Pregenerated sensors for VMN2R58 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000090383Ensembl transcript IDs: ENSMUST00000171671.3, ENSMUST00000233081.2, ENSMUST00000233147.2, ENSMUST00000233177.2, ENSMUST00000233389.2, ENSMUST00000233957.2
Found 296 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCGGCACAGGGAATACAATCAAAGCAGCAGACAGCCTTGCCTTCCTaGACAGCTTTCCTGAATCCAGGCCTACAGCTCTTACTGCACACA | + |
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Preference number: 1 (lower is better) Translates to: SAQGIQSKQQTALPS*TAFLNPGLQLLLHT Trigger: TGTGTGCAGTAAGAGCTGTAGGCCTGGATTCAGGAAAGCTGTCCAGGAAGGCAAGGCTGTCTGCTGCTTTGATTGTATTCCCTGTGCCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR TCA 90 bp | TACAATCAAAGCAGCAGACAGCCTTGCCTTCCTGGACAGCTTTCCTaGATCCAGGCCTACAGCTCTTACTGCACACAGACTGAGGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: YNQSSRQPCLPGQLS*IQAYSSYCTQTEES Trigger: TGACTCCTCAGTCTGTGTGCAGTAAGAGCTGTAGGCCTGGATTCAGGAAAGCTGTCCAGGAAGGCAAGGCTGTCTGCTGCTTTGATTGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR TCA 90 bp | ACAGCTTTCCTGAATCCAGGCCTACAGCTCTTACTGCACACAGACTaGGGAGTCATTGTAAACCCTGTAGGCCACTGTATCATCTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: TAFLNPGLQLLLHTD*GVIVNPVGHCIICS Trigger: TGAACAGATGATACAGTGGCCTACAGGGTTTACAATGACTCCTCAGTCTGTGTGCAGTAAGAGCTGTAGGCCTGGATTCAGGAAAGCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR GCA 90 bp | ACTGTGGAGAGAGCCACAGTGAACAAAATTCCAAATGCTGTCTGCTaGAAGATGCAGGTTGTTGTGTTGGGCTGTCCAATGAAGAGGAAG | + |
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Preference number: 1 (lower is better) Translates to: TVERATVNKIPNAVC*KMQVVVLGCPMKRK Trigger: CTTCCTCTTCATTGGACAGCCCAACACAACAACCTGCATCTTGCAGCAGACAGCATTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR GCA 90 bp | AACACTGTGGAGAGAGCCACAGTGAACAAAATTCCAAATGCTGTCTaGTGCAAGATGCAGGTTGTTGTGTTGGGCTGTCCAATGAAGAGG | + |
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Preference number: 1 (lower is better) Translates to: NTVERATVNKIPNAV*CKMQVVVLGCPMKR Trigger: CCTCTTCATTGGACAGCCCAACACAACAACCTGCATCTTGCAGCAGACAGCATTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR CCA 90 bp | GATGATGTGGCCATGTTCAGTCTGAGTATCTTGATCAATGAAGGGTaGAGAGGTAACCAGCCAGATTCCACAGATAATAAGTTGGATCAG | + |
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Preference number: 1 (lower is better) Translates to: DDVAMFSLSILINEG*RGNQPDSTDNKLDQ Trigger: CTGATCCAACTTATTATCTGTGGAATCTGGCTGGTTACCTCTCCACCCTTCATTGATCAAGATACTCAGACTGAACATGGCCACATCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR TCA 90 bp | ATAGGCCAAAAAGCTCACAGATTTTTGGAGGCAGTGGCTCTTCTCTaGGTTTGCATAGTGACTTTCTGGACACTTCATGCACTGATACAT | + |
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Preference number: 1 (lower is better) Translates to: IGQKAHRFLEAVALL*VCIVTFWTLHALIH Trigger: ATGTATCAGTGCATGAAGTGTCCAGAAAGTCACTATGCAAACTCAGAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTTTTTGGCCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR CCA 90 bp | AGTGACTTTCTGGACACTTCATGCACTGATACATATCTGTCTCATTaGAAATCTCATTGTCGGCACAGGGAATACAATCAAAGCAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: SDFLDTSCTDTYLSH*KSHCRHREYNQSSR Trigger: TCTGCTGCTTTGATTGTATTCCCTGTGCCGACAATGAGATTTCCAATGAGACAGATATGTATCAGTGCATGAAGTGTCCAGAAAGTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR TCA 90 bp | TATCCAGAGAAAAAGGAACAAATTTTAAGGGTGAGTGTCCTCTTCTaGAGTCAGCTGTGTACAAAGTCAGTATTTGTCATTCTAGCAACA | + |
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Preference number: 1 (lower is better) Translates to: YPEKKEQILRVSVLF*SQLCTKSVFVILAT Trigger: TGTTGCTAGAATGACAAATACTGACTTTGTACACAGCTGACTTCAGAAGAGGACACTCACCCTTAAAATTTGTTCCTTTTTCTCTGGATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233147.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGACAAGAAGGCCATGGTGTAGCTACCAAGTGCTAAGGAGCAGAGGTATCTCCTGTTATTGGCCTTaGCGATGGGTGTGTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: SWTRRPWCSYQVLRSRGISCYWP*RWVCLC Trigger: ACAGAGACACACCCATCGTCAAGGCCAATAACAGGA...GATACCTCTGCTCCTTAGCACTTGGTAGCTACACCATGGCCTTCTTGTCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGCAAATTCCTGGACAAGAAGGCCATGGTGTAGCTACCAAGTGCTAAGGAGCTGCTGTGATGATGAGTaGCATTCCCAAAGGCTCATC | + |
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Preference number: 2 (lower is better) Translates to: QANSWTRRPWCSYQVLRSCCDDE*HSQRLI Trigger: GATGAGCCTTTGGGAATGGCACTCATCATCACAGCA...GCTCCTTAGCACTTGGTAGCTACACCATGGCCTTCTTGTCCAGGAATTTGCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | ACAATCAAAGCAGCAGACAGCCTTGCCTTCCTGGACAGCTTTCCTGAATCCAGGTCTCACCATTCTAGCTaGAACTGTGGCCTTGAATGC | + |
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Preference number: 2 (lower is better) Translates to: TIKAADSLAFLDSFPESRSHHSS*NCGLEC Trigger: GCATTCAAGGCCACAGTTCCAGCTAGAATGGTGAGA...CCTGGATTCAGGAAAGCTGTCCAGGAAGGCAAGGCTGTCTGCTGCTTTGATTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | ACAATCAAAGCAGCAGACAGCCTTGCCTTCCTGGACAGCTTTCCTGAATCCAGGTGTGAGTACAACAGGTaGCTTTCTCTTCTGTCCACA | + |
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Preference number: 2 (lower is better) Translates to: TIKAADSLAFLDSFPESRCEYNR*LSLLST Trigger: TGTGGACAGAAGAGAAAGTCACCTGTTGTACTCACA...CCTGGATTCAGGAAAGCTGTCCAGGAAGGCAAGGCTGTCTGCTGCTTTGATTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGCTCTTGATACCATTAACCATCTCACCATTCTAGCTGGAACTGTGGCCTTGTGCTGTGATGATGAGTaGCATTCCCAAAGGCTCATC | + |
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Preference number: 2 (lower is better) Translates to: GALDTINHLTILAGTVALCCDDE*HSQRLI Trigger: GATGAGCCTTTGGGAATGGCACTCATCATCACAGCA...CAAGGCCACAGTTCCAGCTAGAATGGTGAGATGGTTAATGGTATCAAGAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | GAATGTGTCAGGCAAATTCCTGGACAAGAAGGCCATGGTGTAGCTACCAAGTGCTCTCACCATTCTAGCTaGAACTGTGGCCTTGAATGC | + |
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Preference number: 2 (lower is better) Translates to: ECVRQIPGQEGHGVATKCSHHSS*NCGLEC Trigger: GCATTCAAGGCCACAGTTCCAGCTAGAATGGTGAGA...GCACTTGGTAGCTACACCATGGCCTTCTTGTCCAGGAATTTGCCTGACACATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAAATTCCTGGACAAGAAGGCCATGGTGTAGCTACCAAGTGCTAAGGAGCTTGATCAATGAAGGGTaGAGAGGTAACCAGCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: QANSWTRRPWCSYQVLRSLINEG*RGNQPD Trigger: ATCTGGCTGGTTACCTCTCCACCCTTCATTGATCAA...GCTCCTTAGCACTTGGTAGCTACACCATGGCCTTCTTGTCCAGGAATTTGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGCCAACACTGTGGAGAGAGCCACAGTGAACAAAATTCCAAATGCTGTCTGCACAGCCTTGCCTTCCTaGACAGCTTTCCTGAATCCA | + |
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Preference number: 2 (lower is better) Translates to: LANTVERATVNKIPNAVCTALPS*TAFLNP Trigger: TGGATTCAGGAAAGCTGTCCAGGAAGGCAAGGCTGT...GCAGACAGCATTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTGTTGGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCTTGAATGCAATAACTACTGTAATAGCTTTGGCCAACACTGTGGAGAGAGCTCCTGTTATTGGCCTTaGCGATGGGTGTGTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: GLECNNYCNSFGQHCGESSCYWP*RWVCLC Trigger: ACAGAGACACACCCATCGTCAAGGCCAATAACAGGA...GCTCTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | AGCTTTGGCCAACACTGTGGAGAGAGCCACAGTGAACAAAATTCCAAATGCTGTTCCTGTTATTGGCCTTaGCGATGGGTGTGTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: SFGQHCGESHSEQNSKCCSCYWP*RWVCLC Trigger: ACAGAGACACACCCATCGTCAAGGCCAATAACAGGA...ACAGCATTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTGTTGGCCAAAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGAACACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGTCCTGTTATTGGCCTTaGCGATGGGTGTGTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: GEHFHNYHDFPLTAMVDRSCYWP*RWVCLC Trigger: ACAGAGACACACCCATCGTCAAGGCCAATAACAGGA...CCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | TGGTGTAGCTACCAAGTGCTAAGGAGCAGAGGTATCCCAGTACAGTGTGGAAGGATGGGTGTGTCTCTGTaGTTCACAAAGACTACAAGA | + |
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Preference number: 2 (lower is better) Translates to: WCSYQVLRSRGIPVQCGRMGVSL*FTKTTR Trigger: TCTTGTAGTCTTTGTGAAGCACAGAGACACACCCAT...CCTTCCACACTGTACTGGGATACCTCTGCTCCTTAGCACTTGGTAGCTACACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | CTGGAAGCTAAAATGGAGAACACTTCCATAACTACCATGACTTTCCCCTTACTGAGCAGCAGACAGCCTTaGCTTCCTGGACAGCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: LEAKMENTSITTMTFPLLSSRQP*LPGQLS Trigger: GGAAAGCTGTCCAGGAAGGCAAGGCTGTCTGCTGCT...CAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTCTCCATTTTAGCTTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | ACAATCAAAGCAGCAGACAGCCTTGCCTTCCTGGACAGCTTTCCTGAATCCAGGAGAAATGTTCCAATGTaGGCAGATGCTGACCATGAT | + |
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Preference number: 2 (lower is better) Translates to: TIKAADSLAFLDSFPESRRNVPM*ADADHD Trigger: ATCATGGTCAGCATCTGCCCACATTGGAACATTTCT...CCTGGATTCAGGAAAGCTGTCCAGGAAGGCAAGGCTGTCTGCTGCTTTGATTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGACAAGAAGGCCATGGTGTAGCTACCAAGTGCTAAGGAGCAGAGGTATCCCATTTCTTCACCTTTaGCATATGGTTGGGTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: SWTRRPWCSYQVLRSRGIPFLHL*HMVGSV Trigger: TACAGACCCAACCATATGCCAAAGGTGAAGAAATGG...GATACCTCTGCTCCTTAGCACTTGGTAGCTACACCATGGCCTTCTTGTCCAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGACAAGAAGGCCATGGTGTAGCTACCAAGTGCTAAGGAGCAGAGGTATCGGACACTTCATGCACTaGTACATATCTTCCTGTAAT | + |
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Preference number: 2 (lower is better) Translates to: SWTRRPWCSYQVLRSRGIGHFMH*YISSCN Trigger: ATTACAGGAAGATATGTATCAGTGCATGAAGTGTCC...GATACCTCTGCTCCTTAGCACTTGGTAGCTACACCATGGCCTTCTTGTCCAGGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233177.2 |
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| 3UTR-3UTR TCA 90 bp | AAATTAAGAATGTCGTACTGTGCATCTAAGTTTCCTCCCCCATGCGTTGCTGTGGGTATCAACATCCCATaGAGAGCTCAAGACCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: KLRMSYCASKFPPPCVAVGINIP*RAQDPD Trigger: GTCTGGGTCTTGAGCTCTTCATGGGATGTTGATACC...CACAGCAACGCATGGGGGAGGAAACTTAGATGCACAGTACGACATTCTTAATTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | AATGATGTAGCACTTGGGGGCAAAAATCAATATAAAGAGTGCTACACTGGAAGCCCTGGACAGCTTTCCTaGATCCAGGCCTACAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: NDVALGGKNQYKECYTGSPGQLS*IQAYSS Trigger: AGAGCTGTAGGCCTGGATTCAGGAAAGCTGTCCAGG...GCTTCCAGTGTAGCACTCTTTATATTGATTTTTGCCCCCAAGTGCTACATCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGCTCTTGATACCATTAACCATCTCACCATTCTAGCTGGAACTGTGGCCTTGATGGGTGTGTCTCTGTaGTTCACAAAGACTACAAGA | + |
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Preference number: 2 (lower is better) Translates to: GALDTINHLTILAGTVALMGVSL*FTKTTR Trigger: TCTTGTAGTCTTTGTGAAGCACAGAGACACACCCAT...CAAGGCCACAGTTCCAGCTAGAATGGTGAGATGGTTAATGGTATCAAGAGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGACAAGAAGGCCATGGTGTAGCTACCAAGTGCTAAGGAGCAGAGGTATCGAACAAAATTCCAAATaGTGTCTGCTGCAAGATGCA | + |
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Preference number: 2 (lower is better) Translates to: SWTRRPWCSYQVLRSRGIEQNSK*CLLQDA Trigger: TGCATCTTGCAGCAGACAGCATTTGGAATTTTGTTC...GATACCTCTGCTCCTTAGCACTTGGTAGCTACACCATGGCCTTCTTGTCCAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAAATTCCTGGACAAGAAGGCCATGGTGTAGCTACCAAGTGCTAAGGAGCTGCATAGTGACTTTCTaGACACTTCATGCACTGATA | + |
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Preference number: 2 (lower is better) Translates to: QANSWTRRPWCSYQVLRSCIVTF*TLHALI Trigger: TATCAGTGCATGAAGTGTCCAGAAAGTCACTATGCA...GCTCCTTAGCACTTGGTAGCTACACCATGGCCTTCTTGTCCAGGAATTTGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGCCAACACTGTGGAGAGAGCCACAGTGAACAAAATTCCAAATGCTGTCTGCAAGCTCACAGATTTTTaGAGGCAGTGGCTCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: LANTVERATVNKIPNAVCKLTDF*RQWLFS Trigger: AGAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTT...GCAGACAGCATTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTGTTGGCCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGAACACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGTCTCACCATTCTAGCTaGAACTGTGGCCTTGAATGC | + |
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Preference number: 2 (lower is better) Translates to: GEHFHNYHDFPLTAMVDRSHHSS*NCGLEC Trigger: GCATTCAAGGCCACAGTTCCAGCTAGAATGGTGAGA...CCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | TTGGCCAACACTGTGGAGAGAGCCACAGTGAACAAAATTCCAAATGCTGTCTGCTTGATCAATGAAGGGTaGAGAGGTAACCAGCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: LANTVERATVNKIPNAVCLINEG*RGNQPD Trigger: ATCTGGCTGGTTACCTCTCCACCCTTCATTGATCAA...GCAGACAGCATTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTGTTGGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | ACAATCAAAGCAGCAGACAGCCTTGCCTTCCTGGACAGCTTTCCTGAATCCAGGGAAGGACAAAATGACTaGACATTGTTACACATCTTC | + |
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Preference number: 2 (lower is better) Translates to: TIKAADSLAFLDSFPESREGQND*TLLHIF Trigger: GAAGATGTGTAACAATGTTCAGTCATTTTGTCCTTC...CCTGGATTCAGGAAAGCTGTCCAGGAAGGCAAGGCTGTCTGCTGCTTTGATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | GTTGTTGTGTTGGGCTGTCCAATGAAGAGGAAGGAACTGAGTAAACAGATGAATTCCTGTTATTGGCCTTaGCGATGGGTGTGTCTCTGT | + |
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Preference number: 2 (lower is better) Translates to: VVVLGCPMKRKELSKQMNSCYWP*RWVCLC Trigger: ACAGAGACACACCCATCGTCAAGGCCAATAACAGGA...ATTCATCTGTTTACTCAGTTCCTTCCTCTTCATTGGACAGCCCAACACAACAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | GGAGAACACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGAGAATACCTGCATGCTaGATGACAGGAACTTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: GEHFHNYHDFPLTAMVDRRIPAC*MTGTWL Trigger: AAGCCAAGTTCCTGTCATTCAGCATGCAGGTATTCT...CCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | CACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGGAGGAATGTGAGTACAACAGGTaGCTTTCTCTTCTGTCCACA | + |
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Preference number: 2 (lower is better) Translates to: HFHNYHDFPLTAMVDREECEYNR*LSLLST Trigger: TGTGGACAGAAGAGAAAGTCACCTGTTGTACTCACA...TTCCTCCCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | TCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACCCTGGACAGCTTTCCTaGATCCAGGCCTACAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SLTSFSQALSFYTNASSNPGQLS*IQAYSS Trigger: AGAGCTGTAGGCCTGGATTCAGGAAAGCTGTCCAGG...GTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTGGACAAGAAGGCCATGGTGTAGCTACCAAGTGCTAAGGAGCAGAGGTATCAAGTTTCTACACAAATaGAAGTTCCAACTCAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: SWTRRPWCSYQVLRSRGIKFLHK*KFQLSH Trigger: GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTT...GATACCTCTGCTCCTTAGCACTTGGTAGCTACACCATGGCCTTCTTGTCCAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CCA 90 bp | GAATGTGTCAGGCAAATTCCTGGACAAGAAGGCCATGGTGTAGCTACCAAGTGCTGCATAGTGACTTTCTaGACACTTCATGCACTGATA | + |
|
Preference number: 2 (lower is better) Translates to: ECVRQIPGQEGHGVATKCCIVTF*TLHALI Trigger: TATCAGTGCATGAAGTGTCCAGAAAGTCACTATGCA...GCACTTGGTAGCTACACCATGGCCTTCTTGTCCAGGAATTTGCCTGACACATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGGCTCTTGATACCATTAACCATCTCACCATTCTAGCTGGAACTGTGGCCTTGTGCATAGTGACTTTCTaGACACTTCATGCACTGATA | + |
|
Preference number: 2 (lower is better) Translates to: GALDTINHLTILAGTVALCIVTF*TLHALI Trigger: TATCAGTGCATGAAGTGTCCAGAAAGTCACTATGCA...CAAGGCCACAGTTCCAGCTAGAATGGTGAGATGGTTAATGGTATCAAGAGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CCA 90 bp | CATCATAGGCCAAAAAGCTCACAGATTTTTGGAGGCAGTGGCTCTTCTCTGAGTGATTTTTGGAGGCAGTaGCTCTTCTCTGAGTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: HHRPKSSQIFGGSGSSLSDFWRQ*LFSEFA Trigger: TGCAAACTCAGAGAAGAGCCACTGCCTCCAAAAATC...ACTCAGAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTTTTTGGCCTATGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTTCCTCCCCCATGCGTTGCTGTGTGTCTTCCTATATGACTTCTCATTATCGTTTGATCAATGAAGGGTaGAGAGGTAACCAGCCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: VSSPMRCCVSSYMTSHYRLINEG*RGNQPD Trigger: ATCTGGCTGGTTACCTCTCCACCCTTCATTGATCAA...ACGATAATGAGAAGTCATATAGGAAGACACACAGCAACGCATGGGGGAGGAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGAAGGCAACTGTTGAACCCATGTTGCATACAATGATGATGTGGCCATGTTCATGTCAGGCAAATTCCTaGACAAGAAGGCCATGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: WKATVEPMLHTMMMWPCSCQANS*TRRPWC Trigger: ACACCATGGCCTTCTTGTCCAGGAATTTGCCTGACA...TGAACATGGCCACATCATCATTGTATGCAACATGGGTTCAACAGTTGCCTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CCA 90 bp | GGCCTTGAATGCAATAACTACTGTAATAGCTTTGGCCAACACTGTGGAGAGAGCAGCCTTCTTCATTCATaGCTGGGTCAAAATGGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: GLECNNYCNSFGQHCGESSLLHS*LGQNGV Trigger: GACACCATTTTGACCCAGCCATGAATGAAGAAGGCT...GCTCTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR CAA 90 bp | CATGTTGCATACAATGATGATGTGGCCATGTTCAGTCTGAGTATCTaGATCAATGAAGGGTGGAGAGGTAACCAGCCAGATTCCACAGAT | + |
|
Preference number: 2 (lower is better) Translates to: HVAYNDDVAMFSLSI*INEGWRGNQPDSTD Trigger: ATCTGTGGAATCTGGCTGGTTACCTCTCCACCCTTCATTGATCAAGATACTCAGACTGAACATGGCCACATCATCATTGTATGCAACATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCTTTGGCCAACACTGTGGAGAGAGCCACAGTGAACAAAATTCCAAATGCTGTGTTGTTGGTACTGAGTaGGAGTTCAATGATCATGAC | + |
|
Preference number: 2 (lower is better) Translates to: SFGQHCGESHSEQNSKCCVVGTE*EFNDHD Trigger: GTCATGATCATTGAACTCTCACTCAGTACCAACAAC...ACAGCATTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTGTTGGCCAAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233177.2 |
||
| 3UTR-3UTR TCA 90 bp | CACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGGAGGAACCACAGTGTTTTCAGTaGTGTCTATCAACACCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: HFHNYHDFPLTAMVDREEPQCFQ*CLSTPK Trigger: CTTAGGTGTTGATAGACATCACTGAAAACACTGTGG...TTCCTCCCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAATCAAAGCAGCAGACAGCCTTGCCTTCCTGGACAGCTTTCCTGAATCCAGGATAAGACATTTAGAATaGTGTGACACTGGTGTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: TIKAADSLAFLDSFPESRIRHLE*CDTGVN Trigger: GTTTACACCAGTGTCACAGCATTCTAAATGTCTTAT...CCTGGATTCAGGAAAGCTGTCCAGGAAGGCAAGGCTGTCTGCTGCTTTGATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCTGGACAAGAAGGCCATGGTGTAGCTACCAAGTGCTAAGGAGCAGAGGTATCATAAGACATTTAGAATaGTGTGACACTGGTGTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SWTRRPWCSYQVLRSRGIIRHLE*CDTGVN Trigger: GTTTACACCAGTGTCACAGCATTCTAAATGTCTTAT...GATACCTCTGCTCCTTAGCACTTGGTAGCTACACCATGGCCTTCTTGTCCAGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | GAATGTGTCAGGCAAATTCCTGGACAAGAAGGCCATGGTGTAGCTACCAAGTGCAAGTTTCTACACAAATaGAAGTTCCAACTCAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: ECVRQIPGQEGHGVATKCKFLHK*KFQLSH Trigger: GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTT...GCACTTGGTAGCTACACCATGGCCTTCTTGTCCAGGAATTTGCCTGACACATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | GAACACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGGAGATGGGTGTGTCTCTGTaGTTCACAAAGACTACAAGA | + |
|
Preference number: 2 (lower is better) Translates to: EHFHNYHDFPLTAMVDREMGVSL*FTKTTR Trigger: TCTTGTAGTCTTTGTGAAGCACAGAGACACACCCAT...CTCCCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | GAATGTGTCAGGCAAATTCCTGGACAAGAAGGCCATGGTGTAGCTACCAAGTGCAACTGTGGCCTTGAATaGAATAACTACTGTAATAGC | + |
|
Preference number: 2 (lower is better) Translates to: ECVRQIPGQEGHGVATKCNCGLE*NNYCNS Trigger: GCTATTACAGTAGTTATTGCATTCAAGGCCACAGTT...GCACTTGGTAGCTACACCATGGCCTTCTTGTCCAGGAATTTGCCTGACACATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | CACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGGAGGAAACACAGAAGAATACCTaGATGCTGAATGACAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: HFHNYHDFPLTAMVDREETQKNT*MLNDRN Trigger: GTTCCTGTCATTCAGCATGCAGGTATTCTTCTGTGT...TTCCTCCCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTTCCTCCCCCATGCGTTGCTGTGTGTCTTCCTATATGACTTCTCATTATCGTACACAGAAGAATACCTaGATGCTGAATGACAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: VSSPMRCCVSSYMTSHYRTQKNT*MLNDRN Trigger: GTTCCTGTCATTCAGCATGCAGGTATTCTTCTGTGT...ACGATAATGAGAAGTCATATAGGAAGACACACAGCAACGCATGGGGGAGGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | GAACACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGGAGACACAGAAGAATACCTaGATGCTGAATGACAGGAAC | + |
|
Preference number: 2 (lower is better) Translates to: EHFHNYHDFPLTAMVDRETQKNT*MLNDRN Trigger: GTTCCTGTCATTCAGCATGCAGGTATTCTTCTGTGT...CTCCCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | AATGATGTAGCACTTGGGGGCAAAAATCAATATAAAGAGTGCTACACTGGAAGCAAGTTTCCTCCCCCATaGGTTGCTGTGTGTCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: NDVALGGKNQYKECYTGSKFPPP*VAVCLP Trigger: AGGAAGACACACAGCAACGCATGGGGGAGGAAACTT...GCTTCCAGTGTAGCACTCTTTATATTGATTTTTGCCCCCAAGTGCTACATCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCCTTGAATGCAATAACTACTGTAATAGCTTTGGCCAACACTGTGGAGAGAAGCTCACAGATTTTTaGAGGCAGTGGCTCTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: CGLECNNYCNSFGQHCGEKLTDF*RQWLFS Trigger: AGAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTT...CTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | GAACACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGGAGAGAAATGTTCCAATGTaGGCAGATGCTGACCATGAT | + |
|
Preference number: 2 (lower is better) Translates to: EHFHNYHDFPLTAMVDRERNVPM*ADADHD Trigger: ATCATGGTCAGCATCTGCCCACATTGGAACATTTCT...CTCCCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCTTGAATGCAATAACTACTGTAATAGCTTTGGCCAACACTGTGGAGAGAGCAGAAATGTTCCAATGTaGGCAGATGCTGACCATGAT | + |
|
Preference number: 2 (lower is better) Translates to: GLECNNYCNSFGQHCGESRNVPM*ADADHD Trigger: ATCATGGTCAGCATCTGCCCACATTGGAACATTTCT...GCTCTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | CACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGGAGGAAATGGCTGGGTCAAAATaGTGTCTTGGAAGTAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: HFHNYHDFPLTAMVDREEMAGSK*CLGSKS Trigger: GGATTTACTTCCAAGACACCATTTTGACCCAGCCAT...TTCCTCCCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR CAA 90 bp | CTAGCTGGAACTGTGGCCTTGAATGCAATAACTACTGTAATAGCTTaGGCCAACACTGTGGAGAGAGCCACAGTGAACAAAATTCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: LAGTVALNAITTVIA*ANTVERATVNKIPN Trigger: ATTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCCACAGTTCCAGCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR CAA 90 bp | TCTGTGATCATCTGGTATGATCAGACCAACCCAGGACCATCTGAATaGAAGCAACAAAAAGACTATAGCAAGCGACAGAGATGTGTCCTT | + |
|
Preference number: 2 (lower is better) Translates to: SVIIWYDQTNPGPSE*KQQKDYSKRQRCVL Trigger: AAGGACACATCTCTGTCGCTTGCTATAGTCTTTTTGTTGCTTCAATTCAGATGGTCCTGGGTTGGTCTGATCATACCAGATGATCACAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR CAA 90 bp | CCAAAAAGCTCACAGATTTTTGGAGGCAGTGGCTCTTCTCTGAGTTaGCATAGTGACTTTCTGGACACTTCATGCACTGATACATATCTG | + |
|
Preference number: 2 (lower is better) Translates to: PKSSQIFGGSGSSLS*HSDFLDTSCTDTYL Trigger: CAGATATGTATCAGTGCATGAAGTGTCCAGAAAGTCACTATGCAAACTCAGAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTTTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR TCA 90 bp | TGGAAGGCAACTGTTGAACCCATGTTGCATACAATGATGATGTGGCCATGTTCACCACAGTGTTTTCAGTaGTGTCTATCAACACCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: WKATVEPMLHTMMMWPCSPQCFQ*CLSTPK Trigger: CTTAGGTGTTGATAGACATCACTGAAAACACTGTGG...TGAACATGGCCACATCATCATTGTATGCAACATGGGTTCAACAGTTGCCTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 |
||
| 3UTR-3UTR TCA 90 bp | TTGGCCAACACTGTGGAGAGAGCCACAGTGAACAAAATTCCAAATGCTGTCTGCCAGGACCATCTGAATTaGAGCAACAAAAAGACTATA | + |
|
Preference number: 2 (lower is better) Translates to: LANTVERATVNKIPNAVCQDHLN*SNKKTI Trigger: TATAGTCTTTTTGTTGCTTCAATTCAGATGGTCCTG...GCAGACAGCATTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTGTTGGCCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCTTGAATGCAATAACTACTGTAATAGCTTTGGCCAACACTGTGGAGAGAGCGTGTGTCTTCCTATATaGCTTCTCATTATCGTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: GLECNNYCNSFGQHCGESVCLPI*LLIIVF Trigger: GAACACGATAATGAGAAGTCATATAGGAAGACACAC...GCTCTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGAAGGCAACTGTTGAACCCATGTTGCATACAATGATGATGTGGCCATGTTCAATGGGTGTGTCTCTGTaGTTCACAAAGACTACAAGA | + |
|
Preference number: 2 (lower is better) Translates to: WKATVEPMLHTMMMWPCSMGVSL*FTKTTR Trigger: TCTTGTAGTCTTTGTGAAGCACAGAGACACACCCAT...TGAACATGGCCACATCATCATTGTATGCAACATGGGTTCAACAGTTGCCTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCACAAGTTTCCTCCCCCATaGGTTGCTGTGTGTCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: ILFTSSKFLHKCKFQLSHKFPPP*VAVCLP Trigger: AGGAAGACACACAGCAACGCATGGGGGAGGAAACTT...GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAGGCAACAGCACGCACAGCATTGTAAATATTGTAGCCTTCTTCATTCATGGCGATTTTTGGAGGCAGTaGCTCTTCTCTGAGTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: IGNSTHSIVNIVAFFIHGDFWRQ*LFSEFA Trigger: TGCAAACTCAGAGAAGAGCCACTGCCTCCAAAAATC...GCCATGAATGAAGAAGGCTACAATATTTACAATGCTGTGCGTGCTGTTGCCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCACCATTCTAGCTGGAACTGTGGCCTTGAATGCAATAACTACTGTAATAGCTGATTTTTGGAGGCAGTaGCTCTTCTCTGAGTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: LTILAGTVALNAITTVIADFWRQ*LFSEFA Trigger: TGCAAACTCAGAGAAGAGCCACTGCCTCCAAAAATC...AGCTATTACAGTAGTTATTGCATTCAAGGCCACAGTTCCAGCTAGAATGGTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CCA 90 bp | CATCATAGGCCAAAAAGCTCACAGATTTTTGGAGGCAGTGGCTCTTCTCTGAGTCCACAGATAATAAGTTaGATCAGTGTACAGATGGGA | + |
|
Preference number: 2 (lower is better) Translates to: HHRPKSSQIFGGSGSSLSPQIIS*ISVQMG Trigger: TCCCATCTGTACACTGATCCAACTTATTATCTGTGG...ACTCAGAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTTTTTGGCCTATGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGATGTAGCACTTGGGGGCAAAAATCAATATAAAGAGTGCTACACTGGAAGCTGTCAGGCAAATTCCTaGACAAGAAGGCCATGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: NDVALGGKNQYKECYTGSCQANS*TRRPWC Trigger: ACACCATGGCCTTCTTGTCCAGGAATTTGCCTGACA...GCTTCCAGTGTAGCACTCTTTATATTGATTTTTGCCCCCAAGTGCTACATCATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR CAA 90 bp | CCAAAAAGCTCACAGATTTTTGGAGGCAGTGGCTCTTCTCTGAGTTaGCATAGTGACTTTCTGGACACTTCATGCACTGATACATATCTT | + |
|
Preference number: 2 (lower is better) Translates to: PKSSQIFGGSGSSLS*HSDFLDTSCTDTYL Trigger: AAGATATGTATCAGTGCATGAAGTGTCCAGAAAGTCACTATGCAAACTCAGAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTTTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233177.2 |
||
| 3UTR-3UTR TCA 90 bp | AACACTGTGGAGAGAGCCACAGTGAACAAAATTCCAAATGCTGTCTGCTGCAAGGAAGGACAAAATGACTaGACATTGTTACACATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: NTVERATVNKIPNAVCCKEGQND*TLLHIF Trigger: GAAGATGTGTAACAATGTTCAGTCATTTTGTCCTTC...CTTGCAGCAGACAGCATTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR TCA 90 bp | CATCATAGGCCAAAAAGCTCACAGATTTTTGGAGGCAGTGGCTCTTCTCTGAGTCAGGACCATCTGAATTaGAGCAACAAAAAGACTATA | + |
|
Preference number: 2 (lower is better) Translates to: HHRPKSSQIFGGSGSSLSQDHLN*SNKKTI Trigger: TATAGTCTTTTTGTTGCTTCAATTCAGATGGTCCTG...ACTCAGAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTTTTTGGCCTATGATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR TCA 90 bp | ACTTTCTGGACACTTCATGCACTGATACATATCTGTCTCATTGGAAATCTCATTGGTATCAACATCCCATaGAGAGCTCAAGACCCAGAC | + |
|
Preference number: 2 (lower is better) Translates to: TFWTLHALIHICLIGNLIGINIP*RAQDPD Trigger: GTCTGGGTCTTGAGCTCTTCATGGGATGTTGATACC...AATGAGATTTCCAATGAGACAGATATGTATCAGTGCATGAAGTGTCCAGAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTGGCCTTGAATGCAATAACTACTGTAATAGCTTTGGCCAACACTGTGGAGAGGTGTGTCTTCCTATATaGCTTCTCATTATCGTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: CGLECNNYCNSFGQHCGEVCLPI*LLIIVF Trigger: GAACACGATAATGAGAAGTCATATAGGAAGACACAC...CTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTTTGGCCAACACTGTGGAGAGAGCCACAGTGAACAAAATTCCAAATGCTGTATACCCATCAGGTTATaGCACACTAATATAATCACG | + |
|
Preference number: 2 (lower is better) Translates to: SFGQHCGESHSEQNSKCCIPIRL*HTNIIT Trigger: CGTGATTATATTAGTGTGGCATAACCTGATGGGTAT...ACAGCATTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTGTTGGCCAAAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | CACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTTGCTGTGATGATGAGTaGCATTCCCAAAGGCTCATC | + |
|
Preference number: 2 (lower is better) Translates to: HILFTSSKFLHKCKFQLSCCDDE*HSQRLI Trigger: GATGAGCCTTTGGGAATGGCACTCATCATCACAGCA...ACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTGGCCTTGAATGCAATAACTACTGTAATAGCTTTGGCCAACACTGTGGAGAGGAACAAAATTCCAAATaGTGTCTGCTGCAAGATGCA | + |
|
Preference number: 2 (lower is better) Translates to: CGLECNNYCNSFGQHCGEEQNSK*CLLQDA Trigger: TGCATCTTGCAGCAGACAGCATTTGGAATTTTGTTC...CTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | GAACACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGGAGTTGGTAATTGGTAATTaGTTGTTGGTACTGAGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: EHFHNYHDFPLTAMVDRELVIGN*LLVLSE Trigger: CTCACTCAGTACCAACAACCAATTACCAATTACCAA...CTCCCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233177.2 |
||
| 3UTR-3UTR TCA 90 bp | CTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCATTACTGCACACAGACTaGGGAGTCATTGTAAACCCT | + |
|
Preference number: 2 (lower is better) Translates to: LTSFSQALSFYTNASSNSLLHTD*GVIVNP Trigger: AGGGTTTACAATGACTCCTCAGTCTGTGTGCAGTAA...TGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAAGGCAACTGTTGAACCCATGTTGCATACAATGATGATGTGGCCATGTTCAATACCCATCAGGTTATaGCACACTAATATAATCACG | + |
|
Preference number: 2 (lower is better) Translates to: WKATVEPMLHTMMMWPCSIPIRL*HTNIIT Trigger: CGTGATTATATTAGTGTGGCATAACCTGATGGGTAT...TGAACATGGCCACATCATCATTGTATGCAACATGGGTTCAACAGTTGCCTTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGGCCTTGAATGCAATAACTACTGTAATAGCTTTGGCCAACACTGTGGAGAGATACCCATCAGGTTATaGCACACTAATATAATCACG | + |
|
Preference number: 2 (lower is better) Translates to: CGLECNNYCNSFGQHCGEIPIRL*HTNIIT Trigger: CGTGATTATATTAGTGTGGCATAACCTGATGGGTAT...CTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCCACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGAAGGCAACTGTTGAACCCATGTTGCATACAATGATGATGTGGCCATGTTCATTTCTGGACACTTCATaGACTGATACATATCTTCCT | + |
|
Preference number: 2 (lower is better) Translates to: WKATVEPMLHTMMMWPCSFLDTS*TDTYLP Trigger: AGGAAGATATGTATCAGTGCATGAAGTGTCCAGAAA...TGAACATGGCCACATCATCATTGTATGCAACATGGGTTCAACAGTTGCCTTCCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233177.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCACCATTCTAGCTGGAACTGTGGCCTTGAATGCAATAACTACTGTAATAGCTTGCATAGTGACTTTCTaGACACTTCATGCACTGATA | + |
|
Preference number: 2 (lower is better) Translates to: LTILAGTVALNAITTVIACIVTF*TLHALI Trigger: TATCAGTGCATGAAGTGTCCAGAAAGTCACTATGCA...AGCTATTACAGTAGTTATTGCATTCAAGGCCACAGTTCCAGCTAGAATGGTGAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | TCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCGATTTTTGGAGGCAGTaGCTCTTCTCTGAGTTTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SVTHILFTSSKFLHKCKFDFWRQ*LFSEFA Trigger: TGCAAACTCAGAGAAGAGCCACTGCCTCCAAAAATC...GAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAAGCTCACAGATTTTTaGAGGCAGTGGCTCTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: THILFTSSKFLHKCKFQLKLTDF*RQWLFS Trigger: AGAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTT...GAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTCTGGACACTTCATGCACTGATACATATCTGTCTCATTGGAAATCTCATTTCTCACCATTCTAGCTaGAACTGTGGCCTTGAATGC | + |
|
Preference number: 2 (lower is better) Translates to: TFWTLHALIHICLIGNLISHHSS*NCGLEC Trigger: GCATTCAAGGCCACAGTTCCAGCTAGAATGGTGAGA...AATGAGATTTCCAATGAGACAGATATGTATCAGTGCATGAAGTGTCCAGAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTCTGGACACTTCATGCACTGATACATATCTGTCTCATTGGAAATCTCATTTGTCAGGCAAATTCCTaGACAAGAAGGCCATGGTGT | + |
|
Preference number: 2 (lower is better) Translates to: TFWTLHALIHICLIGNLICQANS*TRRPWC Trigger: ACACCATGGCCTTCTTGTCCAGGAATTTGCCTGACA...AATGAGATTTCCAATGAGACAGATATGTATCAGTGCATGAAGTGTCCAGAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGAAGCTAAAATGGAGAACACTTCCATAACTACCATGACTTTCCCCTTACTGACATATCTGTCTCATTaGAAATCTCATTGTCGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: LEAKMENTSITTMTFPLLTYLSH*KSHCRH Trigger: GTGCCGACAATGAGATTTCCAATGAGACAGATATGT...CAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTCTCCATTTTAGCTTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR CAA 90 bp | AAATATTGTAGCCTTCTTCATTCATGGCTGGGTCAAAATGGTGTCTaGGAAGTAAATCCAAAGAAGCATTGGGTTGGCAGTTCTCCAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KYCSLLHSWLGQNGV*EVNPKKHWVGSSPK Trigger: TTTTGGAGAACTGCCAACCCAATGCTTCTTTGGATTTACTTCCAAGACACCATTTTGACCCAGCCATGAATGAAGAAGGCTACAATATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCATGATCCAGGAAGGACAAAATGACTaGACATTGTTACACATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: FSQTQAKNTSTRSSIMIQEGQND*TLLHIF Trigger: GAAGATGTGTAACAATGTTCAGTCATTTTGTCCTTC...CTGGATCATGATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCACCAAAAGGGCCAAAGGTaGCCTGAGGTATTTTATAGA | + |
|
Preference number: 2 (lower is better) Translates to: ILFTSSKFLHKCKFQLSHQKGQR*PEVFYR Trigger: TCTATAAAATACCTCAGGTCACCTTTGGCCCTTTTG...GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAAAAGGGCCAAAGGTaGCCTGAGGTATTTTATAGA | + |
|
Preference number: 2 (lower is better) Translates to: SVTHILFTSSKFLHKCKFQKGQR*PEVFYR Trigger: TCTATAAAATACCTCAGGTCACCTTTGGCCCTTTTG...GAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | CACTTAGAGAATAGGTTCCTACTTTCACCTTTAATCCAAGACCACTTGGAAAATTTCTTTAGGAAAGGGTaGAGCTGCCACTGGAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: HLENRFLLSPLIQDHLENFFRKG*SCHWKN Trigger: ATTCTTCCAGTGGCAGCTTCACCCTTTCCTAAAGAA...ATTTTCCAAGTGGTCTTGGATTAAAGGTGAAAGTAGGAACCTATTCTCTAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTCTGGACACTTCATGCACTGATACATATCTGTCTCATTGGAAATCTCATTAAGCTCACAGATTTTTaGAGGCAGTGGCTCTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: TFWTLHALIHICLIGNLIKLTDF*RQWLFS Trigger: AGAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTT...AATGAGATTTCCAATGAGACAGATATGTATCAGTGCATGAAGTGTCCAGAAAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCATGAAGCTCACAGATTTTTaGAGGCAGTGGCTCTTCTCT | + |
|
Preference number: 2 (lower is better) Translates to: IKFSQTQAKNTSTRSSIMKLTDF*RQWLFS Trigger: AGAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTT...CATGATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | TCAATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCTTGATCAATGAAGGGTaGAGAGGTAACCAGCCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: SIKFSQTQAKNTSTRSSILINEG*RGNQPD Trigger: ATCTGGCTGGTTACCTCTCCACCCTTCATTGATCAA...GATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTCTGGACACTTCATGCACTGATACATATCTGTCTCATTGGAAATCTCATTTTGATCAATGAAGGGTaGAGAGGTAACCAGCCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: TFWTLHALIHICLIGNLILINEG*RGNQPD Trigger: ATCTGGCTGGTTACCTCTCCACCCTTCATTGATCAA...AATGAGATTTCCAATGAGACAGATATGTATCAGTGCATGAAGTGTCCAGAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | AAATTAAGAATGTCGTACTGTGCATCTAAGTTTCCTCCCCCATGCGTTGCTGTGTTTTCCATAGTTCATTaGAAAATGCATTCCATGCAC | + |
|
Preference number: 2 (lower is better) Translates to: KLRMSYCASKFPPPCVAVFSIVH*KMHSMH Trigger: GTGCATGGAATGCATTTTCCAATGAACTATGGAAAA...CACAGCAACGCATGGGGGAGGAAACTTAGATGCACAGTACGACATTCTTAATTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | CTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCATTCTTCATTCATGGCTaGGTCAAAATGGTGTCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: LTSFSQALSFYTNASSNSFFIHG*VKMVSW Trigger: CCAAGACACCATTTTGACCCAGCCATGAATGAAGAA...TGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | ATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCACCCATTTCTTCACCTTTaGCATATGGTTGGGTCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: ILFTSSKFLHKCKFQLSHPFLHL*HMVGSV Trigger: TACAGACCCAACCATATGCCAAAGGTGAAGAAATGG...GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | AATGATGTAGCACTTGGGGGCAAAAATCAATATAAAGAGTGCTACACTGGAAGCGAAGGACAAAATGACTaGACATTGTTACACATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: NDVALGGKNQYKECYTGSEGQND*TLLHIF Trigger: GAAGATGTGTAACAATGTTCAGTCATTTTGTCCTTC...GCTTCCAGTGTAGCACTCTTTATATTGATTTTTGCCCCCAAGTGCTACATCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | CACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTGAAGCTACAGTACTCTaGTACCTAAACCACATAAAG | + |
|
Preference number: 2 (lower is better) Translates to: HILFTSSKFLHKCKFQLSEATVL*YLNHIK Trigger: CTTTATGTGGTTTAGGTATCAGAGTACTGTAGCTTC...ACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | CACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTAGAGTGGTACACACTTaGAGTGCTGTTTGTTTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: HILFTSSKFLHKCKFQLSRVVHT*SAVCFC Trigger: ACAAAAACAAACAGCACTTCAAGTGTGTACCACTCT...ACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 |
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| 3UTR-3UTR GCA 90 bp | AATGATGTAGCACTTGGGGGCAAAAATCAATATAAAGAGTGCTACACTGGAAGCAAGTTTCTACACAAATaGAAGTTCCAACTCAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: NDVALGGKNQYKECYTGSKFLHK*KFQLSH Trigger: GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTT...GCTTCCAGTGTAGCACTCTTTATATTGATTTTTGCCCCCAAGTGCTACATCATT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | TCAATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCATGGGTGTGTCTCTGTaGTTCACAAAGACTACAAGA | + |
|
Preference number: 2 (lower is better) Translates to: SIKFSQTQAKNTSTRSSIMGVSL*FTKTTR Trigger: TCTTGTAGTCTTTGTGAAGCACAGAGACACACCCAT...GATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTATTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | TCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACGAACAAAATTCCAAATaGTGTCTGCTGCAAGATGCA | + |
|
Preference number: 2 (lower is better) Translates to: SLTSFSQALSFYTNASSNEQNSK*CLLQDA Trigger: TGCATCTTGCAGCAGACAGCATTTGGAATTTTGTTC...GTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | GCCCATGAAACATCTGATCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCGCTATGCAGATACCATaGTTTTCCATATTTTCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: AHETSDQSLTSFSQALSFAMQIP*FSIFSL Trigger: AAGAGAAAATATGGAAAACCATGGTATCTGCATAGC...GAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGATCAGATGTTTCATGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAGGACCATCTGAATTaGAGCAACAAAAAGACTATA | + |
|
Preference number: 2 (lower is better) Translates to: SVTHILFTSSKFLHKCKFQDHLN*SNKKTI Trigger: TATAGTCTTTTTGTTGCTTCAATTCAGATGGTCCTG...GAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | TCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCATACCCATCAGGTTATaGCACACTAATATAATCACG | + |
|
Preference number: 2 (lower is better) Translates to: SVTHILFTSSKFLHKCKFIPIRL*HTNIIT Trigger: CGTGATTATATTAGTGTGGCATAACCTGATGGGTAT...GAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCACATACCCATCAGGTTATaGCACACTAATATAATCACG | + |
|
Preference number: 2 (lower is better) Translates to: ILFTSSKFLHKCKFQLSHIPIRL*HTNIIT Trigger: CGTGATTATATTAGTGTGGCATAACCTGATGGGTAT...GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCACAAGTTTCTACACAAATaGAAGTTCCAACTCAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: ILFTSSKFLHKCKFQLSHKFLHK*KFQLSH Trigger: GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTT...GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | ATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCATGGAACAAAATTCCAAATaGTGTCTGCTGCAAGATGCA | + |
|
Preference number: 2 (lower is better) Translates to: IKFSQTQAKNTSTRSSIMEQNSK*CLLQDA Trigger: TGCATCTTGCAGCAGACAGCATTTGGAATTTTGTTC...CATGATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTTCTGGACACTTCATGCACTGATACATATCTGTCTCATTGGAAATCTCATTGAACAAAATTCCAAATaGTGTCTGCTGCAAGATGCA | + |
|
Preference number: 2 (lower is better) Translates to: TFWTLHALIHICLIGNLIEQNSK*CLLQDA Trigger: TGCATCTTGCAGCAGACAGCATTTGGAATTTTGTTC...AATGAGATTTCCAATGAGACAGATATGTATCAGTGCATGAAGTGTCCAGAAAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | TCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACAACTGTGGCCTTGAATaGAATAACTACTGTAATAGC | + |
|
Preference number: 2 (lower is better) Translates to: SLTSFSQALSFYTNASSNNCGLE*NNYCNS Trigger: GCTATTACAGTAGTTATTGCATTCAAGGCCACAGTT...GTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | CACTTAGAGAATAGGTTCCTACTTTCACCTTTAATCCAAGACCACTTGGAAAATCCACAGATAATAAGTTaGATCAGTGTACAGATGGGA | + |
|
Preference number: 2 (lower is better) Translates to: HLENRFLLSPLIQDHLENPQIIS*ISVQMG Trigger: TCCCATCTGTACACTGATCCAACTTATTATCTGTGG...ATTTTCCAAGTGGTCTTGGATTAAAGGTGAAAGTAGGAACCTATTCTCTAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | ATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCACATAAGACATTTAGAATaGTGTGACACTGGTGTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: ILFTSSKFLHKCKFQLSHIRHLE*CDTGVN Trigger: GTTTACACCAGTGTCACAGCATTCTAAATGTCTTAT...GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | TCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACATAAGACATTTAGAATaGTGTGACACTGGTGTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: SLTSFSQALSFYTNASSNIRHLE*CDTGVN Trigger: GTTTACACCAGTGTCACAGCATTCTAAATGTCTTAT...GTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR GCA 90 bp | CACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTATAAGACATTTAGAATaGTGTGACACTGGTGTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: HILFTSSKFLHKCKFQLSIRHLE*CDTGVN Trigger: GTTTACACCAGTGTCACAGCATTCTAAATGTCTTAT...ACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | TCAATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCATACCCATCAGGTTATaGCACACTAATATAATCACG | + |
|
Preference number: 2 (lower is better) Translates to: SIKFSQTQAKNTSTRSSIIPIRL*HTNIIT Trigger: CGTGATTATATTAGTGTGGCATAACCTGATGGGTAT...GATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | ATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCATGAAGTTTCTACACAAATaGAAGTTCCAACTCAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: IKFSQTQAKNTSTRSSIMKFLHK*KFQLSH Trigger: GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTT...CATGATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | ACTTTCTGGACACTTCATGCACTGATACATATCTGTCTCATTGGAAATCTCATTAAGTTTCTACACAAATaGAAGTTCCAACTCAGTCAC | + |
|
Preference number: 2 (lower is better) Translates to: TFWTLHALIHICLIGNLIKFLHK*KFQLSH Trigger: GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTT...AATGAGATTTCCAATGAGACAGATATGTATCAGTGCATGAAGTGTCCAGAAAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCGGTACACACTTGAAGTaGTGTTTGTTTTTGTGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: SVTHILFTSSKFLHKCKFGTHLK*CLFLCF Trigger: AAAACACAAAAACAAACAGCACTTCAAGTGTGTACC...GAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233147.2 |
||
| 3UTR-3UTR CCA 90 bp | ATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCACTTTTCCATAGTTCATTaGAAAATGCATTCCATGCAC | + |
|
Preference number: 2 (lower is better) Translates to: ILFTSSKFLHKCKFQLSHFSIVH*KMHSMH Trigger: GTGCATGGAATGCATTTTCCAATGAACTATGGAAAA...GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CCA 90 bp | ACTTTCTGGACACTTCATGCACTGATACATATCTGTCTCATTGGAAATCTCATTGCTATGCAGATACCATaGTTTTCCATATTTTCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: TFWTLHALIHICLIGNLIAMQIP*FSIFSL Trigger: AAGAGAAAATATGGAAAACCATGGTATCTGCATAGC...AATGAGATTTCCAATGAGACAGATATGTATCAGTGCATGAAGTGTCCAGAAAGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR TCA 72 bp | AGCAGCAGACAGCCTTGCCTTCCTGGACAGCTTTCCTaGATCCAGGCCTACAGCTCTTACTGCACACAGACT | + |
|
Preference number: 3 (lower is better) Translates to: SSRQPCLPGQLS*IQAYSSYCTQT Trigger: AGTCTGTGTGCAGTAAGAGCTGTAGGCCTGGATTCAGGAAAGCTGTCCAGGAAGGCAAGGCTGTCTGCTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CAA 90 bp | TGGTGTAGCTACCAAGTGCTAAGGAGCAGAGGTATCCCAGTACAGTGTGGAAGGAAAGCTCACAGATTTTaGGAGGCAGTGGCTCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: WCSYQVLRSRGIPVQCGRKAHRF*EAVALL Trigger: GAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTTT...CCTTCCACACTGTACTGGGATACCTCTGCTCCTTAGCACTTGGTAGCTACACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAATCAAAGCAGCAGACAGCCTTGCCTTCCTGGACAGCTTTCCTGAATCCAGGAAAGCTCACAGATTTTaGGAGGCAGTGGCTCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TIKAADSLAFLDSFPESRKAHRF*EAVALL Trigger: GAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTTT...CCTGGATTCAGGAAAGCTGTCCAGGAAGGCAAGGCTGTCTGCTGCTTTGATTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CAA 90 bp | GAACACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGGAGAAGCAGCAGACAGCCTaGCCTTCCTGGACAGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: EHFHNYHDFPLTAMVDREKQQTA*PSWTAF Trigger: GAAAGCTGTCCAGGAAGGCAAGGCTGTCTGCTGCTT...CTCCCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR CCA 72 bp | GGAATACAATCAAAGCAGCAGACAGCCTTGCCTTCCTaGACAGCTTTCCTGAATCCAGGCCTACAGCTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: GIQSKQQTALPS*TAFLNPGLQLL Trigger: TAAGAGCTGTAGGCCTGGATTCAGGAAAGCTGTCCAGGAAGGCAAGGCTGTCTGCTGCTTTGATTGTATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CAA 90 bp | GGGGCTCTTGATACCATTAACCATCTCACCATTCTAGCTGGAACTGTGGCCTTGAAAGCTCACAGATTTTaGGAGGCAGTGGCTCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GALDTINHLTILAGTVALKAHRF*EAVALL Trigger: GAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTTT...CAAGGCCACAGTTCCAGCTAGAATGGTGAGATGGTTAATGGTATCAAGAGCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR GCA 72 bp | GAGAGAGCCACAGTGAACAAAATTCCAAATGCTGTCTaGTGCAAGATGCAGGTTGTTGTGTTGGGCTGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: ERATVNKIPNAV*CKMQVVVLGCP Trigger: TGGACAGCCCAACACAACAACCTGCATCTTGCAGCAGACAGCATTTGGAATTTTGTTCACTGTGGCTCTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGGCCTTGAATGCAATAACTACTGTAATAGCTTTGGCCAACACTGTGGAGAGGTCCTGTTATTGGCCTaGACGATGGGTGTGTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CGLECNNYCNSFGQHCGEVLLLA*TMGVSL Trigger: CAGAGACACACCCATCGTCAAGGCCAATAACAGGAC...CTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CAA 90 bp | GGCCTTGAATGCAATAACTACTGTAATAGCTTTGGCCAACACTGTGGAGAGAGCGGCTCTTCTCTGAGTTaGCATAGTGACTTTCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: GLECNNYCNSFGQHCGESGSSLS*HSDFLD Trigger: GTCCAGAAAGTCACTATGCAAACTCAGAGAAGAGCC...GCTCTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CAA 90 bp | CACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGGAGGAAGGCTCTTCTCTGAGTTaGCATAGTGACTTTCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: HFHNYHDFPLTAMVDREEGSSLS*HSDFLD Trigger: GTCCAGAAAGTCACTATGCAAACTCAGAGAAGAGCC...TTCCTCCCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CAA 90 bp | GTTTCCTCCCCCATGCGTTGCTGTGTGTCTTCCTATATGACTTCTCATTATCGTAAAGCTCACAGATTTTaGGAGGCAGTGGCTCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: VSSPMRCCVSSYMTSHYRKAHRF*EAVALL Trigger: GAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTTT...ACGATAATGAGAAGTCATATAGGAAGACACACAGCAACGCATGGGGGAGGAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CAA 90 bp | GTTGTTGTGTTGGGCTGTCCAATGAAGAGGAAGGAACTGAGTAAACAGATGAATGTCCTGTTATTGGCCTaGACGATGGGTGTGTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VVVLGCPMKRKELSKQMNVLLLA*TMGVSL Trigger: CAGAGACACACCCATCGTCAAGGCCAATAACAGGAC...ATTCATCTGTTTACTCAGTTCCTTCCTCTTCATTGGACAGCCCAACACAACAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCATGAAACATCTGATCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCGTCCTGTTATTGGCCTaGACGATGGGTGTGTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AHETSDQSLTSFSQALSFVLLLA*TMGVSL Trigger: CAGAGACACACCCATCGTCAAGGCCAATAACAGGAC...GAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGATCAGATGTTTCATGGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR GCA 72 bp | AGAGCCACAGTGAACAAAATTCCAAATGCTGTCTGCTaGAAGATGCAGGTTGTTGTGTTGGGCTGTCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: RATVNKIPNAVC*KMQVVVLGCPM Trigger: CATTGGACAGCCCAACACAACAACCTGCATCTTGCAGCAGACAGCATTTGGAATTTTGTTCACTGTGGCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CAA 90 bp | AGCTTTGGCCAACACTGTGGAGAGAGCCACAGTGAACAAAATTCCAAATGCTGTACTACTGTAATAGCTTaGGCCAACACTGTGGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SFGQHCGESHSEQNSKCCTTVIA*ANTVER Trigger: TCTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGT...ACAGCATTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTGTTGGCCAAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CAA 90 bp | GAACACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGGAGTGTGGAAGGCAACTGTaGAACCCATGTTGCATACAA | + |
|
Preference number: 3 (lower is better) Translates to: EHFHNYHDFPLTAMVDRECGRQL*NPCCIQ Trigger: TTGTATGCAACATGGGTTCAACAGTTGCCTTCCACA...CTCCCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CAA 90 bp | TTGGCCAACACTGTGGAGAGAGCCACAGTGAACAAAATTCCAAATGCTGTCTGCTCATTGGAAATCTCATaGTCGGCACAGGGAATACAA | + |
|
Preference number: 3 (lower is better) Translates to: LANTVERATVNKIPNAVCSLEIS*SAQGIQ Trigger: TTGTATTCCCTGTGCCGACAATGAGATTTCCAATGA...GCAGACAGCATTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTGTTGGCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CAA 90 bp | GCCCATGAAACATCTGATCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCGGCTCTTCTCTGAGTTaGCATAGTGACTTTCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: AHETSDQSLTSFSQALSFGSSLS*HSDFLD Trigger: GTCCAGAAAGTCACTATGCAAACTCAGAGAAGAGCC...GAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGATCAGATGTTTCATGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CAA 90 bp | GTTGTTGTGTTGGGCTGTCCAATGAAGAGGAAGGAACTGAGTAAACAGATGAATGGCTCTTCTCTGAGTTaGCATAGTGACTTTCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: VVVLGCPMKRKELSKQMNGSSLS*HSDFLD Trigger: GTCCAGAAAGTCACTATGCAAACTCAGAGAAGAGCC...ATTCATCTGTTTACTCAGTTCCTTCCTCTTCATTGGACAGCCCAACACAACAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR-3UTR CAA 90 bp | TGGAAGGCAACTGTTGAACCCATGTTGCATACAATGATGATGTGGCCATGTTCAACTACTGTAATAGCTTaGGCCAACACTGTGGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: WKATVEPMLHTMMMWPCSTTVIA*ANTVER Trigger: TCTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGT...TGAACATGGCCACATCATCATTGTATGCAACATGGGTTCAACAGTTGCCTTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCATAGGCCAAAAAGCTCACAGATTTTTGGAGGCAGTGGCTCTTCTCTGAGTACTGTTGAACCCATGTaGCATACAATGATGATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: HHRPKSSQIFGGSGSSLSTVEPM*HTMMMW Trigger: CCACATCATCATTGTATGCAACATGGGTTCAACAGT...ACTCAGAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTTTTTGGCCTATGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCCTCCCCCATGCGTTGCTGTGTGTCTTCCTATATGACTTCTCATTATCGTACTGTTGAACCCATGTaGCATACAATGATGATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VSSPMRCCVSSYMTSHYRTVEPM*HTMMMW Trigger: CCACATCATCATTGTATGCAACATGGGTTCAACAGT...ACGATAATGAGAAGTCATATAGGAAGACACACAGCAACGCATGGGGGAGGAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR TCA 72 bp | AAAGCTCACAGATTTTTGGAGGCAGTGGCTCTTCTCTaGGTTTGCATAGTGACTTTCTGGACACTTCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: KAHRFLEAVALL*VCIVTFWTLHA Trigger: TGCATGAAGTGTCCAGAAAGTCACTATGCAAACTCAGAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| 3UTR GCA 72 bp | CCATCTCACCATTCTAGCTGGAACTGTGGCCTTGAATaGAATAACTACTGTAATAGCTTTGGCCAACACTGT | + |
|
Preference number: 3 (lower is better) Translates to: PSHHSSWNCGLE*NNYCNSFGQHC Trigger: ACAGTGTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCCACAGTTCCAGCTAGAATGGTGAGATGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR CCA 72 bp | GCCATGTTCAGTCTGAGTATCTTGATCAATGAAGGGTaGAGAGGTAACCAGCCAGATTCCACAGATAATAAG | + |
|
Preference number: 3 (lower is better) Translates to: AMFSLSILINEG*RGNQPDSTDNK Trigger: CTTATTATCTGTGGAATCTGGCTGGTTACCTCTCCACCCTTCATTGATCAAGATACTCAGACTGAACATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCATAGGCCAAAAAGCTCACAGATTTTTGGAGGCAGTGGCTCTTCTCTGAGTATTGGTAATTGGTTGTaGGTACTGAGTGAGAGTTCA | + |
|
Preference number: 3 (lower is better) Translates to: HHRPKSSQIFGGSGSSLSIGNWL*VLSESS Trigger: TGAACTCTCACTCAGTACCAACAACCAATTACCAAT...ACTCAGAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTTTTTGGCCTATGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233177.2 |
||
| 3UTR-3UTR CAA 90 bp | CACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGGAGGAAGTAATTGGTAATTGGTaGTTGGTACTGAGTGAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: HFHNYHDFPLTAMVDREEVIGNW*LVLSES Trigger: ACTCTCACTCAGTACCAACAACCAATTACCAATTAC...TTCCTCCCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233177.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAAGCTAAAATGGAGAACACTTCCATAACTACCATGACTTTCCCCTTACTGACTACTGTAATAGCTTaGGCCAACACTGTGGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LEAKMENTSITTMTFPLLTTVIA*ANTVER Trigger: TCTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGT...CAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTCTCCATTTTAGCTTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | CATCATAGGCCAAAAAGCTCACAGATTTTTGGAGGCAGTGGCTCTTCTCTGAGTAAGAGTGGTACACACTaGAAGTGCTGTTTGTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: HHRPKSSQIFGGSGSSLSKSGTH*KCCLFL Trigger: CAAAAACAAACAGCACTTCAAGTGTGTACCACTCTT...ACTCAGAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTTTTTGGCCTATGATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 |
||
| 3UTR-3UTR CAA 90 bp | GTTTCCTCCCCCATGCGTTGCTGTGTGTCTTCCTATATGACTTCTCATTATCGTCCAGGACCATCTGAATaGAAGCAACAAAAAGACTAT | + |
|
Preference number: 3 (lower is better) Translates to: VSSPMRCCVSSYMTSHYRPGPSE*KQQKDY Trigger: ATAGTCTTTTTGTTGCTTCAATTCAGATGGTCCTGG...ACGATAATGAGAAGTCATATAGGAAGACACACAGCAACGCATGGGGGAGGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | GAACACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGGAGTACATATCTGTCTCATaGGAAATCTCATTGTCGGCA | + |
|
Preference number: 3 (lower is better) Translates to: EHFHNYHDFPLTAMVDREYISVS*EISLSA Trigger: TGCCGACAATGAGATTTCCAATGAGACAGATATGTA...CTCCCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR TCA 72 bp | TCTGGTATGATCAGACCAACCCAGGACCATCTGAATTaGAGCAACAAAAAGACTATAGCAAGCGACAGAGAT | + |
|
Preference number: 3 (lower is better) Translates to: SGMIRPTQDHLN*SNKKTIASDRD Trigger: ATCTCTGTCGCTTGCTATAGTCTTTTTGTTGCTTCAATTCAGATGGTCCTGGGTTGGTCTGATCATACCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR CCA 72 bp | GGAGAGGTAACCAGCCAGATTCCACAGATAATAAGTTaGATCAGTGTACAGATGGGAATGATGAAATTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GEVTSQIPQIIS*ISVQMGMMKLG Trigger: CCCTAATTTCATCATTCCCATCTGTACACTGATCCAACTTATTATCTGTGGAATCTGGCTGGTTACCTCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | GGCCTTGAATGCAATAACTACTGTAATAGCTTTGGCCAACACTGTGGAGAGAGCGTTGTCCAGAGTAAGTaGATAGATTTTCTCTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: GLECNNYCNSFGQHCGESVVQSK*IDFLSC Trigger: ACATGAGAGAAAATCTATCAACTTACTCTGGACAAC...GCTCTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | GGAGAACACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGGTTGTCCAGAGTAAGTaGATAGATTTTCTCTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: GEHFHNYHDFPLTAMVDRVVQSK*IDFLSC Trigger: ACATGAGAGAAAATCTATCAACTTACTCTGGACAAC...CCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCGGCTCTTCTCTGAGTTaGCATAGTGACTTTCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SVTHILFTSSKFLHKCKFGSSLS*HSDFLD Trigger: GTCCAGAAAGTCACTATGCAAACTCAGAGAAGAGCC...GAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | GCCCATGAAACATCTGATCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCTTCAGTCTGAGTATCTaGATCAATGAAGGGTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: AHETSDQSLTSFSQALSFFSLSI*INEGWR Trigger: TCTCCACCCTTCATTGATCAAGATACTCAGACTGAA...GAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGATCAGATGTTTCATGGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGAAGGCAACTGTTGAACCCATGTTGCATACAATGATGATGTGGCCATGTTCAAAGAGTGGTACACACTaGAAGTGCTGTTTGTTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: WKATVEPMLHTMMMWPCSKSGTH*KCCLFL Trigger: CAAAAACAAACAGCACTTCAAGTGTGTACCACTCTT...TGAACATGGCCACATCATCATTGTATGCAACATGGGTTCAACAGTTGCCTTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 |
||
| 3UTR-3UTR CAA 90 bp | AATGATGTAGCACTTGGGGGCAAAAATCAATATAAAGAGTGCTACACTGGAAGCACTGTTGAACCCATGTaGCATACAATGATGATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: NDVALGGKNQYKECYTGSTVEPM*HTMMMW Trigger: CCACATCATCATTGTATGCAACATGGGTTCAACAGT...GCTTCCAGTGTAGCACTCTTTATATTGATTTTTGCCCCCAAGTGCTACATCATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCATGTGGAAGGCAACTGTaGAACCCATGTTGCATACAA | + |
|
Preference number: 3 (lower is better) Translates to: LTSFSQALSFYTNASSNSCGRQL*NPCCIQ Trigger: TTGTATGCAACATGGGTTCAACAGTTGCCTTCCACA...TGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTTCAGTCTGAGTATCTaGATCAATGAAGGGTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLTSFSQALSFYTNASSNFSLSI*INEGWR Trigger: TCTCCACCCTTCATTGATCAAGATACTCAGACTGAA...GTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | TCAATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCTGTGGAAGGCAACTGTaGAACCCATGTTGCATACAA | + |
|
Preference number: 3 (lower is better) Translates to: SIKFSQTQAKNTSTRSSICGRQL*NPCCIQ Trigger: TTGTATGCAACATGGGTTCAACAGTTGCCTTCCACA...GATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGGAAGCTAAAATGGAGAACACTTCCATAACTACCATGACTTTCCCCTTACTGCAGGGCCAGAACAAATaGGTAGTTCTTAAACTTATA | + |
|
Preference number: 3 (lower is better) Translates to: LEAKMENTSITTMTFPLLQGQNK*VVLKLI Trigger: TATAAGTTTAAGAACTACCAATTTGTTCTGGCCCTG...CAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTCTCCATTTTAGCTTCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCATGTTCAGTCTGAGTATCTaGATCAATGAAGGGTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: IKFSQTQAKNTSTRSSIMFSLSI*INEGWR Trigger: TCTCCACCCTTCATTGATCAAGATACTCAGACTGAA...CATGATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | CACTTAGAGAATAGGTTCCTACTTTCACCTTTAATCCAAGACCACTTGGAAAATTTCAGTCTGAGTATCTaGATCAATGAAGGGTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: HLENRFLLSPLIQDHLENFSLSI*INEGWR Trigger: TCTCCACCCTTCATTGATCAAGATACTCAGACTGAA...ATTTTCCAAGTGGTCTTGGATTAAAGGTGAAAGTAGGAACCTATTCTCTAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGGGAATGATGAAATTAGGGGCTCTTGATACCATTAACCATCTCACCATTCTAAAGTGCTGTTTGTTTTaGTGTTTTCAGCTATGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: MGMMKLGALDTINHLTILKCCLF*CFQLCW Trigger: CCAGCATAGCTGAAAACACAAAAACAAACAGCACTT...TAGAATGGTGAGATGGTTAATGGTATCAAGAGCCCCTAATTTCATCATTCCCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233147.2 |
||
| 3UTR-3UTR CAA 90 bp | CACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTGGTCAAAATGGTGTCTaGGAAGTAAATCCAAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: HILFTSSKFLHKCKFQLSGQNGV*EVNPKK Trigger: CTTCTTTGGATTTACTTCCAAGACACCATTTTGACC...ACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR GCA 72 bp | TCTCTGAGTTTGCATAGTGACTTTCTGGACACTTCATaGACTGATACATATCTGTCTCATTGGAAATCTCAT | + |
|
Preference number: 3 (lower is better) Translates to: SLSLHSDFLDTS*TDTYLSHWKSH Trigger: ATGAGATTTCCAATGAGACAGATATGTATCAGTGCATGAAGTGTCCAGAAAGTCACTATGCAAACTCAGAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | CACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTGTTGTCCAGAGTAAGTaGATAGATTTTCTCTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: HILFTSSKFLHKCKFQLSVVQSK*IDFLSC Trigger: ACATGAGAGAAAATCTATCAACTTACTCTGGACAAC...ACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCACGTTGTCCAGAGTAAGTaGATAGATTTTCTCTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: ILFTSSKFLHKCKFQLSHVVQSK*IDFLSC Trigger: ACATGAGAGAAAATCTATCAACTTACTCTGGACAAC...GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCACAGGGCCAGAACAAATaGGTAGTTCTTAAACTTATA | + |
|
Preference number: 3 (lower is better) Translates to: LTSFSQALSFYTNASSNSQGQNK*VVLKLI Trigger: TATAAGTTTAAGAACTACCAATTTGTTCTGGCCCTG...TGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR GCA 72 bp | TGTATACAGAAAAAGTACTTTATACCCATCAGGTTATaGCACACTAATATAATCACGGGACAAAAGCCCAAC | + |
|
Preference number: 3 (lower is better) Translates to: CIQKKYFIPIRL*HTNIITGQKPN Trigger: GTTGGGCTTTTGTCCCGTGATTATATTAGTGTGGCATAACCTGATGGGTATAAAGTACTTTTTCTGTATACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR GCA 72 bp | TCTCTGAGTTTGCATAGTGACTTTCTGGACACTTCATaGACTGATACATATCTTCCTGTAATTTCTACATCT | + |
|
Preference number: 3 (lower is better) Translates to: SLSLHSDFLDTS*TDTYLPVISTS Trigger: AGATGTAGAAATTACAGGAAGATATGTATCAGTGCATGAAGTGTCCAGAAAGTCACTATGCAAACTCAGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233177.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTTTCTGGACACTTCATGCACTGATACATATCTGTCTCATTGGAAATCTCATTCAGGGCCAGAACAAATaGGTAGTTCTTAAACTTATA | + |
|
Preference number: 3 (lower is better) Translates to: TFWTLHALIHICLIGNLIQGQNK*VVLKLI Trigger: TATAAGTTTAAGAACTACCAATTTGTTCTGGCCCTG...AATGAGATTTCCAATGAGACAGATATGTATCAGTGCATGAAGTGTCCAGAAAGT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR TCA 72 bp | AAAAAGGAACAAATTTTAAGGGTGAGTGTCCTCTTCTaGAGTCAGCTGTGTACAAAGTCAGTATTTGTCATT | + |
|
Preference number: 3 (lower is better) Translates to: KKEQILRVSVLF*SQLCTKSVFVI Trigger: AATGACAAATACTGACTTTGTACACAGCTGACTTCAGAAGAGGACACTCACCCTTAAAATTTGTTCCTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233147.2 |
||
| 3UTR TCA 72 bp | AAACTTATACAAATTTTAAGGGTGAGTGTCCTCTTCTaGAGTCAGCTGTGTACAAAGTCAGTATTTGTCATT | + |
|
Preference number: 3 (lower is better) Translates to: KLIQILRVSVLF*SQLCTKSVFVI Trigger: AATGACAAATACTGACTTTGTACACAGCTGACTTCAGAAGAGGACACTCACCCTTAAAATTTGTATAAGTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233957.2 |
||
| 3UTR CCA 72 bp | AAACAAATGCCAAAACTTAGGAAGATAGTTGTCCTCTaGGTATTTGTAGGGATTAACTGTTTGGACAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: KQMPKLRKIVVL*VFVGINCLDKI Trigger: AATTTTGTCCAAACAGTTAATCCCTACAAATACCCAGAGGACAACTATCTTCCTAAGTTTTGGCATTTGTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR CAA 72 bp | TCGGCACAGGGAATACAATCAAAGCAGCAGACAGCCTaGCCTTCCTGGACAGCTTTCCTGAATCCAGGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SAQGIQSKQQTA*PSWTAFLNPGL Trigger: TAGGCCTGGATTCAGGAAAGCTGTCCAGGAAGGCAAGGCTGTCTGCTGCTTTGATTGTATTCCCTGTGCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| CDS-3UTR GCA 90 bp | GAACACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGGAGAAGTTTCCTCCCCCATaGGTTGCTGTGTGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: EHFHNYHDFPLTAMVDREKFPPP*VAVCLP Trigger: AGGAAGACACACAGCAACGCATGGGGGAGGAAACTT...CTCCCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCAAATTCCTGGACAAGAAGGCCATGGTGTAGCTACCAAGTGCTAAGGAGCATGGCTGGGTCAAAATaGTGTCTTGGAAGTAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: QANSWTRRPWCSYQVLRSMAGSK*CLGSKS Trigger: GGATTTACTTCCAAGACACCATTTTGACCCAGCCAT...GCTCCTTAGCACTTGGTAGCTACACCATGGCCTTCTTGTCCAGGAATTTGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR TCA 90 bp | TTGGCCAACACTGTGGAGAGAGCCACAGTGAACAAAATTCCAAATGCTGTCTGCTGTGAGTACAACAGGTaGCTTTCTCTTCTGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LANTVERATVNKIPNAVCCEYNR*LSLLST Trigger: TGTGGACAGAAGAGAAAGTCACCTGTTGTACTCACA...GCAGACAGCATTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTGTTGGCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR GCA 90 bp | TGGAAGGCAACTGTTGAACCCATGTTGCATACAATGATGATGTGGCCATGTTCAAAGTTTCCTCCCCCATaGGTTGCTGTGTGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: WKATVEPMLHTMMMWPCSKFPPP*VAVCLP Trigger: AGGAAGACACACAGCAACGCATGGGGGAGGAAACTT...TGAACATGGCCACATCATCATTGTATGCAACATGGGTTCAACAGTTGCCTTCCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| 3UTR CAA 72 bp | CCAAATGCTGTCTGCTGCAAGATGCAGGTTGTTGTGTaGGGCTGTCCAATGAAGAGGAAGGAACTGAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PNAVCCKMQVVV*GCPMKRKELSK Trigger: TTTACTCAGTTCCTTCCTCTTCATTGGACAGCCCAACACAACAACCTGCATCTTGCAGCAGACAGCATTTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| CDS-3UTR TCA 90 bp | CTGGAAGCTAAAATGGAGAACACTTCCATAACTACCATGACTTTCCCCTTACTGGGTATCAACATCCCATaGAGAGCTCAAGACCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: LEAKMENTSITTMTFPLLGINIP*RAQDPD Trigger: GTCTGGGTCTTGAGCTCTTCATGGGATGTTGATACC...CAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTCTCCATTTTAGCTTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR TCA 90 bp | CTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCACCTGGACAGCTTTCCTaGATCCAGGCCTACAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTSFSQALSFYTNASSNSPGQLS*IQAYSS Trigger: AGAGCTGTAGGCCTGGATTCAGGAAAGCTGTCCAGG...TGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| CDS-3UTR GCA 90 bp | TCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACAGCAGCAGACAGCCTTaGCTTCCTGGACAGCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SLTSFSQALSFYTNASSNSSRQP*LPGQLS Trigger: GGAAAGCTGTCCAGGAAGGCAAGGCTGTCTGCTGCT...GTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| CDS-3UTR CCA 90 bp | GGAGAACACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGAGCCTTCTTCATTCATaGCTGGGTCAAAATGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GEHFHNYHDFPLTAMVDRSLLHS*LGQNGV Trigger: GACACCATTTTGACCCAGCCATGAATGAAGAAGGCT...CCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR CCA 90 bp | GCCCATGAAACATCTGATCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCACAGCCTTGCCTTCCTaGACAGCTTTCCTGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: AHETSDQSLTSFSQALSFTALPS*TAFLNP Trigger: TGGATTCAGGAAAGCTGTCCAGGAAGGCAAGGCTGT...GAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGATCAGATGTTTCATGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| 3UTR CAA 72 bp | TGTCGTACTGTGCATCTAAGTTTCCTCCCCCATGCGTaGCTGTGTGTCTTCCTATATGACTTCTCATTATCG | + |
|
Preference number: 4 (lower is better) Translates to: CRTVHLSFLPHA*LCVFLYDFSLS Trigger: CGATAATGAGAAGTCATATAGGAAGACACACAGCAACGCATGGGGGAGGAAACTTAGATGCACAGTACGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| CDS-3UTR TCA 90 bp | CATCATAGGCCAAAAAGCTCACAGATTTTTGGAGGCAGTGGCTCTTCTCTGAGTCAAAAGGGCCAAAGGTaGCCTGAGGTATTTTATAGA | + |
|
Preference number: 4 (lower is better) Translates to: HHRPKSSQIFGGSGSSLSQKGQR*PEVFYR Trigger: TCTATAAAATACCTCAGGTCACCTTTGGCCCTTTTG...ACTCAGAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTTTTTGGCCTATGATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR CCA 90 bp | TTGGCCAACACTGTGGAGAGAGCCACAGTGAACAAAATTCCAAATGCTGTCTGCGTCTTGGAAACTGTATaGCAGATATTTACCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LANTVERATVNKIPNAVCVLETV*QIFTRN Trigger: GTTCCTGGTAAATATCTGCCATACAGTTTCCAAGAC...GCAGACAGCATTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTGTTGGCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| CDS-3UTR CCA 90 bp | GGAGAACACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGCCATTTCTTCACCTTTaGCATATGGTTGGGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GEHFHNYHDFPLTAMVDRPFLHL*HMVGSV Trigger: TACAGACCCAACCATATGCCAAAGGTGAAGAAATGG...CCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR CCA 90 bp | GCCCATGAAACATCTGATCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCTGTCAGGCAAATTCCTaGACAAGAAGGCCATGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AHETSDQSLTSFSQALSFCQANS*TRRPWC Trigger: ACACCATGGCCTTCTTGTCCAGGAATTTGCCTGACA...GAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGATCAGATGTTTCATGGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| 3UTR CAA 72 bp | TCACAGATTTTTGGAGGCAGTGGCTCTTCTCTGAGTTaGCATAGTGACTTTCTGGACACTTCATGCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SQIFGGSGSSLS*HSDFLDTSCTD Trigger: ATCAGTGCATGAAGTGTCCAGAAAGTCACTATGCAAACTCAGAGAAGAGCCACTGCCTCCAAAAATCTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR CAA 72 bp | ACTGTGGCCTTGAATGCAATAACTACTGTAATAGCTTaGGCCAACACTGTGGAGAGAGCCACAGTGAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TVALNAITTVIA*ANTVERATVNK Trigger: TTTGTTCACTGTGGCTCTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCCACAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| 3UTR CAA 72 bp | TACAATGATGATGTGGCCATGTTCAGTCTGAGTATCTaGATCAATGAAGGGTGGAGAGGTAACCAGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YNDDVAMFSLSI*INEGWRGNQPD Trigger: ATCTGGCTGGTTACCTCTCCACCCTTCATTGATCAAGATACTCAGACTGAACATGGCCACATCATCATTGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| CDS-3UTR TCA 90 bp | AGCTTTGGCCAACACTGTGGAGAGAGCCACAGTGAACAAAATTCCAAATGCTGTGTGTGTCTTCCTATATaGCTTCTCATTATCGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SFGQHCGESHSEQNSKCCVCLPI*LLIIVF Trigger: GAACACGATAATGAGAAGTCATATAGGAAGACACAC...ACAGCATTTGGAATTTTGTTCACTGTGGCTCTCTCCACAGTGTTGGCCAAAGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR TCA 90 bp | TCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCTCCTGTTATTGGCCTTaGCGATGGGTGTGTCTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVTHILFTSSKFLHKCKFSCYWP*RWVCLC Trigger: ACAGAGACACACCCATCGTCAAGGCCAATAACAGGA...GAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| CDS-3UTR GCA 90 bp | CTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAAAGTTTCCTCCCCCATaGGTTGCTGTGTGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTSFSQALSFYTNASSNSKFPPP*VAVCLP Trigger: AGGAAGACACACAGCAACGCATGGGGGAGGAAACTT...TGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCTTGAATGCAATAACTACTGTAATAGCTTTGGCCAACACTGTGGAGAGAGGCACACACAAAAATaGGAATACATAGGAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CGLECNNYCNSFGQHCGERHTQK*EYIGAQ Trigger: TTGGGCTCCTATGTATTCCCATTTTTGTGTGTGCCT...CTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| CDS-3UTR CCA 90 bp | TGGAAGGCAACTGTTGAACCCATGTTGCATACAATGATGATGTGGCCATGTTCATTCTTCATTCATGGCTaGGTCAAAATGGTGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: WKATVEPMLHTMMMWPCSFFIHG*VKMVSW Trigger: CCAAGACACCATTTTGACCCAGCCATGAATGAAGAA...TGAACATGGCCACATCATCATTGTATGCAACATGGGTTCAACAGTTGCCTTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR CCA 90 bp | GCCCATGAAACATCTGATCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCAGCCTTCTTCATTCATaGCTGGGTCAAAATGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: AHETSDQSLTSFSQALSFSLLHS*LGQNGV Trigger: GACACCATTTTGACCCAGCCATGAATGAAGAAGGCT...GAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGATCAGATGTTTCATGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| 3UTR CAA 72 bp | ATCTGGTATGATCAGACCAACCCAGGACCATCTGAATaGAAGCAACAAAAAGACTATAGCAAGCGACAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IWYDQTNPGPSE*KQQKDYSKRQR Trigger: TCTCTGTCGCTTGCTATAGTCTTTTTGTTGCTTCAATTCAGATGGTCCTGGGTTGGTCTGATCATACCAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| CDS-3UTR TCA 90 bp | GAACACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGGAGCAGGACCATCTGAATTaGAGCAACAAAAAGACTATA | + |
|
Preference number: 4 (lower is better) Translates to: EHFHNYHDFPLTAMVDREQDHLN*SNKKTI Trigger: TATAGTCTTTTTGTTGCTTCAATTCAGATGGTCCTG...CTCCCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR TCA 90 bp | TCAATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCGGTATCAACATCCCATaGAGAGCTCAAGACCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: SIKFSQTQAKNTSTRSSIGINIP*RAQDPD Trigger: GTCTGGGTCTTGAGCTCTTCATGGGATGTTGATACC...GATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR TCA 90 bp | AATGATGTAGCACTTGGGGGCAAAAATCAATATAAAGAGTGCTACACTGGAAGCTTCTTTAGGAAAGGGTaGAGCTGCCACTGGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NDVALGGKNQYKECYTGSFFRKG*SCHWKN Trigger: ATTCTTCCAGTGGCAGCTTCACCCTTTCCTAAAGAA...GCTTCCAGTGTAGCACTCTTTATATTGATTTTTGCCCCCAAGTGCTACATCATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR GCA 90 bp | TCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCTGCTGTGATGATGAGTaGCATTCCCAAAGGCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SVTHILFTSSKFLHKCKFCCDDE*HSQRLI Trigger: GATGAGCCTTTGGGAATGGCACTCATCATCACAGCA...GAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| CDS-3UTR CCA 90 bp | CTGGAAGCTAAAATGGAGAACACTTCCATAACTACCATGACTTTCCCCTTACTGAGAAATGTTCCAATGTaGGCAGATGCTGACCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LEAKMENTSITTMTFPLLRNVPM*ADADHD Trigger: ATCATGGTCAGCATCTGCCCACATTGGAACATTTCT...CAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTCTCCATTTTAGCTTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCTTGAATGCAATAACTACTGTAATAGCTTTGGCCAACACTGTGGAGAGAATCCAAAGAAGCATTaGGTTGGCAGTTCTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: CGLECNNYCNSFGQHCGENPKKH*VGSSPK Trigger: TTTTGGAGAACTGCCAACCCAATGCTTCTTTGGATT...CTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR CCA 90 bp | TTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCATGATCCAGCCATTTCTTCACCTTTaGCATATGGTTGGGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: FSQTQAKNTSTRSSIMIQPFLHL*HMVGSV Trigger: TACAGACCCAACCATATGCCAAAGGTGAAGAAATGG...CTGGATCATGATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCTCTCACCATTCTAGCTaGAACTGTGGCCTTGAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SVTHILFTSSKFLHKCKFSHHSS*NCGLEC Trigger: GCATTCAAGGCCACAGTTCCAGCTAGAATGGTGAGA...GAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| 3UTR CAA 72 bp | ATTAACCATCTCACCATTCTAGCTGGAACTGTGGCCTaGAATGCAATAACTACTGTAATAGCTTTGGCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: INHLTILAGTVA*NAITTVIALAN Trigger: GTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCCACAGTTCCAGCTAGAATGGTGAGATGGTTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| CDS-3UTR TCA 90 bp | CACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTTGTGAGTACAACAGGTaGCTTTCTCTTCTGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: HILFTSSKFLHKCKFQLSCEYNR*LSLLST Trigger: TGTGGACAGAAGAGAAAGTCACCTGTTGTACTCACA...ACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR TCA 90 bp | TCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCTGTGAGTACAACAGGTaGCTTTCTCTTCTGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SVTHILFTSSKFLHKCKFCEYNR*LSLLST Trigger: TGTGGACAGAAGAGAAAGTCACCTGTTGTACTCACA...GAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCACTTCTTTAGGAAAGGGTaGAGCTGCCACTGGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ILFTSSKFLHKCKFQLSHFFRKG*SCHWKN Trigger: ATTCTTCCAGTGGCAGCTTCACCCTTTCCTAAAGAA...GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR TCA 90 bp | ACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCTTCTTTAGGAAAGGGTaGAGCTGCCACTGGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: THILFTSSKFLHKCKFQLFFRKG*SCHWKN Trigger: ATTCTTCCAGTGGCAGCTTCACCCTTTCCTAAAGAA...GAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR TCA 90 bp | ATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCACAGAATACCTGCATGCTaGATGACAGGAACTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILFTSSKFLHKCKFQLSHRIPAC*MTGTWL Trigger: AAGCCAAGTTCCTGTCATTCAGCATGCAGGTATTCT...GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| CDS-3UTR CCA 90 bp | CACTTCCATAACTACCATGACTTTCCCCTTACTGCTATGGTAGACAGGGAGGAAGCTATGCAGATACCATaGTTTTCCATATTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HFHNYHDFPLTAMVDREEAMQIP*FSIFSL Trigger: AAGAGAAAATATGGAAAACCATGGTATCTGCATAGC...TTCCTCCCTGTCTACCATAGCAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR CCA 90 bp | CTGGAAGCTAAAATGGAGAACACTTCCATAACTACCATGACTTTCCCCTTACTGAATCCAAAGAAGCATTaGGTTGGCAGTTCTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: LEAKMENTSITTMTFPLLNPKKH*VGSSPK Trigger: TTTTGGAGAACTGCCAACCCAATGCTTCTTTGGATT...CAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTCTCCATTTTAGCTTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR CCA 90 bp | ATGGGAATGATGAAATTAGGGGCTCTTGATACCATTAACCATCTCACCATTCTAAGCCTTCTTCATTCATaGCTGGGTCAAAATGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MGMMKLGALDTINHLTILSLLHS*LGQNGV Trigger: GACACCATTTTGACCCAGCCATGAATGAAGAAGGCT...TAGAATGGTGAGATGGTTAATGGTATCAAGAGCCCCTAATTTCATCATTCCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR CCA 90 bp | GCCCATGAAACATCTGATCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCACATATCTGTCTCATTaGAAATCTCATTGTCGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AHETSDQSLTSFSQALSFTYLSH*KSHCRH Trigger: GTGCCGACAATGAGATTTCCAATGAGACAGATATGT...GAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGATCAGATGTTTCATGGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| CDS-3UTR CCA 90 bp | CACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTGATTTTTGGAGGCAGTaGCTCTTCTCTGAGTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HILFTSSKFLHKCKFQLSDFWRQ*LFSEFA Trigger: TGCAAACTCAGAGAAGAGCCACTGCCTCCAAAAATC...ACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| CDS-3UTR CCA 90 bp | TCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACAAGCTCACAGATTTTTaGAGGCAGTGGCTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLTSFSQALSFYTNASSNKLTDF*RQWLFS Trigger: AGAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTT...GTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| CDS-3UTR CCA 90 bp | TCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTTGATCAATGAAGGGTaGAGAGGTAACCAGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLTSFSQALSFYTNASSNLINEG*RGNQPD Trigger: ATCTGGCTGGTTACCTCTCCACCCTTCATTGATCAA...GTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| CDS-3UTR TCA 90 bp | CTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCACAAAAGGGCCAAAGGTaGCCTGAGGTATTTTATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTSFSQALSFYTNASSNSQKGQR*PEVFYR Trigger: TCTATAAAATACCTCAGGTCACCTTTGGCCCTTTTG...TGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR TCA 90 bp | TTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCATGATCCAGCAGGACCATCTGAATTaGAGCAACAAAAAGACTATA | + |
|
Preference number: 4 (lower is better) Translates to: FSQTQAKNTSTRSSIMIQQDHLN*SNKKTI Trigger: TATAGTCTTTTTGTTGCTTCAATTCAGATGGTCCTG...CTGGATCATGATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR TCA 90 bp | TCAATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCTTACTGCACACAGACTaGGGAGTCATTGTAAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: SIKFSQTQAKNTSTRSSILLHTD*GVIVNP Trigger: AGGGTTTACAATGACTCCTCAGTCTGTGTGCAGTAA...GATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| CDS-3UTR GCA 90 bp | TCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCACACAGAAGAATACCTaGATGCTGAATGACAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVTHILFTSSKFLHKCKFTQKNT*MLNDRN Trigger: GTTCCTGTCATTCAGCATGCAGGTATTCTTCTGTGT...GAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| CDS-3UTR CCA 90 bp | TCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCAGGCACACACAAAAATaGGAATACATAGGAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVTHILFTSSKFLHKCKFRHTQK*EYIGAQ Trigger: TTGGGCTCCTATGTATTCCCATTTTTGTGTGTGCCT...GAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| CDS-3UTR CCA 90 bp | TCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACAGGCACACACAAAAATaGGAATACATAGGAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SLTSFSQALSFYTNASSNRHTQK*EYIGAQ Trigger: TTGGGCTCCTATGTATTCCCATTTTTGTGTGTGCCT...GTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
||
| CDS-3UTR CCA 90 bp | ACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGAAATGTTCCAATGTaGGCAGATGCTGACCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: THILFTSSKFLHKCKFQLRNVPM*ADADHD Trigger: ATCATGGTCAGCATCTGCCCACATTGGAACATTTCT...GAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR CCA 90 bp | CACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTAGAAATGTTCCAATGTaGGCAGATGCTGACCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: HILFTSSKFLHKCKFQLSRNVPM*ADADHD Trigger: ATCATGGTCAGCATCTGCCCACATTGGAACATTTCT...ACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| CDS-3UTR CCA 90 bp | TGTGGCCTTGAATGCAATAACTACTGTAATAGCTTTGGCCAACACTGTGGAGAGTTTTCCATAGTTCATTaGAAAATGCATTCCATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CGLECNNYCNSFGQHCGEFSIVH*KMHSMH Trigger: GTGCATGGAATGCATTTTCCAATGAACTATGGAAAA...CTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGTTATTGCATTCAAGGCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| CDS-3UTR CCA 90 bp | ATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCACATGGCTGGGTCAAAATaGTGTCTTGGAAGTAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: ILFTSSKFLHKCKFQLSHMAGSK*CLGSKS Trigger: GGATTTACTTCCAAGACACCATTTTGACCCAGCCAT...GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| CDS-3UTR CCA 90 bp | ATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCACTTCTTCATTCATGGCTaGGTCAAAATGGTGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ILFTSSKFLHKCKFQLSHFFIHG*VKMVSW Trigger: CCAAGACACCATTTTGACCCAGCCATGAATGAAGAA...GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| CDS-3UTR CCA 90 bp | CACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCCATTTCTTCACCTTTaGCATATGGTTGGGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HILFTSSKFLHKCKFQLSPFLHL*HMVGSV Trigger: TACAGACCCAACCATATGCCAAAGGTGAAGAAATGG...ACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| CDS-3UTR CCA 90 bp | ACTTTCTGGACACTTCATGCACTGATACATATCTGTCTCATTGGAAATCTCATTAGGCACACACAAAAATaGGAATACATAGGAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: TFWTLHALIHICLIGNLIRHTQK*EYIGAQ Trigger: TTGGGCTCCTATGTATTCCCATTTTTGTGTGTGCCT...AATGAGATTTCCAATGAGACAGATATGTATCAGTGCATGAAGTGTCCAGAAAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| CDS-3UTR CCA 90 bp | TCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCGTCTTGGAAACTGTATaGCAGATATTTACCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SVTHILFTSSKFLHKCKFVLETV*QIFTRN Trigger: GTTCCTGGTAAATATCTGCCATACAGTTTCCAAGAC...GAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| CDS-3UTR CCA 90 bp | CACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTGTCTTGGAAACTGTATaGCAGATATTTACCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HILFTSSKFLHKCKFQLSVLETV*QIFTRN Trigger: GTTCCTGGTAAATATCTGCCATACAGTTTCCAAGAC...ACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| CDS-3UTR CCA 90 bp | AAAGTCAGTATTTGTCATTCTAGCAACATTCTAGGCACTCAGGTGTCTCTTAACGTCTTGGAAACTGTATaGCAGATATTTACCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: KVSICHSSNILGTQVSLNVLETV*QIFTRN Trigger: GTTCCTGGTAAATATCTGCCATACAGTTTCCAAGAC...GTTAAGAGACACCTGAGTGCCTAGAATGTTGCTAGAATGACAAATACTGACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233147.2 ENSMUST00000233957.2 |
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| CDS-3UTR CCA 90 bp | TCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACGTCTTGGAAACTGTATaGCAGATATTTACCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLTSFSQALSFYTNASSNVLETV*QIFTRN Trigger: GTTCCTGGTAAATATCTGCCATACAGTTTCCAAGAC...GTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| CDS-3UTR CCA 90 bp | TTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCATGATCCAGGCTATGCAGATACCATaGTTTTCCATATTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSQTQAKNTSTRSSIMIQAMQIP*FSIFSL Trigger: AAGAGAAAATATGGAAAACCATGGTATCTGCATAGC...CTGGATCATGATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| CDS-3UTR CCA 90 bp | GCCCATGAAACATCTGATCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCTTTTCCATAGTTCATTaGAAAATGCATTCCATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: AHETSDQSLTSFSQALSFFSIVH*KMHSMH Trigger: GTGCATGGAATGCATTTTCCAATGAACTATGGAAAA...GAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGATCAGATGTTTCATGGGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| CDS-3UTR CCA 90 bp | CTGGAAGCTAAAATGGAGAACACTTCCATAACTACCATGACTTTCCCCTTACTGTTTTCCATAGTTCATTaGAAAATGCATTCCATGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LEAKMENTSITTMTFPLLFSIVH*KMHSMH Trigger: GTGCATGGAATGCATTTTCCAATGAACTATGGAAAA...CAGTAAGGGGAAAGTCATGGTAGTTATGGAAGTGTTCTCCATTTTAGCTTCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| CDS-3UTR CCA 90 bp | CACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTAATCCAAAGAAGCATTaGGTTGGCAGTTCTCCAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HILFTSSKFLHKCKFQLSNPKKH*VGSSPK Trigger: TTTTGGAGAACTGCCAACCCAATGCTTCTTTGGATT...ACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| CDS-3UTR CCA 90 bp | ATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCACCCACAGATAATAAGTTaGATCAGTGTACAGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ILFTSSKFLHKCKFQLSHPQIIS*ISVQMG Trigger: TCCCATCTGTACACTGATCCAACTTATTATCTGTGG...GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
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| 3UTR CAA 72 bp | TTCTTCACCTTTGGCATATGGTTGGGTCTGTATTTTTaGAAGATTCATCTCATGGATACTATAGGCAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FFTFGIWLGLYF*KIHLMDTIGNS Trigger: GCTGTTGCCTATAGTATCCATGAGATGAATCTTCAAAAAATACAGACCCAACCATATGCCAAAGGTGAAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| CDS-3UTR TCA 90 bp | CACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCAGGACCATCTGAATTaGAGCAACAAAAAGACTATA | + |
|
Preference number: 4 (lower is better) Translates to: HILFTSSKFLHKCKFQLSQDHLN*SNKKTI Trigger: TATAGTCTTTTTGTTGCTTCAATTCAGATGGTCCTG...ACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| CDS-3UTR TCA 90 bp | ATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCATGGTGTGTCTTCCTATATaGCTTCTCATTATCGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IKFSQTQAKNTSTRSSIMVCLPI*LLIIVF Trigger: GAACACGATAATGAGAAGTCATATAGGAAGACACAC...CATGATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| CDS-3UTR GCA 90 bp | CACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTAACTGTGGCCTTGAATaGAATAACTACTGTAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: HILFTSSKFLHKCKFQLSNCGLE*NNYCNS Trigger: GCTATTACAGTAGTTATTGCATTCAAGGCCACAGTT...ACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
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| CDS-3UTR CCA 90 bp | TCACAATTAGGAAGGGGATTAATTATTCTTGTGCGCCAAAGAAAAATACTACGAAGGCACACACAAAAATaGGAATACATAGGAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SQLGRGLIILVRQRKILRRHTQK*EYIGAQ Trigger: TTGGGCTCCTATGTATTCCCATTTTTGTGTGTGCCT...TCGTAGTATTTTTCTTTGGCGCACAAGAATAATTAATCCCCTTCCTAATTGTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| CDS-3UTR CCA 90 bp | TCAATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCTGCATAGTGACTTTCTaGACACTTCATGCACTGATA | + |
|
Preference number: 4 (lower is better) Translates to: SIKFSQTQAKNTSTRSSICIVTF*TLHALI Trigger: TATCAGTGCATGAAGTGTCCAGAAAGTCACTATGCA...GATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
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| 3UTR CAA 72 bp | ATAGTTGTCCTCTGGGTATTTGTAGGGATTAACTGTTaGGACAAAATTCATAAACTCAACCATCTCGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: IVVLWVFVGINC*DKIHKLNHLVM Trigger: CATGACGAGATGGTTGAGTTTATGAATTTTGTCCAAACAGTTAATCCCTACAAATACCCAGAGGACAACTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| CDS-3UTR CCA 90 bp | TCACAATTAGGAAGGGGATTAATTATTCTTGTGCGCCAAAGAAAAATACTACGAGTCTTGGAAACTGTATaGCAGATATTTACCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SQLGRGLIILVRQRKILRVLETV*QIFTRN Trigger: GTTCCTGGTAAATATCTGCCATACAGTTTCCAAGAC...TCGTAGTATTTTTCTTTGGCGCACAAGAATAATTAATCCCCTTCCTAATTGTGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000233147.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| CDS-3UTR CCA 90 bp | ATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCATGGCTATGCAGATACCATaGTTTTCCATATTTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IKFSQTQAKNTSTRSSIMAMQIP*FSIFSL Trigger: AAGAGAAAATATGGAAAACCATGGTATCTGCATAGC...CATGATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| 3UTR CAA 72 bp | AGAAAGAGTGGTACACACTTGAAGTGCTGTTTGTTTTaGTGTTTTCAGCTATGCTGGAAATTACCTTTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RKSGTHLKCCLF*CFQLCWKLPLY Trigger: ATACAAAGGTAATTTCCAGCATAGCTGAAAACACAAAAACAAACAGCACTTCAAGTGTGTACCACTCTTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233147.2 |
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| CDS-3UTR CAA 90 bp | TGGTGTAGCTACCAAGTGCTAAGGAGCAGAGGTATCCCAGTACAGTGTGGAAGGCTGTACACGATAGTCTaGGAAACTGTATGGCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: WCSYQVLRSRGIPVQCGRLYTIV*ETVWQI Trigger: TATCTGCCATACAGTTTCCAAGACTATCGTGTACAG...CCTTCCACACTGTACTGGGATACCTCTGCTCCTTAGCACTTGGTAGCTACACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 ENSMUST00000233389.2 |
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| CDS-3UTR CAA 90 bp | TTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCATGATCCAGGTCCTGTTATTGGCCTaGACGATGGGTGTGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FSQTQAKNTSTRSSIMIQVLLLA*TMGVSL Trigger: CAGAGACACACCCATCGTCAAGGCCAATAACAGGAC...CTGGATCATGATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
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| CDS-3UTR CAA 90 bp | CAGGCAAATTCCTGGACAAGAAGGCCATGGTGTAGCTACCAAGTGCTAAGGAGCTTGTACACGATAGTCTaGGAAACTGTATGGCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: QANSWTRRPWCSYQVLRSLYTIV*ETVWQI Trigger: TATCTGCCATACAGTTTCCAAGACTATCGTGTACAA...GCTCCTTAGCACTTGGTAGCTACACCATGGCCTTCTTGTCCAGGAATTTGCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233147.2 ENSMUST00000233957.2 |
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| CDS-3UTR CAA 90 bp | GAATGTGTCAGGCAAATTCCTGGACAAGAAGGCCATGGTGTAGCTACCAAGTGCCCAGGACCATCTGAATaGAAGCAACAAAAAGACTAT | + |
|
Preference number: 5 (lower is better) Translates to: ECVRQIPGQEGHGVATKCPGPSE*KQQKDY Trigger: ATAGTCTTTTTGTTGCTTCAATTCAGATGGTCCTGG...GCACTTGGTAGCTACACCATGGCCTTCTTGTCCAGGAATTTGCCTGACACATTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| CDS-3UTR CAA 90 bp | ATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCATGAAGCAGCAGACAGCCTaGCCTTCCTGGACAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: IKFSQTQAKNTSTRSSIMKQQTA*PSWTAF Trigger: GAAAGCTGTCCAGGAAGGCAAGGCTGTCTGCTGCTT...CATGATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
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| CDS-3UTR CAA 90 bp | CTCACCATTCTAGCTGGAACTGTGGCCTTGAATGCAATAACTACTGTAATAGCTCTGTACACGATAGTCTaGGAAACTGTATGGCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: LTILAGTVALNAITTVIALYTIV*ETVWQI Trigger: TATCTGCCATACAGTTTCCAAGACTATCGTGTACAG...AGCTATTACAGTAGTTATTGCATTCAAGGCCACAGTTCCAGCTAGAATGGTGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233081.2 ENSMUST00000233177.2 ENSMUST00000233389.2 |
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| CDS-3UTR CAA 90 bp | ATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCACAAAGCTCACAGATTTTaGGAGGCAGTGGCTCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILFTSSKFLHKCKFQLSHKAHRF*EAVALL Trigger: GAGAAGAGCCACTGCCTCCAAAAATCTGTGAGCTTT...GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
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| CDS-3UTR CAA 90 bp | TTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCATGATCCAGACTGTTGAACCCATGTaGCATACAATGATGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSQTQAKNTSTRSSIMIQTVEPM*HTMMMW Trigger: CCACATCATCATTGTATGCAACATGGGTTCAACAGT...CTGGATCATGATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
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| CDS-3UTR CAA 90 bp | TCAATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCGGCTCTTCTCTGAGTTaGCATAGTGACTTTCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SIKFSQTQAKNTSTRSSIGSSLS*HSDFLD Trigger: GTCCAGAAAGTCACTATGCAAACTCAGAGAAGAGCC...GATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTATTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
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| CDS-3UTR CAA 90 bp | CACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCTGTACACGATAGTCTaGGAAACTGTATGGCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: HILFTSSKFLHKCKFQLSLYTIV*ETVWQI Trigger: TATCTGCCATACAGTTTCCAAGACTATCGTGTACAG...ACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 ENSMUST00000233389.2 |
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| CDS-3UTR CAA 90 bp | ACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCCTGTACACGATAGTCTaGGAAACTGTATGGCAGATA | + |
|
Preference number: 5 (lower is better) Translates to: THILFTSSKFLHKCKFQLLYTIV*ETVWQI Trigger: TATCTGCCATACAGTTTCCAAGACTATCGTGTACAG...GAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 ENSMUST00000233389.2 |
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| CDS-3UTR CAA 90 bp | TCAGTCACTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCTCATTGGAAATCTCATaGTCGGCACAGGGAATACAA | + |
|
Preference number: 5 (lower is better) Translates to: SVTHILFTSSKFLHKCKFSLEIS*SAQGIQ Trigger: TTGTATTCCCTGTGCCGACAATGAGATTTCCAATGA...GAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAGTGACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| CDS-3UTR CAA 90 bp | TCAATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCACTACTGTAATAGCTTaGGCCAACACTGTGGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SIKFSQTQAKNTSTRSSITTVIA*ANTVER Trigger: TCTCTCCACAGTGTTGGCCAAAGCTATTACAGTAGT...GATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| CDS-3UTR CAA 90 bp | CTCACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCATTCAGTCTGAGTATCTaGATCAATGAAGGGTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LTSFSQALSFYTNASSNSFSLSI*INEGWR Trigger: TCTCCACCCTTCATTGATCAAGATACTCAGACTGAA...TGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| CDS-3UTR CAA 90 bp | ATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCATGTGTGGAAGGCAACTGTaGAACCCATGTTGCATACAA | + |
|
Preference number: 5 (lower is better) Translates to: IKFSQTQAKNTSTRSSIMCGRQL*NPCCIQ Trigger: TTGTATGCAACATGGGTTCAACAGTTGCCTTCCACA...CATGATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
||
| CDS-3UTR CAA 90 bp | ATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCACCCAGGACCATCTGAATaGAAGCAACAAAAAGACTAT | + |
|
Preference number: 5 (lower is better) Translates to: ILFTSSKFLHKCKFQLSHPGPSE*KQQKDY Trigger: ATAGTCTTTTTGTTGCTTCAATTCAGATGGTCCTGG...GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
||
| CDS-3UTR CAA 90 bp | ATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTCACGGTCAAAATGGTGTCTaGGAAGTAAATCCAAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: ILFTSSKFLHKCKFQLSHGQNGV*EVNPKK Trigger: CTTCTTTGGATTTACTTCCAAGACACCATTTTGACC...GTGACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| CDS-3UTR CAA 90 bp | CACATCCTTTTCACAAGCTCTAAGTTTCTACACAAATGCAAGTTCCAACTCAGTTACATATCTGTCTCATaGGAAATCTCATTGTCGGCA | + |
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Preference number: 5 (lower is better) Translates to: HILFTSSKFLHKCKFQLSYISVS*EISLSA Trigger: TGCCGACAATGAGATTTCCAATGAGACAGATATGTA...ACTGAGTTGGAACTTGCATTTGTGTAGAAACTTAGAGCTTGTGAAAAGGATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171671.3 |
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| CDS GCA 90 bp | ACCAGGAACTTTGTTTCCTGTGTAATAAATATGAAGAGGGAAAAATaGACCAATTGTCACATCTCCTTCACGGTAAAAGTAATCACTGCA | + |
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Preference number: 5 (lower is better) Translates to: TRNFVSCVINMKREK*TNCHISFTVKVITA Trigger: TGCAGTGATTACTTTTACCGTGAAGGAGATGTGACAATTGGTGCATTTTTCCCTCTTCATATTTATTACACAGGAAACAAAGTTCCTGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| CDS-3UTR CAA 90 bp | TCAATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCGGTCAAAATGGTGTCTaGGAAGTAAATCCAAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: SIKFSQTQAKNTSTRSSIGQNGV*EVNPKK Trigger: CTTCTTTGGATTTACTTCCAAGACACCATTTTGACC...GATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTATTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| CDS-3UTR CAA 90 bp | CACTTAGAGAATAGGTTCCTACTTTCACCTTTAATCCAAGACCACTTGGAAAATTTGTACACGATAGTCTaGGAAACTGTATGGCAGATA | + |
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Preference number: 5 (lower is better) Translates to: HLENRFLLSPLIQDHLENLYTIV*ETVWQI Trigger: TATCTGCCATACAGTTTCCAAGACTATCGTGTACAA...ATTTTCCAAGTGGTCTTGGATTAAAGGTGAAAGTAGGAACCTATTCTCTAAGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233147.2 ENSMUST00000233957.2 |
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| CDS-3UTR CAA 90 bp | TCAATAAAATTCTCACAAACACAAGCCAAGAACACATCAACACGATCATCCATCCAGGGCCAGAACAAATaGGTAGTTCTTAAACTTATA | + |
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Preference number: 5 (lower is better) Translates to: SIKFSQTQAKNTSTRSSIQGQNK*VVLKLI Trigger: TATAAGTTTAAGAACTACCAATTTGTTCTGGCCCTG...GATGGATGATCGTGTTGATGTGTTCTTGGCTTGTGTTTGTGAGAATTTTATTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| CDS CCA 90 bp | TATCCAGAGAAAAAGGAACTGTACACGATAGTCTTGGAAACTGTATaGCAGATATTTACCAGGAACTTTGTTTCCTGTGTAATAAATATG | + |
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Preference number: 5 (lower is better) Translates to: YPEKKELYTIVLETV*QIFTRNFVSCVINM Trigger: CATATTTATTACACAGGAAACAAAGTTCCTGGTAAATATCTGCCATACAGTTTCCAAGACTATCGTGTACAGTTCCTTTTTCTCTGGATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233389.2 |
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| CDS CCA 72 bp | AAAAAGGAACTGTACACGATAGTCTTGGAAACTGTATaGCAGATATTTACCAGGAACTTTGTTTCCTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: KKELYTIVLETV*QIFTRNFVSCV Trigger: TACACAGGAAACAAAGTTCCTGGTAAATATCTGCCATACAGTTTCCAAGACTATCGTGTACAGTTCCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233389.2 |
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| CDS CAA 72 bp | CTGTGTAATAAATATGAAGAGGGAAAAATGCACCAATaGTCACATCTCCTTCACGGTAAAAGTAATCACTGC | + |
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Preference number: 6 (lower is better) Translates to: LCNKYEEGKMHQ*SHLLHGKSNHC Trigger: GCAGTGATTACTTTTACCGTGAAGGAGATGTGACAATTGGTGCATTTTTCCCTCTTCATATTTATTACACAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| CDS CAA 90 bp | CTTTGTTTCCTGTGTAATAAATATGAAGAGGGAAAAATGCACCAATaGTCACATCTCCTTCACGGTAAAAGTAATCACTGCATGTTACAT | + |
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Preference number: 6 (lower is better) Translates to: LCFLCNKYEEGKMHQ*SHLLHGKSNHCMLH Trigger: ATGTAACATGCAGTGATTACTTTTACCGTGAAGGAGATGTGACAATTGGTGCATTTTTCCCTCTTCATATTTATTACACAGGAAACAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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| CDS CAA 90 bp | CAGAACAAATTGGTAGTTCTTAAACTTATACTGTACACGATAGTCTaGGAAACTGTATGGCAGATATTTACCAGGAACTTTGTTTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: QNKLVVLKLILYTIV*ETVWQIFTRNFVSC Trigger: ACAGGAAACAAAGTTCCTGGTAAATATCTGCCATACAGTTTCCAAGACTATCGTGTACAGTATAAGTTTAAGAACTACCAATTTGTTCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| CDS CAA 90 bp | TTGGTTATTAATTATCCAGAGAAAAAGGAACTGTACACGATAGTCTaGGAAACTGTATGGCAGATATTTACCAGGAACTTTGTTTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: LVINYPEKKELYTIV*ETVWQIFTRNFVSC Trigger: ACAGGAAACAAAGTTCCTGGTAAATATCTGCCATACAGTTTCCAAGACTATCGTGTACAGTTCCTTTTTCTCTGGATAATTAATAACCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233389.2 |
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| CDS CCA 72 bp | AAACTTATACTGTACACGATAGTCTTGGAAACTGTATaGCAGATATTTACCAGGAACTTTGTTTCCTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: KLILYTIVLETV*QIFTRNFVSCV Trigger: TACACAGGAAACAAAGTTCCTGGTAAATATCTGCCATACAGTTTCCAAGACTATCGTGTACAGTATAAGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233177.2 |
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| CDS CCA 72 bp | TCAAGTATATTGTACACGATAGTCTTGGAAACTGTATaGCAGATATTTACCAGGAACTTTGTTTCCTGTGTA | + |
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Preference number: 6 (lower is better) Translates to: SSILYTIVLETV*QIFTRNFVSCV Trigger: TACACAGGAAACAAAGTTCCTGGTAAATATCTGCCATACAGTTTCCAAGACTATCGTGTACAATATACTTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233147.2 ENSMUST00000233957.2 |
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| CDS CAA 72 bp | AATTATCCAGAGAAAAAGGAACTGTACACGATAGTCTaGGAAACTGTATGGCAGATATTTACCAGGAACTTT | + |
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Preference number: 6 (lower is better) Translates to: NYPEKKELYTIV*ETVWQIFTRNF Trigger: AAAGTTCCTGGTAAATATCTGCCATACAGTTTCCAAGACTATCGTGTACAGTTCCTTTTTCTCTGGATAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233389.2 |
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| CDS GCA 72 bp | TTTGTTTCCTGTGTAATAAATATGAAGAGGGAAAAATaGACCAATTGTCACATCTCCTTCACGGTAAAAGTA | + |
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Preference number: 6 (lower is better) Translates to: FVSCVINMKREK*TNCHISFTVKV Trigger: TACTTTTACCGTGAAGGAGATGTGACAATTGGTGCATTTTTCCCTCTTCATATTTATTACACAGGAAACAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000171671.3 ENSMUST00000233081.2 ENSMUST00000233147.2 ENSMUST00000233177.2 ENSMUST00000233389.2 ENSMUST00000233957.2 |
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