Pregenerated sensors for VMN2R6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090581Ensembl transcript IDs: ENSMUST00000165012.3, ENSMUST00000176481.9
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TACATAAACCTCAAGAGACAGGAAGCCCTAGGGAGTTTAGAGGTCTaGTGGGGTTGGGGATGGAGGGTAGGGACACCCTCGTGGAGACAG | + |
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Preference number: 1 (lower is better) Translates to: YINLKRQEALGSLEV*WGWGWRVGTPSWRQ Trigger: CTGTCTCCACGAGGGTGTCCCTACCCTCCATCCCCAACCCCACCAGACCTCTAAACTCCCTAGGGCTTCCTGTCTCTTGAGGTTTATGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR TCA 90 bp | ATGCCACAGGGGCACATGTTCCACTATGTTCATAGCAGCCTTGTTTaGTATAGCCAGGAACTCGAAATAGCCCAGATGCCCCACAACAGA | + |
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Preference number: 1 (lower is better) Translates to: MPQGHMFHYVHSSLV*YSQELEIAQMPHNR Trigger: TCTGTTGTGGGGCATCTGGGCTATTTCGAGTTCCTGGCTATATCAAACAAGGCTGCTATGAACATAGTGGAACATGTGCCCCTGTGGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR TCA 90 bp | CTTCTGTGTTTGCTAGGCCCCGGCATAGCCTCACAAGAGACAGTTTaGACAGGGTCCATACAGCAAAATCTTGCTGGTGTATGCAATGGT | + |
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Preference number: 1 (lower is better) Translates to: LLCLLGPGIASQETV*TGSIQQNLAGVCNG Trigger: ACCATTGCATACACCAGCAAGATTTTGCTGTATGGACCCTGTTCAAACTGTCTCTTGTGAGGCTATGCCGGGGCCTAGCAAACACAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR CCA 90 bp | TGGTGTCGGCGTTTGGAGGCTGATTATGGGATGGATCCCTGGGTATaGCAGTCTCTAGATAGTTCATCCTTTTGTCTCAGCTCCAAACTT | + |
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Preference number: 1 (lower is better) Translates to: WCRRLEADYGMDPWV*QSLDSSSFCLSSKL Trigger: AAGTTTGGAGCTGAGACAAAAGGATGAACTATCTAGAGACTGCCATACCCAGGGATCCATCCCATAATCAGCCTCCAAACGCCGACACCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR CCA 90 bp | AGTTTGAACAGGGTCCATACAGCAAAATCTTGCTGGTGTATGCAATaGTGTCGGCGTTTGGAGGCTGATTATGGGATGGATCCCTGGGTA | + |
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Preference number: 1 (lower is better) Translates to: SLNRVHTAKSCWCMQ*CRRLEADYGMDPWV Trigger: TACCCAGGGATCCATCCCATAATCAGCCTCCAAACGCCGACACCATTGCATACACCAGCAAGATTTTGCTGTATGGACCCTGTTCAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR GCA 90 bp | ATCCCAACACCCAGAAATACCACTCTTGGGAATATACCCAAAAGATaGCTCACCATGCCACAGGGGCACATGTTCCACTATGTTCATAGC | + |
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Preference number: 1 (lower is better) Translates to: IPTPRNTTLGNIPKR*LTMPQGHMFHYVHS Trigger: GCTATGAACATAGTGGAACATGTGCCCCTGTGGCATGGTGAGGCATCTTTTGGGTATATTCCCAAGAGTGGTATTTCTGGGTGTTGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR TCA 90 bp | CAACAGGAAGACAGGGCATCAAAAGAGGGAGGGGGTTACCATCCCTaGGTCACAAATGACTCAATTGTTCCTGTCTTAAAGAACTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: QQEDRASKEGGGYHP*VTNDSIVPVLKNFR Trigger: CCTGAAGTTCTTTAAGACAGGAACAATTGAGTCATTTGTGACTCAGGGATGGTAACCCCCTCCCTCTTTTGATGCCCTGTCTTCCTGTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR GCA 90 bp | CCAGAAATACCACTCTTGGGAATATACCCAAAAGATGCCTCACCATaGCACAGGGGCACATGTTCCACTATGTTCATAGCAGCCTTGTTT | + |
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Preference number: 1 (lower is better) Translates to: PEIPLLGIYPKDASP*HRGTCSTMFIAALF Trigger: AAACAAGGCTGCTATGAACATAGTGGAACATGTGCCCCTGTGGCATGGTGAGGCATCTTTTGGGTATATTCCCAAGAGTGGTATTTCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR GCA 90 bp | TTCTCTCCCCCTGCTCTGAAGTCACGACAACGTTCTTACTCTCAATaGCTTTTCTCTGAAAGCTATACTTATACTTCTAAGTTCTTCTTG | + |
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Preference number: 1 (lower is better) Translates to: FSPPALKSRQRSYSQ*LFSESYTYTSKFFL Trigger: CAAGAAGAACTTAGAAGTATAAGTATAGCTTTCAGAGAAAAGGCATTGAGAGTAAGAACGTTGTCGTGACTTCAGAGCAGGGGGAGAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR GCA 90 bp | AGACTCATGCATGCTCATTTCCATTCAAACCAGTTAGACCCAGATTaGCTGCATTCTCACAATTACATACTTACACATACATGTGCATAC | + |
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Preference number: 1 (lower is better) Translates to: RLMHAHFHSNQLDPD*LHSHNYILTHTCAY Trigger: GTATGCACATGTATGTGTAAGTATGTAATTGTGAGAATGCAGGCAATCTGGGTCTAACTGGTTTGAATGGAAATGAGCATGCATGAGTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR CCA 90 bp | TACTCAGCTATTAAGAATGATGACATCCTGAGTTTTGAAGGCAAATaGATGGAACTAGAAAATATCATCCTGAATGAGGGTAACTCAGAC | + |
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Preference number: 1 (lower is better) Translates to: YSAIKNDDILSFEGK*MELENIILNEGNSD Trigger: GTCTGAGTTACCCTCATTCAGGATGATATTTTCTAGTTCCATCCATTTGCCTTCAAAACTCAGGATGTCATCATTCTTAATAGCTGAGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR CCA 90 bp | ACTCTATACAGTTGCTGGTGGGATGGCAAACTGGTACAATTACTCTaGAAATCAATCTGGAGTTTGTTCAGAAAATTGGAAATAGAACTA | + |
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Preference number: 1 (lower is better) Translates to: TLYSCWWDGKLVQLL*KSIWSLFRKLEIEL Trigger: TAGTTCTATTTCCAATTTTCTGAACAAACTCCAGATTGATTTCCAGAGTAATTGTACCAGTTTGCCATCCCACCAGCAACTGTATAGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR CAA 90 bp | ACTTCTGTGTTTGCTAGGCCCCGGCATAGCCTCACAAGAGACAGTTaGAACAGGGTCCATACAGCAAAATCTTGCTGGTGTATGCAATGG | + |
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Preference number: 2 (lower is better) Translates to: TSVFARPRHSLTRDS*NRVHTAKSCWCMQW Trigger: CCATTGCATACACCAGCAAGATTTTGCTGTATGGACCCTGTTCAAACTGTCTCTTGTGAGGCTATGCCGGGGCCTAGCAAACACAGAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR-3UTR CCA 90 bp | AAACTAGTATCTTCCACATCTATGAGACCCCTTAGAACTGCAGTTTCTCCAGGCGGAATAGGAGGAGCATaGACAGGGAAGGGAATACAA | + |
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Preference number: 2 (lower is better) Translates to: KLVSSTSMRPLRTAVSPGGIGGA*TGKGIQ Trigger: TTGTATTCCCTTCCCTGTCCATGCTCCTCCTATTCC...GCCTGGAGAAACTGCAGTTCTAAGGGGTCTCATAGATGTGGAAGATACTAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR-3UTR TCA 90 bp | AAACTAGTATCTTCCACATCTATGAGACCCCTTAGAACTGCAGTTTCTCCAGGCCATAGCAGCCTTGTTTaGTATAGCCAGGAACTCGAA | + |
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Preference number: 2 (lower is better) Translates to: KLVSSTSMRPLRTAVSPGHSSLV*YSQELE Trigger: TTCGAGTTCCTGGCTATATCAAACAAGGCTGCTATG...GCCTGGAGAAACTGCAGTTCTAAGGGGTCTCATAGATGTGGAAGATACTAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCCTGTACCCCTCAACTATCCATTCTTCCATTCTTCTTGTGCAAAGTCTAAAGTCACCTGAGTGCTaGCTCATTCCTTGTTCAAAG | + |
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Preference number: 2 (lower is better) Translates to: LSLYPSTIHSSILLVQSLKSPEC*LIPCSK Trigger: CTTTGAACAAGGAATGAGTCAGCACTCAGGTGACTT...TAGACTTTGCACAAGAAGAATGGAAGAATGGATAGTTGAGGGGTACAGGGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR-3UTR CCA 90 bp | CTGTCCCTGTACCCCTCAACTATCCATTCTTCCATTCTTCTTGTGCAAAGTCTAAGGAGTTATGGGATATaGAATAGGAGGAGCATGGAC | + |
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Preference number: 2 (lower is better) Translates to: LSLYPSTIHSSILLVQSLRSYGI*NRRSMD Trigger: GTCCATGCTCCTCCTATTCCATATCCCATAACTCCT...TAGACTTTGCACAAGAAGAATGGAAGAATGGATAGTTGAGGGGTACAGGGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR-3UTR TCA 90 bp | AAACTAGTATCTTCCACATCTATGAGACCCCTTAGAACTGCAGTTTCTCCAGGCTCCCTGAGTCACAAATaGCTCAATTGTTCCTGTCTT | + |
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Preference number: 2 (lower is better) Translates to: KLVSSTSMRPLRTAVSPGSLSHK*LNCSCL Trigger: AAGACAGGAACAATTGAGTCATTTGTGACTCAGGGA...GCCTGGAGAAACTGCAGTTCTAAGGGGTCTCATAGATGTGGAAGATACTAGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR-3UTR TCA 90 bp | GTAACTCCTTCTATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTATCATTACAGGAAGTCACCTaGGTGCTGACTCATTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: VTPSMGVLFPILRRGKVSLQEVT*VLTHSL Trigger: CAAGGAATGAGTCAGCACTCAGGTGACTTCCTGTAA...TGATACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATAGAAGGAGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR-3UTR TCA 90 bp | GTAACTCCTTCTATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTATCAGCATCAGCAGCTGCTTaGAAAACAATGTTCAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: VTPSMGVLFPILRRGKVSASAAA*KTMFRG Trigger: TCCTCTGAACATTGTTTTTCAAGCAGCTGCTGATGC...TGATACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATAGAAGGAGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCCTGTACCCCTCAACTATCCATTCTTCCATTCTTCTTGTGCAAAGTCTAATGAGCATCAGCAGCTaGTTGAAAAACAATGTTCAG | + |
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Preference number: 2 (lower is better) Translates to: LSLYPSTIHSSILLVQSLMSISS*LKNNVQ Trigger: CTGAACATTGTTTTTCAAGCAGCTGCTGATGCTCAT...TAGACTTTGCACAAGAAGAATGGAAGAATGGATAGTTGAGGGGTACAGGGACAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR-3UTR CCA 90 bp | GTAACTCCTTCTATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTATCAACTCTATACAGTTGCTaGTGGGATGGCAAACTGGTA | + |
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Preference number: 2 (lower is better) Translates to: VTPSMGVLFPILRRGKVSTLYSC*WDGKLV Trigger: TACCAGTTTGCCATCCCACCAGCAACTGTATAGAGT...TGATACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATAGAAGGAGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR CAA 90 bp | TGGGATGGCAAACTGGTACAATTACTCTGGAAATCAATCTGGAGTTaGTTCAGAAAATTGGAAATAGAACTACCTGAAGACCCAGGTGTT | + |
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Preference number: 2 (lower is better) Translates to: WDGKLVQLLWKSIWS*FRKLEIELPEDPGV Trigger: AACACCTGGGTCTTCAGGTAGTTCTATTTCCAATTTTCTGAACAAACTCCAGATTGATTTCCAGAGTAATTGTACCAGTTTGCCATCCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR CAA 90 bp | CTGGTACAATTACTCTGGAAATCAATCTGGAGTTTGTTCAGAAAATaGGAAATAGAACTACCTGAAGACCCAGGTGTTGCAGTAAATCTC | + |
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Preference number: 2 (lower is better) Translates to: LVQLLWKSIWSLFRK*EIELPEDPGVAVNL Trigger: GAGATTTACTGCAACACCTGGGTCTTCAGGTAGTTCTATTTCCAATTTTCTGAACAAACTCCAGATTGATTTCCAGAGTAATTGTACCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR TCA 72 bp | GGGGGACTCTCAATAATGTACCAGAGACCTGGGAGGTaGGAGACTCTCAGGACCCAAAGGGAGGGAGCTAGA | + |
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Preference number: 3 (lower is better) Translates to: GGLSIMYQRPGR*ETLRTQREGAR Trigger: TCTAGCTCCCTCCCTTTGGGTCCTGAGAGTCTCTCACCTCCCAGGTCTCTGGTACATTATTGAGAGTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR TCA 72 bp | TTGCTGGTGTATGCAATGGTGTCGGCGTTTGGAGGCTaGTTATGGGATGGATCCCTGGGTATGGCAGTCTCT | + |
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Preference number: 3 (lower is better) Translates to: LLVYAMVSAFGG*LWDGSLGMAVS Trigger: AGAGACTGCCATACCCAGGGATCCATCCCATAATCAGCCTCCAAACGCCGACACCATTGCATACACCAGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR TCA 72 bp | CCCATCCAATGGACAAAGGTTGCTAACCCCTGTGTTTaGATTAGGGGAAAGTTGGAAGGAGCTGAGGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: PIQWTKVANPCV*IRGKLEGAEEE Trigger: CTCCTCCTCAGCTCCTTCCAACTTTCCCCTAATTCAAACACAGGGGTTAGCAACCTTTGTCCATTGGATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR TCA 72 bp | TTGCTAGGCCCCGGCATAGCCTCACAAGAGACAGTTTaGACAGGGTCCATACAGCAAAATCTTGCTGGTGTA | + |
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Preference number: 3 (lower is better) Translates to: LLGPGIASQETV*TGSIQQNLAGV Trigger: TACACCAGCAAGATTTTGCTGTATGGACCCTGTTCAAACTGTCTCTTGTGAGGCTATGCCGGGGCCTAGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR TCA 72 bp | GGGCACATGTTCCACTATGTTCATAGCAGCCTTGTTTaGTATAGCCAGGAACTCGAAATAGCCCAGATGCCC | + |
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Preference number: 3 (lower is better) Translates to: GHMFHYVHSSLV*YSQELEIAQMP Trigger: GGGCATCTGGGCTATTTCGAGTTCCTGGCTATATCAAACAAGGCTGCTATGAACATAGTGGAACATGTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR TCA 72 bp | GGTAGGAAGCAGGTTTACAGGAAGTCACCTGAGTGCTaGCTCATTCCTTGTTCAAAGCCTCTCACAGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: GRKQVYRKSPEC*LIPCSKPLTGE Trigger: TTCTCCTGTGAGAGGCTTTGAACAAGGAATGAGTCAGCACTCAGGTGACTTCCTGTAAACCTGCTTCCTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR GCA 72 bp | CCACTCTTGGGAATATACCCAAAAGATGCCTCACCATaGCACAGGGGCACATGTTCCACTATGTTCATAGCA | + |
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Preference number: 3 (lower is better) Translates to: PLLGIYPKDASP*HRGTCSTMFIA Trigger: TGCTATGAACATAGTGGAACATGTGCCCCTGTGGCATGGTGAGGCATCTTTTGGGTATATTCCCAAGAGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR GCA 72 bp | CCCAGAAATACCACTCTTGGGAATATACCCAAAAGATaGCTCACCATGCCACAGGGGCACATGTTCCACTAT | + |
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Preference number: 3 (lower is better) Translates to: PRNTTLGNIPKR*LTMPQGHMFHY Trigger: ATAGTGGAACATGTGCCCCTGTGGCATGGTGAGGCATCTTTTGGGTATATTCCCAAGAGTGGTATTTCTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR GCA 72 bp | AGCTCTTTGGGTACTTTCTCTAGCTCCTCCATTGGGTaGCCTGTGATCCATCCAATAGCTGACTGTGAGTAT | + |
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Preference number: 3 (lower is better) Translates to: SSLGTFSSSSIG*PVIHPIADCEY Trigger: ATACTCACAGTCAGCTATTGGATGGATCACAGGGCACCCAATGGAGGAGCTAGAGAAAGTACCCAAAGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR TCA 72 bp | GACAGGGCATCAAAAGAGGGAGGGGGTTACCATCCCTaGGTCACAAATGACTCAATTGTTCCTGTCTTAAAG | + |
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Preference number: 3 (lower is better) Translates to: DRASKEGGGYHP*VTNDSIVPVLK Trigger: CTTTAAGACAGGAACAATTGAGTCATTTGTGACTCAGGGATGGTAACCCCCTCCCTCTTTTGATGCCCTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR TCA 72 bp | GTGAGTTCTTTTGTGATTGGGTTACCTCACTCAGGATaGTGCCCTCCAGGTCCAAATCTCTGCTTTTGTCTC | + |
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Preference number: 3 (lower is better) Translates to: VSSFVIGLPHSG*CPPGPNLCFCL Trigger: GAGACAAAAGCAGAGATTTGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCACAAAAGAACTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR GCA 72 bp | CTTCCCACCCACTCCCAATTCTTAGCCCTGGTGTTCTaGTGTACTGAGGCATATAAAGTTTGCAAGACCAAT | + |
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Preference number: 3 (lower is better) Translates to: LPTHSQFLALVF*CTEAYKVCKTN Trigger: ATTGGTCTTGCAAACTTTATATGCCTCAGTACAGCAGAACACCAGGGCTAAGAATTGGGAGTGGGTGGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR-3UTR CAA 90 bp | CTGTCCCTGTACCCCTCAACTATCCATTCTTCCATTCTTCTTGTGCAAAGTCTAGATCCCTTTAGCTCTTaGGGTACTTTCTCTAGCTCC | + |
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Preference number: 3 (lower is better) Translates to: LSLYPSTIHSSILLVQSLDPFSS*GTFSSS Trigger: GGAGCTAGAGAAAGTACCCAAAGAGCTAAAGGGATC...TAGACTTTGCACAAGAAGAATGGAAGAATGGATAGTTGAGGGGTACAGGGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR GCA 72 bp | CAGCAAGGATGTGTGCAAAGAGAAACTCTATACAGTTaGTGGTGGGATGGCAAACTGGTACAATTACTCTGG | + |
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Preference number: 3 (lower is better) Translates to: QQGCVQRETLYS*WWDGKLVQLLW Trigger: CCAGAGTAATTGTACCAGTTTGCCATCCCACCAGCAACTGTATAGAGTTTCTCTTTGCACACATCCTTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR-3UTR CAA 90 bp | GTAACTCCTTCTATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTATCAGTGCTGACTCATTCCTaGTTCAAAGCCTCTCACAGG | + |
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Preference number: 3 (lower is better) Translates to: VTPSMGVLFPILRRGKVSVLTHS*FKASHR Trigger: CCTGTGAGAGGCTTTGAACAAGGAATGAGTCAGCAC...TGATACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATAGAAGGAGTTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR TCA 72 bp | ATAAAGTTTGCAAGACCAATGGGCCTCTCTTTCCACTaGTGGCCAACTAGGCCATCTTCTGATACATATGCA | + |
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Preference number: 3 (lower is better) Translates to: IKFARPMGLSFH*WPTRPSSDTYA Trigger: TGCATATGTATCAGAAGATGGCCTAGTTGGCCATCAGTGGAAAGAGAGGCCCATTGGTCTTGCAAACTTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR TCA 72 bp | CAGCAGCTGCTTGAAAAACAATGTTCAGAGGAAGATTaGGCTATGCCATTATCCAGCTTTGCATGTCACATG | + |
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Preference number: 3 (lower is better) Translates to: QQLLEKQCSEED*AMPLSSFACHM Trigger: CATGTGACATGCAAAGCTGGATAATGGCATAGCTCAATCTTCCTCTGAACATTGTTTTTCAAGCAGCTGCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR CCA 72 bp | GGATGTGTGCAAAGAGAAACTCTATACAGTTGCTGGTaGGATGGCAAACTGGTACAATTACTCTGGAAATCA | + |
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Preference number: 3 (lower is better) Translates to: GCVQRETLYSCW*DGKLVQLLWKS Trigger: TGATTTCCAGAGTAATTGTACCAGTTTGCCATCCCACCAGCAACTGTATAGAGTTTCTCTTTGCACACATCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR CCA 72 bp | CAAGGATGTGTGCAAAGAGAAACTCTATACAGTTGCTaGTGGGATGGCAAACTGGTACAATTACTCTGGAAA | + |
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Preference number: 3 (lower is better) Translates to: QGCVQRETLYSC*WDGKLVQLLWK Trigger: TTTCCAGAGTAATTGTACCAGTTTGCCATCCCACCAGCAACTGTATAGAGTTTCTCTTTGCACACATCCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR-3UTR CAA 90 bp | CTGTCCCTGTACCCCTCAACTATCCATTCTTCCATTCTTCTTGTGCAAAGTCTATCAACACGTTGGTCTTaGTTCTTCTTGAGTTTCATG | + |
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Preference number: 3 (lower is better) Translates to: LSLYPSTIHSSILLVQSLSTRWS*FFLSFM Trigger: CATGAAACTCAAGAAGAACAAAGACCAACGTGTTGA...TAGACTTTGCACAAGAAGAATGGAAGAATGGATAGTTGAGGGGTACAGGGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR GCA 72 bp | ACAAAGATAAAAATCTCAGGTGACAGCAAGGATGTGTaGAAAGAGAAACTCTATACAGTTGCTGGTGGGATG | + |
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Preference number: 3 (lower is better) Translates to: TKIKISGDSKDV*KEKLYTVAGGM Trigger: CATCCCACCAGCAACTGTATAGAGTTTCTCTTTGCACACATCCTTGCTGTCACCTGAGATTTTTATCTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR CCA 72 bp | TGTGCAAAGAGAAACTCTATACAGTTGCTGGTGGGATaGCAAACTGGTACAATTACTCTGGAAATCAATCTG | + |
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Preference number: 3 (lower is better) Translates to: CAKRNSIQLLVG*QTGTITLEINL Trigger: CAGATTGATTTCCAGAGTAATTGTACCAGTTTGCCATCCCACCAGCAACTGTATAGAGTTTCTCTTTGCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR-3UTR CAA 90 bp | GTAACTCCTTCTATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTATCAATGTTCAGAGGAAGATaGAGCTATGCCATTATCCAG | + |
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Preference number: 3 (lower is better) Translates to: VTPSMGVLFPILRRGKVSMFRGR*SYAIIQ Trigger: CTGGATAATGGCATAGCTCAATCTTCCTCTGAACAT...TGATACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATAGAAGGAGTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR-3UTR CAA 90 bp | AGAAACATGGATACAGAAAATGTGGTTCATTTACACAGTGGAATACTACTCAGCTGCCATTATCCAGCTTaGCATGTCACATGGATCTCA | + |
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Preference number: 3 (lower is better) Translates to: RNMDTENVVHLHSGILLSCHYPA*HVTWIS Trigger: TGAGATCCATGTGACATGCAAAGCTGGATAATGGCA...GCTGAGTAGTATTCCACTGTGTAAATGAACCACATTTTCTGTATCCATGTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| 3UTR-3UTR CAA 90 bp | GTAACTCCTTCTATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTATCATCAGGGAGCATCCCTTaGAGAAATTTTCTATCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: VTPSMGVLFPILRRGKVSSGSIP*RNFLSS Trigger: ACTTGATAGAAAATTTCTCAAAGGGATGCTCCCTGA...TGATACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATAGAAGGAGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| 3UTR GCA 72 bp | CCTGCTCTGAAGTCACGACAACGTTCTTACTCTCAATaGCTTTTCTCTGAAAGCTATACTTATACTTCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: PALKSRQRSYSQ*LFSESYTYTSK Trigger: CTTAGAAGTATAAGTATAGCTTTCAGAGAAAAGGCATTGAGAGTAAGAACGTTGTCGTGACTTCAGAGCAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| 3UTR TCA 72 bp | GTATGCCCCAGTAATGAAAACAGGACTCAGTTAATATaGTTACATGCTGTGCACCTAGAATGGACAAATCTA | + |
|
Preference number: 3 (lower is better) Translates to: VCPSNENRTQLI*LHAVHLEWTNL Trigger: TAGATTTGTCCATTCTAGGTGCACAGCATGTAATCATATTAACTGAGTCCTGTTTTCATTACTGGGGCATAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| 3UTR TCA 72 bp | TACTTATCTAAGTCTAAGTTACTATGCTTATGTAGGTaGCATGCCTTCTCTGTTCTTCTGAGTCCAGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: YLSKSKLLCLCR*HAFSVLLSPET Trigger: AGTCTCTGGACTCAGAAGAACAGAGAAGGCATGTCACCTACATAAGCATAGTAACTTAGACTTAGATAAGTA 39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| 3UTR TCA 72 bp | TACACCAATCTGAACAACAAAGATAAAAATCTCAGGTaGCAGCAAGGATGTGTGCAAAGAGAAACTCTATAC | + |
|
Preference number: 3 (lower is better) Translates to: YTNLNNKDKNLR*QQGCVQRETLY Trigger: GTATAGAGTTTCTCTTTGCACACATCCTTGCTGTCACCTGAGATTTTTATCTTTGTTGTTCAGATTGGTGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| 3UTR TCA 72 bp | GGGGCAAAGTATCAACACGTTGGTCTTTGTTCTTCTTaGGTTTCATGTGTTTTGCAAATTGTATCTCATATC | + |
|
Preference number: 3 (lower is better) Translates to: GAKYQHVGLCSS*VSCVLQIVSHI Trigger: GATATGAGATACAATTTGCAAAACACATGAAACTCAAGAAGAACAAAGACCAACGTGTTGATACTTTGCCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| 3UTR CCA 72 bp | ATTAAGAATGATGACATCCTGAGTTTTGAAGGCAAATaGATGGAACTAGAAAATATCATCCTGAATGAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: IKNDDILSFEGK*MELENIILNEG Trigger: ACCCTCATTCAGGATGATATTTTCTAGTTCCATCCATTTGCCTTCAAAACTCAGGATGTCATCATTCTTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR TCA 90 bp | GTGGAGACAGTGGTACAGGGAGGAGTTATGGGATATGGAATAGGAGGAGCATGGCCAGAGACACCTGAATaGGGAAGCTCAGCTCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: VETVVQGGVMGYGIGGAWPETPE*GSSAPG Trigger: ACCGGGAGCTGAGCTTCCTCATTCAGGTGTCTCTGG...CCATGCTCCTCCTATTCCATATCCCATAACTCCTCCCTGTACCACTGTCTCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR TCA 90 bp | AAACTAGTATCTTCCACATCTATGAGACCCCTTAGAACTGCAGTTTCTCCAGGCATGGGCTGTCCCTGGTaGATCCCCTTCCGAGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KLVSSTSMRPLRTAVSPGMGCPW*IPFRVP Trigger: AGGGACTCGGAAGGGGATTCACCAGGGACAGCCCAT...GCCTGGAGAAACTGCAGTTCTAAGGGGTCTCATAGATGTGGAAGATACTAGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| 3UTR CAA 72 bp | GTCCCAGGGCTATCCCAACACCCAGAAATACCACTCTaGGGAATATACCCAAAAGATGCCTCACCATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VPGLSQHPEIPL*GIYPKDASPCH Trigger: GTGGCATGGTGAGGCATCTTTTGGGTATATTCCCAAGAGTGGTATTTCTGGGTGTTGGGATAGCCCTGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| 3UTR CAA 72 bp | TTTGCTAGGCCCCGGCATAGCCTCACAAGAGACAGTTaGAACAGGGTCCATACAGCAAAATCTTGCTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FARPRHSLTRDS*NRVHTAKSCWC Trigger: ACACCAGCAAGATTTTGCTGTATGGACCCTGTTCAAACTGTCTCTTGTGAGGCTATGCCGGGGCCTAGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| 3UTR CAA 72 bp | CATCCAATAGCTGACTGTGAGTATCCACTTCTGTGTTaGCTAGGCCCCGGCATAGCCTCACAAGAGACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: HPIADCEYPLLC*LGPGIASQETV Trigger: AACTGTCTCTTGTGAGGCTATGCCGGGGCCTAGCAAACACAGAAGTGGATACTCACAGTCAGCTATTGGATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR GCA 90 bp | AGGGAGCTAGATAAAATGCCCAACAGTAGGCAGAGGGAACTTATAGATGCCCACCATTGTATGGCACAGTaGTGTTGGGCCAGGTACAGT | + |
|
Preference number: 4 (lower is better) Translates to: RELDKMPNSRQRELIDAHHCMAQ*CWARYS Trigger: ACTGTACCTGGCCCAACAGCACTGTGCCATACAATG...GTGGGCATCTATAAGTTCCCTCTGCCTACTGTTGGGCATTTTATCTAGCTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR GCA 90 bp | AACAGTAGGCAGAGGGAACTTATAGATGCCCACCTTCAACAGGAAGACAGGGCAATACACAACAGTGACTaGCAAGACCACAAGAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NSRQRELIDAHLQQEDRAIHNSD*QDHKSS Trigger: GGAGCTCTTGTGGTCTTGGCAGTCACTGTTGTGTAT...TGCCCTGTCTTCCTGTTGAAGGTGGGCATCTATAAGTTCCCTCTGCCTACTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| 3UTR CAA 72 bp | AAGAGACAGTTTGAACAGGGTCCATACAGCAAAATCTaGCTGGTGTATGCAATGGTGTCGGCGTTTGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KRQFEQGPYSKI*LVYAMVSAFGG Trigger: GCCTCCAAACGCCGACACCATTGCATACACCAGCAAGATTTTGCTGTATGGACCCTGTTCAAACTGTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCTAGATAAAATGCCCAACAGTAGGCAGAGGGAACTTATAGATGCCCACTCACATACACAACAGTaGCTGCCAAGACCACAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RELDKMPNSRQRELIDAHSHTQQ*LPRPQE Trigger: CTCTTGTGGTCTTGGCAGTCACTGTTGTGTATGTGA...GTGGGCATCTATAAGTTCCCTCTGCCTACTGTTGGGCATTTTATCTAGCTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR TCA 90 bp | AAACTAGTATCTTCCACATCTATGAGACCCCTTAGAACTGCAGTTTCTCCAGGCATTCCCAGAGACACCTaGATGAGGAAGCTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLVSSTSMRPLRTAVSPGIPRDT*MRKLSS Trigger: GGAGCTGAGCTTCCTCATTCAGGTGTCTCTGGGAAT...GCCTGGAGAAACTGCAGTTCTAAGGGGTCTCATAGATGTGGAAGATACTAGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCTAGATAAAATGCCCAACAGTAGGCAGAGGGAACTTATAGATGCCCACTGGATGATAGCACTGTaGTTCCCAGAGACACCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RELDKMPNSRQRELIDAHWMIAL*FPETPE Trigger: TTCAGGTGTCTCTGGGAATCACAGTGCTATCATCCA...GTGGGCATCTATAAGTTCCCTCTGCCTACTGTTGGGCATTTTATCTAGCTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR GCA 90 bp | AACAGTAGGCAGAGGGAACTTATAGATGCCCACCTTCAACAGGAAGACAGGGCAGTACTTTTCAGATCTTaGAGCTTCTCCTCTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: NSRQRELIDAHLQQEDRAVLFRS*SFSSPV Trigger: CACTGGAGAGGAGAAGCTGCAAGATCTGAAAAGTAC...TGCCCTGTCTTCCTGTTGAAGGTGGGCATCTATAAGTTCCCTCTGCCTACTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| 3UTR CAA 72 bp | TGTTCCACTTATAGGGTTGAAGATCCCTTTAGCTCTTaGGGTACTTTCTCTAGCTCCTCCATTGGGTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CSTYRVEDPFSS*GTFSSSSIGCP Trigger: AGGGCACCCAATGGAGGAGCTAGAGAAAGTACCCAAAGAGCTAAAGGGATCTTCAACCCTATAAGTGGAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR TCA 90 bp | AGGGAGCTAGATAAAATGCCCAACAGTAGGCAGAGGGAACTTATAGATGCCCACAAACGATCTATCGCATaGGCCAAAAGATACACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RELDKMPNSRQRELIDAHKRSIA*AKRYTA Trigger: AGCTGTGTATCTTTTGGCTCATGCGATAGATCGTTT...GTGGGCATCTATAAGTTCCCTCTGCCTACTGTTGGGCATTTTATCTAGCTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR TCA 90 bp | AAACTAGTATCTTCCACATCTATGAGACCCCTTAGAACTGCAGTTTCTCCAGGCTTTCCACAGCCACATTaGATTTGCCTTTGGTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLVSSTSMRPLRTAVSPGFPQPH*ICLWCP Trigger: TGGGCACCAAAGGCAAATTCAATGTGGCTGTGGAAA...GCCTGGAGAAACTGCAGTTCTAAGGGGTCTCATAGATGTGGAAGATACTAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR GCA 90 bp | AACAGTAGGCAGAGGGAACTTATAGATGCCCACCTTCAACAGGAAGACAGGGCAAACACTTCTTGGTACTaGAAATCCAATAGTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: NSRQRELIDAHLQQEDRANTSWY*KSNSST Trigger: GGTGGAACTATTGGATTTGCAGTACCAAGAAGTGTT...TGCCCTGTCTTCCTGTTGAAGGTGGGCATCTATAAGTTCCCTCTGCCTACTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAGCTAGATAAAATGCCCAACAGTAGGCAGAGGGAACTTATAGATGCCCACATCAGAGTCACTTGTTaGCATGGTCCTATAGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: RELDKMPNSRQRELIDAHIRVTC*HGPIVN Trigger: GTTCACTATAGGACCATGCCAACAAGTGACTCTGAT...GTGGGCATCTATAAGTTCCCTCTGCCTACTGTTGGGCATTTTATCTAGCTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCTGTACCCCTCAACTATCCATTCTTCCATTCTTCTTGTGCAAAGTCTAAGCCCAGAGTGTGATTaGGCAAAATATCCTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLYPSTIHSSILLVQSLSPECD*AKYPSS Trigger: AGAGGAAGGATATTTTGCCCAATCACACTCTGGGCT...TAGACTTTGCACAAGAAGAATGGAAGAATGGATAGTTGAGGGGTACAGGGACAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| 3UTR CAA 72 bp | ACAGCAAGGATGTGTGCAAAGAGAAACTCTATACAGTaGCTGGTGGGATGGCAAACTGGTACAATTACTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TARMCAKRNSIQ*LVGWQTGTITL Trigger: CAGAGTAATTGTACCAGTTTGCCATCCCACCAGCAACTGTATAGAGTTTCTCTTTGCACACATCCTTGCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCCCTGTACCCCTCAACTATCCATTCTTCCATTCTTCTTGTGCAAAGTCTAATGACTCCATTGCTTTaGTGGTGGAGAAACAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLYPSTIHSSILLVQSLMTPLL*WWRNSC Trigger: ACAACTGTTTCTCCACCACCAAAGCAATGGAGTCAT...TAGACTTTGCACAAGAAGAATGGAAGAATGGATAGTTGAGGGGTACAGGGACAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR GCA 90 bp | GTAACTCCTTCTATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTATCAGCAAGGAATTCCACATaGTTTGGCACACACTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTPSMGVLFPILRRGKVSARNST*FGTHLF Trigger: GAACAAGTGTGTGCCAAAGCATGTGGAATTCCTTGC...TGATACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATAGAAGGAGTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR CCA 90 bp | GTAACTCCTTCTATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTATCACCATTGCTTTGGTGGTaGAGAAACAGTTGTCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VTPSMGVLFPILRRGKVSPLLWW*RNSCQR Trigger: TCTTTGACAACTGTTTCTCCACCACCAAAGCAATGG...TGATACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATAGAAGGAGTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR CCA 90 bp | AGAAACATGGATACAGAAAATGTGGTTCATTTACACAGTGGAATACTACTCAGCAAGCAACACAAAGGTTaGCCCTCTCCATTTCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RNMDTENVVHLHSGILLSKQHKG*PSPFLP Trigger: GGGAAGAAATGGAGAGGGCCAACCTTTGTGTTGCTT...GCTGAGTAGTATTCCACTGTGTAAATGAACCACATTTTCTGTATCCATGTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR GCA 90 bp | CTGTCCCTGTACCCCTCAACTATCCATTCTTCCATTCTTCTTGTGCAAAGTCTATATCACTGGGTATTGTaGGTAGAATGTATGGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LSLYPSTIHSSILLVQSLYHWVL*VECMEI Trigger: AATTTCCATACATTCTACGCACAATACCCAGTGATA...TAGACTTTGCACAAGAAGAATGGAAGAATGGATAGTTGAGGGGTACAGGGACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| 3UTR CAA 72 bp | GTTCCCAATTCTAAGAAGGGGCAAAGTATCAACACGTaGGTCTTTGTTCTTCTTGAGTTTCATGTGTTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPNSKKGQSINT*VFVLLEFHVFC Trigger: GCAAAACACATGAAACTCAAGAAGAACAAAGACCAACGTGTTGATACTTTGCCCCTTCTTAGAATTGGGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| 3UTR CAA 72 bp | CCAAACTTTGTCTCTGTAACTCCTTCTATGGGTGTTTaGTTCCCAATTCTAAGAAGGGGCAAAGTATCAACA | + |
|
Preference number: 4 (lower is better) Translates to: PNFVSVTPSMGV*FPILRRGKVST Trigger: TGTTGATACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATAGAAGGAGTTACAGAGACAAAGTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| 3UTR CAA 72 bp | CCAAACATCACACTCATCAAACTAACATCCCCTTACTaGTTCTGGGAAAATAACTGTAAGCTTTCTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PNITLIKLTSPY*FWENNCKLSLK Trigger: TTTCAAAGAAAGCTTACAGTTATTTTCCCAGAACAAGTAAGGGGATGTTAGTTTGATGAGTGTGATGTTTGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| 3UTR CAA 72 bp | ATTCTAAGAAGGGGCAAAGTATCAACACGTTGGTCTTaGTTCTTCTTGAGTTTCATGTGTTTTGCAAATTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILRRGKVSTRWS*FFLSFMCFANC Trigger: ACAATTTGCAAAACACATGAAACTCAAGAAGAACAAAGACCAACGTGTTGATACTTTGCCCCTTCTTAGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| 3UTR CAA 72 bp | AAACTGGTACAATTACTCTGGAAATCAATCTGGAGTTaGTTCAGAAAATTGGAAATAGAACTACCTGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: KLVQLLWKSIWS*FRKLEIELPED Trigger: GTCTTCAGGTAGTTCTATTTCCAATTTTCTGAACAAACTCCAGATTGATTTCCAGAGTAATTGTACCAGTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS CCA 90 bp | AAGCTCAGCTCCCGGTCATTGGCTTTCACCAATGGAGTGTGCCTGTaGATCACATACACAACAGTGACTGCCAAGACCACAAGAGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KLSSRSLAFTNGVCL*ITYTTVTAKTTRAP Trigger: TGGAGCTCTTGTGGTCTTGGCAGTCACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
||
| CDS CCA 90 bp | CACCTGAATGAGGAAGCTCAGCTCCCGGTCATTGGCTTTCACCAATaGAGTGTGCCTGTGGATCACATACACAACAGTGACTGCCAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: HLNEEAQLPVIGFHQ*SVPVDHIHNSDCQD Trigger: GTCTTGGCAGTCACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTTCCTCATTCAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
||
| CDS GCA 90 bp | ATGAGGAAGCTCAGCTCCCGGTCATTGGCTTTCACCAATGGAGTGTaGCTGTGGATCACATACACAACAGTGACTGCCAAGACCACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: MRKLSSRSLAFTNGV*LWITYTTVTAKTTR Trigger: TCTTGTGGTCTTGGCAGTCACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTTCCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
||
| CDS-3UTR CAA 90 bp | GTGGAGACAGTGGTACAGGGAGGAGTTATGGGATATGGAATAGGAGGAGCATGGCTGAAGATGACTCCATaGCTTTGGTGGTGGAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: VETVVQGGVMGYGIGGAWLKMTP*LWWWRN Trigger: GTTTCTCCACCACCAAAGCAATGGAGTCATCTTCAG...CCATGCTCCTCCTATTCCATATCCCATAACTCCTCCCTGTACCACTGTCTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS-3UTR CAA 90 bp | GTGGAGACAGTGGTACAGGGAGGAGTTATGGGATATGGAATAGGAGGAGCATGGTATGGCACAGTGCTGTaGGGCCAGGTACAGTTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: VETVVQGGVMGYGIGGAWYGTVL*GQVQLK Trigger: TTTTAACTGTACCTGGCCCAACAGCACTGTGCCATA...CCATGCTCCTCCTATTCCATATCCCATAACTCCTCCCTGTACCACTGTCTCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS TCA 90 bp | CCTATGAACAACATGGATGATAGCACTGTGATTCCCAGAGACACCTaGATGAGGAAGCTCAGCTCCCGGTCATTGGCTTTCACCAATGGA | + |
|
Preference number: 5 (lower is better) Translates to: PMNNMDDSTVIPRDT*MRKLSSRSLAFTNG Trigger: TCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTTCCTCATTCAGGTGTCTCTGGGAATCACAGTGCTATCATCCATGTTGTTCATAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
||
| CDS CCA 90 bp | CCTGCCCTGTTAGAAACACTGAAGATGACTCCATTGCTTTGGTGGTaGAGAAACAGTTGTCAAAGATCTGGTAGCCCAGAGTGTGATTGG | + |
|
Preference number: 5 (lower is better) Translates to: PALLETLKMTPLLWW*RNSCQRSGSPECDW Trigger: CCAATCACACTCTGGGCTACCAGATCTTTGACAACTGTTTCTCCACCACCAAAGCAATGGAGTCATCTTCAGTGTTTCTAACAGGGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
||
| CDS CCA 90 bp | CGTCCTGCCCTGTTAGAAACACTGAAGATGACTCCATTGCTTTGGTaGTGGAGAAACAGTTGTCAAAGATCTGGTAGCCCAGAGTGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RPALLETLKMTPLLW*WRNSCQRSGSPECD Trigger: ATCACACTCTGGGCTACCAGATCTTTGACAACTGTTTCTCCACCACCAAAGCAATGGAGTCATCTTCAGTGTTTCTAACAGGGCAGGACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
||
| CDS CCA 90 bp | CAAGGAATTCCACATGCTTTGGCACACACTTGTTCTTCTCCGCATTaGACCAGTCATTTTCCCCACATGGATCACATAGCCTTTGACCTG | + |
|
Preference number: 5 (lower is better) Translates to: QGIPHALAHTCSSPH*TSHFPHMDHIAFDL Trigger: CAGGTCAAAGGCTATGTGATCCATGTGGGGAAAATGACTGGTCCAATGCGGAGAAGAACAAGTGTGTGCCAAAGCATGTGGAATTCCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
||
| CDS-3UTR CAA 90 bp | AGGGAGCTAGATAAAATGCCCAACAGTAGGCAGAGGGAACTTATAGATGCCCACGGTACTTTTCAGATCTaGCAGCTTCTCCTCTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RELDKMPNSRQRELIDAHGTFQI*QLLLSS Trigger: ACTGGAGAGGAGAAGCTGCAAGATCTGAAAAGTACC...GTGGGCATCTATAAGTTCCCTCTGCCTACTGTTGGGCATTTTATCTAGCTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
||
| CDS TCA 90 bp | TCCGCATTGGACCAGTCATTTTCCCCACATGGATCACATAGCCTTTaGCCTGGTTTCTCTGACACATATCCATCAGTACATGGGATGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SALDQSFSPHGSHSL*PGFSDTYPSVHGMQ Trigger: TTGCATCCCATGTACTGATGGATATGTGTCAGAGAAACCAGGTCAAAGGCTATGTGATCCATGTGGGGAAAATGACTGGTCCAATGCGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
||
| CDS CCA 90 bp | TCTGTCTTCTTTACCAGTCATATTCACTCGGTGGTCCACATTGTATaGCACAGTGCTGTTGGGCCAGGTACAGTTAAAAGCAGTTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SVFFTSHIHSVVHIV*HSAVGPGTVKSSLP Trigger: TGGCAAACTGCTTTTAACTGTACCTGGCCCAACAGCACTGTGCCATACAATGTGGACCACCGAGTGAATATGACTGGTAAAGAAGACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS-3UTR CAA 90 bp | AACAGTAGGCAGAGGGAACTTATAGATGCCCACCTTCAACAGGAAGACAGGGCACTCTCATTAATCTCCTaGATGGTGTGGATCATGGTT | + |
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Preference number: 5 (lower is better) Translates to: NSRQRELIDAHLQQEDRALSLIS*MVWIMV Trigger: AACCATGATCCACACCATCAAGGAGATTAATGAGAG...TGCCCTGTCTTCCTGTTGAAGGTGGGCATCTATAAGTTCCCTCTGCCTACTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| CDS-3UTR CAA 90 bp | CTGTCCCTGTACCCCTCAACTATCCATTCTTCCATTCTTCTTGTGCAAAGTCTATGCTTTGGCACACACTaGTTCTTCTCCGCATTGGAC | + |
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Preference number: 5 (lower is better) Translates to: LSLYPSTIHSSILLVQSLCFGTH*FFSALD Trigger: GTCCAATGCGGAGAAGAACAAGTGTGTGCCAAAGCA...TAGACTTTGCACAAGAAGAATGGAAGAATGGATAGTTGAGGGGTACAGGGACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| CDS-3UTR CAA 90 bp | CTGTCCCTGTACCCCTCAACTATCCATTCTTCCATTCTTCTTGTGCAAAGTCTAAAAGCAACACAAAGGTaGGCCCTCTCCATTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: LSLYPSTIHSSILLVQSLKATQR*ALSISS Trigger: GGAAGAAATGGAGAGGGCCAACCTTTGTGTTGCTTT...TAGACTTTGCACAAGAAGAATGGAAGAATGGATAGTTGAGGGGTACAGGGACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| CDS-3UTR CAA 90 bp | AAACTAGTATCTTCCACATCTATGAGACCCCTTAGAACTGCAGTTTCTCCAGGCCTGGAGGACACACTTTaGTGCAGACTGAATCTGGAA | + |
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Preference number: 5 (lower is better) Translates to: KLVSSTSMRPLRTAVSPGLEDTL*CRLNLE Trigger: TTCCAGATTCAGTCTGCACAAAAGTGTGTCCTCCAG...GCCTGGAGAAACTGCAGTTCTAAGGGGTCTCATAGATGTGGAAGATACTAGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| CDS GCA 90 bp | TATCCAGATAGGTACTTTTCAGATCTTGCAGCTTCTCCTCTCCAGTaGAGAGCTGATCAGACATGTCATACAGTCTGTCTTCTTTACCAG | + |
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Preference number: 5 (lower is better) Translates to: YPDRYFSDLAASPLQ*RADQTCHTVCLLYQ Trigger: CTGGTAAAGAAGACAGACTGTATGACATGTCTGATCAGCTCTGCACTGGAGAGGAGAAGCTGCAAGATCTGAAAAGTACCTATCTGGATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS CCA 90 bp | GACCAGCATTCCAAAAGTGATACATTTACCTTCATAATAGTTATCTaGCAGCTGGCGAGCCACAAAGGTGGTAACAAAACACAGCAGAGC | + |
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Preference number: 5 (lower is better) Translates to: DQHSKSDTFTFIIVI*QLASHKGGNKTQQS Trigger: GCTCTGCTGTGTTTTGTTACCACCTTTGTGGCTCGCCAGCTGCCAGATAACTATTATGAAGGTAAATGTATCACTTTTGGAATGCTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS-3UTR CAA 90 bp | AAACTAGTATCTTCCACATCTATGAGACCCCTTAGAACTGCAGTTTCTCCAGGCGGAATTCCACATGCTTaGGCACACACTTGTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: KLVSSTSMRPLRTAVSPGGIPHA*AHTCSS Trigger: AGAAGAACAAGTGTGTGCCAAAGCATGTGGAATTCC...GCCTGGAGAAACTGCAGTTCTAAGGGGTCTCATAGATGTGGAAGATACTAGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| CDS-3UTR CAA 90 bp | GTAACTCCTTCTATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTATCAGATGACTCCATTGCTTaGGTGGTGGAGAAACAGTTG | + |
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Preference number: 5 (lower is better) Translates to: VTPSMGVLFPILRRGKVSDDSIA*VVEKQL Trigger: CAACTGTTTCTCCACCACCAAAGCAATGGAGTCATC...TGATACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATAGAAGGAGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| CDS-3UTR CAA 90 bp | GTAACTCCTTCTATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTATCAATTTCCACAGCCACATaGAATTTGCCTTTGGTGCCC | + |
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Preference number: 5 (lower is better) Translates to: VTPSMGVLFPILRRGKVSISTAT*NLPLVP Trigger: GGGCACCAAAGGCAAATTCAATGTGGCTGTGGAAAT...TGATACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATAGAAGGAGTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| CDS GCA 90 bp | AGAAATTTTCCAGTGCTGTTTCTCCAGTTAGATTTGTATTCGTCCTaGCCTGTTAGAAACACTGAAGATGACTCCATTGCTTTGGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: RNFPVLFLQLDLYSS*PVRNTEDDSIALVV Trigger: CACCACCAAAGCAATGGAGTCATCTTCAGTGTTTCTAACAGGGCAGGACGAATACAAATCTAACTGGAGAAACAGCACTGGAAAATTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS-3UTR CAA 90 bp | AAACTAGTATCTTCCACATCTATGAGACCCCTTAGAACTGCAGTTTCTCCAGGCACAGTTAAAAGCAGTTaGCCAGAATTCAATGGTCAA | + |
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Preference number: 5 (lower is better) Translates to: KLVSSTSMRPLRTAVSPGTVKSS*PEFNGQ Trigger: TTGACCATTGAATTCTGGCAAACTGCTTTTAACTGT...GCCTGGAGAAACTGCAGTTCTAAGGGGTCTCATAGATGTGGAAGATACTAGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| CDS-3UTR CAA 90 bp | AGAAACATGGATACAGAAAATGTGGTTCATTTACACAGTGGAATACTACTCAGCCCTCATCAGAGTCACTaGTTGGCATGGTCCTATAGT | + |
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Preference number: 5 (lower is better) Translates to: RNMDTENVVHLHSGILLSPHQSH*LAWSYS Trigger: ACTATAGGACCATGCCAACAAGTGACTCTGATGAGG...GCTGAGTAGTATTCCACTGTGTAAATGAACCACATTTTCTGTATCCATGTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| CDS-3UTR CAA 90 bp | GTAACTCCTTCTATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGTATCACCAGTCAAATTAAATTaGCGCAACAACCTGCATGTA | + |
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Preference number: 5 (lower is better) Translates to: VTPSMGVLFPILRRGKVSPVKLN*RNNLHV Trigger: TACATGCAGGTTGTTGCGCAAATTTAATTTGACTGG...TGATACTTTGCCCCTTCTTAGAATTGGGAACAAAACACCCATAGAAGGAGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| CDS-3UTR CAA 90 bp | AGAAACATGGATACAGAAAATGTGGTTCATTTACACAGTGGAATACTACTCAGCCATCAGAGTCACTTGTaGGCATGGTCCTATAGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: RNMDTENVVHLHSGILLSHQSHL*AWSYSE Trigger: TTCACTATAGGACCATGCCAACAAGTGACTCTGATG...GCTGAGTAGTATTCCACTGTGTAAATGAACCACATTTTCTGTATCCATGTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| CDS-3UTR CAA 90 bp | AGAAACATGGATACAGAAAATGTGGTTCATTTACACAGTGGAATACTACTCAGCCAAAAGATACACAGCTaGTCTGACATTGTTTGTGAT | + |
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Preference number: 5 (lower is better) Translates to: RNMDTENVVHLHSGILLSQKIHS*SDIVCD Trigger: ATCACAAACAATGTCAGACAAGCTGTGTATCTTTTG...GCTGAGTAGTATTCCACTGTGTAAATGAACCACATTTTCTGTATCCATGTTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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| CDS GCA 72 bp | CTCAGCTCCCGGTCATTGGCTTTCACCAATGGAGTGTaGCTGTGGATCACATACACAACAGTGACTGCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LSSRSLAFTNGV*LWITYTTVTAK Trigger: CTTGGCAGTCACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS CCA 72 bp | GAGGAAGCTCAGCTCCCGGTCATTGGCTTTCACCAATaGAGTGTGCCTGTGGATCACATACACAACAGTGAC | + |
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Preference number: 6 (lower is better) Translates to: EEAQLPVIGFHQ*SVPVDHIHNSD Trigger: GTCACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGGGAGCTGAGCTTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS CCA 72 bp | TCCCGGTCATTGGCTTTCACCAATGGAGTGTGCCTGTaGATCACATACACAACAGTGACTGCCAAGACCACA | + |
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Preference number: 6 (lower is better) Translates to: SRSLAFTNGVCL*ITYTTVTAKTT Trigger: TGTGGTCTTGGCAGTCACTGTTGTGTATGTGATCCACAGGCACACTCCATTGGTGAAAGCCAATGACCGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS TCA 72 bp | AACATGGATGATAGCACTGTGATTCCCAGAGACACCTaGATGAGGAAGCTCAGCTCCCGGTCATTGGCTTTC | + |
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Preference number: 6 (lower is better) Translates to: NMDDSTVIPRDT*MRKLSSRSLAF Trigger: GAAAGCCAATGACCGGGAGCTGAGCTTCCTCATTCAGGTGTCTCTGGGAATCACAGTGCTATCATCCATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS CAA 72 bp | TTCACTCGGTGGTCCACATTGTATGGCACAGTGCTGTaGGGCCAGGTACAGTTAAAAGCAGTTTGCCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: FTRWSTLYGTVL*GQVQLKAVCQN Trigger: ATTCTGGCAAACTGCTTTTAACTGTACCTGGCCCAACAGCACTGTGCCATACAATGTGGACCACCGAGTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS CAA 72 bp | TCCACATGCTTTGGCACACACTTGTTCTTCTCCGCATaGGACCAGTCATTTTCCCCACATGGATCACATAGC | + |
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Preference number: 6 (lower is better) Translates to: STCFGTHLFFSA*DQSFSPHGSHS Trigger: GCTATGTGATCCATGTGGGGAAAATGACTGGTCCAATGCGGAGAAGAACAAGTGTGTGCCAAAGCATGTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS CAA 90 bp | CCAGTCATATTCACTCGGTGGTCCACATTGTATGGCACAGTGCTGTaGGGCCAGGTACAGTTAAAAGCAGTTTGCCAGAATTCAATGGTC | + |
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Preference number: 6 (lower is better) Translates to: PVIFTRWSTLYGTVL*GQVQLKAVCQNSMV Trigger: GACCATTGAATTCTGGCAAACTGCTTTTAACTGTACCTGGCCCAACAGCACTGTGCCATACAATGTGGACCACCGAGTGAATATGACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS GCA 72 bp | CACTTCCAGCACAAAGGGGCAGAGGTCAATGTCAGTTaGATAAAGCACAATGACTTTGGCAGTGGAACTCTT | + |
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Preference number: 6 (lower is better) Translates to: HFQHKGAEVNVS*IKHNDFGSGTL Trigger: AAGAGTTCCACTGCCAAAGTCATTGTGCTTTATGCAACTGACATTGACCTCTGCCCCTTTGTGCTGGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS GCA 72 bp | CTGGTTTCTCTGACACATATCCATCAGTACATGGGATaGAATCAAAGCAGCATATGGGCTGTCCCTGGTGAA | + |
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Preference number: 6 (lower is better) Translates to: LVSLTHIHQYMG*NQSSIWAVPGE Trigger: TTCACCAGGGACAGCCCATATGCTGCTTTGATTGCATCCCATGTACTGATGGATATGTGTCAGAGAAACCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS CAA 72 bp | TCTTCTTTACCAGTCATATTCACTCGGTGGTCCACATaGTATGGCACAGTGCTGTTGGGCCAGGTACAGTTA | + |
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Preference number: 6 (lower is better) Translates to: SSLPVIFTRWST*YGTVLLGQVQL Trigger: TAACTGTACCTGGCCCAACAGCACTGTGCCATACAATGTGGACCACCGAGTGAATATGACTGGTAAAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS CAA 90 bp | TACAGTCTGTCTTCTTTACCAGTCATATTCACTCGGTGGTCCACATaGTATGGCACAGTGCTGTTGGGCCAGGTACAGTTAAAAGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: YSLSSLPVIFTRWST*YGTVLLGQVQLKAV Trigger: AACTGCTTTTAACTGTACCTGGCCCAACAGCACTGTGCCATACAATGTGGACCACCGAGTGAATATGACTGGTAAAGAAGACAGACTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS TCA 72 bp | TTCAGATCTTGCAGCTTCTCCTCTCCAGTGCAGAGCTaGTCAGACATGTCATACAGTCTGTCTTCTTTACCA | + |
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Preference number: 6 (lower is better) Translates to: FRSCSFSSPVQS*SDMSYSLSSLP Trigger: TGGTAAAGAAGACAGACTGTATGACATGTCTGATCAGCTCTGCACTGGAGAGGAGAAGCTGCAAGATCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS GCA 72 bp | AGGTACTTTTCAGATCTTGCAGCTTCTCCTCTCCAGTaGAGAGCTGATCAGACATGTCATACAGTCTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: RYFSDLAASPLQ*RADQTCHTVCL Trigger: AAGACAGACTGTATGACATGTCTGATCAGCTCTGCACTGGAGAGGAGAAGCTGCAAGATCTGAAAAGTACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS CAA 90 bp | ATTTGTATTCGTCCTGCCCTGTTAGAAACACTGAAGATGACTCCATaGCTTTGGTGGTGGAGAAACAGTTGTCAAAGATCTGGTAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: ICIRPALLETLKMTP*LWWWRNSCQRSGSP Trigger: TGGGCTACCAGATCTTTGACAACTGTTTCTCCACCACCAAAGCAATGGAGTCATCTTCAGTGTTTCTAACAGGGCAGGACGAATACAAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS CAA 90 bp | ATTGTATGGCACAGTGCTGTTGGGCCAGGTACAGTTAAAAGCAGTTaGCCAGAATTCAATGGTCAAGACATCATTTGGATCCTTGCTAGG | + |
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Preference number: 6 (lower is better) Translates to: IVWHSAVGPGTVKSS*PEFNGQDIIWILAR Trigger: CCTAGCAAGGATCCAAATGATGTCTTGACCATTGAATTCTGGCAAACTGCTTTTAACTGTACCTGGCCCAACAGCACTGTGCCATACAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS TCA 72 bp | GACCAGTCATTTTCCCCACATGGATCACATAGCCTTTaGCCTGGTTTCTCTGACACATATCCATCAGTACAT | + |
|
Preference number: 6 (lower is better) Translates to: DQSFSPHGSHSL*PGFSDTYPSVH Trigger: ATGTACTGATGGATATGTGTCAGAGAAACCAGGTCAAAGGCTATGTGATCCATGTGGGGAAAATGACTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS GCA 72 bp | ACAGTGCTGTTGGGCCAGGTACAGTTAAAAGCAGTTTaGCAGAATTCAATGGTCAAGACATCATTTGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: TVLLGQVQLKAV*QNSMVKTSFGS Trigger: GGATCCAAATGATGTCTTGACCATTGAATTCTGGCAAACTGCTTTTAACTGTACCTGGCCCAACAGCACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS CCA 72 bp | CTGTTAGAAACACTGAAGATGACTCCATTGCTTTGGTaGTGGAGAAACAGTTGTCAAAGATCTGGTAGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLETLKMTPLLW*WRNSCQRSGSP Trigger: TGGGCTACCAGATCTTTGACAACTGTTTCTCCACCACCAAAGCAATGGAGTCATCTTCAGTGTTTCTAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS GCA 72 bp | GAATCTCACTCCATATTTTCCATAATCATCATCAGATaGAATAGCACCTACCCAGACCCAACCAAAGTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ESHSIFSIIIIR*NSTYPDPTKVS Trigger: AGACACTTTGGTTGGGTCTGGGTAGGTGCTATTGCATCTGATGATGATTATGGAAAATATGGAGTGAGATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS CCA 72 bp | TCCAAAAGTGATACATTTACCTTCATAATAGTTATCTaGCAGCTGGCGAGCCACAAAGGTGGTAACAAAACA | + |
|
Preference number: 6 (lower is better) Translates to: SKSDTFTFIIVI*QLASHKGGNKT Trigger: TGTTTTGTTACCACCTTTGTGGCTCGCCAGCTGCCAGATAACTATTATGAAGGTAAATGTATCACTTTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS CAA 72 bp | ACTAGAAATTTTCCAGTGCTGTTTCTCCAGTTAGATTaGTATTCGTCCTGCCCTGTTAGAAACACTGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: TRNFPVLFLQLD*YSSCPVRNTED Trigger: ATCTTCAGTGTTTCTAACAGGGCAGGACGAATACAAATCTAACTGGAGAAACAGCACTGGAAAATTTCTAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS CAA 72 bp | TACTGCACTTTCCCTATATTCTTCTCTTATGTCAGCTaGGCTAAAACGATCTATCGCATGAGCCAAAAGATA | + |
|
Preference number: 6 (lower is better) Translates to: YCTFPIFFSYVS*AKTIYRMSQKI Trigger: TATCTTTTGGCTCATGCGATAGATCGTTTTAGCCAAGCTGACATAAGAGAAGAATATAGGGAAAGTGCAGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS CAA 90 bp | ATAATTCCAACTAGAAATTTTCCAGTGCTGTTTCTCCAGTTAGATTaGTATTCGTCCTGCCCTGTTAGAAACACTGAAGATGACTCCATT | + |
|
Preference number: 6 (lower is better) Translates to: IIPTRNFPVLFLQLD*YSSCPVRNTEDDSI Trigger: AATGGAGTCATCTTCAGTGTTTCTAACAGGGCAGGACGAATACAAATCTAACTGGAGAAACAGCACTGGAAAATTTCTAGTTGGAATTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS GCA 72 bp | ATAAAGCACAATGACTTTGGCAGTGGAACTCTTTACTaGATCAACAGCTATTTTCATTTTCTCATTGGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: IKHNDFGSGTLY*INSYFHFLIGV Trigger: TACTCCAATGAGAAAATGAAAATAGCTGTTGATGCAGTAAAGAGTTCCACTGCCAAAGTCATTGTGCTTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000165012.3 ENSMUST00000176481.9 |
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| CDS CAA 72 bp | TGGTTTTCAACTTCTACATATCCAGTCAAATTAAATTaGCGCAACAACCTGCATGTAACATTCTGGTCAATA | + |
|
Preference number: 6 (lower is better) Translates to: WFSTSTYPVKLN*RNNLHVTFWSI Trigger: TATTGACCAGAATGTTACATGCAGGTTGTTGCGCAAATTTAATTTGACTGGATATGTAGAAGTTGAAAACCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176481.9 |
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