RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN2R61 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000090967

Ensembl transcript IDs: ENSMUST00000166131.2

Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp TTTGGCCAACACTGTGGAGAGAGACACAGTGAACAAAATTCCAAATaGTGTCTGCTGCAAGATGCAGGTGGTTGTGTTGGGCTGGCCAAC +
Preference number: 5 (lower is better)
Translates to: FGQHCGERHSEQNSK*CLLQDAGGCVGLAN
Trigger: GTTGGCCAGCCCAACACAACCACCTGCATCTTGCAGCAGACAGCATTTGGAATTTTGTTCACTGTGTCTCTCTCCACAGTGTTGGCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS GCA 90 bp AACACTGTGGAGAGAGACACAGTGAACAAAATTCCAAATGCTGTCTaGTGCAAGATGCAGGTGGTTGTGTTGGGCTGGCCAACAAACAGC +
Preference number: 5 (lower is better)
Translates to: NTVERDTVNKIPNAV*CKMQVVVLGWPTNS
Trigger: GCTGTTTGTTGGCCAGCCCAACACAACCACCTGCATCTTGCAGCAGACAGCATTTGGAATTTTGTTCACTGTGTCTCTCTCCACAGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS TCA 90 bp TCCCTCTGTGATCATCTGGGAGGATCAGACCAACCCAGTACCATCTaGAATGAAGCATCAAAAGCACTATGGCAAGTGACAGAGATGTGT +
Preference number: 5 (lower is better)
Translates to: SLCDHLGGSDQPSTI*NEASKALWQVTEMC
Trigger: ACACATCTCTGTCACTTGCCATAGTGCTTTTGATGCTTCATTTCAGATGGTACTGGGTTGGTCTGATCCTCCCAGATGATCACAGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS CCA 90 bp ATATATTGTAGCCTTCCTCACTCATGGCTGGGTCAAAAAGGTGTCTaGGAAGTAAATCCAAAGAAGCATTGGGTTGGCAGTTCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: IYCSLPHSWLGQKGV*EVNPKKHWVGSSPK
Trigger: TTTTGGAGAACTGCCAACCCAATGCTTCTTTGGATTTACTTCCCAGACACCTTTTTGACCCAGCCATGAGTGAGGAAGGCTACAATATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS CCA 90 bp CAACAGCATACACAGCATTGTATATATTGTAGCCTTCCTCACTCATaGCTGGGTCAAAAAGGTGTCTGGGAAGTAAATCCAAAGAAGCAT +
Preference number: 5 (lower is better)
Translates to: QQHTQHCIYCSLPHS*LGQKGVWEVNPKKH
Trigger: ATGCTTCTTTGGATTTACTTCCCAGACACCTTTTTGACCCAGCCATGAGTGAGGAAGGCTACAATATATACAATGCTGTGTATGCTGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS CCA 90 bp GTGAAGCTGCCAGGGGGAGAATACCATTTCTTCTCCATTTGCATATaGTTGGGTCTGTATTTGTTGAAGATTCATCTCATGGACACTATA +
Preference number: 5 (lower is better)
Translates to: VKLPGGEYHFFSICI*LGLYLLKIHLMDTI
Trigger: TATAGTGTCCATGAGATGAATCTTCAACAAATACAGACCCAACCATATGCAAATGGAGAAGAAATGGTATTCTCCCCCTGGCAGCTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS CCA 72 bp CCAAGTGCTAAGGAGCAGAGGTACCCCAGGACAGTGTaGAAGGCAACTGTTGAACCCATGTTGCACACAATG +
Preference number: 6 (lower is better)
Translates to: PSAKEQRYPRTV*KATVEPMLHTM
Trigger: CATTGTGTGCAACATGGGTTCAACAGTTGCCTTCCACACTGTCCTGGGGTACCTCTGCTCCTTAGCACTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS CAA 72 bp TCTGCACAGGGAATACAATCAAAGCAGCAGACAGCCTaGCCTTCCTGGGCAGCTTTCCTGAATCCAGGCCTA +
Preference number: 6 (lower is better)
Translates to: SAQGIQSKQQTA*PSWAAFLNPGL
Trigger: TAGGCCTGGATTCAGGAAAGCTGCCCAGGAAGGCAAGGCTGTCTGCTGCTTTGATTGTATTCCCTGTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS CCA 72 bp GGAATACAATCAAAGCAGCAGACAGCCTTGCCTTCCTaGGCAGCTTTCCTGAATCCAGGCCTACAGATCTCA +
Preference number: 6 (lower is better)
Translates to: GIQSKQQTALPS*AAFLNPGLQIS
Trigger: TGAGATCTGTAGGCCTGGATTCAGGAAAGCTGCCCAGGAAGGCAAGGCTGTCTGCTGCTTTGATTGTATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS GCA 72 bp GAGAGAGACACAGTGAACAAAATTCCAAATGCTGTCTaGTGCAAGATGCAGGTGGTTGTGTTGGGCTGGCCA +
Preference number: 6 (lower is better)
Translates to: ERDTVNKIPNAV*CKMQVVVLGWP
Trigger: TGGCCAGCCCAACACAACCACCTGCATCTTGCAGCAGACAGCATTTGGAATTTTGTTCACTGTGTCTCTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS GCA 72 bp CACTGTGGAGAGAGACACAGTGAACAAAATTCCAAATaGTGTCTGCTGCAAGATGCAGGTGGTTGTGTTGGG +
Preference number: 6 (lower is better)
Translates to: HCGERHSEQNSK*CLLQDAGGCVG
Trigger: CCCAACACAACCACCTGCATCTTGCAGCAGACAGCATTTGGAATTTTGTTCACTGTGTCTCTCTCCACAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS CCA 72 bp AGCCTTCCTCACTCATGGCTGGGTCAAAAAGGTGTCTaGGAAGTAAATCCAAAGAAGCATTGGGTTGGCAGT +
Preference number: 6 (lower is better)
Translates to: SLPHSWLGQKGV*EVNPKKHWVGS
Trigger: ACTGCCAACCCAATGCTTCTTTGGATTTACTTCCCAGACACCTTTTTGACCCAGCCATGAGTGAGGAAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS CCA 72 bp ACAAAATTCCAAATGCTGTCTGCTGCAAGATGCAGGTaGTTGTGTTGGGCTGGCCAACAAACAGCAAGGAAC +
Preference number: 6 (lower is better)
Translates to: TKFQMLSAARCR*LCWAGQQTARN
Trigger: GTTCCTTGCTGTTTGTTGGCCAGCCCAACACAACCACCTGCATCTTGCAGCAGACAGCATTTGGAATTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS TCA 72 bp TCTGGGAGGATCAGACCAACCCAGTACCATCTGAAATaGAGCATCAAAAGCACTATGGCAAGTGACAGAGAT +
Preference number: 6 (lower is better)
Translates to: SGRIRPTQYHLK*SIKSTMASDRD
Trigger: ATCTCTGTCACTTGCCATAGTGCTTTTGATGCTTCATTTCAGATGGTACTGGGTTGGTCTGATCCTCCCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS CAA 90 bp GGAAAGGGTGAAGCTGCCAGGGGGAGAATACCATTTCTTCTCCATTaGCATATGGTTGGGTCTGTATTTGTTGAAGATTCATCTCATGGA +
Preference number: 6 (lower is better)
Translates to: GKGEAARGRIPFLLH*HMVGSVFVEDSSHG
Trigger: TCCATGAGATGAATCTTCAACAAATACAGACCCAACCATATGCAAATGGAGAAGAAATGGTATTCTCCCCCTGGCAGCTTCACCCTTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS GCA 72 bp CCATCTCACCATTCTAGCTGGAACAATGGCCTTGAATaGAATAACCACTGTAATAGCTTTGGCCAACACTGT +
Preference number: 6 (lower is better)
Translates to: PSHHSSWNNGLE*NNHCNSFGQHC
Trigger: ACAGTGTTGGCCAAAGCTATTACAGTGGTTATTGCATTCAAGGCCATTGTTCCAGCTAGAATGGTGAGATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS GCA 72 bp TTGATCCACATCTGTATCGTTGGAAATCTCATTGTCTaGACAGGGAATACAATCAAAGCAGCAGACAGCCTT +
Preference number: 6 (lower is better)
Translates to: LIHICIVGNLIV*TGNTIKAADSL
Trigger: AAGGCTGTCTGCTGCTTTGATTGTATTCCCTGTGCAGACAATGAGATTTCCAACGATACAGATGTGGATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS GCA 72 bp AATGTAGCACTTGGGAGCAAAATTCAATCCAAGGAGTaGTATACTGGAAGCCAAGATGGAGAACACTTCCAT +
Preference number: 6 (lower is better)
Translates to: NVALGSKIQSKE*YTGSQDGEHFH
Trigger: ATGGAAGTGTTCTCCATCTTGGCTTCCAGTATAGCACTCCTTGGATTGAATTTTGCTCCCAAGTGCTACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS CCA 72 bp ACACAGCATTGTATATATTGTAGCCTTCCTCACTCATaGCTGGGTCAAAAAGGTGTCTGGGAAGTAAATCCA +
Preference number: 6 (lower is better)
Translates to: TQHCIYCSLPHS*LGQKGVWEVNP
Trigger: TGGATTTACTTCCCAGACACCTTTTTGACCCAGCCATGAGTGAGGAAGGCTACAATATATACAATGCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS CAA 72 bp ACAATGGCCTTGAATGCAATAACCACTGTAATAGCTTaGGCCAACACTGTGGAGAGAGACACAGTGAACAAA +
Preference number: 6 (lower is better)
Translates to: TMALNAITTVIA*ANTVERDTVNK
Trigger: TTTGTTCACTGTGTCTCTCTCCACAGTGTTGGCCAAAGCTATTACAGTGGTTATTGCATTCAAGGCCATTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS CAA 90 bp CTAGCTGGAACAATGGCCTTGAATGCAATAACCACTGTAATAGCTTaGGCCAACACTGTGGAGAGAGACACAGTGAACAAAATTCCAAAT +
Preference number: 6 (lower is better)
Translates to: LAGTMALNAITTVIA*ANTVERDTVNKIPN
Trigger: ATTTGGAATTTTGTTCACTGTGTCTCTCTCCACAGTGTTGGCCAAAGCTATTACAGTGGTTATTGCATTCAAGGCCATTGTTCCAGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS GCA 72 bp AAGCTGCCAGGGGGAGAATACCATTTCTTCTCCATTTaGATATGGTTGGGTCTGTATTTGTTGAAGATTCAT +
Preference number: 6 (lower is better)
Translates to: KLPGGEYHFFSI*IWLGLYLLKIH
Trigger: ATGAATCTTCAACAAATACAGACCCAACCATATGCAAATGGAGAAGAAATGGTATTCTCCCCCTGGCAGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS CCA 72 bp CCAGGGGGAGAATACCATTTCTTCTCCATTTGCATATaGTTGGGTCTGTATTTGTTGAAGATTCATCTCATG +
Preference number: 6 (lower is better)
Translates to: PGGEYHFFSICI*LGLYLLKIHLM
Trigger: CATGAGATGAATCTTCAACAAATACAGACCCAACCATATGCAAATGGAGAAGAAATGGTATTCTCCCCCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS CAA 72 bp ATTAACCATCTCACCATTCTAGCTGGAACAATGGCCTaGAATGCAATAACCACTGTAATAGCTTTGGCCAAC +
Preference number: 6 (lower is better)
Translates to: INHLTILAGTMA*NAITTVIALAN
Trigger: GTTGGCCAAAGCTATTACAGTGGTTATTGCATTCAAGGCCATTGTTCCAGCTAGAATGGTGAGATGGTTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2
CDS CAA 72 bp ATAATTGTCCTCTGGGTATTTGTAGGGATTAACTGTTaGGACAAACTTCATAAACTCAACCATGTCTTCATG +
Preference number: 6 (lower is better)
Translates to: IIVLWVFVGINC*DKLHKLNHVFM
Trigger: CATGAAGACATGGTTGAGTTTATGAAGTTTGTCCAAACAGTTAATCCCTACAAATACCCAGAGGACAATTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000166131.2