGATCTTTTTGATTAG...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTTGCTGCACTAATTGGTaGTCTGTAAGTGTAAGAATG +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPCCTNW*SVSVRM
Trigger: CATTCTTACACTTACAGATCACCAATTAGTGCAGCA...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGTGCTGCACTAATTGGTaGTCTGTAAGTGTAAGAATG +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQCCTNW*SVSVRM
Trigger: CATTCTTACACTTACAGATCACCAATTAGTGCAGCA...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGATTTCACATTGAACAGTaGACTGTCCTTCAAACACAA +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGFHIEQ*TVLQTQ
Trigger: TTGTGTTTGAAGGACAGTTCACTGTTCAATGTGAAA...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGTTATTCGCCAGGATTTaGAATGTTCCTGAGAAGCTA +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQLFARI*NVPEKL
Trigger: TAGCTTCTCAGGAACATTTCAAATCCTGGCGAATAA...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTACACACTTGGGTAATTaGGATTATACAGTATGCACC +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPTHLGN*DYTVCT
Trigger: GGTGCATACTGTATAATCTCAATTACCCAAGTGTGT...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCCTACATGAAATAATTTaGAAAGCTGAGTGCCACTTT +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTLHEII*KAECHF
Trigger: AAAGTGGCACTCAGCTTTGCAAATTATTTCATGTAG...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTACAAAATTCCTGATGTaGTATTTCCTCAGGCATCTG +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPTKFLM*YFLRHL
Trigger: CAGATGCCTGAGGAAATAGCACATCAGGAATTTTGT...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGACAAAATTCCTGATGTaGTATTTCCTCAGGCATCTG +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQTKFLM*YFLRHL
Trigger: CAGATGCCTGAGGAAATAGCACATCAGGAATTTTGT...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCCACTATCAATTGCTTTaGTGCAAAGATCAAGATTTG +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTHYQLL*CKDQDL
Trigger: CAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTG...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGGTCAAAGGCTGCAAGTaGATTACTTTTATCCATTGG +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQVKGCK*ITFIHW
Trigger: CCAATGGATAAAAGTAATGCACTTGCAGCCTTTGAC...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTCATGTGTCTACTTGTTaGAGAATCATCTCATGGAGT +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPHVSTC*RIISWS
Trigger: ACTCCATGAGATGATTCTGCAACAAGTAGACACATG...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR CCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGACTTATACCCAACAATTaGATTGAAGACCAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGLIPNN*IEDQQN
Trigger: ATTCTGCTGGTCTTCAATCCAATTGTTGGGTATAAG...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAAACTCTCATGACTCAATaGGAGAACCTTACCCAAAAT +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKTLMTQ*ENLTQN
Trigger: ATTTTGGGTAAGGTTCTCCCATTGAGTCATGAGAGT...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGACTAATAAAAAGAAAGTaGAGAGAGCCCCAAACTCAT +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGLIKRK*REPQTH
Trigger: ATGAGTTTGGGGCTCTCTCCACTTTCTTTTTATTAG...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAAAAGATCATATGGCATTaGTACAGTGACAGACAGTTC +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKKIIWH*YSDRQF
Trigger: GAACTGTCTGTCACTGTACCAATGCCATATGATCTT...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTAAGATCATATGGCATTaGTACAGTGACAGACAGTTC +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPKIIWH*YSDRQF
Trigger: GAACTGTCTGTCACTGTACCAATGCCATATGATCTT...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCGACACACTAAATAAATaGCATAGAGACATTTTCAGC +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTDTLNK*HRDIFS
Trigger: GCTGAAAATGTCTCTATGCCATTTATTTAGTGTGTC...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCACAAAGTATGTCCACTaGTATTATAACCTTTGGTTG +
Preference number: 2 (lower is better)
Translates to: SNIPNHFCITNARVTKTTTKYVH*YYNLWL
Trigger: CAACCAAAGGTTATAATACCAGTGGACATACTTTGT...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGACAAACAATGATGATCTaGCCATGTAGCATGTGTATA +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGQTMMI*PCSMCI
Trigger: TATACACATGCTACATGGCCAGATCATCATTGTTTG...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR CAA 90 bp TCCCTGATGGTTTATACATTTCTTCAATGTGAACATAGTTTCACATaGAACAGTGAACTGTCCTTCAAACACAAAATTCCTGATGTGCTA +
Preference number: 2 (lower is better)
Translates to: SLMVYTFLQCEHSFT*NSELSFKHKIPDVL
Trigger: TAGCACATCAGGAATTTTGTGTTTGAAGGACAGTTCACTGTTCAATGTGAAACTATGTTCACATTGAAGAAATGTATAAACCATCAGGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATTTTGATCCAATAAACTaGGATCCAGGTCATGTGTTA +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHFDPIN*DPGHVL
Trigger: TAACACATGACCTGGATCTCAGTTTATTGGATCAAA...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATTTTGATCCAATAAACTaGGATCCAGGTCATGTGTTA +
Preference number: 2 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDFDPIN*DPGHVL
Trigger: TAACACATGACCTGGATCTCAGTTTATTGGATCAAA...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAATTTGATCCAATAAACTaGGATCCAGGTCATGTGTTA +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKFDPIN*DPGHVL
Trigger: TAACACATGACCTGGATCTCAGTTTATTGGATCAAA...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATATGCTTTTCAGGGAATaGCCACTTAGGAAAATAACA +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHMLFRE*PLRKIT
Trigger: TGTTATTTTCCTAAGTGGTCATTCCCTGAAAAGCAT...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATATGCTTTTCAGGGAATaGCCACTTAGGAAAATAACA +
Preference number: 2 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDMLFRE*PLRKIT
Trigger: TGTTATTTTCCTAAGTGGTCATTCCCTGAAAAGCAT...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAAATGCTTTTCAGGGAATaGCCACTTAGGAAAATAACA +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKMLFRE*PLRKIT
Trigger: TGTTATTTTCCTAAGTGGTCATTCCCTGAAAAGCAT...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGATGCTTTTCAGGGAATaGCCACTTAGGAAAATAACA +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQMLFRE*PLRKIT
Trigger: TGTTATTTTCCTAAGTGGTCATTCCCTGAAAAGCAT...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTAATCACATGATCATCTaGTCAGATTCTGAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPNHMII*SDSERV
Trigger: GACTCTTTCAGAATCTGATCAGATGATCATGTGATT...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATAATCACATGATCATCTaGTCAGATTCTGAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHNHMII*SDSERV
Trigger: GACTCTTTCAGAATCTGATCAGATGATCATGTGATT...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGAATCACATGATCATCTaGTCAGATTCTGAAAGAGTC +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQNHMII*SDSERV
Trigger: GACTCTTTCAGAATCTGATCAGATGATCATGTGATT...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTTTTCACATTGAACAGTaGACTGTCCTTCAAACACAA +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPFHIEQ*TVLQTQ
Trigger: TTGTGTTTGAAGGACAGTTCACTGTTCAATGTGAAA...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATTTTCACATTGAACAGTaGACTGTCCTTCAAACACAA +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHFHIEQ*TVLQTQ
Trigger: TTGTGTTTGAAGGACAGTTCACTGTTCAATGTGAAA...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGAACATAGTTTCACATTaGACAGTGAACTGTCCTTCA +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQNIVSH*TVNCPS
Trigger: TGAAGGACAGTTCACTGTTCAATGTGAAACTATGTT...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTAACATAGTTTCACATTaGACAGTGAACTGTCCTTCA +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPNIVSH*TVNCPS
Trigger: TGAAGGACAGTTCACTGTTCAATGTGAAACTATGTT...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTTTCATGTCTCTTCCTTaGCAATGTAAATGTAACCCA +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPFMSLP*QCKCNP
Trigger: TGGGTTACATTTACATTGTCAAGGAAGAGACATGAA...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTATTATCCTTGAAAACTaGGCCACTATTTCAGGAAAG +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPIILEN*ATISGK
Trigger: CTTTCCTGAAATAGTGGCTCAGTTTTCAAGGATAAT...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATTTTTTCTGCCTCCTATaGCAAGATATTTTTCAAGCC +
Preference number: 2 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDFFCLL*QDIFQA
Trigger: GGCTTGAAAAATATCTTGGCATAGGAGGCAGAAAAA...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAAAAAATAATCATGATTTaGAGAGAGAGGGTGGTACCA +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKKIIMI*RERVVP
Trigger: TGGTACCACCCTCTCTCTGCAAATCATGATTATTTT...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
36% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATAAAATAATCATGATTTaGAGAGAGAGGGTGGTACCA +
Preference number: 2 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDKIIMI*RERVVP
Trigger: TGGTACCACCCTCTCTCTGCAAATCATGATTATTTT...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTTGTCTAAGCAAATACTaGTCAGGGCAAGATGATTTT +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPCLSKY*SGQDDF
Trigger: AAAATCATCTTGCCCTGAGCAGTATTTGCTTAGACA...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGACAACCACTATCAATTaGTTTGCTGCAAAGATCAAG +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQTTTIN*FAAKIK
Trigger: CTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGT...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGGTCTTCCAATGGCTTTaGCAATCTTATATCACTAAG +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQVFQWL*QSYITK
Trigger: CTTAGTGATATAAGATTGGCAAAGCCATTGGAAGAC...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTTCTACCATATCCACTTaGTCTACTTTTAACCATGGA +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPSTIST*STFNHG
Trigger: TCCATGGTTAAAAGTAGAGCAAGTGGATATGGTAGA...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGCTAATAAAAAGAAAGTaGAGAGAGCCCCAAACTCAT +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQLIKRK*REPQTH
Trigger: ATGAGTTTGGGGCTCTCTCCACTTTCTTTTTATTAG...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAACTAATAAAAAGAAAGTaGAGAGAGCCCCAAACTCAT +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKLIKRK*REPQTH
Trigger: ATGAGTTTGGGGCTCTCTCCACTTTCTTTTTATTAG...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAGTAATAAAGATCATATaGCATTGGTACAGTGACAGA +
Preference number: 2 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGVIKII*HWYSDR
Trigger: TCTGTCACTGTACCAATGCCATATGATCTTTATTAC...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAACCATGTTTGTCATGTTaGAAATTTCATTTTCTGGGC +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKPCLSC*KFHFLG
Trigger: GCCCAGAAAATGAAATTTCCAACATGACAAACATGG...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR GCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAACTACATGAAATAATTTaGAAAGCTGAGTGCCACTTT +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKLHEII*KAECHF
Trigger: AAAGTGGCACTCAGCTTTGCAAATTATTTCATGTAG...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATCTACATGAAATAATTTaGAAAGCTGAGTGCCACTTT +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHLHEII*KAECHF
Trigger: AAAGTGGCACTCAGCTTTGCAAATTATTTCATGTAG...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGCTACATGAAATAATTTaGAAAGCTGAGTGCCACTTT +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQLHEII*KAECHF
Trigger: AAAGTGGCACTCAGCTTTGCAAATTATTTCATGTAG...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAAATTCCAATCTTTGTTTaGTTTTACCTATGCTATGGG +
Preference number: 2 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKIPIFV*FYLCYG
Trigger: CCCATAGCATAGGTAAAAGCAAACAAAGATTGGAAT...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATATTCCAATCTTTGTTTaGTTTTACCTATGCTATGGG +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHIPIFV*FYLCYG
Trigger: CCCATAGCATAGGTAAAAGCAAACAAAGATTGGAAT...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTATTCCAATCTTTGTTTaGTTTTACCTATGCTATGGG +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPIPIFV*FYLCYG
Trigger: CCCATAGCATAGGTAAAAGCAAACAAAGATTGGAAT...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR GCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGATTCCAATCTTTGTTTaGTTTTACCTATGCTATGGG +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQIPIFV*FYLCYG
Trigger: CCCATAGCATAGGTAAAAGCAAACAAAGATTGGAAT...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGGTAATAAAGATCATATaGCATTGGTACAGTGACAGA +
Preference number: 2 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQVIKII*HWYSDR
Trigger: TCTGTCACTGTACCAATGCCATATGATCTTTATTAC...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTGTAATAAAGATCATATaGCATTGGTACAGTGACAGA +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPVIKII*HWYSDR
Trigger: TCTGTCACTGTACCAATGCCATATGATCTTTATTAC...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATGACACACTAAATAAATaGCATAGAGACATTTTCAGC +
Preference number: 2 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHDTLNK*HRDIFS
Trigger: GCTGAAAATGTCTCTATGCCATTTATTTAGTGTGTC...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTGACACACTAAATAAATaGCATAGAGACATTTTCAGC +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPDTLNK*HRDIFS
Trigger: GCTGAAAATGTCTCTATGCCATTTATTTAGTGTGTC...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTACAAAGTATGTCCACTaGTATTATAACCTTTGGTTG +
Preference number: 2 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPTKYVH*YYNLWL
Trigger: CAACCAAAGGTTATAATACCAGTGGACATACTTTGT...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR GCA 72 bp GGCTTGCTCAGCTTGCTCTCTTATAGAACCCAAGACTaGCAGCCCAGAGATGGTCCCACCCACAAGGGGCCC +
Preference number: 3 (lower is better)
Translates to: GLLSLLSYRTQD*QPRDGPTHKGP
Trigger: GGGCCCCTTGTGGGTGGGACCATCTCTGGGCTGGCAGTCTTGGGTTCTATAAGAGAGCAAGCTGAGCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR GCA 72 bp GAGCACTGCCTGGTGTGGCCTCAGTGGCTGAAGATGTaGCTAATACTCAAGAGACTTGAGGCCCTAGGGAAG +
Preference number: 3 (lower is better)
Translates to: EHCLVWPQWLKM*LILKRLEALGK
Trigger: CTTCCCTAGGGCCTCAAGTCTCTTGAGTATTAGGCACATCTTCAGCCACTGAGGCCACACCAGGCAGTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR GCA 72 bp TTCTTCACTGGCTTGCTTCCCCTGGCTTGCTCAGCTTaGTCTCTTATAGAACCCAAGACTGCCAGCCCAGAG +
Preference number: 3 (lower is better)
Translates to: FFTGLLPLACSA*SLIEPKTASPE
Trigger: CTCTGGGCTGGCAGTCTTGGGTTCTATAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTGAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CCA 72 bp GCCTCTGACACTTACAGAGCTGAGCACTGCCTGGTGTaGCCTCAGTGGCTGAAGATGTGCCTAATACTCAAG +
Preference number: 3 (lower is better)
Translates to: ASDTYRAEHCLV*PQWLKMCLILK
Trigger: CTTGAGTATTAGGCACATCTTCAGCCACTGAGGCCACACCAGGCAGTGCTCAGCTCTGTAAGTGTCAGAGGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CCA 72 bp AAGCAGGTCAGAAATCAGGAGCTGATGCAGAAGCCATaGAGGGATGTTCTTCACTGGCTTGCTTCCCCTGGC +
Preference number: 3 (lower is better)
Translates to: KQVRNQELMQKP*RDVLHWLASPG
Trigger: GCCAGGGGAAGCAAGCCAGTGAAGAACATCCCTCCATGGCTTCTGCATCAGCTCCTGATTTCTGACCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CCA 72 bp ACTTACAGAGCTGAGCACTGCCTGGTGTGGCCTCAGTaGCTGAAGATGTGCCTAATACTCAAGAGACTTGAG +
Preference number: 3 (lower is better)
Translates to: TYRAEHCLVWPQ*LKMCLILKRLE
Trigger: CTCAAGTCTCTTGAGTATTAGGCACATCTTCAGCCACTGAGGCCACACCAGGCAGTGCTCAGCTCTGTAAGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR TCA 72 bp AACAGCAGATGTCCTTTCCTTCCTGAGGGGATTTTCTaGGTCCTGGTCTGCAAGGCATACTACATACTGAGG +
Preference number: 3 (lower is better)
Translates to: NSRCPFLPEGIF*VLVCKAYYILR
Trigger: CCTCAGTATGTAGTATGCCTTGCAGACCAGGACTCAGAAAATCCCCTCAGGAAGGAAAGGACATCTGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR GCA 72 bp TCCTTCCCAGCATTCATTGACCATGTGTCTACTTGTTaGAGAATCATCTCATGGAGTGAGAGGGCCACAGCA +
Preference number: 3 (lower is better)
Translates to: SFPAFIDHVSTC*RIISWSERATA
Trigger: TGCTGTGGCCCTCTCACTCCATGAGATGATTCTGCAACAAGTAGACACATGGTCAATGAATGCTGGGAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR CCA 72 bp TCTGTATCTGGGGTTAAGAATTATGTATGTCGGGGTTaGGGATTTAGCTCAGTCACCGAGTGCTTGCCTAGG +
Preference number: 3 (lower is better)
Translates to: SVSGVKNYVCRG*GFSSVTECLPR
Trigger: CCTAGGCAAGCACTCGGTGACTGAGCTAAATCCCCAACCCCGACATACATAATTCTTAACCCCAGATACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CCA 72 bp AGAGAAAAGGGAAATAGGATCAGGTATGGGAGTTTGTaGCAGGAGAGAAACACAAAGCCAGAGGGCCAAGAG +
Preference number: 3 (lower is better)
Translates to: REKGNRIRYGSL*QERNTKPEGQE
Trigger: CTCTTGGCCCTCTGGCTTTGTGTTTCTCTCCTGCCACAAACTCCCATACCTGATCCTATTTCCCTTTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp GTCCTTTCCTTCCTGAGGGGATTTTCTGAGTCCTGGTCTGCAAGGCATACTACACCTTCCCAGCATTCATaGACCATGTGTCTACTTGTT +
Preference number: 3 (lower is better)
Translates to: VLSFLRGFSESWSARHTTPSQHS*TMCLLV
Trigger: AACAAGTAGACACATGGTCAATGAATGCTGGGAAGG...TGTAGTATGCCTTGCAGACCAGGACTCAGAAAATCCCCTCAGGAAGGAAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR CAA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCATTCAGAACAACACTCTaGGAACAATCTATGGCCACC +
Preference number: 3 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSFRTTL*EQSMAT
Trigger: GGTGGCCATAGATTGTTCCAAGAGTGTTGTTCTGAA...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTTCAGTCACCGAGTGCTaGCCTAGGAAGAACAAGGCC +
Preference number: 3 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLISVTEC*PRKNKA
Trigger: GGCCTTGTTCTTCCTAGGCAAGCACTCGGTGACTGA...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCATCACCAAATTGTACTTaGGGGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSSPNCT*GCVCVC
Trigger: ACACACACACACACACCCCAAAGTACAATTTGGTGA...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCACCCAAAATGACTAAATaGGGAGAGAGATCTGGGAGA +
Preference number: 3 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSPKMTK*GERSGR
Trigger: TCTCCCAGATCTCTCTCCCAATTTAGTCATTTTGGG...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR TCA 72 bp GCCCATGTATCCAAGGACACAGTAGAAGGCAACCACTaGACCTTTGTTGCAAACAATGATGATCTGGCCATG +
Preference number: 3 (lower is better)
Translates to: AHVSKDTVEGNH*TFVANNDDLAM
Trigger: CATGGCCAGATCATCATTGTTTGCAACAAAGGTTCAGTGGTTGCCTTCTACTGTGTCCTTGGATACATGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR GCA 72 bp GCTTACATTTCCATACTGCTGTTGATCAGCAAAGGATaGAGGACTGGGACTCAAGCAGGTCAGAAATCAGGA +
Preference number: 3 (lower is better)
Translates to: AYISILLLISKG*RTGTQAGQKSG
Trigger: TCCTGATTTCTGACCTGCTTGAGTCCCAGTCCTGCATCCTTTGCTGATCAACAGCAGTATGGAAATGTAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCTCAGTCACCGAGTGCTaGCCTAGGAAGAACAAGGCC +
Preference number: 3 (lower is better)
Translates to: SNIPNHFCITNARVTKTTSVTEC*PRKNKA
Trigger: GGCCTTGTTCTTCCTAGGCAAGCACTCGGTGACTGA...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCATTTTGGATCACCAAATaGTACTTTGGGGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSFWITK*YFGVCV
Trigger: CACACACACCCCAAAGTACAATTTGGTGATCCAAAA...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCATACCCAACAATTGGATaGAAGACCAGCAGAATTAGG +
Preference number: 3 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSYPTIG*KTSRIR
Trigger: CCTAATTCTGCTGGTCTTCAATCCAATTGTTGGGTA...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACATCAGGTATGGGAGTTaGTGGCAGGAGAGAAACACA +
Preference number: 3 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDIRYGS*WQERNT
Trigger: TGTGTTTCTCTCCTGCCACAAACTCCCATACCTGAT...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR TCA 72 bp TTGGTAACAATCGCTCCTATCCAGTTCCACCTGAAATaGACCACTAAGGACACCATGGCTAGTGGTAGAGAT +
Preference number: 3 (lower is better)
Translates to: LVTIAPIQFHLK*TTKDTMASGRD
Trigger: ATCTCTACCACTAGCCATGGTGTCCTTAGTGGTTCATTTCAGGTGGAACTGGATAGGAGCGATTGTTACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR TCA 72 bp ATGTATGAGGCAGATTCCTGGCCAAGAAAGCTACAGTaGAACTTGCTAGAGCAATGGAGCCCATGTATCCAA +
Preference number: 3 (lower is better)
Translates to: MYEADSWPRKLQ*NLLEQWSPCIQ
Trigger: TTGGATACATGGGCTCCATTGCTCTAGCAAGTTTCACTGTAGCTTTCTTGGCCAGGAATCTGCCTCATACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR CAA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACTTCAGAACAACACTCTaGGAACAATCTATGGCCACC +
Preference number: 3 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDFRTTL*EQSMAT
Trigger: GGTGGCCATAGATTGTTCCAAGAGTGTTGTTCTGAA...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCAGACATAGCTGAGAGTTaGGTTATTGGCTTTGACTAT +
Preference number: 3 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSDIAES*VIGFDY
Trigger: ATAGTCAAAGCCAATAACCAAACTCTCAGCTATGTC...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR CCA 72 bp GGTCTGCAAGGCATACTACATACTGAGGGTAGAATCTaGTCTATACCTGTAGCCCACTTAATCATTTCCGTA +
Preference number: 3 (lower is better)
Translates to: GLQGILHTEGRI*SIPVAHLIISV
Trigger: TACGGAAATGATTAAGTGGGCTACAGGTATAGACCAGATTCTACCCTCAGTATGTAGTATGCCTTGCAGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR CCA 72 bp CCACAACTTTTTGGAGGCAGAGAGTTTGATCTTCATTaGCATATTGGTCCTCTGGACACTTCACACACTGAT +
Preference number: 3 (lower is better)
Translates to: PQLFGGREFDLH*HIGPLDTSHTD
Trigger: ATCAGTGTGTGAAGTGTCCAGAGGACCAATATGCCAATGAAGATCAAACTCTCTGCCTCCAAAAAGTTGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR CAA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGTCAGTCACCGAGTGCTaGCCTAGGAAGAACAAGGCC +
Preference number: 3 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQSVTEC*PRKNKA
Trigger: GGCCTTGTTCTTCCTAGGCAAGCACTCGGTGACTGA...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTTCAGTCACCGAGTGCTaGCCTAGGAAGAACAAGGCC +
Preference number: 3 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPSVTEC*PRKNKA
Trigger: GGCCTTGTTCTTCCTAGGCAAGCACTCGGTGACTGA...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACTACCCAACAATTGGATaGAAGACCAGCAGAATTAGG +
Preference number: 3 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDYPTIG*KTSRIR
Trigger: CCTAATTCTGCTGGTCTTCAATCCAATTGTTGGGTA...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTCCAGCTTGTATCAAGTaGACACACAAAATCGGCCAG +
Preference number: 3 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIPACIK*THKIGQ
Trigger: CTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGG...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAATGTTCTTCACTGGCTaGCTTCCCCTGGCTTGCTCA +
Preference number: 3 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGMFFTG*LPLACS
Trigger: TGAGCAAGCCAGGGGAAGCAAGCCAGTGAAGAACAT...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACGTTCACTACTGTAGTTaGAAGGGTGTACTGTTTGGA +
Preference number: 3 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDVHYCS*KGVLFG
Trigger: TCCAAACAGTACACCCTTCAAACTACAGTAGTGAAC...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR TCA 72 bp CCAAGAGTCAAATTCCAGTTCCTTCCCAGCATTCATTaGCCATGTGTCTACTTGTTGCAGAATCATCTCATG +
Preference number: 3 (lower is better)
Translates to: PRVKFQFLPSIH*PCVYLLQNHLM
Trigger: CATGAGATGATTCTGCAACAAGTAGACACATGGTCAATGAATGCTGGGAAGGAACTGGAATTTGACTCTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR TCA 72 bp TCTAAAACAGCCACAACTTTTTGGAGGCAGAGAGTTTaGTCTTCATTGGCATATTGGTCCTCTGGACACTTC +
Preference number: 3 (lower is better)
Translates to: SKTATTFWRQRV*SSLAYWSSGHF
Trigger: GAAGTGTCCAGAGGACCAATATGCCAATGAAGATCAAACTCTCTGCCTCCAAAAAGTTGTGGCTGTTTTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR CCA 72 bp ATTGACCATGTGTCTACTTGTTGCAGAATCATCTCATaGAGTGAGAGGGCCACAGCATACACACCATTATAT +
Preference number: 3 (lower is better)
Translates to: IDHVSTCCRIIS*SERATAYTPLY
Trigger: ATATAATGGTGTGTATGCTGTGGCCCTCTCACTCCATGAGATGATTCTGCAACAAGTAGACACATGGTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR CAA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACATCTTGGAAGAAGTTTaGAACCTTTTGAGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDILEEV*NLLSVL
Trigger: CAGGACACTCAAAAGGTTCAAAACTTCTTCCAAGAT...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTCCCAAAATGACTAAATaGGGAGAGAGATCTGGGAGA +
Preference number: 3 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIPKMTK*GERSGR
Trigger: TCTCCCAGATCTCTCTCCCAATTTAGTCATTTTGGG...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCATCAGGTATGGGAGTTaGTGGCAGGAGAGAAACACA +
Preference number: 3 (lower is better)
Translates to: SNIPNHFCITNARVTKTTIRYGS*WQERNT
Trigger: TGTGTTTCTCTCCTGCCACAAACTCCCATACCTGAT...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCCCAGCTTGTATCAAGTaGACACACAAAATCGGCCAG +
Preference number: 3 (lower is better)
Translates to: SNIPNHFCITNARVTKTTPACIK*THKIGQ
Trigger: CTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGG...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATATGTTCTTCACTGGCTaGCTTCCCCTGGCTTGCTCA +
Preference number: 3 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDMFFTG*LPLACS
Trigger: TGAGCAAGCCAGGGGAAGCAAGCCAGTGAAGAACAT...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAAATGTTCTTCACTGGCTaGCTTCCCCTGGCTTGCTCA +
Preference number: 3 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKMFFTG*LPLACS
Trigger: TGAGCAAGCCAGGGGAAGCAAGCCAGTGAAGAACAT...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTGTTTGGTTATTGGCTTaGACTATGGGAGTTTCTCGG +
Preference number: 3 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIVWLLA*TMGVSR
Trigger: CCGAGAAACTCCCATAGTCAAAGCCAATAACCAAAC...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR TCA 72 bp AAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATaGCTCAATGGGAGAACCTTACCCAAAATGACTAAA +
Preference number: 3 (lower is better)
Translates to: KGIRDPECERLS*LNGRTLPKMTK
Trigger: TTTAGTCATTTTGGGTAAGGTTCTCCCATTGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR TCA 72 bp TTGCCATTTCTTCAGAATGTTGCAAATAGTTATGTCTaGGGACCCAGATTACCACTCCTAGACACATACCCA +
Preference number: 3 (lower is better)
Translates to: LPFLQNVANSYV*GPRLPLLDTYP
Trigger: TGGGTATGTGTCTAGGAGTGGTAATCTGGGTCCTCAGACATAACTATTTGCAACATTCTGAAGAAATGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR TCA 72 bp GGAGAAATTCTGAGCCAGATTCCACAAAGAATCAGCTaGACCATGGTGCATATGAGAATGATGTATTTGGGT +
Preference number: 3 (lower is better)
Translates to: GEILSQIPQRIS*TMVHMRMMYLG
Trigger: ACCCAAATACATCATTCTCATATGCACCATGGTTCAGCTGATTCTTTGTGGAATCTGGCTCAGAATTTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR TCA 72 bp TGTGTATATCAGCATCAACAAATGGAGGAGAAATTCTaGGCCAGATTCCACAAAGAATCAGCTGAACCATGG +
Preference number: 3 (lower is better)
Translates to: CVYQHQQMEEKF*ARFHKESAEPW
Trigger: CCATGGTTCAGCTGATTCTTTGTGGAATCTGGCTCAGAATTTCTCCTCCATTTGTTGATGCTGATATACACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR CCA 72 bp ACAGTAAAGCTCAGGAATTCTCGAGATGTACAAGAATaGTCCAAGGCTTGTAGATACTGTCCATTCAGGTAT +
Preference number: 3 (lower is better)
Translates to: TVKLRNSRDVQE*SKACRYCPFRY
Trigger: ATACCTGAATGGACAGTATCTACAAGCCTTGGACCATTCTTGTACATCTCGAGAATTCCTGAGCTTTACTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCTCACCAAATTGTACTTaGGGGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: SNIPNHFCITNARVTKTTSPNCT*GCVCVC
Trigger: ACACACACACACACACCCCAAAGTACAATTTGGTGA...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTTTTTGGATCACCAAATaGTACTTTGGGGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIFWITK*YFGVCV
Trigger: CACACACACCCCAAAGTACAATTTGGTGATCCAAAA...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACCATTCCAATCTTTGTTaGCTTTTACCTATGCTATGG +
Preference number: 3 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDHSNLC*LLPMLW
Trigger: CCATAGCATAGGTAAAAGCAAACAAAGATTGGAATG...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAATCAGGTATGGGAGTTaGTGGCAGGAGAGAAACACA +
Preference number: 3 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGIRYGS*WQERNT
Trigger: TGTGTTTCTCTCCTGCCACAAACTCCCATACCTGAT...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGACCAGCTTGTATCAAGTaGACACACAAAATCGGCCAG +
Preference number: 3 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGPACIK*THKIGQ
Trigger: CTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGG...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCGGCACTGGGATAGCATaGTTCCTGAATCTATTACCA +
Preference number: 3 (lower is better)
Translates to: SNIPNHFCITNARVTKTTGTGIA*FLNLLP
Trigger: TGGTAATAGATTCAGGAACAATGCTATCCCAGTGCC...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCTACGTCCACCATAGTTaGGCAAGGGAATGTTCACTA +
Preference number: 3 (lower is better)
Translates to: SNIPNHFCITNARVTKTTYVHHS*ARECSL
Trigger: TAGTGAACATTCCCTTGCCAAACTATGGTGGACGTA...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR CAA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGATTCAGAACAACACTCTaGGAACAATCTATGGCCACC +
Preference number: 3 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGFRTTL*EQSMAT
Trigger: GGTGGCCATAGATTGTTCCAAGAGTGTTGTTCTGAA...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATACAAGGCCCTGGGTTTaGGTACTCAGCTTTGGAAAA +
Preference number: 3 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHTRPWV*VLSFGK
Trigger: TTTTCCAAAGCTGAGTACCAAAACCCAGGGCCTTGT...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCTTTTGGATCACCAAATaGTACTTTGGGGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: SNIPNHFCITNARVTKTTFWITK*YFGVCV
Trigger: CACACACACCCCAAAGTACAATTTGGTGATCCAAAA...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTATCTTGGAAGAAGTTTaGAACCTTTTGAGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIILEEV*NLLSVL
Trigger: CAGGACACTCAAAAGGTTCAAAACTTCTTCCAAGAT...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAACCAGCTTGTATCAAGTaGACACACAAAATCGGCCAG +
Preference number: 3 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKPACIK*THKIGQ
Trigger: CTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGG...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTCCAGCTTGTATCAAGTaGACACACAAAATCGGCCAG +
Preference number: 3 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPPACIK*THKIGQ
Trigger: CTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGG...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTTGTGATAACTCCAGCTaGTATCAAGTTGACACACAA +
Preference number: 3 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLICDNSS*YQVDTQ
Trigger: TTGTGTGTCAACTTGATACAAGCTGGAGTTATCACA...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTGGGTCAGGCAATATATaGAAATATTCCCATAATCCC +
Preference number: 3 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIGSGNI*KYSHNP
Trigger: GGGATTATGGGAATATTTCAATATATTGCCTGACCC...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR TCA 72 bp CAAGGATGTGGAGAAAGATTAACACTTTTTGATTGCTaGTGGAATCGTATACTGGTACAACCACACTGGAAC +
Preference number: 3 (lower is better)
Translates to: QGCGERLTLFDC*WNRILVQPHWN
Trigger: GTTCCAGTGTGGTTGTACCAGTATACGATTCCATCAGCAATCAAAAAGTGTTAATCTTTCTCCACATCCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CCA 72 bp CCTGAATCTATTACCACTATTTTCACTACAGGGTGCTaGACAAAGTATGTCCACTGGTATTATAACCTTTGG +
Preference number: 3 (lower is better)
Translates to: PESITTIFTTGC*TKYVHWYYNLW
Trigger: CCAAAGGTTATAATACCAGTGGACATACTTTGTCCAGCACCCTGTAGTGAAAATAGTGGTAATAGATTCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTTTCAGAACAACACTCTaGGAACAATCTATGGCCACC +
Preference number: 3 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPFRTTL*EQSMAT
Trigger: GGTGGCCATAGATTGTTCCAAGAGTGTTGTTCTGAA...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAATCACCAAATTGTACTTaGGGGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKSPNCT*GCVCVC
Trigger: ACACACACACACACACCCCAAAGTACAATTTGGTGA...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATTCACCAAATTGTACTTaGGGGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHSPNCT*GCVCVC
Trigger: ACACACACACACACACCCCAAAGTACAATTTGGTGA...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATTCACCAAATTGTACTTaGGGGTGTGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDSPNCT*GCVCVC
Trigger: ACACACACACACACACCCCAAAGTACAATTTGGTGA...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGCCCAAAATGACTAAATaGGGAGAGAGATCTGGGAGA +
Preference number: 3 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQPKMTK*GERSGR
Trigger: TCTCCCAGATCTCTCTCCCAATTTAGTCATTTTGGG...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTCCCAAAATGACTAAATaGGGAGAGAGATCTGGGAGA +
Preference number: 3 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPPKMTK*GERSGR
Trigger: TCTCCCAGATCTCTCTCCCAATTTAGTCATTTTGGG...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCGGGTCAGGCAATATATaGAAATATTCCCATAATCCC +
Preference number: 3 (lower is better)
Translates to: SNIPNHFCITNARVTKTTGSGNI*KYSHNP
Trigger: GGGATTATGGGAATATTTCAATATATTGCCTGACCC...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGGGCACTGGGATAGCATaGTTCCTGAATCTATTACCA +
Preference number: 3 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQGTGIA*FLNLLP
Trigger: TGGTAATAGATTCAGGAACAATGCTATCCCAGTGCC...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTGGCACTGGGATAGCATaGTTCCTGAATCTATTACCA +
Preference number: 3 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPGTGIA*FLNLLP
Trigger: TGGTAATAGATTCAGGAACAATGCTATCCCAGTGCC...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAACCATGTGTCTACTTGTaGCAGAATCATCTCATGGAG +
Preference number: 3 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKPCVYL*QNHLME
Trigger: CTCCATGAGATGATTCTGCAACAAGTAGACACATGG...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR CAA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAACCTGGAACAGTAGCCTaGAATGCCAATACTACAGTA +
Preference number: 3 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKPGTVA*NANTTV
Trigger: TACTGTAGTATTGGCATTCAAGGCTACTGTTCCAGG...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR TCA 72 bp TCCTTAGTCATCAGTGAAATGCTAATCAAAAAGATCTaGCAATTCCACCTCACACCAATCAGTATGGCTAAG +
Preference number: 3 (lower is better)
Translates to: SLVISEMLIKKI*QFHLTPISMAK
Trigger: CTTAGCCATACTGATTGGTGTGAGGTGGAATTGTCAGATCTTTTTGATTAGCATTTCACTGATGACTAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR TCA 72 bp AGTAGACTAACTCATCTTGTGAGGCCACAGTTACTTTaGTACTTAAACCACATAAAGACCCAGCAAAGAAAG +
Preference number: 3 (lower is better)
Translates to: SRLTHLVRPQLL*YLNHIKTQQRK
Trigger: CTTTCTTTGCTGGGTCTTTATGTGGTTTAAGTATCAAAGTAACTGTGGCCTCACAAGATGAGTTAGTCTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR GCA 72 bp TTCAAGCAGCTTAGCTTGATGTGTCGTTCTAAGTCCTaGAAACATACACACACTTGGGTAATTGAGATTATA +
Preference number: 3 (lower is better)
Translates to: FKQLSLMCRSKS*KHTHTWVIEII
Trigger: TATAATCTCAATTACCCAAGTGTGTGTATGTTTGCAGGACTTAGAACGACACATCAAGCTAAGCTGCTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATTTTTGGATCACCAAATaGTACTTTGGGGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDFWITK*YFGVCV
Trigger: CACACACACCCCAAAGTACAATTTGGTGATCCAAAA...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCCATTCCAATCTTTGTTaGCTTTTACCTATGCTATGG +
Preference number: 3 (lower is better)
Translates to: SNIPNHFCITNARVTKTTHSNLC*LLPMLW
Trigger: CCATAGCATAGGTAAAAGCAAACAAAGATTGGAATG...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAATACCCAACAATTGGATaGAAGACCAGCAGAATTAGG +
Preference number: 3 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKYPTIG*KTSRIR
Trigger: CCTAATTCTGCTGGTCTTCAATCCAATTGTTGGGTA...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTTACCCAACAATTGGATaGAAGACCAGCAGAATTAGG +
Preference number: 3 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPYPTIG*KTSRIR
Trigger: CCTAATTCTGCTGGTCTTCAATCCAATTGTTGGGTA...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGATGTGATAACTCCAGCTaGTATCAAGTTGACACACAA +
Preference number: 3 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGCDNSS*YQVDTQ
Trigger: TTGTGTGTCAACTTGATACAAGCTGGAGTTATCACA...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCTACAACAGAAGAATCTaGAGTGGCAGAAAAAGTACT +
Preference number: 3 (lower is better)
Translates to: SNIPNHFCITNARVTKTTYNRRI*SGRKST
Trigger: AGTACTTTTTCTGCCACTCAAGATTCTTCTGTTGTA...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCAGAAAATTTAATCTTTaGACACTGGGTAGGGTGGTA +
Preference number: 3 (lower is better)
Translates to: SNIPNHFCITNARVTKTTRKFNL*TLGRVV
Trigger: TACCACCCTACCCAGTGTCAAAAGATTAAATTTTCT...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCAACAACCACTATCAATaGCTTTGCTGCAAAGATCAA +
Preference number: 3 (lower is better)
Translates to: SNIPNHFCITNARVTKTTNNHYQ*LCCKDQ
Trigger: TTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTT...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCTGGTACACTAGGATTTaGATAACCAAGAATACACCA +
Preference number: 3 (lower is better)
Translates to: SNIPNHFCITNARVTKTTWYTRI*ITKNTP
Trigger: TGGTGTATTCTTGGTTATCAAAATCCTAGTGTACCA...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCCGGTTGGTTTTATTTTaGAAACGAGCACCATTACTA +
Preference number: 3 (lower is better)
Translates to: SNIPNHFCITNARVTKTTRLVLF*KRAPLL
Trigger: TAGTAATGGTGCTCGTTTCAAAAATAAAACCAACCG...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGACCACTGAACCTTTGTaGCAAACAATGATGATCTGG +
Preference number: 3 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQTTEPL*QTMMIW
Trigger: CCAGATCATCATTGTTTGCAACAAAGGTTCAGTGGT...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR CAA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGGCAACCACTGAACCTTaGTTGCAAACAATGATGATC +
Preference number: 3 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQATTEP*LQTMMI
Trigger: GATCATCATTGTTTGCAACAAAGGTTCAGTGGTTGC...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR TCA 72 bp ATGATGTCAAGGATGTGGAGAAAGATTAACACTTTTTaGTTGCTGATGGAATCGTATACTGGTACAACCACA +
Preference number: 3 (lower is better)
Translates to: MMSRMWRKINTF*LLMESYTGTTT
Trigger: TGTGGTTGTACCAGTATACGATTCCATCAGCAATCAAAAAGTGTTAATCTTTCTCCACATCCTTGACATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR TCA 72 bp AAAGCCACTATAATTCCATACTGGTCTCAGGGTCCCTaGTGGTTTATACATTTCTTCAATGTGAACATAGTT +
Preference number: 3 (lower is better)
Translates to: KATIIPYWSQGP*WFIHFFNVNIV
Trigger: AACTATGTTCACATTGAAGAAATGTATAAACCATCAGGGACCCTGAGACCAGTATGGAATTATAGTGGCTTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR TCA 72 bp TCTGATTGGAAAAGAGTTGGTATTATCCTTGAAAACTaGGCCACTATTTCAGGAAAGGTATGCCTATTATGG +
Preference number: 3 (lower is better)
Translates to: SDWKRVGIILEN*ATISGKVCLLW
Trigger: CCATAATAGGCATACCTTTCCTGAAATAGTGGCTCAGTTTTCAAGGATAATACCAACTCTTTTCCAATCAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR GCA 72 bp CACACTTGGGTAATTGAGATTATACAGTATGCACCATaGTCTCCCCATATTGTGAATATTCACCAACTAAAA +
Preference number: 3 (lower is better)
Translates to: HTWVIEIIQYAP*SPHIVNIHQLK
Trigger: TTTTAGTTGGTGAATATTCACAATATGGGGAGAGCATGGTGCATACTGTATAATCTCAATTACCCAAGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGACATTCCAATCTTTGTTaGCTTTTACCTATGCTATGG +
Preference number: 3 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGHSNLC*LLPMLW
Trigger: CCATAGCATAGGTAAAAGCAAACAAAGATTGGAATG...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTATCTTGGAAGAAGTTTaGAACCTTTTGAGTGTCCTG +
Preference number: 3 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPILEEV*NLLSVL
Trigger: CAGGACACTCAAAAGGTTCAAAACTTCTTCCAAGAT...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGTGTGATAACTCCAGCTaGTATCAAGTTGACACACAA +
Preference number: 3 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQCDNSS*YQVDTQ
Trigger: TTGTGTGTCAACTTGATACAAGCTGGAGTTATCACA...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATTGTGATAACTCCAGCTaGTATCAAGTTGACACACAA +
Preference number: 3 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDCDNSS*YQVDTQ
Trigger: TTGTGTGTCAACTTGATACAAGCTGGAGTTATCACA...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTTGTGATAACTCCAGCTaGTATCAAGTTGACACACAA +
Preference number: 3 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPCDNSS*YQVDTQ
Trigger: TTGTGTGTCAACTTGATACAAGCTGGAGTTATCACA...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGGAACATAGTTTCACATaGAACAGTGAACTGTCCTTC +
Preference number: 3 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQEHSFT*NSELSF
Trigger: GAAGGACAGTTCACTGTTCAATGTGAAACTATGTTC...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATGAACATAGTTTCACATaGAACAGTGAACTGTCCTTC +
Preference number: 3 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHEHSFT*NSELSF
Trigger: GAAGGACAGTTCACTGTTCAATGTGAAACTATGTTC...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGCATTCCAATCTTTGTTaGCTTTTACCTATGCTATGG +
Preference number: 3 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQHSNLC*LLPMLW
Trigger: CCATAGCATAGGTAAAAGCAAACAAAGATTGGAATG...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATCATTCCAATCTTTGTTaGCTTTTACCTATGCTATGG +
Preference number: 3 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDHSNLC*LLPMLW
Trigger: CCATAGCATAGGTAAAAGCAAACAAAGATTGGAATG...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTTACAACAGAAGAATCTaGAGTGGCAGAAAAAGTACT +
Preference number: 3 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPYNRRI*SGRKST
Trigger: AGTACTTTTTCTGCCACTCAAGATTCTTCTGTTGTA...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAATACAACAGAAGAATCTaGAGTGGCAGAAAAAGTACT +
Preference number: 3 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKYNRRI*SGRKST
Trigger: AGTACTTTTTCTGCCACTCAAGATTCTTCTGTTGTA...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTAGAAAATTTAATCTTTaGACACTGGGTAGGGTGGTA +
Preference number: 3 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPRKFNL*TLGRVV
Trigger: TACCACCCTACCCAGTGTCAAAAGATTAAATTTTCT...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTCCACTATCAATTGCTTaGCTGCAAAGATCAAGATTT +
Preference number: 3 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPPLSIA*LQRSRF
Trigger: AAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGG...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGTGGTACACTAGGATTTaGATAACCAAGAATACACCA +
Preference number: 3 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQWYTRI*ITKNTP
Trigger: TGGTGTATTCTTGGTTATCAAAATCCTAGTGTACCA...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTCGGTTGGTTTTATTTTaGAAACGAGCACCATTACTA +
Preference number: 3 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPRLVLF*KRAPLL
Trigger: TAGTAATGGTGCTCGTTTCAAAAATAAAACCAACCG...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR-3UTR CAA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAAGTAGAGATGTGTCCTTaGGAGATATTTGGTAAAGAT +
Preference number: 3 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKVEMCP*EIFGKD
Trigger: ATCTTTACCAAATATCTCCAAAGGACACATCTCTAC...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR-3UTR CAA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTTCCATGTTTGTCATGTaGGAAATTTCATTTTCTGGG +
Preference number: 3 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPSMFVM*EISFSG
Trigger: CCCAGAAAATGAAATTTCCAACATGACAAACATGGA...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR CCA 72 bp CCACATTCCAATCTTTGTTTGCTTTTACCTATGCTATaGGGTGCTTTAGTGAGTTTTATTAGTTCTCATAAG +
Preference number: 3 (lower is better)
Translates to: PHSNLCLLLPML*GALVSFISSHK
Trigger: CTTATGAGAACTAATAAAACTCACTAAAGCACCCCATAGCATAGGTAAAAGCAAACAAAGATTGGAATGTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CCA 72 bp AAGAATATGTCATACTCTGTATCCTGTTTCAAATTCTaGTTCATGATGACTAGTTCTCCAGCAGGATTTACA +
Preference number: 3 (lower is better)
Translates to: KNMSYSVSCFKF*FMMTSSPAGFT
Trigger: TGTAAATCCTGCTGGAGAACTAGTCATCATGAACCAGAATTTGAAACAGGATACAGAGTATGACATATTCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR TCA 72 bp ATCATTAGAGGTATAAAATTGTCTGACTACACACTTTaGTCCAATAAACTGAGATCCAGGTCATGTGTTAGA +
Preference number: 3 (lower is better)
Translates to: IIRGIKLSDYTL*SNKLRSRSCVR
Trigger: TCTAACACATGACCTGGATCTCAGTTTATTGGATCAAAGTGTGTAGTCAGACAATTTTATACCTCTAATGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CCA 72 bp TTTCAAGCCTTAATGGTGAAGCTGTTTTACTTAAGGTaGATAACCCAGTCTATTATTCTCTGTACTTTAAAC +
Preference number: 3 (lower is better)
Translates to: FQALMVKLFYLR*ITQSIILCTLN
Trigger: GTTTAAAGTACAGAGAATAATAGACTGGGTTATCCACCTTAAGTAAAACAGCTTCACCATTAAGGCTTGAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CAA 72 bp TGGAGGGATGTTCTTCACTGGCTTGCTTCCCCTGGCTaGCTCAGCTTGCTCTCTTATAGAACCCAAGACTGC +
Preference number: 4 (lower is better)
Translates to: WRDVLHWLASPG*LSLLSYRTQDC
Trigger: GCAGTCTTGGGTTCTATAAGAGAGCAAGCTGAGCAAGCCAGGGGAAGCAAGCCAGTGAAGAACATCCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCAAATCATCTCATGGAGTaGGAGGGCCACAGCATACAC +
Preference number: 4 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSNHLME*EGHSIH
Trigger: GTGTATGCTGTGGCCCTCTCACTCCATGAGATGATT...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCAACTGAGGGTAGAATCTaGTCTATACCTGTAGCCCAC +
Preference number: 4 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSTEGRI*SIPVAH
Trigger: GTGGGCTACAGGTATAGACCAGATTCTACCCTCAGT...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCACCAAGAAAGCTACAGTaGAACTTGCTAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSPRKLQ*NLLEQW
Trigger: CCATTGCTCTAGCAAGTTTCACTGTAGCTTTCTTGG...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACTGCAGAATCATCTCATaGAGTGAGAGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDCRIIS*SERATA
Trigger: TGCTGTGGCCCTCTCACTCCATGAGATGATTCTGCA...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCACCTCATTCTTCTTCCTaGAACAGTAGCCTTGAATGC +
Preference number: 4 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSPHSSS*NSSLEC
Trigger: GCATTCAAGGCTACTGTTCCAGGAAGAAGAATGAGG...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCATTTGGTTATTGGCTTTaGCTATGGGAGTTTCTCGGT +
Preference number: 4 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSFGYWL*LWEFLG
Trigger: ACCGAGAAACTCCCATAGTCAAAGCCAATAACCAAA...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR GCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACTGCAAAGCCAGCCAGTaGTTTTCCCAAAGGATCTCT +
Preference number: 4 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDCKASQ*FSQRIS
Trigger: AGAGATCCTTTGGGAAAAGCACTGGCTGGCTTTGCA...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR GCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACACTTTGGGGCAAAAATaGAAAGAAGCAGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDTLGQK*KEAALH
Trigger: GTGCAGGGCTGCTTCTTTGCATTTTTGCCCCAAAGT...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCATCTTCATTGGCATATTaGTCCTCTGGACACTTCACA +
Preference number: 4 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSSSLAY*SSGHFT
Trigger: TGTGAAGTGTCCAGAGGACCAATATGCCAATGAAGA...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACTGGAGGCAGAGAGTTTaGTCTTCATTGGCATATTGG +
Preference number: 4 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDWRQRV*SSLAYW
Trigger: CCAATATGCCAATGAAGATCAAACTCTCTGCCTCCA...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACCCACAAAGAATCAGCTaGACCATGGTGCATATGAGA +
Preference number: 4 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDPQRIS*TMVHMR
Trigger: TCTCATATGCACCATGGTTCAGCTGATTCTTTGTGG...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACAGAGCTTGGCTTCATTaGATGTATGAGGCAGATTCC +
Preference number: 4 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDRAWLH*MYEADS
Trigger: GGAATCTGCCTCATACATTCAATGAAGCCAAGCTCT...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCATCAAATGTATTGTCTTaGGTGTCACCTGCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSSNVLS*VSPACL
Trigger: TAGACAAGCAGGTGACACCCAAGACAATACATTTGA...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACCCTCATTCTTCTTCCTaGAACAGTAGCCTTGAATGC +
Preference number: 4 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDPHSSS*NSSLEC
Trigger: GCATTCAAGGCTACTGTTCCAGGAAGAAGAATGAGG...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CAA 72 bp CCGAGTGCTTGCCTAGGAAGAACAAGGCCCTGGGTTTaGGTACTCAGCTTTGGAAAAATAGTTTACATATGT +
Preference number: 4 (lower is better)
Translates to: PSACLGRTRPWV*VLSFGKIVYIC
Trigger: ACATATGTAAACTATTTTTCCAAAGCTGAGTACCAAAACCCAGGGCCTTGTTCTTCCTAGGCAAGCACTCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CAA 72 bp GCTCCTTTCTCTGTGATAACTCCAGCTTGTATCAAGTaGACACACAAAATCGGCCAGTACAGTAACCTAGAC +
Preference number: 4 (lower is better)
Translates to: APFSVITPACIK*THKIGQYSNLD
Trigger: GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGTTATCACAGAGAAAGGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CAA 72 bp GCAAGAGCAAAGTCACTCAGTTTCAAGCAGCTTAGCTaGATGTGTCGTTCTAAGTCCTGCAAACATACACAC +
Preference number: 4 (lower is better)
Translates to: ARAKSLSFKQLS*MCRSKSCKHTH
Trigger: GTGTGTATGTTTGCAGGACTTAGAACGACACATCAAGCTAAGCTGCTTGAAACTGAGTGACTTTGCTCTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACGTAGAAGGCAACCACTaGACCTTTGTTGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDVEGNH*TFVANN
Trigger: ATTGTTTGCAACAAAGGTTCAGTGGTTGCCTTCTAC...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCTGCAGAATCATCTCATaGAGTGAGAGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SNIPNHFCITNARVTKTTCRIIS*SERATA
Trigger: TGCTGTGGCCCTCTCACTCCATGAGATGATTCTGCA...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CAA 72 bp TTCTATTCCTGCACAAACATCATGACCAAGAAGCAGTaGGGGAGGAAAGGGTTTATTCGGCTTACATTTCCA +
Preference number: 4 (lower is better)
Translates to: FYSCTNIMTKKQ*GRKGFIRLTFP
Trigger: TGGAAATGTAAGCCGAATAAACCCTTTCCTCCCCAACTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CAA 72 bp TTTTTGGAGGCAGAGAGTTTGATCTTCATTGGCATATaGGTCCTCTGGACACTTCACACACTGATCCATGTT +
Preference number: 4 (lower is better)
Translates to: FLEAESLIFIGI*VLWTLHTLIHV
Trigger: AACATGGATCAGTGTGTGAAGTGTCCAGAGGACCAATATGCCAATGAAGATCAAACTCTCTGCCTCCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
3UTR CAA 72 bp AGTAGCCACCTCATTCTTCTTCCTGGAACAGTAGCCTaGAATGCCAATACTACAGTAATTGTCTTAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SSHLILLPGTVA*NANTTVIVLAK
Trigger: CTTGGCTAAGACAATTACTGTAGTATTGGCATTCAAGGCTACTGTTCCAGGAAGAAGAATGAGGTGGCTACT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
CDS-3UTR GCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACCATGTGTCTACTTGTTaGAGAATCATCTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDHVSTC*RIISWS
Trigger: ACTCCATGAGATGATTCTGCAACAAGTAGACACATG...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACTCAAATGTATTGTCTTaGGTGTCACCTGCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDSNVLS*VSPACL
Trigger: TAGACAAGCAGGTGACACCCAAGACAATACATTTGA...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCATCCTGTTTCAAATTCTaGTTCATGATGACTAGTTCT +
Preference number: 4 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSSCFKF*FMMTSS
Trigger: AGAACTAGTCATCATGAACCAGAATTTGAAACAGGA...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CAA 72 bp TCCAAGAGTCAAATTCCAGTTCCTTCCCAGCATTCATaGACCATGTGTCTACTTGTTGCAGAATCATCTCAT +
Preference number: 4 (lower is better)
Translates to: SKSQIPVPSQHS*TMCLLVAESSH
Trigger: ATGAGATGATTCTGCAACAAGTAGACACATGGTCAATGAATGCTGGGAAGGAACTGGAATTTGACTCTTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
CDS-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTAATCATCTCATGGAGTaGGAGGGCCACAGCATACAC +
Preference number: 4 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPNHLME*EGHSIH
Trigger: GTGTATGCTGTGGCCCTCTCACTCCATGAGATGATT...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTGTAGAAGGCAACCACTaGACCTTTGTTGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIVEGNH*TFVANN
Trigger: ATTGTTTGCAACAAAGGTTCAGTGGTTGCCTTCTAC...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR GCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAACTTTGGGGCAAAAATaGAAAGAAGCAGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGTLGQK*KEAALH
Trigger: GTGCAGGGCTGCTTCTTTGCATTTTTGCCCCAAAGT...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATTGCAGAATCATCTCATaGAGTGAGAGGGCCACAGCA +
Preference number: 4 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHCRIIS*SERATA
Trigger: TGCTGTGGCCCTCTCACTCCATGAGATGATTCTGCA...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAACTGAGGGTAGAATCTaGTCTATACCTGTAGCCCAC +
Preference number: 4 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGTEGRI*SIPVAH
Trigger: GTGGGCTACAGGTATAGACCAGATTCTACCCTCAGT...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATCAGTTCCACCTGAAATaGACCACTAAGGACACCATG +
Preference number: 4 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDQFHLK*TTKDTM
Trigger: CATGGTGTCCTTAGTGGTTCATTTCAGGTGGAACTG...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGACCAAGAAAGCTACAGTaGAACTTGCTAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGPRKLQ*NLLEQW
Trigger: CCATTGCTCTAGCAAGTTTCACTGTAGCTTTCTTGG...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATAGCATCTGGGGTCACTaGGTAAAATGCAGCACATAC +
Preference number: 4 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHSIWGH*VKCSTY
Trigger: GTATGTGCTGCATTTTACTCAGTGACCCCAGATGCT...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232837.2
ENSMUST00000233725.2
CDS-3UTR GCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTCATGTGTCTACTTGTTaGAGAATCATCTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIHVSTC*RIISWS
Trigger: ACTCCATGAGATGATTCTGCAACAAGTAGACACATG...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR GCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAAACTTTGGGGCAAAAATaGAAAGAAGCAGCCCTGCAC +
Preference number: 4 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKTLGQK*KEAALH
Trigger: GTGCAGGGCTGCTTCTTTGCATTTTTGCCCCAAAGT...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACTCCTGTTTCAAATTCTaGTTCATGATGACTAGTTCT +
Preference number: 4 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDSCFKF*FMMTSS
Trigger: AGAACTAGTCATCATGAACCAGAATTTGAAACAGGA...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAAACTGAGGGTAGAATCTaGTCTATACCTGTAGCCCAC +
Preference number: 4 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKTEGRI*SIPVAH
Trigger: GTGGGCTACAGGTATAGACCAGATTCTACCCTCAGT...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGACCTCATTCTTCTTCCTaGAACAGTAGCCTTGAATGC +
Preference number: 4 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGPHSSS*NSSLEC
Trigger: GCATTCAAGGCTACTGTTCCAGGAAGAAGAATGAGG...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CAA 72 bp AAAATACAAGGCATCTTGGAAGAAGTTTTGAACCTTTaGAGTGTCCTGAAGGCTGTACAGCATACTCCACAT +
Preference number: 4 (lower is better)
Translates to: KIQGILEEVLNL*SVLKAVQHTPH
Trigger: ATGTGGAGTATGCTGTACAGCCTTCAGGACACTCAAAAGGTTCAAAACTTCTTCCAAGATGCCTTGTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CAA 72 bp CTAAGGACACCATGGCTAGTGGTAGAGATGTGTCCTTaGGAGATATTTGGTAAAGATGAGGAAATTGTTCAT +
Preference number: 4 (lower is better)
Translates to: LRTPWLVVEMCP*EIFGKDEEIVH
Trigger: ATGAACAATTTCCTCATCTTTACCAAATATCTCCAAAGGACACATCTCTACCACTAGCCATGGTGTCCTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233111.2
CDS-3UTR TCA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCTTCAGGTTGCTGGTGTaGAAAAATGAAAGTCCCTAT +
Preference number: 4 (lower is better)
Translates to: SNIPNHFCITNARVTKTTFRLLV*KNESPY
Trigger: ATAGGGACTTTCATTTTTTCACACCAGCAACCTGAA...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAATGGAGGCAGAGAGTTTaGTCTTCATTGGCATATTGG +
Preference number: 4 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKWRQRV*SSLAYW
Trigger: CCAATATGCCAATGAAGATCAAACTCTCTGCCTCCA...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTTGGAGGCAGAGAGTTTaGTCTTCATTGGCATATTGG +
Preference number: 4 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPWRQRV*SSLAYW
Trigger: CCAATATGCCAATGAAGATCAAACTCTCTGCCTCCA...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGATTTGGTTATTGGCTTTaGCTATGGGAGTTTCTCGGT +
Preference number: 4 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGFGYWL*LWEFLG
Trigger: ACCGAGAAACTCCCATAGTCAAAGCCAATAACCAAA...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATCCACAAAGAATCAGCTaGACCATGGTGCATATGAGA +
Preference number: 4 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHPQRIS*TMVHMR
Trigger: TCTCATATGCACCATGGTTCAGCTGATTCTTTGTGG...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGCCACAAAGAATCAGCTaGACCATGGTGCATATGAGA +
Preference number: 4 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQPQRIS*TMVHMR
Trigger: TCTCATATGCACCATGGTTCAGCTGATTCTTTGTGG...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAGTAGAAGGCAACCACTaGACCTTTGTTGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGVEGNH*TFVANN
Trigger: ATTGTTTGCAACAAAGGTTCAGTGGTTGCCTTCTAC...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGCCAAGAAAGCTACAGTaGAACTTGCTAGAGCAATGG +
Preference number: 4 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQPRKLQ*NLLEQW
Trigger: CCATTGCTCTAGCAAGTTTCACTGTAGCTTTCTTGG...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGCCTCATTCTTCTTCCTaGAACAGTAGCCTTGAATGC +
Preference number: 4 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQPHSSS*NSSLEC
Trigger: GCATTCAAGGCTACTGTTCCAGGAAGAAGAATGAGG...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CAA 72 bp GCTTATTACCTGAATAAGAGTGGCACTGGGATAGCATaGTTCCTGAATCTATTACCACTATTTTCACTACAG +
Preference number: 4 (lower is better)
Translates to: AYYLNKSGTGIA*FLNLLPLFSLQ
Trigger: CTGTAGTGAAAATAGTGGTAATAGATTCAGGAACAATGCTATCCCAGTGCCACTCTTATTCAGGTAATAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATTTTGGTTATTGGCTTTaGCTATGGGAGTTTCTCGGT +
Preference number: 4 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDFGYWL*LWEFLG
Trigger: ACCGAGAAACTCCCATAGTCAAAGCCAATAACCAAA...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGGTAGAAGGCAACCACTaGACCTTTGTTGCAAACAAT +
Preference number: 4 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQVEGNH*TFVANN
Trigger: ATTGTTTGCAACAAAGGTTCAGTGGTTGCCTTCTAC...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGTCTTCATTGGCATATTaGTCCTCTGGACACTTCACA +
Preference number: 4 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQSSLAY*SSGHFT
Trigger: TGTGAAGTGTCCAGAGGACCAATATGCCAATGAAGA...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAATCTTCATTGGCATATTaGTCCTCTGGACACTTCACA +
Preference number: 4 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKSSLAY*SSGHFT
Trigger: TGTGAAGTGTCCAGAGGACCAATATGCCAATGAAGA...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTAATAAGATAGCACTTTaGGGCAAAAATGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLINKIAL*GKNAKK
Trigger: CTTCTTTGCATTTTTGCCCCAAAGTGCTATCTTATT...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CAA 72 bp ACAGTTAATCTGATTGGAAAAGAGTTGGTATTATCCTaGAAAACTGAGCCACTATTTCAGGAAAGGTATGCC +
Preference number: 4 (lower is better)
Translates to: TVNLIGKELVLS*KTEPLFQERYA
Trigger: GGCATACCTTTCCTGAAATAGTGGCTCAGTTTTCAAGGATAATACCAACTCTTTTCCAATCAGATTAACTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR TCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGTTCAGGTTGCTGGTGTaGAAAAATGAAAGTCCCTAT +
Preference number: 4 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQFRLLV*KNESPY
Trigger: ATAGGGACTTTCATTTTTTCACACCAGCAACCTGAA...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR GCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAACATGTGTCTACTTGTTaGAGAATCATCTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKHVSTC*RIISWS
Trigger: ACTCCATGAGATGATTCTGCAACAAGTAGACACATG...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATTCAAATGTATTGTCTTaGGTGTCACCTGCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHSNVLS*VSPACL
Trigger: TAGACAAGCAGGTGACACCCAAGACAATACATTTGA...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATTCAAATGTATTGTCTTaGGTGTCACCTGCTTGTCTA +
Preference number: 4 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDSNVLS*VSPACL
Trigger: TAGACAAGCAGGTGACACCCAAGACAATACATTTGA...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAACTAATAGAGAAATGTTaGGCAAGATATGGTAGTCCT +
Preference number: 4 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKLIEKC*ARYGSP
Trigger: AGGACTACCATATCTTGCCCAACATTTCTCTATTAG...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATCAAACAATGATGATCTaGCCATGTAGCATGTGTATA +
Preference number: 4 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHQTMMI*PCSMCI
Trigger: TATACACATGCTACATGGCCAGATCATCATTGTTTG...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAACAAACAATGATGATCTaGCCATGTAGCATGTGTATA +
Preference number: 4 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKQTMMI*PCSMCI
Trigger: TATACACATGCTACATGGCCAGATCATCATTGTTTG...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGCAAACAATGATGATCTaGCCATGTAGCATGTGTATA +
Preference number: 4 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQQTMMI*PCSMCI
Trigger: TATACACATGCTACATGGCCAGATCATCATTGTTTG...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CAA 72 bp GAATCGTATACTGGTACAACCACACTGGAACTAAATTaGCCATTTCTTCAGAATGTTGCAAATAGTTATGTC +
Preference number: 4 (lower is better)
Translates to: ESYTGTTTLELN*PFLQNVANSYV
Trigger: GACATAACTATTTGCAACATTCTGAAGAAATGGCAAATTTAGTTCCAGTGTGGTTGTACCAGTATACGATTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CAA 72 bp ATTGATTGGTATGATTACATAGTGAAAGTGGCCATCTaGCCAAAAGCAATCTACAAATTCAATGGAATCCCT +
Preference number: 4 (lower is better)
Translates to: IDWYDYIVKVAI*PKAIYKFNGIP
Trigger: AGGGATTCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATCATACCAATCAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CAA 72 bp TATTGTGCTAAGCAGAGAATTTACAACAGAAGAATCTaGAGTGGCAGAAAAAGTACTAAAGGGTTTAACATC +
Preference number: 4 (lower is better)
Translates to: YCAKQRIYNRRI*SGRKSTKGFNI
Trigger: GATGTTAAACCCTTTAGTACTTTTTCTGCCACTCAAGATTCTTCTGTTGTAAATTCTCTGCTTAGCACAATA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
3UTR CAA 72 bp CCAACTCCTGAACAGGCTTTATTACACTTACATGAGTaGTTCCATTATAGATATCAAATTATTATTCGCCAG +
Preference number: 4 (lower is better)
Translates to: PTPEQALLHLHE*FHYRYQIIIRQ
Trigger: CTGGCGAATAATAATTTGATATCTATAATGGAACAACTCATGTAAGTGTAATAAAGCCTGTTCAGGAGTTGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATTCCTGTTTCAAATTCTaGTTCATGATGACTAGTTCT +
Preference number: 4 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDSCFKF*FMMTSS
Trigger: AGAACTAGTCATCATGAACCAGAATTTGAAACAGGA...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAATCCTGTTTCAAATTCTaGTTCATGATGACTAGTTCT +
Preference number: 4 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKSCFKF*FMMTSS
Trigger: AGAACTAGTCATCATGAACCAGAATTTGAAACAGGA...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAAAATAAGATAGCACTTTaGGGCAAAAATGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKNKIAL*GKNAKK
Trigger: CTTCTTTGCATTTTTGCCCCAAAGTGCTATCTTATT...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CCA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTAATAAGATAGCACTTTaGGGCAAAAATGCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPNKIAL*GKNAKK
Trigger: CTTCTTTGCATTTTTGCCCCAAAGTGCTATCTTATT...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCACCTGGAACAGTAGCCTaGAATGCCAATACTACAGTA +
Preference number: 5 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSPGTVA*NANTTV
Trigger: TACTGTAGTATTGGCATTCAAGGCTACTGTTCCAGG...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp GGTGACCAGCTAAAGGTATCAGAGACCCAGAATGTGAGAGACTCTCATGACTCAAGAAAATCAAATGTATaGTCTTGGGTGTCACCTGCT +
Preference number: 5 (lower is better)
Translates to: GDQLKVSETQNVRDSHDSRKSNV*SWVSPA
Trigger: AGCAGGTGACACCCAAGACAATACATTTGATTTTCT...TGAGTCATGAGAGTCTCTCACATTCTGGGTCTCTGATACCTTTAGCTGGTCACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACCCATGTGTCTACTTGTaGCAGAATCATCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDPCVYL*QNHLME
Trigger: CTCCATGAGATGATTCTGCAACAAGTAGACACATGG...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACCCTGGAACAGTAGCCTaGAATGCCAATACTACAGTA +
Preference number: 5 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDPGTVA*NANTTV
Trigger: TACTGTAGTATTGGCATTCAAGGCTACTGTTCCAGG...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACACCACTGAACCTTTGTaGCAAACAATGATGATCTGG +
Preference number: 5 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDTTEPL*QTMMIW
Trigger: CCAGATCATCATTGTTTGCAACAAAGGTTCAGTGGT...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTTACGTCCACCATAGTTaGGCAAGGGAATGTTCACTA +
Preference number: 5 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIYVHHS*ARECSL
Trigger: TAGTGAACATTCCCTTGCCAAACTATGGTGGACGTA...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTCCTTCCCAGCATTCATaGACCATGTGTCTACTTGTT +
Preference number: 5 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIPSQHS*TMCLLV
Trigger: AACAAGTAGACACATGGTCAATGAATGCTGGGAAGG...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp ACTCCAGCTTGTATCAAGTTGACACACAAAATCGGCCAGTACAGTAACCTAGACTCTCCTAGATGGTTTTaGGTGTCTTTTATTCTCCAA +
Preference number: 5 (lower is better)
Translates to: TPACIKLTHKIGQYSNLDSPRWF*VSFILQ
Trigger: TTGGAGAATAAAAGACACCAAAAACCATCTAGGAGA...GTCTAGGTTACTGTACTGGCCGATTTTGTGTGTCAACTTGATACAAGCTGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTGTTCACTACTGTAGTTaGAAGGGTGTACTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIVHYCS*KGVLFG
Trigger: TCCAAACAGTACACCCTTCAAACTACAGTAGTGAAC...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCCCTTCCCAGCATTCATaGACCATGTGTCTACTTGTT +
Preference number: 5 (lower is better)
Translates to: SNIPNHFCITNARVTKTTPSQHS*TMCLLV
Trigger: AACAAGTAGACACATGGTCAATGAATGCTGGGAAGG...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCCCTGGAACAGTAGCCTaGAATGCCAATACTACAGTA +
Preference number: 5 (lower is better)
Translates to: SNIPNHFCITNARVTKTTPGTVA*NANTTV
Trigger: TACTGTAGTATTGGCATTCAAGGCTACTGTTCCAGG...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTACCACTGAACCTTTGTaGCAAACAATGATGATCTGG +
Preference number: 5 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLITTEPL*QTMMIW
Trigger: CCAGATCATCATTGTTTGCAACAAAGGTTCAGTGGT...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTGCAACCACTGAACCTTaGTTGCAAACAATGATGATC +
Preference number: 5 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIATTEP*LQTMMI
Trigger: GATCATCATTGTTTGCAACAAAGGTTCAGTGGTTGC...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGACCTTCCCAGCATTCATaGACCATGTGTCTACTTGTT +
Preference number: 5 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGPSQHS*TMCLLV
Trigger: AACAAGTAGACACATGGTCAATGAATGCTGGGAAGG...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCAGAAAATCAAATGTATaGTCTTGGGTGTCACCTGCT +
Preference number: 5 (lower is better)
Translates to: SNIPNHFCITNARVTKTTRKSNV*SWVSPA
Trigger: AGCAGGTGACACCCAAGACAATACATTTGATTTTCT...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp ACTCCCCACCATACTCCAAGACATGTGCTCTACTTTATTCATAGTTGCCTTATTGTAGAGATGTGTCCTTaGGAGATATTTGGTAAAGAT +
Preference number: 5 (lower is better)
Translates to: TPHHTPRHVLYFIHSCLIVEMCP*EIFGKD
Trigger: ATCTTTACCAAATATCTCCAAAGGACACATCTCTAC...AATAAGGCAACTATGAATAAAGTAGAGCACATGTCTTGGAGTATGGTGGGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp GATTACATAGTGAAAGTGGCCATCTTGCCAAAAGCAATCTACAAATTCAATGGAGTTCACTACTGTAGTTaGAAGGGTGTACTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: DYIVKVAILPKAIYKFNGVHYCS*KGVLFG
Trigger: TCCAAACAGTACACCCTTCAAACTACAGTAGTGAAC...TCCATTGAATTTGTAGATTGCTTTTGGCAAGATGGCCACTTTCACTATGTAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATTACGTCCACCATAGTTaGGCAAGGGAATGTTCACTA +
Preference number: 5 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDYVHHS*ARECSL
Trigger: TAGTGAACATTCCCTTGCCAAACTATGGTGGACGTA...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATTACGTCCACCATAGTTaGGCAAGGGAATGTTCACTA +
Preference number: 5 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHYVHHS*ARECSL
Trigger: TAGTGAACATTCCCTTGCCAAACTATGGTGGACGTA...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTCCATGTGTCTACTTGTaGCAGAATCATCTCATGGAG +
Preference number: 5 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPPCVYL*QNHLME
Trigger: CTCCATGAGATGATTCTGCAACAAGTAGACACATGG...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGCCTTCCCAGCATTCATaGACCATGTGTCTACTTGTT +
Preference number: 5 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQPSQHS*TMCLLV
Trigger: AACAAGTAGACACATGGTCAATGAATGCTGGGAAGG...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATCCTGGAACAGTAGCCTaGAATGCCAATACTACAGTA +
Preference number: 5 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHPGTVA*NANTTV
Trigger: TACTGTAGTATTGGCATTCAAGGCTACTGTTCCAGG...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCTCTCCTAGATGGTTTTaGGTGTCTTTTATTCTCCAA +
Preference number: 5 (lower is better)
Translates to: SNIPNHFCITNARVTKTTSPRWF*VSFILQ
Trigger: TTGGAGAATAAAAGACACCAAAAACCATCTAGGAGA...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp AGCAACATCCCAAACCACTTCTGTATAACAAATGCTAGGGTAACAAAAACAACCGTAGAGATGTGTCCTTaGGAGATATTTGGTAAAGAT +
Preference number: 5 (lower is better)
Translates to: SNIPNHFCITNARVTKTTVEMCP*EIFGKD
Trigger: ATCTTTACCAAATATCTCCAAAGGACACATCTCTAC...GGTTGTTTTTGTTACCCTAGCATTTGTTATACAGAAGTGGTTTGGGATGTTGCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATGTTCACTACTGTAGTTaGAAGGGTGTACTGTTTGGA +
Preference number: 5 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDVHYCS*KGVLFG
Trigger: TCCAAACAGTACACCCTTCAAACTACAGTAGTGAAC...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp AAATACTGCTCAGGGCAAGATGATTTTAGTGCAGAATTCTATCATACCTTCAAAACCACTGAACCTTTGTaGCAAACAATGATGATCTGG +
Preference number: 5 (lower is better)
Translates to: KYCSGQDDFSAEFYHTFKTTEPL*QTMMIW
Trigger: CCAGATCATCATTGTTTGCAACAAAGGTTCAGTGGT...TTTGAAGGTATGATAGAATTCTGCACTAAAATCATCTTGCCCTGAGCAGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTACCACTGAACCTTTGTaGCAAACAATGATGATCTGG +
Preference number: 5 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPTTEPL*QTMMIW
Trigger: CCAGATCATCATTGTTTGCAACAAAGGTTCAGTGGT...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTGCAACCACTGAACCTTaGTTGCAAACAATGATGATC +
Preference number: 5 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPATTEP*LQTMMI
Trigger: GATCATCATTGTTTGCAACAAAGGTTCAGTGGTTGC...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp CTAAACACTAACATATGTAGAAGAAGGGGTGTTCCTTTCAACAAATGTATTCCTAGAAAATCAAATGTATaGTCTTGGGTGTCACCTGCT +
Preference number: 5 (lower is better)
Translates to: LNTNICRRRGVPFNKCIPRKSNV*SWVSPA
Trigger: AGCAGGTGACACCCAAGACAATACATTTGATTTTCT...AGGAATACATTTGTTGAAAGGAACACCCCTTCTTCTACATATGTTAGTGTTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGAGAAAATCAAATGTATaGTCTTGGGTGTCACCTGCT +
Preference number: 5 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQRKSNV*SWVSPA
Trigger: AGCAGGTGACACCCAAGACAATACATTTGATTTTCT...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATTCTCCTAGATGGTTTTaGGTGTCTTTTATTCTCCAA +
Preference number: 5 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHSPRWF*VSFILQ
Trigger: TTGGAGAATAAAAGACACCAAAAACCATCTAGGAGA...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp TCCAACACAATTCTTCAAAAACATGGAAAGAGCAATTCTCAACTTCATCTGGATTCTCCTAGATGGTTTTaGGTGTCTTTTATTCTCCAA +
Preference number: 5 (lower is better)
Translates to: SNTILQKHGKSNSQLHLDSPRWF*VSFILQ
Trigger: TTGGAGAATAAAAGACACCAAAAACCATCTAGGAGA...ATCCAGATGAAGTTGAGAATTGCTCTTTCCATGTTTTTGAAGAATTGTGTTGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp TCATGTCTCTTCCTTGACAATGTAAATGTAACCCAGCATAATAGAAGTTTTCAGTCTCCTAGATGGTTTTaGGTGTCTTTTATTCTCCAA +
Preference number: 5 (lower is better)
Translates to: SCLFLDNVNVTQHNRSFQSPRWF*VSFILQ
Trigger: TTGGAGAATAAAAGACACCAAAAACCATCTAGGAGA...CTGAAAACTTCTATTATGCTGGGTTACATTTACATTGTCAAGGAAGAGACATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233111.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS-3UTR CAA 90 bp GAACAACCACTATCAATTGCTTTGCTGCAAAGATCAAGATTTGTTACAAAGCATGTAGAGATGTGTCCTTaGGAGATATTTGGTAAAGAT +
Preference number: 5 (lower is better)
Translates to: EQPLSIALLQRSRFVTKHVEMCP*EIFGKD
Trigger: ATCTTTACCAAATATCTCCAAAGGACACATCTCTAC...ATGCTTTGTAACAAATCTTGATCTTTGCAGCAAAGCAATTGATAGTGGTTGTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000124773.3
ENSMUST00000232837.2
ENSMUST00000233725.2
ENSMUST00000233739.2
CDS CAA 90 bp AGCCACAACTTTTTGGAGGCAGAGAGTTTGATCTTCATTGGCATATaGGTCCTCTGGACACTTCACACACTGATCCATGTTTTGATAAAT +
Preference number: 6 (lower is better)
Translates to: SHNFLEAESLIFIGI*VLWTLHTLIHVLIN
Trigger: ATTTATCAAAACATGGATCAGTGTGTGAAGTGTCCAGAGGACCAATATGCCAATGAAGATCAAACTCTCTGCCTCCAAAAAGTTGTGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232837.2
ENSMUST00000233739.2
CDS CCA 72 bp GCAGAGAGTTTGATCTTCATTGGCATATTGGTCCTCTaGACACTTCACACACTGATCCATGTTTTGATAAAT +
Preference number: 6 (lower is better)
Translates to: AESLIFIGILVL*TLHTLIHVLIN
Trigger: ATTTATCAAAACATGGATCAGTGTGTGAAGTGTCCAGAGGACCAATATGCCAATGAAGATCAAACTCTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232837.2
ENSMUST00000233739.2
CDS CAA 72 bp TTGGTCCTCTGGACACTTCACACACTGATCCATGTTTaGATAAATGATAACATTACTTGTCATGTTGGAAAT +
Preference number: 6 (lower is better)
Translates to: LVLWTLHTLIHV*INDNITCHVGN
Trigger: ATTTCCAACATGACAAGTAATGTTATCATTTATCAAAACATGGATCAGTGTGTGAAGTGTCCAGAGGACCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232837.2
ENSMUST00000233739.2