Pregenerated sensors for VMN2R62 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091926Ensembl transcript IDs: ENSMUST00000169130.3
Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGGAAAGGAAGTCAAGCACTCCTTGCATCTCCATACACAATTGCCATCAGATGCAGAATGGTGTGGCACTaGTTTCAACCATTATATTTA | + |
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Preference number: 2 (lower is better) Translates to: RKGSQALLASPYTIAIRCRMVWH*FQPLYL Trigger: TAAATATAATGGTTGAAACCAGTGCCACACCATTCT...GCATCTGATGGCAATTGTGTATGGAGATGCAAGGAGTGCTTGACTTCCTTTCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR TCA 90 bp | AGGAAAGGAAGTCAAGCACTCCTTGCATCTCCATACACAATTGCCATCAGATGCGGTACTTGGCTTCGTTaGATGTGTCAGGCAGATTCC | + |
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Preference number: 4 (lower is better) Translates to: RKGSQALLASPYTIAIRCGTWLR*MCQADS Trigger: GGAATCTGCCTGACACATTCAACGAAGCCAAGTACC...GCATCTGATGGCAATTGTGTATGGAGATGCAAGGAGTGCTTGACTTCCTTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CCA 90 bp | AGGAAAGGAAGTCAAGCACTCCTTGCATCTCCATACACAATTGCCATCAGATGCTATGGGTCAATTTCATaGGGAACATGGTCATGTGTG | + |
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Preference number: 4 (lower is better) Translates to: RKGSQALLASPYTIAIRCYGSIS*GTWSCV Trigger: CACACATGACCATGTTCCCCATGAAATTGACCCATA...GCATCTGATGGCAATTGTGTATGGAGATGCAAGGAGTGCTTGACTTCCTTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR GCA 90 bp | AGGAAAGGAAGTCAAGCACTCCTTGCATCTCCATACACAATTGCCATCAGATGCGAACAAAGTTCCAAATaGTGTTTGCTGCAAGATGCA | + |
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Preference number: 4 (lower is better) Translates to: RKGSQALLASPYTIAIRCEQSSK*CLLQDA Trigger: TGCATCTTGCAGCAAACAGCATTTGGAACTTTGTTC...GCATCTGATGGCAATTGTGTATGGAGATGCAAGGAGTGCTTGACTTCCTTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CCA 90 bp | AGGAAAGGAAGTCAAGCACTCCTTGCATCTCCATACACAATTGCCATCAGATGCATCCTGGAAAAAGTATaGGTCAATTTCATGGGGAAC | + |
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Preference number: 4 (lower is better) Translates to: RKGSQALLASPYTIAIRCILEKV*VNFMGN Trigger: GTTCCCCATGAAATTGACCCATACTTTTTCCAGGAT...GCATCTGATGGCAATTGTGTATGGAGATGCAAGGAGTGCTTGACTTCCTTTCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CCA 90 bp | AGGAAAGGAAGTCAAGCACTCCTTGCATCTCCATACACAATTGCCATCAGATGCATCCAAGAGTTGTGTTaGGTAGAAGATGAGGATTTC | + |
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Preference number: 4 (lower is better) Translates to: RKGSQALLASPYTIAIRCIQELC*VEDEDF Trigger: GAAATCCTCATCTTCTACCCAACACAACTCTTGGAT...GCATCTGATGGCAATTGTGTATGGAGATGCAAGGAGTGCTTGACTTCCTTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CCA 90 bp | AGGAAAGGAAGTCAAGCACTCCTTGCATCTCCATACACAATTGCCATCAGATGCGTCTCCATTGGCATATaGTTGTGTCTGTATTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: RKGSQALLASPYTIAIRCVSIGI*LCLYLL Trigger: CAACAAATACAGACACAACCATATGCCAATGGAGAC...GCATCTGATGGCAATTGTGTATGGAGATGCAAGGAGTGCTTGACTTCCTTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CCA 90 bp | AGGAAAGGAAGTCAAGCACTCCTTGCATCTCCATACACAATTGCCATCAGATGCTTGATCAATAAAAGGTaGAGAGGTAGCCAGCCATAT | + |
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Preference number: 4 (lower is better) Translates to: RKGSQALLASPYTIAIRCLINKR*RGSQPY Trigger: ATATGGCTGGCTACCTCTCCACCTTTTATTGATCAA...GCATCTGATGGCAATTGTGTATGGAGATGCAAGGAGTGCTTGACTTCCTTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR TCA 90 bp | ATATCAGTACGTTGCAGGCAGAAGAAGACAGATATCCATAACTTCATACCACAACCCATGATGTTCCAGTaGGTGCTGCAGGTAAATTTC | + |
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Preference number: 4 (lower is better) Translates to: ISVRCRQKKTDIHNFIPQPMMFQ*VLQVNF Trigger: GAAATTTACCTGCAGCACTCACTGGAACATCATGGG...TTGTGGTATGAAGTTATGGATATCTGTCTTCTTCTGCCTGCAACGTACTGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR TCA 90 bp | ATATCAGTACGTTGCAGGCAGAAGAAGACAGATATCCATAACTTCATACCACAAGATAAGGACAACTGTTaGCCCTGGGGAGAATTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: ISVRCRQKKTDIHNFIPQDKDNC*PWGEFG Trigger: TCCAAATTCTCCCCAGGGTCAACAGTTGTCCTTATC...TTGTGGTATGAAGTTATGGATATCTGTCTTCTTCTGCCTGCAACGTACTGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR GCA 90 bp | ATATCAGTACGTTGCAGGCAGAAGAAGACAGATATCCATAACTTCATACCACAAAGAAAAGGGAGGATCTaGCAGGGCAAGAATGCCATT | + |
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Preference number: 4 (lower is better) Translates to: ISVRCRQKKTDIHNFIPQRKGRI*QGKNAI Trigger: AATGGCATTCTTGCCCTGGCAGATCCTCCCTTTTCT...TTGTGGTATGAAGTTATGGATATCTGTCTTCTTCTGCCTGCAACGTACTGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR GCA 90 bp | ATATCCATAACTTCATACCACAATTGTCAACTTATTGGACAGCAGGCCAATAAACTGTTTGCTGCAAGATaGAGGTGGCTGTGTTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: ISITSYHNCQLIGQQANKLFAAR*RWLCWA Trigger: AGCCCAACACAGCCACCTGCATCTTGCAGCAAACAG...TTTATTGGCCTGCTGTCCAATAAGTTGACAATTGTGGTATGAAGTTATGGATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR GCA 90 bp | ATATCCATAACTTCATACCACAATTGTCAACTTATTGGACAGCAGGCCAATAAATTGATTGCTCAACCCTaGGAGCCAAAGAAAGGGACC | + |
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Preference number: 4 (lower is better) Translates to: ISITSYHNCQLIGQQANKLIAQP*EPKKGT Trigger: GGTCCCTTTCTTTGGCTCGCAGGGTTGAGCAATCAA...TTTATTGGCCTGCTGTCCAATAAGTTGACAATTGTGGTATGAAGTTATGGATAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR GCA 90 bp | GTCAACTTATTGGACAGCAGGCCAATAAAAATACAAAGTGAGATCAAATTACAGCCAAATGCTGTTTGCTaGAAGATGCAGGTGGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VNLLDSRPIKIQSEIKLQPNAVC*KMQVAV Trigger: CACAGCCACCTGCATCTTGCAGCAAACAGCATTTGG...CTGTAATTTGATCTCACTTTGTATTTTTATTGGCCTGCTGTCCAATAAGTTGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CCA 90 bp | ATATCAGTACGTTGCAGGCAGAAGAAGACAGATATCCATAACTTCATACCACAACCATTCCGTCTCCATTaGCATATGGTTGTGTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: ISVRCRQKKTDIHNFIPQPFRLH*HMVVSV Trigger: TACAGACACAACCATATGCCAATGGAGACGGAATGG...TTGTGGTATGAAGTTATGGATATCTGTCTTCTTCTGCCTGCAACGTACTGATAT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR TCA 90 bp | GTCAACTTATTGGACAGCAGGCCAATAAAAATACAAAGTGAGATCAAATTACAGTACCTGCATGCTGAATaGCAGGTACTTGGCTTCGTT | + |
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Preference number: 4 (lower is better) Translates to: VNLLDSRPIKIQSEIKLQYLHAE*QVLGFV Trigger: AACGAAGCCAAGTACCTGTCATTCAGCATGCAGGTA...CTGTAATTTGATCTCACTTTGTATTTTTATTGGCCTGCTGTCCAATAAGTTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR GCA 90 bp | GTCAACTTATTGGACAGCAGGCCAATAAAAATACAAAGTGAGATCAAATTACAGGTTCCAAATGCTGTTTaGTGCAAGATGCAGGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: VNLLDSRPIKIQSEIKLQVPNAV*CKMQVA Trigger: AGCCACCTGCATCTTGCAGCAAACAGCATTTGGAAC...CTGTAATTTGATCTCACTTTGTATTTTTATTGGCCTGCTGTCCAATAAGTTGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CCA 90 bp | ATATCAGTACGTTGCAGGCAGAAGAAGACAGATATCCATAACTTCATACCACAAGGTCAAAAATGTGTCTaGGCAGTAAGTCCAAAGATG | + |
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Preference number: 4 (lower is better) Translates to: ISVRCRQKKTDIHNFIPQGQKCV*AVSPKM Trigger: CATCTTTGGACTTACTGCCCAGACACATTTTTGACC...TTGTGGTATGAAGTTATGGATATCTGTCTTCTTCTGCCTGCAACGTACTGATAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CCA 90 bp | ATATCAGTACGTTGCAGGCAGAAGAAGACAGATATCCATAACTTCATACCACAATGTCAGGCAGATTCCTaGATAAGAAAGCCATACTGT | + |
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Preference number: 4 (lower is better) Translates to: ISVRCRQKKTDIHNFIPQCQADS*IRKPYC Trigger: ACAGTATGGCTTTCTTATCCAGGAATCTGCCTGACA...TTGTGGTATGAAGTTATGGATATCTGTCTTCTTCTGCCTGCAACGTACTGATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CCA 90 bp | ATATCAGTACGTTGCAGGCAGAAGAAGACAGATATCCATAACTTCATACCACAACAAGGAGTGCTATACTaGAAGCCAAGACAGAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: ISVRCRQKKTDIHNFIPQQGVLY*KPRQRK Trigger: TTTTCTCTGTCTTGGCTTCCAGTATAGCACTCCTTG...TTGTGGTATGAAGTTATGGATATCTGTCTTCTTCTGCCTGCAACGTACTGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CCA 90 bp | ATATCCATAACTTCATACCACAATTGTCAACTTATTGGACAGCAGGCCAATAAAAGCTCTCTTCACTCATaGCTGGGTCAAAAATGTGTC | + |
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Preference number: 4 (lower is better) Translates to: ISITSYHNCQLIGQQANKSSLHS*LGQKCV Trigger: GACACATTTTTGACCCAGCCATGAGTGAAGAGAGCT...TTTATTGGCCTGCTGTCCAATAAGTTGACAATTGTGGTATGAAGTTATGGATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CCA 90 bp | ATATCCATAACTTCATACCACAATTGTCAACTTATTGGACAGCAGGCCAATAAAGATTTCTGGAGGCAGTaGTTCTTCTCTGAGTTTGCA | + |
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Preference number: 4 (lower is better) Translates to: ISITSYHNCQLIGQQANKDFWRQ*FFSEFA Trigger: TGCAAACTCAGAGAAGAACCACTGCCTCCAGAAATC...TTTATTGGCCTGCTGTCCAATAAGTTGACAATTGTGGTATGAAGTTATGGATAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CCA 90 bp | ATATCCATAACTTCATACCACAATTGTCAACTTATTGGACAGCAGGCCAATAAAAAGCTCACAGATTTCTaGAGGCAGTGGTTCTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: ISITSYHNCQLIGQQANKKLTDF*RQWFFS Trigger: AGAGAAGAACCACTGCCTCCAGAAATCTGTGAGCTT...TTTATTGGCCTGCTGTCCAATAAGTTGACAATTGTGGTATGAAGTTATGGATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR GCA 90 bp | ATATCCATAACTTCATACCACAATTGTCAACTTATTGGACAGCAGGCCAATAAAACACAGAAGAATACCTaGATGCTGAATGACAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: ISITSYHNCQLIGQQANKTQKNT*MLNDRY Trigger: GTACCTGTCATTCAGCATGCAGGTATTCTTCTGTGT...TTTATTGGCCTGCTGTCCAATAAGTTGACAATTGTGGTATGAAGTTATGGATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR TCA 90 bp | ATATCCATAACTTCATACCACAATTGTCAACTTATTGGACAGCAGGCCAATAAATCACTGCACACAGACTaGGGAATTTTTGTAAACTGT | + |
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Preference number: 4 (lower is better) Translates to: ISITSYHNCQLIGQQANKSLHTD*GIFVNC Trigger: ACAGTTTACAAAAATTCCTCAGTCTGTGTGCAGTGA...TTTATTGGCCTGCTGTCCAATAAGTTGACAATTGTGGTATGAAGTTATGGATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR GCA 90 bp | GTCAACTTATTGGACAGCAGGCCAATAAAAATACAAAGTGAGATCAAATTACAGCTTGAATGTATTTTGTaGCTGATGTCAAGACGTGAG | + |
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Preference number: 4 (lower is better) Translates to: VNLLDSRPIKIQSEIKLQLECIL*LMSRRE Trigger: CTCACGTCTTGACATCAGGCACAAAATACATTCAAG...CTGTAATTTGATCTCACTTTGTATTTTTATTGGCCTGCTGTCCAATAAGTTGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CCA 90 bp | ATATCAGTACGTTGCAGGCAGAAGAAGACAGATATCCATAACTTCATACCACAATGTGTGAACATATCCTaGAAAAAGTATGGGTCAATT | + |
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Preference number: 4 (lower is better) Translates to: ISVRCRQKKTDIHNFIPQCVNIS*KKYGSI Trigger: AATTGACCCATACTTTTTCCAGGATATGTTCACACA...TTGTGGTATGAAGTTATGGATATCTGTCTTCTTCTGCCTGCAACGTACTGATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CCA 90 bp | ATATCAGTACGTTGCAGGCAGAAGAAGACAGATATCCATAACTTCATACCACAAAAATTATGTAGCACTTaGGGGCAAATATCAAAGCAA | + |
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Preference number: 4 (lower is better) Translates to: ISVRCRQKKTDIHNFIPQKLCST*GQISKQ Trigger: TTGCTTTGATATTTGCCCCCAAGTGCTACATAATTT...TTGTGGTATGAAGTTATGGATATCTGTCTTCTTCTGCCTGCAACGTACTGATAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR GCA 90 bp | GTCAACTTATTGGACAGCAGGCCAATAAAAATACAAAGTGAGATCAAATTACAGGGAAATCTCATTGTCTaGACAAGGAATGCAATCAAA | + |
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Preference number: 4 (lower is better) Translates to: VNLLDSRPIKIQSEIKLQGNLIV*TRNAIK Trigger: TTTGATTGCATTCCTTGTGCAGACAATGAGATTTCC...CTGTAATTTGATCTCACTTTGTATTTTTATTGGCCTGCTGTCCAATAAGTTGAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR GCA 90 bp | GTCAACTTATTGGACAGCAGGCCAATAAAAATACAAAGTGAGATCAAATTACAGAATATGAATTCCAGGTaGCAGGAATCATTTTCACAA | + |
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Preference number: 4 (lower is better) Translates to: VNLLDSRPIKIQSEIKLQNMNSR*QESFSQ Trigger: TTGTGAAAATGATTCCTGGCACCTGGAATTCATATT...CTGTAATTTGATCTCACTTTGTATTTTTATTGGCCTGCTGTCCAATAAGTTGAC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS TCA 90 bp | TGCAATCAAAGCAGCAGACAGCCTTCCCCTCCTGGGCAGCTTTCCTaGATCCAGGCCTACAGCTCTCACTGCACACAGACTGAGGAATTT | + |
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Preference number: 5 (lower is better) Translates to: CNQSSRQPSPPGQLS*IQAYSSHCTQTEEF Trigger: AAATTCCTCAGTCTGTGTGCAGTGAGAGCTGTAGGCCTGGATTCAGGAAAGCTGCCCAGGAGGGGAAGGCTGTCTGCTGCTTTGATTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS GCA 90 bp | CACAAAGACTACAAGAACCACAGCTGTGAGTACAGAGAAGTCCAGTaGTGTGATCGTGAGTCCCATCCCCAAGGGCTCTTCATAGGCCAA | + |
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Preference number: 5 (lower is better) Translates to: HKDYKNHSCEYREVQ*CDRESHPQGLFIGQ Trigger: TTGGCCTATGAAGAGCCCTTGGGGATGGGACTCACGATCACAGCACTGGACTTCTCTGTACTCACAGCTGTGGTTCTTGTAGTCTTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS TCA 90 bp | TCCCTCTGGGGTCATTTGGGACAATCAGACCCACCCAGGACCAGCTaGAATGAAGCATCAAAGACACTAAGGCCAGTGACAGATATGTGT | + |
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Preference number: 5 (lower is better) Translates to: SLWGHLGQSDPPRTS*NEASKTLRPVTDMC Trigger: ACACATATCTGTCACTGGCCTTAGTGTCTTTGATGCTTCATTTCAGCTGGTCCTGGGTGGGTCTGATTGTCCCAAATGACCCCAGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | AGGAAAGGAAGTCAAGCACTCCTTGCATCTCCATACACAATTGCCATCAGATGCGCCATTCCGTCTCCATaGGCATATGGTTGTGTCTGT | + |
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Preference number: 5 (lower is better) Translates to: RKGSQALLASPYTIAIRCAIPSP*AYGCVC Trigger: ACAGACACAACCATATGCCAATGGAGACGGAATGGC...GCATCTGATGGCAATTGTGTATGGAGATGCAAGGAGTGCTTGACTTCCTTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | AGGAAAGGAAGTCAAGCACTCCTTGCATCTCCATACACAATTGCCATCAGATGCCTGAGAACCCGATTATaGGCCTTGACAATGGGTGTG | + |
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Preference number: 5 (lower is better) Translates to: RKGSQALLASPYTIAIRCLRTRL*ALTMGV Trigger: CACACCCATTGTCAAGGCCAATAATCGGGTTCTCAG...GCATCTGATGGCAATTGTGTATGGAGATGCAAGGAGTGCTTGACTTCCTTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | ATATCCATAACTTCATACCACAATTGTCAACTTATTGGACAGCAGGCCAATAAATCCCTCTGGGGTCATTaGGGACAATCAGACCCACCC | + |
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Preference number: 5 (lower is better) Translates to: ISITSYHNCQLIGQQANKSLWGH*GQSDPP Trigger: GGGTGGGTCTGATTGTCCCAAATGACCCCAGAGGGA...TTTATTGGCCTGCTGTCCAATAAGTTGACAATTGTGGTATGAAGTTATGGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | AGGAAAGGAAGTCAAGCACTCCTTGCATCTCCATACACAATTGCCATCAGATGCTTGTGTCTGTATTTGTaGAACAGTCATCTCATGGAG | + |
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Preference number: 5 (lower is better) Translates to: RKGSQALLASPYTIAIRCLCLYL*NSHLME Trigger: CTCCATGAGATGACTGTTCAACAAATACAGACACAA...GCATCTGATGGCAATTGTGTATGGAGATGCAAGGAGTGCTTGACTTCCTTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | AGGAAAGGAAGTCAAGCACTCCTTGCATCTCCATACACAATTGCCATCAGATGCTCATTGGAAATCTCATaGTCTGCACAAGGAATGCAA | + |
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Preference number: 5 (lower is better) Translates to: RKGSQALLASPYTIAIRCSLEIS*SAQGMQ Trigger: TTGCATTCCTTGTGCAGACAATGAGATTTCCAATGA...GCATCTGATGGCAATTGTGTATGGAGATGCAAGGAGTGCTTGACTTCCTTTCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | ATATCAGTACGTTGCAGGCAGAAGAAGACAGATATCCATAACTTCATACCACAAAGTTCCAAATGCTGTTaGCTGCAAGATGCAGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: ISVRCRQKKTDIHNFIPQSSKCC*LQDAGG Trigger: GCCACCTGCATCTTGCAGCAAACAGCATTTGGAACT...TTGTGGTATGAAGTTATGGATATCTGTCTTCTTCTGCCTGCAACGTACTGATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | ATATCAGTACGTTGCAGGCAGAAGAAGACAGATATCCATAACTTCATACCACAACAAAGATGCATTGGGTaGGCAGTTCTCCAAAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: ISVRCRQKKTDIHNFIPQQRCIG*AVLQKL Trigger: CAACTTTTGGAGAACTGCCAACCCAATGCATCTTTG...TTGTGGTATGAAGTTATGGATATCTGTCTTCTTCTGCCTGCAACGTACTGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | ATATCCATAACTTCATACCACAATTGTCAACTTATTGGACAGCAGGCCAATAAAACCCGATTATTGGCCTaGACAATGGGTGTGTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: ISITSYHNCQLIGQQANKTRLLA*TMGVSL Trigger: CAGAGACACACCCATTGTCAAGGCCAATAATCGGGT...TTTATTGGCCTGCTGTCCAATAAGTTGACAATTGTGGTATGAAGTTATGGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | ATATCAGTACGTTGCAGGCAGAAGAAGACAGATATCCATAACTTCATACCACAACTGAATGACAGGTACTaGGCTTCGTTGAATGTGTCA | + |
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Preference number: 5 (lower is better) Translates to: ISVRCRQKKTDIHNFIPQLNDRY*ASLNVS Trigger: TGACACATTCAACGAAGCCAAGTACCTGTCATTCAG...TTGTGGTATGAAGTTATGGATATCTGTCTTCTTCTGCCTGCAACGTACTGATAT 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | ATATCCATAACTTCATACCACAATTGTCAACTTATTGGACAGCAGGCCAATAAAGACCCTGGGGAGAATTaGGAGAAAAGGTTCCTACTT | + |
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Preference number: 5 (lower is better) Translates to: ISITSYHNCQLIGQQANKDPGEN*EKRFLL Trigger: AAGTAGGAACCTTTTCTCCAAATTCTCCCCAGGGTC...TTTATTGGCCTGCTGTCCAATAAGTTGACAATTGTGGTATGAAGTTATGGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | ATATCCATAACTTCATACCACAATTGTCAACTTATTGGACAGCAGGCCAATAAAAAGTCCAAAGATGCATaGGGTTGGCAGTTCTCCAAA | + |
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Preference number: 5 (lower is better) Translates to: ISITSYHNCQLIGQQANKKSKDA*GWQFSK Trigger: TTTGGAGAACTGCCAACCCAATGCATCTTTGGACTT...TTTATTGGCCTGCTGTCCAATAAGTTGACAATTGTGGTATGAAGTTATGGATAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | GTCAACTTATTGGACAGCAGGCCAATAAAAATACAAAGTGAGATCAAATTACAGGGTTCTTCTCTGAGTTaGCATAGTGACTTTCTGGAC | + |
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Preference number: 5 (lower is better) Translates to: VNLLDSRPIKIQSEIKLQGSSLS*HSDFLD Trigger: GTCCAGAAAGTCACTATGCAAACTCAGAGAAGAACC...CTGTAATTTGATCTCACTTTGTATTTTTATTGGCCTGCTGTCCAATAAGTTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | GTCAACTTATTGGACAGCAGGCCAATAAAAATACAAAGTGAGATCAAATTACAGACCACTACAATAGCTTaGGCTAACACTGTGGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: VNLLDSRPIKIQSEIKLQTTTIA*ANTVER Trigger: TCTCTCCACAGTGTTAGCCAAAGCTATTGTAGTGGT...CTGTAATTTGATCTCACTTTGTATTTTTATTGGCCTGCTGTCCAATAAGTTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | ATATCCATAACTTCATACCACAATTGTCAACTTATTGGACAGCAGGCCAATAAAGCAGTTCTCCAAAAGTaGGCAATCAAACTCAGAAAA | + |
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Preference number: 5 (lower is better) Translates to: ISITSYHNCQLIGQQANKAVLQK*AIKLRK Trigger: TTTTCTGAGTTTGATTGCCAACTTTTGGAGAACTGC...TTTATTGGCCTGCTGTCCAATAAGTTGACAATTGTGGTATGAAGTTATGGATAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | ATATCCATAACTTCATACCACAATTGTCAACTTATTGGACAGCAGGCCAATAAATGGTTGTGTCTGTATTaGTTGAACAGTCATCTCATG | + |
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Preference number: 5 (lower is better) Translates to: ISITSYHNCQLIGQQANKWLCLY*LNSHLM Trigger: CATGAGATGACTGTTCAACAAATACAGACACAACCA...TTTATTGGCCTGCTGTCCAATAAGTTGACAATTGTGGTATGAAGTTATGGATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | GTCAACTTATTGGACAGCAGGCCAATAAAAATACAAAGTGAGATCAAATTACAGTCCATTGGCATATGGTaGTGTCTGTATTTGTTGAAC | + |
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Preference number: 5 (lower is better) Translates to: VNLLDSRPIKIQSEIKLQSIGIW*CLYLLN Trigger: GTTCAACAAATACAGACACAACCATATGCCAATGGA...CTGTAATTTGATCTCACTTTGTATTTTTATTGGCCTGCTGTCCAATAAGTTGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | GTCAACTTATTGGACAGCAGGCCAATAAAAATACAAAGTGAGATCAAATTACAGTCCATATCTGTCTCATaGGAAATCTCATTGTCTGCA | + |
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Preference number: 5 (lower is better) Translates to: VNLLDSRPIKIQSEIKLQSISVS*EISLSA Trigger: TGCAGACAATGAGATTTCCAATGAGACAGATATGGA...CTGTAATTTGATCTCACTTTGTATTTTTATTGGCCTGCTGTCCAATAAGTTGAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS-3UTR CAA 90 bp | ATATCCATAACTTCATACCACAATTGTCAACTTATTGGACAGCAGGCCAATAAACTTCTTGAATGTATTTaGTGCCTGATGTCAAGACGT | + |
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Preference number: 5 (lower is better) Translates to: ISITSYHNCQLIGQQANKLLECI*CLMSRR Trigger: ACGTCTTGACATCAGGCACAAAATACATTCAAGAAG...TTTATTGGCCTGCTGTCCAATAAGTTGACAATTGTGGTATGAAGTTATGGATAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS TCA 72 bp | GGTCATTTGGGACAATCAGACCCACCCAGGACCAGCTaGAATGAAGCATCAAAGACACTAAGGCCAGTGACA | + |
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Preference number: 6 (lower is better) Translates to: GHLGQSDPPRTS*NEASKTLRPVT Trigger: TGTCACTGGCCTTAGTGTCTTTGATGCTTCATTTCAGCTGGTCCTGGGTGGGTCTGATTGTCCCAAATGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS CCA 72 bp | AGCTCTCTTCACTCATGGCTGGGTCAAAAATGTGTCTaGGCAGTAAGTCCAAAGATGCATTGGGTTGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: SSLHSWLGQKCV*AVSPKMHWVGS Trigger: ACTGCCAACCCAATGCATCTTTGGACTTACTGCCCAGACACATTTTTGACCCAGCCATGAGTGAAGAGAGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS TCA 72 bp | TTTGGGACAATCAGACCCACCCAGGACCAGCTGAAATaGAGCATCAAAGACACTAAGGCCAGTGACAGATAT | + |
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Preference number: 6 (lower is better) Translates to: FGTIRPTQDQLK*SIKDTKASDRY Trigger: ATATCTGTCACTGGCCTTAGTGTCTTTGATGCTTCATTTCAGCTGGTCCTGGGTGGGTCTGATTGTCCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS CAA 72 bp | TCCGTCTCCATTGGCATATGGTTGTGTCTGTATTTGTaGAACAGTCATCTCATGGAGGCTGTGAGCAAGAGC | + |
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Preference number: 6 (lower is better) Translates to: SVSIGIWLCLYL*NSHLMEAVSKS Trigger: GCTCTTGCTCACAGCCTCCATGAGATGACTGTTCAACAAATACAGACACAACCATATGCCAATGGAGACGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS GCA 72 bp | TTTTTAAGTAGGGTGATCTTTAGAAAAGGGAGGATCTaGCAGGGCAAGAATGCCATTCCGTCTCCATTGGCA | + |
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Preference number: 6 (lower is better) Translates to: FLSRVIFRKGRI*QGKNAIPSPLA Trigger: TGCCAATGGAGACGGAATGGCATTCTTGCCCTGGCAGATCCTCCCTTTTCTAAAGATCACCCTACTTAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS GCA 72 bp | GAAGCAAAGGTATCCCAGTACACAGTGGAAAGCAACTaGAGAACCCTTGTTGCACATAATGATGATGTGACC | + |
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Preference number: 6 (lower is better) Translates to: EAKVSQYTVESN*RTLVAHNDDVT Trigger: GGTCACATCATCATTATGTGCAACAAGGGTTCTGCAGTTGCTTTCCACTGTGTACTGGGATACCTTTGCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS CCA 72 bp | ACACAGCATTGTATAGGTTGTAGCTCTCTTCACTCATaGCTGGGTCAAAAATGTGTCTGGGCAGTAAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: TQHCIGCSSLHS*LGQKCVWAVSP Trigger: TGGACTTACTGCCCAGACACATTTTTGACCCAGCCATGAGTGAAGAGAGCTACAACCTATACAATGCTGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS CCA 72 bp | CCAAGTGCTAAGAAGCAAAGGTATCCCAGTACACAGTaGAAAGCAACTGCAGAACCCTTGTTGCACATAATG | + |
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Preference number: 6 (lower is better) Translates to: PSAKKQRYPSTQ*KATAEPLLHIM Trigger: CATTATGTGCAACAAGGGTTCTGCAGTTGCTTTCCACTGTGTACTGGGATACCTTTGCTTCTTAGCACTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS CAA 72 bp | GGGCAAGAATGCCATTCCGTCTCCATTGGCATATGGTaGTGTCTGTATTTGTTGAACAGTCATCTCATGGAG | + |
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Preference number: 6 (lower is better) Translates to: GQECHSVSIGIW*CLYLLNSHLME Trigger: CTCCATGAGATGACTGTTCAACAAATACAGACACAACCATATGCCAATGGAGACGGAATGGCATTCTTGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS CAA 72 bp | TCACAGATTTCTGGAGGCAGTGGTTCTTCTCTGAGTTaGCATAGTGACTTTCTGGACACTGCACACACTGAT | + |
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Preference number: 6 (lower is better) Translates to: SQISGGSGSSLS*HSDFLDTAHTD Trigger: ATCAGTGTGTGCAGTGTCCAGAAAGTCACTATGCAAACTCAGAGAAGAACCACTGCCTCCAGAAATCTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS CCA 72 bp | GGAGAGGTAGCCAGCCATATTCCACAGATAATAAGTTaGATCAGTGTGCAGATGGGAATAATGGAATTTGGG | + |
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Preference number: 6 (lower is better) Translates to: GEVASHIPQIIS*ISVQMGIMEFG Trigger: CCCAAATTCCATTATTCCCATCTGCACACTGATCCAACTTATTATCTGTGGAATATGGCTGGCTACCTCTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS GCA 72 bp | CTGATCCATATCTGTCTCATTGGAAATCTCATTGTCTaGACAAGGAATGCAATCAAAGCAGCAGACAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: LIHICLIGNLIV*TRNAIKAADSL Trigger: AAGGCTGTCTGCTGCTTTGATTGCATTCCTTGTGCAGACAATGAGATTTCCAATGAGACAGATATGGATCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS GCA 72 bp | TATGTAGCACTTGGGGGCAAATATCAAAGCAAGGAGTaGTATACTGGAAGCCAAGACAGAGAAAACTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: YVALGGKYQSKE*YTGSQDRENFH Trigger: ATGGAAGTTTTCTCTGTCTTGGCTTCCAGTATAGCACTCCTTGCTTTGATATTTGCCCCCAAGTGCTACATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS CCA 72 bp | CAAAAATGTGTCTGGGCAGTAAGTCCAAAGATGCATTaGGTTGGCAGTTCTCCAAAAGTTGGCAATCAAACT | + |
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Preference number: 6 (lower is better) Translates to: QKCVWAVSPKMH*VGSSPKVGNQT Trigger: AGTTTGATTGCCAACTTTTGGAGAACTGCCAACCCAATGCATCTTTGGACTTACTGCCCAGACACATTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS CAA 72 bp | TCAAAAATGTGTCTGGGCAGTAAGTCCAAAGATGCATaGGGTTGGCAGTTCTCCAAAAGTTGGCAATCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SKMCLGSKSKDA*GWQFSKSWQSN Trigger: GTTTGATTGCCAACTTTTGGAGAACTGCCAACCCAATGCATCTTTGGACTTACTGCCCAGACACATTTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS CAA 72 bp | GTCCAAAGATGCATTGGGTTGGCAGTTCTCCAAAAGTaGGCAATCAAACTCAGAAAAAGAGCACTTGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: VQRCIGLAVLQK*AIKLRKRALEE Trigger: TTCTTCAAGTGCTCTTTTTCTGAGTTTGATTGCCAACTTTTGGAGAACTGCCAACCCAATGCATCTTTGGAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS CAA 72 bp | CCTCAGATAAGGACAACTGTTGACCCTGGGGAGAATTaGGAGAAAAGGTTCCTACTTTCATCTTTAATCCAA | + |
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Preference number: 6 (lower is better) Translates to: PQIRTTVDPGEN*EKRFLLSSLIQ Trigger: TTGGATTAAAGATGAAAGTAGGAACCTTTTCTCCAAATTCTCCCCAGGGTCAACAGTTGTCCTTATCTGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS CCA 72 bp | TCCAAAGATGCATTGGGTTGGCAGTTCTCCAAAAGTTaGCAATCAAACTCAGAAAAAGAGCACTTGAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SKDALGWQFSKS*QSNSEKEHLKK Trigger: TTTCTTCAAGTGCTCTTTTTCTGAGTTTGATTGCCAACTTTTGGAGAACTGCCAACCCAATGCATCTTTGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS CAA 72 bp | CATAATGATGATGTGACCATGTTCAACATGAGCATTTaGATCAATAAAAGGTGGAGAGGTAGCCAGCCATAT | + |
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Preference number: 6 (lower is better) Translates to: HNDDVTMFNMSI*INKRWRGSQPY Trigger: ATATGGCTGGCTACCTCTCCACCTTTTATTGATCAAAATGCTCATGTTGAACATGGTCACATCATCATTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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| CDS CAA 72 bp | ATAATCATCTTCAGGGTATGTGTAGGGATTCACTGTTaGAACAAAATTCACAAACTCAACCATCTCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: IIIFRVCVGIHC*NKIHKLNHLFM Trigger: CATGAAGAGATGGTTGAGTTTGTGAATTTTGTTCAAACAGTGAATCCCTACACATACCCTGAAGATGATTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000169130.3 |
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