Pregenerated sensors for VMN2R60 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090619Ensembl transcript IDs: ENSMUST00000166447.3, ENSMUST00000233771.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAATAAGACATTTACAATaGTGTGCCATTGGCTTAACC | + |
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Preference number: 2 (lower is better) Translates to: QNESNVIDLQSSNFYAKEIRHLQ*CAIGLT Trigger: GGTTAAGCCAATGGCACAGCATTGTAAATGTCTTAT...TTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| 3UTR-3UTR GCA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGATAAGACATTTACAATaGTGTGCCATTGGCTTAACC | + |
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Preference number: 2 (lower is better) Translates to: VQNESNVIDLQSSNFYAKIRHLQ*CAIGLT Trigger: GGTTAAGCCAATGGCACAGCATTGTAAATGTCTTAT...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR GCA 90 bp | CAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAACTGCCAGGGGGAGAATaGCATTTCTTCTCCATTGGC | + |
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Preference number: 4 (lower is better) Translates to: QNESNVIDLQSSNFYAKELPGGE*HFFSIG Trigger: GCCAATGGAGAAGAAATGGCATTCTCCCCCTGGCAG...TTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | CAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAATTCTTTAGGAAAGGGTaGAGCTGCCAGGGGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: QNESNVIDLQSSNFYAKEFFRKG*SCQGEN Trigger: ATTCTCCCCCTGGCAGCTTCACCCTTTCCTAAAGAA...TTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | AATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAAGCATAGCAGGATGTAGCTaGGAGTCCTGTTATTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: NESNVIDLQSSNFYAKESIAGCS*ESCYWP Trigger: AGGCCAATAACAGGACTCTCAGCTACATCCTGCTAT...GCTTTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR GCA 90 bp | CAGAGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCCTGCCAGGGGGAGAATaGCATTTCTTCTCCATTGGC | + |
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Preference number: 4 (lower is better) Translates to: QSSNFYAKESTLYPSVHALPGGE*HFFSIG Trigger: GCCAATGGAGAAGAAATGGCATTCTCCCCCTGGCAG...GGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACTCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR GCA 90 bp | AATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAAGCTGCTATGATGGTGAGTaGCATTCCCAAAGGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: NESNVIDLQSSNFYAKESCYDGE*HSQRLF Trigger: GAAGAGCCTTTGGGAATGGCACTCACCATCATAGCA...GCTTTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CCA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGGCATAGTGACTTTCTaGACACTGCACACACTGCTC | + |
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Preference number: 4 (lower is better) Translates to: VQNESNVIDLQSSNFYAKGIVTF*TLHTLL Trigger: GAGCAGTGTGTGCAGTGTCCAGAAAGTCACTATGCC...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | CAGAGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCTTCTTTAGGAAAGGGTaGAGCTGCCAGGGGGAGAAT | + |
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Preference number: 4 (lower is better) Translates to: QSSNFYAKESTLYPSVHAFFRKG*SCQGEN Trigger: ATTCTCCCCCTGGCAGCTTCACCCTTTCCTAAAGAA...GGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR GCA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGAAGTTTCTTCCCCCATaGGTTACTGTGTCTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: VQNESNVIDLQSSNFYAKKFLPP*VTVSPL Trigger: GAGAGGAGACACAGTAACGCATGGGGGAAGAAACTT...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CCA 90 bp | AATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAAGCAAAGACTATGGCAAATaGCAGAGATGTGTCTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: NESNVIDLQSSNFYAKESKDYGK*QRCVFG Trigger: CCCGAAGACACATCTCTGCCATTTGCCATAGTCTTT...GCTTTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CCA 90 bp | CAGAGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCGGCATAGTGACTTTCTaGACACTGCACACACTGCTC | + |
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Preference number: 4 (lower is better) Translates to: QSSNFYAKESTLYPSVHAGIVTF*TLHTLL Trigger: GAGCAGTGTGTGCAGTGTCCAGAAAGTCACTATGCC...GGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACTCTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGCAACCCAGGACCAGCTaGAATGAAGCAACAAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: VQNESNVIDLQSSNFYAKQPRTS*NEATKR Trigger: TCTTTTTGTTGCTTCATTTCAGCTGGTCCTGGGTTG...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | CAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAACAACCCAGGACCAGCTaGAATGAAGCAACAAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: QNESNVIDLQSSNFYAKEQPRTS*NEATKR Trigger: TCTTTTTGTTGCTTCATTTCAGCTGGTCCTGGGTTG...TTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGAAGTCTGAAAGAATCTaGGTCCCTCTGTGGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: VQNESNVIDLQSSNFYAKKSERI*VPLWSS Trigger: AGATGACCACAGAGGGACTCAGATTCTTTCAGACTT...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGTCACTGCACACAGACTaGGGAATCTTTGTAAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: VQNESNVIDLQSSNFYAKSLHTD*GIFVNP Trigger: AGGGTTTACAAAGATTCCTCAGTCTGTGTGCAGTGA...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGCAGTGATTCTTCTCTaGGTTGGCATAGTGACTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VQNESNVIDLQSSNFYAKAVILL*VGIVTF Trigger: GAAAGTCACTATGCCAACTCAGAGAAGAATCACTGC...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | AATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAAGCCCTGTGTACAAAATATaGAGAGGGAAAAGTGCACCA | + |
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Preference number: 4 (lower is better) Translates to: NESNVIDLQSSNFYAKESPVYKI*RGKSAP Trigger: TGGTGCACTTTTCCCTCTTCATATTTTGTACACAGG...GCTTTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233771.2 |
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| CDS-3UTR GCA 90 bp | CAGAGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCTGCTATGATGGTGAGTaGCATTCCCAAAGGCTCTTC | + |
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Preference number: 4 (lower is better) Translates to: QSSNFYAKESTLYPSVHACYDGE*HSQRLF Trigger: GAAGAGCCTTTGGGAATGGCACTCACCATCATAGCA...GGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR GCA 90 bp | AATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAAGCGAACAAAATTCCAACTaGTGTCTGCTGCAAGATGCA | + |
|
Preference number: 4 (lower is better) Translates to: NESNVIDLQSSNFYAKESEQNSN*CLLQDA Trigger: TGCATCTTGCAGCAGACAGCAGTTGGAATTTTGTTC...GCTTTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CCA 90 bp | CAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAAAAGACTATGGCAAATaGCAGAGATGTGTCTTCGGG | + |
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Preference number: 4 (lower is better) Translates to: QNESNVIDLQSSNFYAKEKDYGK*QRCVFG Trigger: CCCGAAGACACATCTCTGCCATTTGCCATAGTCTTT...TTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CCA 90 bp | AATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAAGCCCATTTCTTCTCCATTaGCATATGGTTGGGTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: NESNVIDLQSSNFYAKESPFLLH*HMVGSV Trigger: TACAGACCCAACCATATGCCAATGGAGAAGAAATGG...GCTTTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CCA 90 bp | CAGAGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCGTGGTTGTGTTGGGCTaGCCAATAAACAGCAAGGAA | + |
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Preference number: 4 (lower is better) Translates to: QSSNFYAKESTLYPSVHAVVVLG*PINSKE Trigger: TTCCTTGCTGTTTATTGGCCAGCCCAACACAACCAC...GGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | GCACTTTATATCCATCTGTTCATGCCACAATTGTATAATTATGAGACTGTAGGCAAGTCTGAAAGAATCTaGGTCCCTCTGTGGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: ALYIHLFMPQLYNYETVGKSERI*VPLWSS Trigger: AGATGACCACAGAGGGACTCAGATTCTTTCAGACTT...GCCTACAGTCTCATAATTATACAATTGTGGCATGAACAGATGGATATAAAGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | AATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAAGCGCTATGCAGATACCATaGCTCTCCATATTTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: NESNVIDLQSSNFYAKESAMQIP*LSIFSL Trigger: AAGAGAAAATATGGAGAGTCATGGTATCTGCATAGC...GCTTTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | AATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAAGCTGGGTCTGTATTTGTTaGAGATTCATCTCATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: NESNVIDLQSSNFYAKESWVCIC*RFISWR Trigger: TCTCCATGAGATGAATCTTCAACAAATACAGACCCA...GCTTTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | CAGAGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCTCACTGCACACAGACTaGGGAATCTTTGTAAACCCT | + |
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Preference number: 4 (lower is better) Translates to: QSSNFYAKESTLYPSVHASLHTD*GIFVNP Trigger: AGGGTTTACAAAGATTCCTCAGTCTGTGTGCAGTGA...GGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | GCACTTTATATCCATCTGTTCATGCCACAATTGTATAATTATGAGACTGTAGGCGCAGTGATTCTTCTCTaGGTTGGCATAGTGACTTTC | + |
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Preference number: 4 (lower is better) Translates to: ALYIHLFMPQLYNYETVGAVILL*VGIVTF Trigger: GAAAGTCACTATGCCAACTCAGAGAAGAATCACTGC...GCCTACAGTCTCATAATTATACAATTGTGGCATGAACAGATGGATATAAAGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | AGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCACAATAGCAGGATGTAGCTaGGAGTCCTGTTATTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SSNFYAKESTLYPSVHATIAGCS*ESCYWP Trigger: AGGCCAATAACAGGACTCTCAGCTACATCCTGCTAT...TGTGGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | CAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAAGAATATCTGCATGCTaGATGACAGGAACTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: QNESNVIDLQSSNFYAKERISAC*MTGTWL Trigger: AAGCCAAGTTCCTGTCATTCAGCATGCAGATATTCT...TTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGAGAATATCTGCATGCTaGATGACAGGAACTTGGCTT | + |
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Preference number: 4 (lower is better) Translates to: VQNESNVIDLQSSNFYAKRISAC*MTGTWL Trigger: AAGCCAAGTTCCTGTCATTCAGCATGCAGATATTCT...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR GCA 90 bp | CAGAGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCGATGACTTATCCCTGTaGGCCAAAGAAAGGCACTAT | + |
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Preference number: 4 (lower is better) Translates to: QSSNFYAKESTLYPSVHADDLSL*AKERHY Trigger: ATAGTGCCTTTCTTTGGCGCACAGGGATAAGTCATC...GGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR GCA 90 bp | GCACTTTATATCCATCTGTTCATGCCACAATTGTATAATTATGAGACTGTAGGCGATGACTTATCCCTGTaGGCCAAAGAAAGGCACTAT | + |
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Preference number: 4 (lower is better) Translates to: ALYIHLFMPQLYNYETVGDDLSL*AKERHY Trigger: ATAGTGCCTTTCTTTGGCGCACAGGGATAAGTCATC...GCCTACAGTCTCATAATTATACAATTGTGGCATGAACAGATGGATATAAAGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR GCA 90 bp | AGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCACAAAGTTTCTTCCCCCATaGGTTACTGTGTCTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SSNFYAKESTLYPSVHATKFLPP*VTVSPL Trigger: GAGAGGAGACACAGTAACGCATGGGGGAAGAAACTT...TGTGGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CCA 90 bp | AATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAAGCGCAACAAAAAGACTATaGCAAATGGCAGAGATGTGT | + |
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Preference number: 4 (lower is better) Translates to: NESNVIDLQSSNFYAKESATKRL*QMAEMC Trigger: ACACATCTCTGCCATTTGCCATAGTCTTTTTGTTGC...GCTTTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CCA 90 bp | AATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAAGCTTCTCCATTGGCATATaGTTGGGTCTGTATTTGTTG | + |
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Preference number: 4 (lower is better) Translates to: NESNVIDLQSSNFYAKESFSIGI*LGLYLL Trigger: CAACAAATACAGACCCAACCATATGCCAATGGAGAA...GCTTTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGCTATGCAGATACCATaGCTCTCCATATTTTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: VQNESNVIDLQSSNFYAKAMQIP*LSIFSL Trigger: AAGAGAAAATATGGAGAGTCATGGTATCTGCATAGC...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR TCA 90 bp | CAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAATGGGTCTGTATTTGTTaGAGATTCATCTCATGGAGA | + |
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Preference number: 4 (lower is better) Translates to: QNESNVIDLQSSNFYAKEWVCIC*RFISWR Trigger: TCTCCATGAGATGAATCTTCAACAAATACAGACCCA...TTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR GCA 90 bp | AGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCACAGGACACTGCACACACTaGTCCATATCTGTCTCATTA | + |
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Preference number: 4 (lower is better) Translates to: SSNFYAKESTLYPSVHATGHCTH*SISVSL Trigger: TAATGAGACAGATATGGAGCAGTGTGTGCAGTGTCC...TGTGGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR GCA 90 bp | CAGAGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCGAACAAAATTCCAACTaGTGTCTGCTGCAAGATGCA | + |
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Preference number: 4 (lower is better) Translates to: QSSNFYAKESTLYPSVHAEQNSN*CLLQDA Trigger: TGCATCTTGCAGCAGACAGCAGTTGGAATTTTGTTC...GGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR GCA 90 bp | CAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAACACAGAAGAATATCTaGATGCTGAATGACAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: QNESNVIDLQSSNFYAKETQKNI*MLNDRN Trigger: GTTCCTGTCATTCAGCATGCAGATATTCTTCTGTGT...TTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR GCA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGACACAGAAGAATATCTaGATGCTGAATGACAGGAAC | + |
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Preference number: 4 (lower is better) Translates to: VQNESNVIDLQSSNFYAKTQKNI*MLNDRN Trigger: GTTCCTGTCATTCAGCATGCAGATATTCTTCTGTGT...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CCA 90 bp | CAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAGCAACAAAAAGACTATaGCAAATGGCAGAGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QNESNVIDLQSSNFYAKEATKRL*QMAEMC Trigger: ACACATCTCTGCCATTTGCCATAGTCTTTTTGTTGC...TTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS-3UTR CCA 90 bp | CAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAATTCTCCATTGGCATATaGTTGGGTCTGTATTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QNESNVIDLQSSNFYAKEFSIGI*LGLYLL Trigger: CAACAAATACAGACCCAACCATATGCCAATGGAGAA...TTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS-3UTR CCA 90 bp | GCACTTTATATCCATCTGTTCATGCCACAATTGTATAATTATGAGACTGTAGGCCCATTTCTTCTCCATTaGCATATGGTTGGGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ALYIHLFMPQLYNYETVGPFLLH*HMVGSV Trigger: TACAGACCCAACCATATGCCAATGGAGAAGAAATGG...GCCTACAGTCTCATAATTATACAATTGTGGCATGAACAGATGGATATAAAGTGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS-3UTR TCA 90 bp | AGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCACACAGGACCAGCTGAAATaGAGCAACAAAAAGACTATG | + |
|
Preference number: 4 (lower is better) Translates to: SSNFYAKESTLYPSVHATQDQLK*SNKKTM Trigger: CATAGTCTTTTTGTTGCTTCATTTCAGCTGGTCCTG...TGTGGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS-3UTR GCA 90 bp | AATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAAGCATTATCCTTGCTTTTTaGATAGCATTCACTGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NESNVIDLQSSNFYAKESIILAF*IAFTVS Trigger: ACTGACAGTGAATGCTATGCAAAAAGCAAGGATAAT...GCTTTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000166447.3 |
||
| CDS-3UTR GCA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGAACAGTGGCTTTGAATaGAATAACCACTGTAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: VQNESNVIDLQSSNFYAKNSGFE*NNHCNS Trigger: GCTATTACAGTGGTTATTGCATTCAAAGCCACTGTT...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS-3UTR GCA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGAATCAATCCAAGGAGTaGTATATTGGAAGCCAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VQNESNVIDLQSSNFYAKNQSKE*YIGSQD Trigger: ATCTTGGCTTCCAATATAGCACTCCTTGGATTGATT...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS-3UTR CCA 90 bp | AGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCACAGATTCTTCTCTGAGTTaGCATAGTGACTTTCTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SSNFYAKESTLYPSVHATDSSLS*HSDFLD Trigger: GTCCAGAAAGTCACTATGCCAACTCAGAGAAGAATC...TGTGGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS-3UTR CCA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGCAAGGAGTGCTATATTaGAAGCCAAGATACAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: VQNESNVIDLQSSNFYAKQGVLY*KPRYKT Trigger: TGTTTTGTATCTTGGCTTCCAATATAGCACTCCTTG...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS-3UTR CCA 90 bp | CAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAACAAGGAGTGCTATATTaGAAGCCAAGATACAAAACA | + |
|
Preference number: 4 (lower is better) Translates to: QNESNVIDLQSSNFYAKEQGVLY*KPRYKT Trigger: TGTTTTGTATCTTGGCTTCCAATATAGCACTCCTTG...TTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS-3UTR GCA 90 bp | GCACTTTATATCCATCTGTTCATGCCACAATTGTATAATTATGAGACTGTAGGCAACAGTGGCTTTGAATaGAATAACCACTGTAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALYIHLFMPQLYNYETVGNSGFE*NNHCNS Trigger: GCTATTACAGTGGTTATTGCATTCAAAGCCACTGTT...GCCTACAGTCTCATAATTATACAATTGTGGCATGAACAGATGGATATAAAGTGC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS-3UTR CCA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGTCAACCATCTCTTCATaGTGGTATGAGAAAATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VQNESNVIDLQSSNFYAKSTISS*WYEKIR Trigger: TCTTATTTTCTCATACCACCATGAAGAGATGGTTGA...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS-3UTR CCA 90 bp | AGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCACAACCATCTCTTCATGGTaGTATGAGAAAATAAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: SSNFYAKESTLYPSVHATTISSW*YEKIRL Trigger: GAGTCTTATTTTCTCATACCACCATGAAGAGATGGT...TGTGGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCAAGATAGTTGTCCTCTaGGTATTTGTAAGGATTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QSSNFYAKESTLYPSVHAKIVVL*VFVRIN Trigger: GTTAATCCTTACAAATACCCAGAGGACAACTATCTT...GGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACTCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS TCA 90 bp | TACAATCAAAGCAGCAGACAGCCTTGCCTTCCTGGGCAGCTTTCCTaGATCCAGGCCTACAGCTCTCACTGCACACAGACTGAGGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: YNQSSRQPCLPGQLS*IQAYSSHCTQTEES Trigger: AGATTCCTCAGTCTGTGTGCAGTGAGAGCTGTAGGCCTGGATTCAGGAAAGCTGCCCAGGAAGGCAAGGCTGTCTGCTGCTTTGATTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS GCA 90 bp | TTTGGCCAACACTGTGGAGAGAGCCACAGTGAACAAAATTCCAACTaGTGTCTGCTGCAAGATGCAGGTGGTTGTGTTGGGCTGGCCAAT | + |
|
Preference number: 5 (lower is better) Translates to: FGQHCGESHSEQNSN*CLLQDAGGCVGLAN Trigger: ATTGGCCAGCCCAACACAACCACCTGCATCTTGCAGCAGACAGCAGTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTGTTGGCCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS GCA 90 bp | ACTGTGGAGAGAGCCACAGTGAACAAAATTCCAACTGCTGTCTGCTaGAAGATGCAGGTGGTTGTGTTGGGCTGGCCAATAAACAGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: TVERATVNKIPTAVC*KMQVVVLGWPINSK Trigger: CTTGCTGTTTATTGGCCAGCCCAACACAACCACCTGCATCTTGCAGCAGACAGCAGTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS GCA 90 bp | AACACTGTGGAGAGAGCCACAGTGAACAAAATTCCAACTGCTGTCTaGTGCAAGATGCAGGTGGTTGTGTTGGGCTGGCCAATAAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: NTVERATVNKIPTAV*CKMQVVVLGWPINS Trigger: GCTGTTTATTGGCCAGCCCAACACAACCACCTGCATCTTGCAGCAGACAGCAGTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS TCA 90 bp | CTGTGGTCATCTGGGAGGATCAGACCAACCCAGGACCAGCTGAAATaGAGCAACAAAAAGACTATGGCAAATGGCAGAGATGTGTCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LWSSGRIRPTQDQLK*SNKKTMANGRDVSS Trigger: CGAAGACACATCTCTGCCATTTGCCATAGTCTTTTTGTTGCTTCATTTCAGCTGGTCCTGGGTTGGTCTGATCCTCCCAGATGACCACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS TCA 90 bp | GCAGCTTTCCTGAATCCAGGCCTACAGCTCTCACTGCACACAGACTaGGGAATCTTTGTAAACCCTATAGGCCACTGTATCATCTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AAFLNPGLQLSLHTD*GIFVNPIGHCIICS Trigger: TGAACAGATGATACAGTGGCCTATAGGGTTTACAAAGATTCCTCAGTCTGTGTGCAGTGAGAGCTGTAGGCCTGGATTCAGGAAAGCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS TCA 90 bp | ATAGGCCAAAAAGCTCACAGATTTCTGGAGGCAGTGATTCTTCTCTaGGTTGGCATAGTGACTTTCTGGACACTGCACACACTGCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: IGQKAHRFLEAVILL*VGIVTFWTLHTLLH Trigger: ATGGAGCAGTGTGTGCAGTGTCCAGAAAGTCACTATGCCAACTCAGAGAAGAATCACTGCCTCCAGAAATCTGTGAGCTTTTTGGCCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS CCA 90 bp | GGAAAGGGTGAAGCTGCCAGGGGGAGAATGCCATTTCTTCTCCATTaGCATATGGTTGGGTCTGTATTTGTTGAAGATTCATCTCATGGA | + |
|
Preference number: 5 (lower is better) Translates to: GKGEAARGRMPFLLH*HMVGSVFVEDSSHG Trigger: TCCATGAGATGAATCTTCAACAAATACAGACCCAACCATATGCCAATGGAGAAGAAATGGCATTCTCCCCCTGGCAGCTTCACCCTTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS CCA 90 bp | CCAAAAAGCTCACAGATTTCTGGAGGCAGTGATTCTTCTCTGAGTTaGCATAGTGACTTTCTGGACACTGCACACACTGCTCCATATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PKSSQISGGSDSSLS*HSDFLDTAHTAPYL Trigger: CAGATATGGAGCAGTGTGTGCAGTGTCCAGAAAGTCACTATGCCAACTCAGAGAAGAATCACTGCCTCCAGAAATCTGTGAGCTTTTTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS CCA 90 bp | GTGAAGCTGCCAGGGGGAGAATGCCATTTCTTCTCCATTGGCATATaGTTGGGTCTGTATTTGTTGAAGATTCATCTCATGGAGACTATA | + |
|
Preference number: 5 (lower is better) Translates to: VKLPGGECHFFSIGI*LGLYLLKIHLMETI Trigger: TATAGTCTCCATGAGATGAATCTTCAACAAATACAGACCCAACCATATGCCAATGGAGAAGAAATGGCATTCTCCCCCTGGCAGCTTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS CCA 90 bp | CCACAGCATACACAGCATTGTATATATTGTAGCCTTCCTCACTCATaGCTGGGTCAAAAAGGTGTCTTGGAAGTAAATCCAAAGAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: PQHTQHCIYCSLPHS*LGQKGVLEVNPKKH Trigger: ATGCTTCTTTGGATTTACTTCCAAGACACCTTTTTGACCCAGCCATGAGTGAGGAAGGCTACAATATATACAATGCTGTGTATGCTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CAA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGCCATTTCTTCTCCATaGGCATATGGTTGGGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VQNESNVIDLQSSNFYAKAISSP*AYGWVC Trigger: ACAGACCCAACCATATGCCAATGGAGAAGAAATGGC...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CAA 90 bp | CAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAAAGGCACACACAAATTaGGGACTATACAGGAACCCA | + |
|
Preference number: 5 (lower is better) Translates to: QNESNVIDLQSSNFYAKEKAHTN*GLYRNP Trigger: TGGGTTCCTGTATAGTCCCAAATTTGTGTGTGCCTT...TTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000166447.3 |
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| CDS-3UTR CAA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGAGATCAGGGTTCCTGTaGATCTCTTCAATGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VQNESNVIDLQSSNFYAKRSGFL*ISSMAN Trigger: GTTTGCCATTGAAGAGATCAACAGGAACCCTGATCT...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CAA 90 bp | CAGAGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCAGATCAGGGTTCCTGTaGATCTCTTCAATGGCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QSSNFYAKESTLYPSVHARSGFL*ISSMAN Trigger: GTTTGCCATTGAAGAGATCAACAGGAACCCTGATCT...GGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CAA 90 bp | AGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCACAGCCATTTCTTCTCCATaGGCATATGGTTGGGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SSNFYAKESTLYPSVHATAISSP*AYGWVC Trigger: ACAGACCCAACCATATGCCAATGGAGAAGAAATGGC...TGTGGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CAA 90 bp | CAGAGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCGCTGGAACAGTGGCTTaGAATGCAATAACCACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: QSSNFYAKESTLYPSVHAAGTVA*NAITTV Trigger: TACAGTGGTTATTGCATTCAAAGCCACTGTTCCAGC...GGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CAA 90 bp | CAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAACCAAGGAGTGCTATATaGGAAGCCAAGATACAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: QNESNVIDLQSSNFYAKEPRSAI*EAKIQN Trigger: GTTTTGTATCTTGGCTTCCAATATAGCACTCCTTGG...TTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CAA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGGTCAAAAAGGTGTCTaGGAAGTAAATCCAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VQNESNVIDLQSSNFYAKGQKGV*EVNPKK Trigger: CTTCTTTGGATTTACTTCCAAGACACCTTTTTGACC...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS-3UTR CAA 90 bp | AATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAAAGCTCATTAGAAATCTCATaGTTGGCACAGGGAATACAA | + |
|
Preference number: 5 (lower is better) Translates to: NESNVIDLQSSNFYAKESSLEIS*LAQGIQ Trigger: TTGTATTCCCTGTGCCAACAATGAGATTTCTAATGA...GCTTTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CAA 90 bp | AGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCACAGCTGGAACAGTGGCTTaGAATGCAATAACCACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: SSNFYAKESTLYPSVHATAGTVA*NAITTV Trigger: TACAGTGGTTATTGCATTCAAAGCCACTGTTCCAGC...TGTGGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS-3UTR CAA 90 bp | GCACTTTATATCCATCTGTTCATGCCACAATTGTATAATTATGAGACTGTAGGCCCAAGGAGTGCTATATaGGAAGCCAAGATACAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: ALYIHLFMPQLYNYETVGPRSAI*EAKIQN Trigger: GTTTTGTATCTTGGCTTCCAATATAGCACTCCTTGG...GCCTACAGTCTCATAATTATACAATTGTGGCATGAACAGATGGATATAAAGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS-3UTR CAA 90 bp | GTACAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGCTTTTCCATAATGCATaGGAAAATGCATTCCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: VQNESNVIDLQSSNFYAKLFHNA*ENAFHV Trigger: CACATGGAATGCATTTTCCAATGCATTATGGAAAAG...CTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTGTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS-3UTR CAA 90 bp | CAAAATGAGTCCAACGTGATTGACCTCCAGAGTAGCAATTTTTATGCAAAGGAATCATTAGAAATCTCATaGTTGGCACAGGGAATACAA | + |
|
Preference number: 5 (lower is better) Translates to: QNESNVIDLQSSNFYAKESLEIS*LAQGIQ Trigger: TTGTATTCCCTGTGCCAACAATGAGATTTCTAATGA...TTCCTTTGCATAAAAATTGCTACTCTGGAGGTCAATCACGTTGGACTCATTTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS-3UTR CAA 90 bp | AGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCACAGGTCAAAAAGGTGTCTaGGAAGTAAATCCAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SSNFYAKESTLYPSVHATGQKGV*EVNPKK Trigger: CTTCTTTGGATTTACTTCCAAGACACCTTTTTGACC...TGTGGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS GCA 90 bp | ACTAATTGTTACATCTCCTTCATGGTAAAAATTATCCTTGCTTTTTaGATAGCATTCACTGTCAGTAAAGGCACACACAAATTTGGGACT | + |
|
Preference number: 5 (lower is better) Translates to: TNCYISFMVKIILAF*IAFTVSKGTHKFGT Trigger: AGTCCCAAATTTGTGTGTGCCTTTACTGACAGTGAATGCTATGCAAAAAGCAAGGATAATTTTTACCATGAAGGAGATGTAACAATTAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000166447.3 |
||
| CDS-3UTR CAA 90 bp | AGTAGCAATTTTTATGCAAAGGAAAGCACTTTATATCCATCTGTTCATGCCACACTTTTCCATAATGCATaGGAAAATGCATTCCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSNFYAKESTLYPSVHATLFHNA*ENAFHV Trigger: CACATGGAATGCATTTTCCAATGCATTATGGAAAAG...TGTGGCATGAACAGATGGATATAAAGTGCTTTCCTTTGCATAAAAATTGCTACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS TCA 72 bp | TTCCAATGTGGGCAGATGCTGACCATGATGGTCCTGTaGGTACAGCAGGTGACGTCCTCTTGTGACCACAGT | + |
|
Preference number: 6 (lower is better) Translates to: FQCGQMLTMMVL*VQQVTSSCDHS Trigger: ACTGTGGTCACAAGAGGACGTCACCTGCTGTACTCACAGGACCATCATGGTCAGCATCTGCCCACATTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS GCA 72 bp | GAGAGAGCCACAGTGAACAAAATTCCAACTGCTGTCTaGTGCAAGATGCAGGTGGTTGTGTTGGGCTGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: ERATVNKIPTAV*CKMQVVVLGWP Trigger: TGGCCAGCCCAACACAACCACCTGCATCTTGCAGCAGACAGCAGTTGGAATTTTGTTCACTGTGGCTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
||
| CDS CCA 72 bp | GGAATACAATCAAAGCAGCAGACAGCCTTGCCTTCCTaGGCAGCTTTCCTGAATCCAGGCCTACAGCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GIQSKQQTALPS*AAFLNPGLQLS Trigger: TGAGAGCTGTAGGCCTGGATTCAGGAAAGCTGCCCAGGAAGGCAAGGCTGTCTGCTGCTTTGATTGTATTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS GCA 72 bp | CACTGTGGAGAGAGCCACAGTGAACAAAATTCCAACTaGTGTCTGCTGCAAGATGCAGGTGGTTGTGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: HCGESHSEQNSN*CLLQDAGGCVG Trigger: CCCAACACAACCACCTGCATCTTGCAGCAGACAGCAGTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS CAA 72 bp | AGCCTTCCTCACTCATGGCTGGGTCAAAAAGGTGTCTaGGAAGTAAATCCAAAGAAGCATTGGGTTGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: SLPHSWLGQKGV*EVNPKKHWVGS Trigger: ACTGCCAACCCAATGCTTCTTTGGATTTACTTCCAAGACACCTTTTTGACCCAGCCATGAGTGAGGAAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS CAA 90 bp | AAGCTGCCAGGGGGAGAATGCCATTTCTTCTCCATTGGCATATGGTaGGGTCTGTATTTGTTGAAGATTCATCTCATGGAGACTATAGGC | + |
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Preference number: 6 (lower is better) Translates to: KLPGGECHFFSIGIW*GLYLLKIHLMETIG Trigger: GCCTATAGTCTCCATGAGATGAATCTTCAACAAATACAGACCCAACCATATGCCAATGGAGAAGAAATGGCATTCTCCCCCTGGCAGCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS GCA 72 bp | CCATCTCACCATTCTAGCTGGAACAGTGGCTTTGAATaGAATAACCACTGTAATAGCTTTGGCCAACACTGT | + |
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Preference number: 6 (lower is better) Translates to: PSHHSSWNSGFE*NNHCNSFGQHC Trigger: ACAGTGTTGGCCAAAGCTATTACAGTGGTTATTGCATTCAAAGCCACTGTTCCAGCTAGAATGGTGAGATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS CCA 72 bp | CCAGGGGGAGAATGCCATTTCTTCTCCATTGGCATATaGTTGGGTCTGTATTTGTTGAAGATTCATCTCATG | + |
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Preference number: 6 (lower is better) Translates to: PGGECHFFSIGI*LGLYLLKIHLM Trigger: CATGAGATGAATCTTCAACAAATACAGACCCAACCATATGCCAATGGAGAAGAAATGGCATTCTCCCCCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS CAA 72 bp | CACTGCTCCATATCTGTCTCATTAGAAATCTCATTGTaGGCACAGGGAATACAATCAAAGCAGCAGACAGCC | + |
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Preference number: 6 (lower is better) Translates to: HCSISVSLEISL*AQGIQSKQQTA Trigger: GGCTGTCTGCTGCTTTGATTGTATTCCCTGTGCCAACAATGAGATTTCTAATGAGACAGATATGGAGCAGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS CAA 72 bp | ACAGTGGCTTTGAATGCAATAACCACTGTAATAGCTTaGGCCAACACTGTGGAGAGAGCCACAGTGAACAAA | + |
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Preference number: 6 (lower is better) Translates to: TVALNAITTVIA*ANTVERATVNK Trigger: TTTGTTCACTGTGGCTCTCTCCACAGTGTTGGCCAAAGCTATTACAGTGGTTATTGCATTCAAAGCCACTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS CAA 90 bp | GAATGCCATTTCTTCTCCATTGGCATATGGTTGGGTCTGTATTTGTaGAAGATTCATCTCATGGAGACTATAGGCCACAGCATACACAGC | + |
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Preference number: 6 (lower is better) Translates to: ECHFFSIGIWLGLYL*KIHLMETIGHSIHS Trigger: GCTGTGTATGCTGTGGCCTATAGTCTCCATGAGATGAATCTTCAACAAATACAGACCCAACCATATGCCAATGGAGAAGAAATGGCATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS CAA 90 bp | GGAGAATGCCATTTCTTCTCCATTGGCATATGGTTGGGTCTGTATTaGTTGAAGATTCATCTCATGGAGACTATAGGCCACAGCATACAC | + |
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Preference number: 6 (lower is better) Translates to: GECHFFSIGIWLGLY*LKIHLMETIGHSIH Trigger: GTGTATGCTGTGGCCTATAGTCTCCATGAGATGAATCTTCAACAAATACAGACCCAACCATATGCCAATGGAGAAGAAATGGCATTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS CAA 72 bp | TTCTTCTCCATTGGCATATGGTTGGGTCTGTATTTGTaGAAGATTCATCTCATGGAGACTATAGGCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: FFSIGIWLGLYL*KIHLMETIGHS Trigger: GCTGTGGCCTATAGTCTCCATGAGATGAATCTTCAACAAATACAGACCCAACCATATGCCAATGGAGAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS CAA 90 bp | ATATATTGTAGCCTTCCTCACTCATGGCTGGGTCAAAAAGGTGTCTaGGAAGTAAATCCAAAGAAGCATTGGGTTGGCAGTTCTCCAAAA | + |
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Preference number: 6 (lower is better) Translates to: IYCSLPHSWLGQKGV*EVNPKKHWVGSSPK Trigger: TTTTGGAGAACTGCCAACCCAATGCTTCTTTGGATTTACTTCCAAGACACCTTTTTGACCCAGCCATGAGTGAGGAAGGCTACAATATAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS CCA 72 bp | ACACAGCATTGTATATATTGTAGCCTTCCTCACTCATaGCTGGGTCAAAAAGGTGTCTTGGAAGTAAATCCA | + |
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Preference number: 6 (lower is better) Translates to: TQHCIYCSLPHS*LGQKGVLEVNP Trigger: TGGATTTACTTCCAAGACACCTTTTTGACCCAGCCATGAGTGAGGAAGGCTACAATATATACAATGCTGTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS CAA 72 bp | CATTTCTTCTCCATTGGCATATGGTTGGGTCTGTATTaGTTGAAGATTCATCTCATGGAGACTATAGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: HFFSIGIWLGLY*LKIHLMETIGH Trigger: GTGGCCTATAGTCTCCATGAGATGAATCTTCAACAAATACAGACCCAACCATATGCCAATGGAGAAGAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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| CDS CCA 72 bp | CAAAAAGGTGTCTTGGAAGTAAATCCAAAGAAGCATTaGGTTGGCAGTTCTCCAAAAGCTGACAATCAAATT | + |
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Preference number: 6 (lower is better) Translates to: QKGVLEVNPKKH*VGSSPKADNQI Trigger: AATTTGATTGTCAGCTTTTGGAGAACTGCCAACCCAATGCTTCTTTGGATTTACTTCCAAGACACCTTTTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000166447.3 ENSMUST00000233771.2 |
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