Pregenerated sensors for VMN2R57 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000066537Ensembl transcript IDs: ENSMUST00000165029.3, ENSMUST00000233555.2, ENSMUST00000233793.2
Found 213 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACCAAAGCTGTGAGTACAGAGAAGTCCAGTGCTGTGATGGTGAGTaGTATCCCCAAGGGCTCTTCATAGGCCAAAAAGCTCACAGATTT | + |
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Preference number: 1 (lower is better) Translates to: NQSCEYREVQCCDGE*YPQGLFIGQKAHRF Trigger: AAATCTGTGAGCTTTTTGGCCTATGAAGAGCCCTTGGGGATAGCACTCACCATCACAGCACTGGACTTCTCTGTACTCACAGCTTTGGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
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| 3UTR CCA 90 bp | AATAAAAATATTTCAAAGAAGTGGAACTGTGCTGAATCCTGGAGATaGCCTGGTCTAGTTGGCTTAAGAAGGATGTGCCAGGGCTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: NKNISKKWNCAESWR*PGLVGLRRMCQGWK Trigger: TTTCCAGCCCTGGCACATCCTTCTTAAGCCAACTAGACCAGGCCATCTCCAGGATTCAGCACAGTTCCACTTCTTTGAAATATTTTTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR CCA 90 bp | ATAAAAGGTGGAAAGGTAGCCAGCCATATTCCACAGATAATAAGTTaGATCAGTGTGCAGATGGGAATAATGAGATTTGGGGCCCTTGAT | + |
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Preference number: 1 (lower is better) Translates to: IKGGKVASHIPQIIS*ISVQMGIMRFGALD Trigger: ATCAAGGGCCCCAAATCTCATTATTCCCATCTGCACACTGATCCAACTTATTATCTGTGGAATATGGCTGGCTACCTTTCCACCTTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
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| 3UTR GCA 90 bp | TTTGACTTCGAGGTTGCTGGTCCTTGCTATGTTTTCTCTTTTGAATaGATATGTTACTACTACTACTCATATTGTTTCCTAGGCAAAGAT | + |
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Preference number: 1 (lower is better) Translates to: FDFEVAGPCYVFSFE*ICYYYYSYCFLGKD Trigger: ATCTTTGCCTAGGAAACAATATGAGTAGTAGTAGTAACATATGCATTCAAAAGAGAAAACATAGCAAGGACCAGCAACCTCGAAGTCAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAGGCAGGGTGGGTTCATaGGTGAGGGAACACCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTGRVGS*VREHPL Trigger: GAGAGGGTGTTCCCTCACCCATGAACCCACCCTGCC...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAGGATGCTTGGGGAAGTaGAGGGATGTGAGGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTGCLGK*RDVRGQ Trigger: CTGCCCCCTCACATCCCTCCACTTCCCCAAGCATCC...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAAGGGACAATAGCTCCTaGGGCAAGGTGTCCAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTRDNSS*GKVSSQ Trigger: CTGACTGGACACCTTGCCCCAGGAGCTATTGTCCCT...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAGCTGCAAGATGCAGGTaGCTGTGTTGGGCTGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTAARCR*LCWAVQ Trigger: TTGGACAGCCCAACACAGCCACCTGCATCTTGCAGC...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAGTCCAGTCAGGTTTCTaGCACCTGAAGCAGTACCTC | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTVQSGF*HLKQYL Trigger: GAGGTACTGCTTCAGGTGTCAGAAACCTGACTGGAC...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACATGTTATGGCAGGTCATaGGAACTGCCCAGATCCAGG | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTCYGRS*ELPRSR Trigger: CCTGGATCTGGGCAGTTCTCATGACCTGCCATAACA...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACACAGGTTTCTGACACCTaGAGCAGTACCTCAGTCAAC | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTQVSDT*SSTSVN Trigger: GTTGACTGAGGTACTGCTTCAGGTGTCAGAAACCTG...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAGCTGAATCCTGGAGATaGCCTGGTCTAGTTGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTAESWR*PGLVGL Trigger: TAAGCCAACTAGACCAGGCCATCTCCAGGATTCAGC...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR GCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACACTCCTGATTTACCTCTaGCCCAGTACATTGTACCCA | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTLLIYL*PSTLYP Trigger: TGGGTACAATGTACTGGGGCAGAGGTAAATCAGGAG...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR GCA 90 bp | ATGAGATTTGGGGCCCTTGATACTATTAACCACCTCACCATTCTAGATGGAGAGCTGTTTGCTGCAAGATaGAGGTGGCTGTGTTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: MRFGALDTINHLTILDGELFAAR*RWLCWA Trigger: AGCCCAACACAGCCACCTGCATCTTGCAGCAAACAG...CTCTCCATCTAGAATGGTGAGGTGGTTAATAGTATCAAGGGCCCCAAATCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAAGGATGTGCCAGGGCTaGAAAGGTGTCTCAGAAATT | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTRMCQG*KGVSEI Trigger: AATTTCTGAGACACCTTTCCAGCCCTGGCACATCCT...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAATCCTGGAGATGGCCTaGTCTAGTTGGCTTAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTILEMA*SSWLKK Trigger: CTTCTTAAGCCAACTAGACCAGGCCATCTCCAGGAT...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAGTTGGAGAGATGTTATaGCAGGTCATGAGAACTGCC | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTVGEML*QVMRTA Trigger: GGCAGTTCTCATGACCTGCCATAACATCTCTCCAAC...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR TCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCGGGTGGGTTCATGGGTaGGGGAACACCCTCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSGWVHG*GNTLSE Trigger: CTCTGAGAGGGTGTTCCCTCACCCATGAACCCACCC...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR GCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAAACCCCAGTTCTTTCTaGCCTAACATGAATCCGTCA | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTNPSSF*PNMNPS Trigger: TGACGGATTCATGTTAGGGCAGAAAGAACTGGGGTT...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR CCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCGGCAGGGTGGGTTCATaGGTGAGGGAACACCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSGRVGS*VREHPL Trigger: GAGAGGGTGTTCCCTCACCCATGAACCCACCCTGCC...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR CCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCGGATGCTTGGGGAAGTaGAGGGATGTGAGGGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSGCLGK*RDVRGQ Trigger: CTGCCCCCTCACATCCCTCCACTTCCCCAAGCATCC...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR CCA 90 bp | GATACTATTAACCACCTCACCATTCTAGATGGAGAGGTGACCTTGAATGCAGTATGCAGGTGGCTGTGTTaGGCTGTCCAATGTAGAGCA | + |
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Preference number: 2 (lower is better) Translates to: DTINHLTILDGEVTLNAVCRWLC*AVQCRA Trigger: TGCTCTACATTGGACAGCCCAACACAGCCACCTGCA...TACTGCATTCAAGGTCACCTCTCCATCTAGAATGGTGAGGTGGTTAATAGTATC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
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| 3UTR-3UTR TCA 90 bp | GTTACATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTAGGGTGGGTTCATGGGTaGGGGAACACCCTCTCAGAG | + |
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Preference number: 2 (lower is better) Translates to: VTYLQHQHFADRRRQNKLGWVHG*GNTLSE Trigger: CTCTGAGAGGGTGTTCCCTCACCCATGAACCCACCC...TAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATGTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR CCA 90 bp | GTTACATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTAGGCAGGGTGGGTTCATaGGTGAGGGAACACCCTCTC | + |
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Preference number: 2 (lower is better) Translates to: VTYLQHQHFADRRRQNKLGRVGS*VREHPL Trigger: GAGAGGGTGTTCCCTCACCCATGAACCCACCCTGCC...TAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATGTAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACATCTATGAAGTATTGCTaGAATCCCCTGACTCAATGT | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTSMKYC*NPLTQC Trigger: ACATTGAGTCAGGGGATTTCAGCAATACTTCATAGA...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR TCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCGAAGTGGAACTGTGCTaGATCCTGGAGATGGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSEVELC*ILEMAW Trigger: CCAGGCCATCTCCAGGATTCAGCACAGTTCCACTTC...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR GCA 90 bp | GATACTATTAACCACCTCACCATTCTAGATGGAGAGGTGACCTTGAATGCAGTAGTTCCAAATGCTGTTTaGTGCAAGATGCAGGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: DTINHLTILDGEVTLNAVVPNAV*CKMQVA Trigger: AGCCACCTGCATCTTGCAGCAAACAGCATTTGGAAC...TACTGCATTCAAGGTCACCTCTCCATCTAGAATGGTGAGGTGGTTAATAGTATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAAATAATCACTTCTGCTaGAGTACACTACTCTACTCC | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTNNHFC*STLLYS Trigger: GGAGTAGAGTAGTGTACTCCAGCAGAAGTGATTATT...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR CCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCAGGGACAATAGCTCCTaGGGCAAGGTGTCCAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSRDNSS*GKVSSQ Trigger: CTGACTGGACACCTTGCCCCAGGAGCTATTGTCCCT...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR CAA 90 bp | CTTGATACTATTAACCACCTCACCATTCTAGATGGAGAGGTGACCTaGAATGCAGTAACCACTACAATAGCTTTGGCTAACACTGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: LDTINHLTILDGEVT*NAVTTTIALANTVE Trigger: CTCCACAGTGTTAGCCAAAGCTATTGTAGTGGTTACTGCATTCAAGGTCACCTCTCCATCTAGAATGGTGAGGTGGTTAATAGTATCAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
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| 3UTR-3UTR TCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACATTTGCTCAGGAACTTTaGATATCCACATATGGCATA | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTFAQEL*ISTYGI Trigger: TATGCCATATGTGGATATTCAAAGTTCCTGAGCAAA...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATGTCCAGTCAGGTTTCTaGCACCTGAAGCAGTACCTC | + |
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Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNVQSGF*HLKQYL Trigger: GAGGTACTGCTTCAGGTGTCAGAAACCTGACTGGAC...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAAATATTTCAAAGAAGTaGAACTGTGCTGAATCCTGG | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTNISKK*NCAESW Trigger: CCAGGATTCAGCACAGTTCCACTTCTTTGAAATATT...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR CAA 90 bp | CCAAAAAGCTCACAGATTTCTGAAGGCAGTGATTCTTCTCTGAGTTaGCATAGTGACTTTCTGGACACTGCACACACTGATCCATATTTG | + |
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Preference number: 2 (lower is better) Translates to: PKSSQISEGSDSSLS*HSDFLDTAHTDPYL Trigger: CAAATATGGATCAGTGTGTGCAGTGTCCAGAAAGTCACTATGCAAACTCAGAGAAGAATCACTGCCTTCAGAAATCTGTGAGCTTTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATCAGGTTTCTGACACCTaGAGCAGTACCTCAGTCAAC | + |
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Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNQVSDT*SSTSVN Trigger: GTTGACTGAGGTACTGCTTCAGGTGTCAGAAACCTG...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR TCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCCTCTTCCAGAGGTCCTaGGTTCAATTCCCTGAAGAC | + |
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Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSLFQRS*VQFPED Trigger: GTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAG...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAGATTTCCTCAAACAATAATCAGGCATGGTAAGGAAGGGATGATGTTGCATCAAGAACCAAAGCTGTaGGTACAGAGAAGTCCAGTG | + |
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Preference number: 2 (lower is better) Translates to: MRFPQTIIRHGKEGMMLHQEPKL*VQRSPV Trigger: CACTGGACTTCTCTGTACTCACAGCTTTGGTTCTTG...ATGCAACATCATCCCTTCCTTACCATGCCTGATTATTGTTTGAGGAAATCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
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| 3UTR-3UTR GCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATGCAGGTCATGAGAACTaGCCAGATCCAGGAATTCAC | + |
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Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNAGHEN*PDPGIH Trigger: GTGAATTCCTGGATCTGGGCAGTTCTCATGACCTGC...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR GCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCCCAAATGCTGTTTGCTaGAAGATGCAGGTGGCTGTG | + |
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Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSPNAVC*KMQVAV Trigger: CACAGCCACCTGCATCTTGCAGCAAACAGCATTTGG...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
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| 3UTR-3UTR GCA 90 bp | ATGAGATTTGGGGCCCTTGATACTATTAACCACCTCACCATTCTAGATGGAGAGGAACAAAGTTCCAAATaGTGTTTGCTGCAAGATGCA | + |
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Preference number: 2 (lower is better) Translates to: MRFGALDTINHLTILDGEEQSSK*CLLQDA Trigger: TGCATCTTGCAGCAAACAGCATTTGGAACTTTGTTC...CTCTCCATCTAGAATGGTGAGGTGGTTAATAGTATCAAGGGCCCCAAATCTCAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
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| 3UTR-3UTR CCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACACAAGAAAATCCACTATaGATACAACTGCTAAACCTA | + |
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Preference number: 2 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTQENPL*IQLLNL Trigger: TAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTG...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| 3UTR-3UTR TCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATCTTTCTGCCCTAACATaGATCCGTCACCCACTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNLSALT*IRHPLN Trigger: GTTTAGTGGGTGACGGATTCATGTTAGGGCAGAAAG...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCCTTTCTGCCCTAACATaGATCCGTCACCCACTAAAC | + |
|
Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSLSALT*IRHPLN Trigger: GTTTAGTGGGTGACGGATTCATGTTAGGGCAGAAAG...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGAGATTTCCTCAAACAATAATCAGGCATGGTAAGGAAGGGATGATGTTGCATACACAGAAGAATACCTaGATGCTGAATGACAGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: MRFPQTIIRHGKEGMMLHTQKNT*MLNDRH Trigger: GTGCCTGTCATTCAGCATGCAGGTATTCTTCTGTGT...ATGCAACATCATCCCTTCCTTACCATGCCTGATTATTGTTTGAGGAAATCTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATAGGATGTGCCAGGGCTaGAAAGGTGTCTCAGAAATT | + |
|
Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNRMCQG*KGVSEI Trigger: AATTTCTGAGACACCTTTCCAGCCCTGGCACATCCT...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAGATTTCCTCAAACAATAATCAGGCATGGTAAGGAAGGGATGATGTTGCATCTTCTACTGTCATTCTaGGCCATGGAATTTCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: MRFPQTIIRHGKEGMMLHLLLSF*AMEFLL Trigger: CAGAAGAAATTCCATGGCTCAGAATGACAGTAGAAG...ATGCAACATCATCCCTTCCTTACCATGCCTGATTATTGTTTGAGGAAATCTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATGAAATTGAATGGGGGTaGTTGAGTCATGAAGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNEIEWG*LSHEAM Trigger: CATGGCTTCATGACTCAATCACCCCCATTCAATTTC...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCAAGCAGGTAAGGATGTaGTCGCCCTTTTACTCAGAA | + |
|
Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSKQVRM*SPFYSE Trigger: TTCTGAGTAAAAGGGCGATCACATCCTTACCTGCTT...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR GCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCAACCCCAGTTCTTTCTaGCCTAACATGAATCCGTCA | + |
|
Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSNPSSF*PNMNPS Trigger: TGACGGATTCATGTTAGGGCAGAAAGAACTGGGGTT...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATGCTTTCACAGAGCCATaGATTTTGCTCAGGAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNAFTEP*ILLRNF Trigger: AAAGTTCCTGAGCAAAATTCATGGCTCTGTGAAAGC...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCGCTTTCACAGAGCCATaGATTTTGCTCAGGAACTTT | + |
|
Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSAFTEP*ILLRNF Trigger: AAAGTTCCTGAGCAAAATTCATGGCTCTGTGAAAGC...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR GCA 90 bp | ATGAGATTTCCTCAAACAATAATCAGGCATGGTAAGGAAGGGATGATGTTGCATTCAACATCAGCACTTTaGAGACAGAAGAAGACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: MRFPQTIIRHGKEGMMLHSTSAL*RQKKTE Trigger: TTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGA...ATGCAACATCATCCCTTCCTTACCATGCCTGATTATTGTTTGAGGAAATCTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR GCA 90 bp | GTTACATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTATACAGAGAAGTCCAGTaGTGTGATGGTGAGTGCTAT | + |
|
Preference number: 2 (lower is better) Translates to: VTYLQHQHFADRRRQNKLYREVQ*CDGECY Trigger: ATAGCACTCACCATCACAGCACTGGACTTCTCTGTA...TAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATGTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| 3UTR-3UTR CCA 90 bp | GTTACATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTATGCATAGTGACTTTCTaGACACTGCACACACTGATC | + |
|
Preference number: 2 (lower is better) Translates to: VTYLQHQHFADRRRQNKLCIVTF*TLHTLI Trigger: GATCAGTGTGTGCAGTGTCCAGAAAGTCACTATGCA...TAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATGTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTACATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTACTTCTACTGTCATTCTaGGCCATGGAATTTCTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: VTYLQHQHFADRRRQNKLLLLSF*AMEFLL Trigger: CAGAAGAAATTCCATGGCTCAGAATGACAGTAGAAG...TAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATGTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATACCCATAAAAATTTGTaGACTGCCAGATCAGTCACT | + |
|
Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNTHKNL*TARSVT Trigger: AGTGACTGATCTGGCAGTTCACAAATTTTTATGGGT...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATTCTATGAAGTATTGCTaGAATCCCCTGACTCAATGT | + |
|
Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNSMKYC*NPLTQC Trigger: ACATTGAGTCAGGGGATTTCAGCAATACTTCATAGA...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR TCA 90 bp | ATGAGATTTCCTCAAACAATAATCAGGCATGGTAAGGAAGGGATGATGTTGCATGAGTTTTTGATTCTATaGAGTATTGCTGAAATCCCC | + |
|
Preference number: 2 (lower is better) Translates to: MRFPQTIIRHGKEGMMLHEFLIL*SIAEIP Trigger: GGGGATTTCAGCAATACTTCATAGAATCAAAAACTC...ATGCAACATCATCCCTTCCTTACCATGCCTGATTATTGTTTGAGGAAATCTCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCCCTAAGAATAGAAATTaGATGGGGGTGATTGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSPKNRN*MGVIES Trigger: TGACTCAATCACCCCCATTCAATTTCTATTCTTAGG...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR GCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCTCAACATCAGCACTTTaGAGACAGAAGAAGACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSSTSAL*RQKKTE Trigger: TTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGA...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATTCAACATCAGCACTTTaGAGACAGAAGAAGACAGAA | + |
|
Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNSTSAL*RQKKTE Trigger: TTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGA...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATGAGGTTGCTGGTCCTTaGTATGTTTTCTCTTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNEVAGP*YVFSFE Trigger: TTCAAAAGAGAAAACATAGCAAGGACCAGCAACCTC...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR CAA 90 bp | CTTTATTTTGGTCATATAAGGTTACATTCTAATATTCCAGGCATTTaGTCTAAGGGAAATACAAGGGAAGTTTGCCCTTACCACTGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: LYFGHIRLHSNIPGI*SKGNTREVCPYHCH Trigger: ATGGCAGTGGTAAGGGCAAACTTCCCTTGTATTTCCCTTAGACAAAATGCCTGGAATATTAGAATGTAACCTTATATGACCAAAATAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATTTTGCTCAGGAACTTTaGATATCCACATATGGCATA | + |
|
Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNFAQEL*ISTYGI Trigger: TATGCCATATGTGGATATTCAAAGTTCCTGAGCAAA...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCGTAGAAACCAGTGACTaGGAGAAAAGCATTGATAAA | + |
|
Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSVETSD*EKSIDK Trigger: TTTATCAATGCTTTTCTCTCAGTCACTGGTTTCTAC...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR TCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATGTAGAAACCAGTGACTaGGAGAAAAGCATTGATAAA | + |
|
Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNVETSD*EKSIDK Trigger: TTTATCAATGCTTTTCTCTCAGTCACTGGTTTCTAC...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR TCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCGAAAGATCTAATGGATaGCTTAAAAATGCAGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSERSNG*LKNAGE Trigger: CTCTCCTGCATTTTTAAGTCATCCATTAGATCTTTC...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATACATTAATAATCCCCTaGTTTCACAGAGCCATGAAT | + |
|
Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNTLIIP*FHRAMN Trigger: ATTCATGGCTCTGTGAAAGCAGGGGATTATTAATGT...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATAAAAGTATGACTGCATaGAATGAACTTGTCACATCC | + |
|
Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNKSMTA*NELVTS Trigger: GGATGTGACAAGTTCATTGCATGCAGTCATACTTTT...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATAATATTTCAAAGAAGTaGAACTGTGCTGAATCCTGG | + |
|
Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNNISKK*NCAESW Trigger: CCAGGATTCAGCACAGTTCCACTTCTTTGAAATATT...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATTTTCCTAGGCAAAGATaGTTTCACAAACACTTGATG | + |
|
Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNFPRQR*FHKHLM Trigger: CATCAAGTGTTTGTGAAACCATCTTTGCCTAGGAAA...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR CCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCAAAATCACAGTATGTTaGAGAGATGTTATGGCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSKITVC*RDVMAG Trigger: ACCTGCCATAACATCTCTCCAACATACTGTGATTTT...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR CCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCTTGATCAATAAAAGGTaGAAAGGTAGCCAGCCATAT | + |
|
Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSLINKR*KGSQPY Trigger: ATATGGCTGGCTACCTTTCCACCTTTTATTGATCAA...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATATGTTTGCTCATTTTTaGTGTTCTCATATCAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNMFAHF*CSHIRR Trigger: TCTCCTGATATGAGAACAGCAAAAATGAGCAAACAT...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR GCA 90 bp | CATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTATACCGCTTCATTCCAAGGATaGTGTAATGTTCAATATATG | + |
|
Preference number: 2 (lower is better) Translates to: HIFNISTLQTEEDRISYTASFQG*CNVQYM Trigger: CATATATTGAACATTACAGCATCCTTGGAATGAAGC...GGTATAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATACACTGATCCATATTTaGAAACTGAATCCAGGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNTLIHI*KLNPGK Trigger: TTTTCCTGGATTCAGTTTGCAAATATGGATCAGTGT...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| 3UTR-3UTR CCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCCAAGAAAATCCACTATaGATACAACTGCTAAACCTA | + |
|
Preference number: 2 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSQENPL*IQLLNL Trigger: TAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTG...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR GCA 72 bp | CACAAGAACCAAAGCTGTGAGTACAGAGAAGTCCAGTaGTGTGATGGTGAGTGCTATCCCCAAGGGCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: HKNQSCEYREVQ*CDGECYPQGLF Trigger: GAAGAGCCCTTGGGGATAGCACTCACCATCACAGCACTGGACTTCTCTGTACTCACAGCTTTGGTTCTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| 3UTR GCA 72 bp | TGTGAGTACAGAGAAGTCCAGTGCTGTGATGGTGAGTaGTATCCCCAAGGGCTCTTCATAGGCCAAAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: CEYREVQCCDGE*YPQGLFIGQKA Trigger: AGCTTTTTGGCCTATGAAGAGCCCTTGGGGATAGCACTCACCATCACAGCACTGGACTTCTCTGTACTCACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACACTGCATGCAATGAACTaGTCACATCCCCAGGCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTLHAMN*SHPQAS Trigger: AGAAGCCTGGGGATGTGACAAGTTCATTGCATGCAG...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR CCA 72 bp | ACAAAGTTCCAAATGCTGTTTGCTGCAAGATGCAGGTaGCTGTGTTGGGCTGTCCAATGTAGAGCAAGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: TKFQMLFAARCR*LCWAVQCRASN Trigger: GTTGCTTGCTCTACATTGGACAGCCCAACACAGCCACCTGCATCTTGCAGCAAACAGCATTTGGAACTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAAAGGTGTCTCAGAAATaGAGAACGCTGACTAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTKVSQK*RTLTSS Trigger: AGAGCTAGTCAGCGTTCTCAATTTCTGAGACACCTT...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR CCA 72 bp | ATTTCAAAGAAGTGGAACTGTGCTGAATCCTGGAGATaGCCTGGTCTAGTTGGCTTAAGAAGGATGTGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ISKKWNCAESWR*PGLVGLRRMCQ Trigger: CTGGCACATCCTTCTTAAGCCAACTAGACCAGGCCATCTCCAGGATTCAGCACAGTTCCACTTCTTTGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACATTCAACATCAGCACTTaGCAGACAGAAGAAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTFNIST*QTEEDR Trigger: TCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAA...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACATTTTGCTCAGGAACTTaGAATATCCACATATGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTFCSGT*NIHIWH Trigger: ATGCCATATGTGGATATTCAAAGTTCCTGAGCAAAA...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAACTGAGAGAAAAGCATaGATAAAATCTCAGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTTERKA*IKSQRE Trigger: CTCTCTCTGAGATTTTATCAATGCTTTTCTCTCAGT...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR CCA 72 bp | GGAAAGGTAGCCAGCCATATTCCACAGATAATAAGTTaGATCAGTGTGCAGATGGGAATAATGAGATTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GKVASHIPQIIS*ISVQMGIMRFG Trigger: CCCAAATCTCATTATTCCCATCTGCACACTGATCCAACTTATTATCTGTGGAATATGGCTGGCTACCTTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| 3UTR TCA 72 bp | ACCTCTGCCCCAGTACATTGTACCCATAAAAATTTGTaGACTGCCAGATCAGTCACTAACATTCTGTTACTG | + |
|
Preference number: 3 (lower is better) Translates to: TSAPVHCTHKNL*TARSVTNILLL Trigger: CAGTAACAGAATGTTAGTGACTGATCTGGCAGTTCACAAATTTTTATGGGTACAATGTACTGGGGCAGAGGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR TCA 72 bp | TCTACCAAGAGTGAATCAGCTGTAGAAACCAGTGACTaGGAGAAAAGCATTGATAAAATCTCAGAGAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: STKSESAVETSD*EKSIDKISERG Trigger: CCCTCTCTCTGAGATTTTATCAATGCTTTTCTCTCAGTCACTGGTTTCTACAGCTGATTCACTCTTGGTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR GCA 72 bp | ATGTGTAACTCCTGGAGGGCTACTGTAAATCATATTTaGATGTGGATGTTACTCACATTTCCTGTTTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: MCNSWRATVNHI*MWMLLTFPVWG Trigger: TCCCCAAACAGGAAATGTGAGTAACATCCACATGCAAATATGATTTACAGTAGCCCTCCAGGAGTTACACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR CCA 72 bp | AAAAATATTTCAAAGAAGTGGAACTGTGCTGAATCCTaGAGATGGCCTGGTCTAGTTGGCTTAAGAAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: KNISKKWNCAES*RWPGLVGLRRM Trigger: CATCCTTCTTAAGCCAACTAGACCAGGCCATCTCCAGGATTCAGCACAGTTCCACTTCTTTGAAATATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCAAGGTGTCTCAGAAATaGAGAACGCTGACTAGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSKVSQK*RTLTSS Trigger: AGAGCTAGTCAGCGTTCTCAATTTCTGAGACACCTT...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR TCA 72 bp | CAACTGCTAAACCTAAGAATAGAAATTGAATGGGGGTaGTTGAGTCATGAAGCCATGAACAAGAGACTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QLLNLRIEIEWG*LSHEAMNKRLS Trigger: AGAGAGTCTCTTGTTCATGGCTTCATGACTCAATCACCCCCATTCAATTTCTATTCTTAGGTTTAGCAGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCTTCAACATCAGCACTTaGCAGACAGAAGAAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSFNIST*QTEEDR Trigger: TCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAA...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCAAGGAAGGGATGATGTaGCATCTAGCCAAAGAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSKEGMM*HLAKEF Trigger: AAACTCTTTGGCTAGATGCAACATCATCCCTTCCTT...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR CAA 90 bp | CATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTATACCGATTCTTCTCTGAGTTaGCATAGTGACTTTCTGGAC | + |
|
Preference number: 3 (lower is better) Translates to: HIFNISTLQTEEDRISYTDSSLS*HSDFLD Trigger: GTCCAGAAAGTCACTATGCAAACTCAGAGAAGAATC...GGTATAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| 3UTR TCA 72 bp | CTGAATCCAGGAAAACATCAAAGACATAATCCATCATaGTCAAGTAGGCTTCATTCCAAGGATGCTGTAATG | + |
|
Preference number: 3 (lower is better) Translates to: LNPGKHQRHNPS*SSRLHSKDAVM Trigger: CATTACAGCATCCTTGGAATGAAGCCTACTTGATCATGATGGATTATGTCTTTGATGTTTTCCTGGATTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| 3UTR GCA 72 bp | GTGACTTTCTGGACACTGCACACACTGATCCATATTTaGAAACTGAATCCAGGAAAACATCAAAGACATAAT | + |
|
Preference number: 3 (lower is better) Translates to: VTFWTLHTLIHI*KLNPGKHQRHN Trigger: ATTATGTCTTTGATGTTTTCCTGGATTCAGTTTGCAAATATGGATCAGTGTGTGCAGTGTCCAGAAAGTCAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATCTACTACTACTCATATaGTTTCCTAGGCAAAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNLLLLI*FPRQRW Trigger: CCATCTTTGCCTAGGAAACAATATGAGTAGTAGTAG...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR CCA 72 bp | ACCATGTTCAACATGAGCATTTTGATCAATAAAAGGTaGAAAGGTAGCCAGCCATATTCCACAGATAATAAG | + |
|
Preference number: 3 (lower is better) Translates to: TMFNMSILINKR*KGSQPYSTDNK Trigger: CTTATTATCTGTGGAATATGGCTGGCTACCTTTCCACCTTTTATTGATCAAAATGCTCATGTTGAACATGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCACTGAGAGAAAAGCATaGATAAAATCTCAGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSTERKA*IKSQRE Trigger: CTCTCTCTGAGATTTTATCAATGCTTTTCTCTCAGT...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCAATGTTTGCTCATTTTaGCTGTTCTCATATCAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSNVCSF*LFSYQE Trigger: CTCCTGATATGAGAACAGCAAAAATGAGCAAACATT...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATACTCACATTTCCTGTTaGGGGAAGTTAAAATACGTT | + |
|
Preference number: 3 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNTHISC*GKLKYV Trigger: AACGTATTTTAACTTCCCCAAACAGGAAATGTGAGT...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATAATATTCCAGGCATTTaGTCTAAGGGAAATACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNNIPGI*SKGNTR Trigger: CCTTGTATTTCCCTTAGACAAAATGCCTGGAATATT...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR-3UTR CAA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCAATATTCCAGGCATTTaGTCTAAGGGAAATACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSNIPGI*SKGNTR Trigger: CCTTGTATTTCCCTTAGACAAAATGCCTGGAATATT...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR GCA 72 bp | ATTAATAATCCCCTGCTTTCACAGAGCCATGAATTTTaGTCAGGAACTTTGAATATCCACATATGGCATATA | + |
|
Preference number: 3 (lower is better) Translates to: INNPLLSQSHEF*SGTLNIHIWHI Trigger: TATATGCCATATGTGGATATTCAAAGTTCCTGAGCAAAATTCATGGCTCTGTGAAAGCAGGGGATTATTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAACAGCCTTCCCCTCCTaGGCAGCTTTCCTGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTTAFPS*AAFLNP Trigger: TGGATTCAGGAAAGCTGCCCAGGAGGGGAAGGCTGT...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR TCA 90 bp | AGTACAGAGAAGTCCAGTGCTGTGATGGTGAGTGCTATCCCCAAGGGCTCTTCACCACCCAGGACCAGCTaGAATAAAGCATCAAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: STEKSSAVMVSAIPKGSSPPRTS*NKASKT Trigger: TGTCTTTGATGCTTTATTTCAGCTGGTCCTGGGTGG...TGAAGAGCCCTTGGGGATAGCACTCACCATCACAGCACTGGACTTCTCTGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| CDS-3UTR TCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACATTGATTACTCAACCCTaGGAGCCAAAGAAAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTLITQP*EPKKGT Trigger: GGTCCCTTTCTTTGGCTCTCAGGGTTGAGTAATCAA...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAGAATCTGAGTCCCTCTaGGGTCATTTGGGACAATCA | + |
|
Preference number: 4 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTESESL*GHLGQS Trigger: TGATTGTCCCAAATGACCCCAGAGGGACTCAGATTC...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR TCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACATTTCTGTTGATCTCCTaGATGGTAAACATCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTFLLIS*MVNIRA Trigger: GGCCCTGATGTTTACCATTCAGGAGATCAACAGAAA...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAATGGGTGTGTCTCTGTaGTTCACAAAGACCACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTMGVSL*FTKTTR Trigger: TCTTGTGGTCTTTGTGAAGCACAGAGACACACCCAT...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACATGGGTCCAATTCATGTaGAACATGGTTACGTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTWVQFM*NMVTCA Trigger: AGCACACGTAACCATGTTCCACATGAATTGGACCCA...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACATGCATAGTGACTTTCTaGACACTGCACACACTGATC | + |
|
Preference number: 4 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTCIVTF*TLHTLI Trigger: GATCAGTGTGTGCAGTGTCCAGAAAGTCACTATGCA...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR TCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAAACTTCTCTAAAGTCTaGCAGAATCTGAGTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTNFSKV*QNLSPS Trigger: AGAGGGACTCAGATTCTGTCAGACTTTAGAGAAGTT...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR GCA 90 bp | ATGAGATTTCCTCAAACAATAATCAGGCATGGTAAGGAAGGGATGATGTTGCATCTGCCAGGGGGAGAATaGCATTCCTTCTCCATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MRFPQTIIRHGKEGMMLHLPGGE*HSFSIG Trigger: GCCAATGGAGAAGGAATGGCATTCTCCCCCTGGCAG...ATGCAACATCATCCCTTCCTTACCATGCCTGATTATTGTTTGAGGAAATCTCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAACCCTGGGGAGAATTTaGAGAAAAGGTTCCTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTTLGRI*RKGSYF Trigger: AAAGTAGGAACCTTTTCTCCAAATTCTCCCCAGGGT...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR CAA 72 bp | GAGGTGACCTTGAATGCAGTAACCACTACAATAGCTTaGGCTAACACTGTGGAGAGAGCCACAGTGAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: EVTLNAVTTTIA*ANTVERATVNK Trigger: TTTGTTCACTGTGGCTCTCTCCACAGTGTTAGCCAAAGCTATTGTAGTGGTTACTGCATTCAAGGTCACCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGATTTGGGGCCCTTGATACTATTAACCACCTCACCATTCTAGATGGAGAGTTTCTGTTGATCTCCTaGATGGTAAACATCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: MRFGALDTINHLTILDGEFLLIS*MVNIRA Trigger: GGCCCTGATGTTTACCATTCAGGAGATCAACAGAAA...CTCTCCATCTAGAATGGTGAGGTGGTTAATAGTATCAAGGGCCCCAAATCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAGGTCAAAAATGTGTCTaGGGAGTAAGTCTAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTGQKCV*GVSLKM Trigger: CATCTTTAGACTTACTCCCCAGACACATTTTTGACC...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGATTTGGGGCCCTTGATACTATTAACCACCTCACCATTCTAGATGGAGAGCTCTTCACTCATTGCTaGGTCAAAAATGTGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MRFGALDTINHLTILDGELFTHC*VKNVSG Trigger: CCCAGACACATTTTTGACCCAGCAATGAGTGAAGAG...CTCTCCATCTAGAATGGTGAGGTGGTTAATAGTATCAAGGGCCCCAAATCTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATACAGCCTTCCCCTCCTaGGCAGCTTTCCTGAATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNTAFPS*AAFLNP Trigger: TGGATTCAGGAAAGCTGCCCAGGAGGGGAAGGCTGT...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCGCTGCAAGATGCAGGTaGCTGTGTTGGGCTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSAARCR*LCWAVQ Trigger: TTGGACAGCCCAACACAGCCACCTGCATCTTGCAGC...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGATTTGGGGCCCTTGATACTATTAACCACCTCACCATTCTAGATGGAGAGAACTTCTCTAAAGTCTaGCAGAATCTGAGTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MRFGALDTINHLTILDGENFSKV*QNLSPS Trigger: AGAGGGACTCAGATTCTGTCAGACTTTAGAGAAGTT...CTCTCCATCTAGAATGGTGAGGTGGTTAATAGTATCAAGGGCCCCAAATCTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAGAACATGGTTACGTGTaGTGTAAATATGAAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTEHGYV*CKYEEE Trigger: TTCCTCTTCATATTTACAGCACACGTAACCATGTTC...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR GCA 90 bp | GTTACATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTACTGCCAGGGGGAGAATaGCATTCCTTCTCCATTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VTYLQHQHFADRRRQNKLLPGGE*HSFSIG Trigger: GCCAATGGAGAAGGAATGGCATTCTCCCCCTGGCAG...TAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATGTAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATTGCAGGTGGCTGTGTTaGGCTGTCCAATGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNCRWLC*AVQCRA Trigger: TGCTCTACATTGGACAGCCCAACACAGCCACCTGCA...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR TCA 90 bp | CATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTATACCGGCAGATATTGCCCATaGTGTTCCTGTAAGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HIFNISTLQTEEDRISYTGRYCP*CSCKCC Trigger: GCAGCACTTACAGGAACATCATGGGCAATATCTGCC...GGTATAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR TCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCGGCAGATATTGCCCATaGTGTTCCTGTAAGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSGRYCP*CSCKCC Trigger: GCAGCACTTACAGGAACATCATGGGCAATATCTGCC...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR TCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATGGCAGATATTGCCCATaGTGTTCCTGTAAGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNGRYCP*CSCKCC Trigger: GCAGCACTTACAGGAACATCATGGGCAATATCTGCC...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR GCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATAGAAAAGGGAGGATCTaGCAGGGGGAGAATGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNRKGRI*QGENAI Trigger: AATGGCATTCTCCCCCTGGCAGATCCTCCCTTTTCT...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR GCA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAGGAAATCTCATTGTCTaGACAAGGAATACAATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTGNLIV*TRNTIK Trigger: TTTGATTGTATTCCTTGTGCAGACAATGAGATTTCC...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | GTTACATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTATGCAGGTGGCTGTGTTaGGCTGTCCAATGTAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VTYLQHQHFADRRRQNKLCRWLC*AVQCRA Trigger: TGCTCTACATTGGACAGCCCAACACAGCCACCTGCA...TAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATGTAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGATTTCCTCAAACAATAATCAGGCATGGTAAGGAAGGGATGATGTTGCATTATCCCAGTACACAGTaGAAAGCAACTGCAGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: MRFPQTIIRHGKEGMMLHYPSTQ*KATAEP Trigger: GGGTTCTGCAGTTGCTTTCCACTGTGTACTGGGATA...ATGCAACATCATCCCTTCCTTACCATGCCTGATTATTGTTTGAGGAAATCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR TCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCTTGATTACTCAACCCTaGGAGCCAAAGAAAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSLITQP*EPKKGT Trigger: GGTCCCTTTCTTTGGCTCTCAGGGTTGAGTAATCAA...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR TCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCCCACCCAGGACCAGCTaGAATAAAGCATCAAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSPPRTS*NKASKT Trigger: TGTCTTTGATGCTTTATTTCAGCTGGTCCTGGGTGG...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR TCA 90 bp | CATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTATACCCCACCCAGGACCAGCTaGAATAAAGCATCAAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: HIFNISTLQTEEDRISYTPPRTS*NKASKT Trigger: TGTCTTTGATGCTTTATTTCAGCTGGTCCTGGGTGG...GGTATAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR TCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCCAAGAACCAAAGCTGTaGGTACAGAGAAGTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSQEPKL*VQRSPV Trigger: CACTGGACTTCTCTGTACTCACAGCTTTGGTTCTTG...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR TCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATCAAGAACCAAAGCTGTaGGTACAGAGAAGTCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNQEPKL*VQRSPV Trigger: CACTGGACTTCTCTGTACTCACAGCTTTGGTTCTTG...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR GCA 90 bp | GTTACATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTAAGAAAAGGGAGGATCTaGCAGGGGGAGAATGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: VTYLQHQHFADRRRQNKLRKGRI*QGENAI Trigger: AATGGCATTCTCCCCCTGGCAGATCCTCCCTTTTCT...TAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATGTAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR GCA 90 bp | ATGAGATTTCCTCAAACAATAATCAGGCATGGTAAGGAAGGGATGATGTTGCATTACAGAGAAGTCCAGTaGTGTGATGGTGAGTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: MRFPQTIIRHGKEGMMLHYREVQ*CDGECY Trigger: ATAGCACTCACCATCACAGCACTGGACTTCTCTGTA...ATGCAACATCATCCCTTCCTTACCATGCCTGATTATTGTTTGAGGAAATCTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
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| CDS-3UTR CCA 90 bp | GATACTATTAACCACCTCACCATTCTAGATGGAGAGGTGACCTTGAATGCAGTAAAAGATGCATTGGGTTaGCAGTTCTCTAAAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: DTINHLTILDGEVTLNAVKDALG*QFSKSW Trigger: CCAACTTTTAGAGAACTGCCAACCCAATGCATCTTT...TACTGCATTCAAGGTCACCTCTCCATCTAGAATGGTGAGGTGGTTAATAGTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGATTTCCTCAAACAATAATCAGGCATGGTAAGGAAGGGATGATGTTGCATCTCTTCACTCATTGCTaGGTCAAAAATGTGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: MRFPQTIIRHGKEGMMLHLFTHC*VKNVSG Trigger: CCCAGACACATTTTTGACCCAGCAATGAGTGAAGAG...ATGCAACATCATCCCTTCCTTACCATGCCTGATTATTGTTTGAGGAAATCTCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGATTTGGGGCCCTTGATACTATTAACCACCTCACCATTCTAGATGGAGAGTTCTCCATTGGCATATaGTTGTGTCTGTATTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: MRFGALDTINHLTILDGEFSIGI*LCLYLL Trigger: CAACAAATACAGACACAACCATATGCCAATGGAGAA...CTCTCCATCTAGAATGGTGAGGTGGTTAATAGTATCAAGGGCCCCAAATCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGATTTCCTCAAACAATAATCAGGCATGGTAAGGAAGGGATGATGTTGCATTGCATAGTGACTTTCTaGACACTGCACACACTGATC | + |
|
Preference number: 4 (lower is better) Translates to: MRFPQTIIRHGKEGMMLHCIVTF*TLHTLI Trigger: GATCAGTGTGTGCAGTGTCCAGAAAGTCACTATGCA...ATGCAACATCATCCCTTCCTTACCATGCCTGATTATTGTTTGAGGAAATCTCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR CCA 90 bp | CATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTATACCTATCCCAGTACACAGTaGAAAGCAACTGCAGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: HIFNISTLQTEEDRISYTYPSTQ*KATAEP Trigger: GGGTTCTGCAGTTGCTTTCCACTGTGTACTGGGATA...GGTATAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
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| CDS-3UTR TCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCTTTCTGTTGATCTCCTaGATGGTAAACATCAGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSFLLIS*MVNIRA Trigger: GGCCCTGATGTTTACCATTCAGGAGATCAACAGAAA...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR TCA 90 bp | ATGAGATTTCCTCAAACAATAATCAGGCATGGTAAGGAAGGGATGATGTTGCATAACTTCTCTAAAGTCTaGCAGAATCTGAGTCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MRFPQTIIRHGKEGMMLHNFSKV*QNLSPS Trigger: AGAGGGACTCAGATTCTGTCAGACTTTAGAGAAGTT...ATGCAACATCATCCCTTCCTTACCATGCCTGATTATTGTTTGAGGAAATCTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| CDS-3UTR GCA 90 bp | GATACTATTAACCACCTCACCATTCTAGATGGAGAGGTGACCTTGAATGCAGTAGAACATGGTTACGTGTaGTGTAAATATGAAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DTINHLTILDGEVTLNAVEHGYV*CKYEEE Trigger: TTCCTCTTCATATTTACAGCACACGTAACCATGTTC...TACTGCATTCAAGGTCACCTCTCCATCTAGAATGGTGAGGTGGTTAATAGTATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
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| CDS-3UTR GCA 90 bp | CATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTATACCATGGGTGTGTCTCTGTaGTTCACAAAGACCACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: HIFNISTLQTEEDRISYTMGVSL*FTKTTR Trigger: TCTTGTGGTCTTTGTGAAGCACAGAGACACACCCAT...GGTATAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
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| CDS-3UTR GCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATACACAGAAGAATACCTaGATGCTGAATGACAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNTQKNT*MLNDRH Trigger: GTGCCTGTCATTCAGCATGCAGGTATTCTTCTGTGT...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
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| CDS-3UTR CCA 90 bp | CATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTATACCTGGGTCCAATTCATGTaGAACATGGTTACGTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HIFNISTLQTEEDRISYTWVQFM*NMVTCA Trigger: AGCACACGTAACCATGTTCCACATGAATTGGACCCA...GGTATAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| CDS-3UTR CCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCTGGGTCCAATTCATGTaGAACATGGTTACGTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSWVQFM*NMVTCA Trigger: AGCACACGTAACCATGTTCCACATGAATTGGACCCA...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| CDS-3UTR CCA 90 bp | GTTACATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTAGAATCTGAGTCCCTCTaGGGTCATTTGGGACAATCA | + |
|
Preference number: 4 (lower is better) Translates to: VTYLQHQHFADRRRQNKLESESL*GHLGQS Trigger: TGATTGTCCCAAATGACCCCAGAGGGACTCAGATTC...TAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATGTAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| CDS-3UTR CCA 90 bp | CATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTATACCCTCTTCACTCATTGCTaGGTCAAAAATGTGTCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: HIFNISTLQTEEDRISYTLFTHC*VKNVSG Trigger: CCCAGACACATTTTTGACCCAGCAATGAGTGAAGAG...GGTATAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR GCA 90 bp | GTTACATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTAACACAGAAGAATACCTaGATGCTGAATGACAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VTYLQHQHFADRRRQNKLTQKNT*MLNDRH Trigger: GTGCCTGTCATTCAGCATGCAGGTATTCTTCTGTGT...TAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATGTAAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGATTTCCTCAAACAATAATCAGGCATGGTAAGGAAGGGATGATGTTGCATAAAGATGCATTGGGTTaGCAGTTCTCTAAAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MRFPQTIIRHGKEGMMLHKDALG*QFSKSW Trigger: CCAACTTTTAGAGAACTGCCAACCCAATGCATCTTT...ATGCAACATCATCCCTTCCTTACCATGCCTGATTATTGTTTGAGGAAATCTCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGATTTCCTCAAACAATAATCAGGCATGGTAAGGAAGGGATGATGTTGCATGGTCAAAAATGTGTCTaGGGAGTAAGTCTAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: MRFPQTIIRHGKEGMMLHGQKCV*GVSLKM Trigger: CATCTTTAGACTTACTCCCCAGACACATTTTTGACC...ATGCAACATCATCCCTTCCTTACCATGCCTGATTATTGTTTGAGGAAATCTCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | ATGAGATTTCCTCAAACAATAATCAGGCATGGTAAGGAAGGGATGATGTTGCATCCATATCTGTCTCATTaGAAATCTCATTGTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: MRFPQTIIRHGKEGMMLHPYLSH*KSHCLH Trigger: GTGCAGACAATGAGATTTCCAATGAGACAGATATGG...ATGCAACATCATCCCTTCCTTACCATGCCTGATTATTGTTTGAGGAAATCTCAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR CCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCCCACAGATAATAAGTTaGATCAGTGTGCAGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSPQIIS*ISVQMG Trigger: TCCCATCTGCACACTGATCCAACTTATTATCTGTGG...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| 3UTR CAA 72 bp | TTCAGGACATCATACCTACTTAATGTTTGCTCATTTTaGCTGTTCTCATATCAGGAGAAGCAGGTAAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FRTSYLLNVCSF*LFSYQEKQVRM Trigger: CATCCTTACCTGCTTCTCCTGATATGAGAACAGCAAAAATGAGCAAACATTAAGTAGGTATGATGTCCTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATAAAGATGCATTGGGTTaGCAGTTCTCTAAAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNKDALG*QFSKSW Trigger: CCAACTTTTAGAGAACTGCCAACCCAATGCATCTTT...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | CATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTATACCGGTCAAAAATGTGTCTaGGGAGTAAGTCTAAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: HIFNISTLQTEEDRISYTGQKCV*GVSLKM Trigger: CATCTTTAGACTTACTCCCCAGACACATTTTTGACC...GGTATAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | GTTACATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTAACCCTGGGGAGAATTTaGAGAAAAGGTTCCTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: VTYLQHQHFADRRRQNKLTLGRI*RKGSYF Trigger: AAAGTAGGAACCTTTTCTCCAAATTCTCCCCAGGGT...TAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATGTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCCCATATCTGTCTCATTaGAAATCTCATTGTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSPYLSH*KSHCLH Trigger: GTGCAGACAATGAGATTTCCAATGAGACAGATATGG...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR CCA 90 bp | GTTACATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTACCACAGATAATAAGTTaGATCAGTGTGCAGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTYLQHQHFADRRRQNKLPQIIS*ISVQMG Trigger: TCCCATCTGCACACTGATCCAACTTATTATCTGTGG...TAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATGTAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| 3UTR CAA 72 bp | TCATATTTGCATGTGGATGTTACTCACATTTCCTGTTaGGGGAAGTTAAAATACGTTCAGGACATCATACCT | + |
|
Preference number: 4 (lower is better) Translates to: SYLHVDVTHISC*GKLKYVQDIIP Trigger: AGGTATGATGTCCTGAACGTATTTTAACTTCCCCAAACAGGAAATGTGAGTAACATCCACATGCAAATATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR CAA 72 bp | GGTCATATAAGGTTACATTCTAATATTCCAGGCATTTaGTCTAAGGGAAATACAAGGGAAGTTTGCCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: GHIRLHSNIPGI*SKGNTREVCPY Trigger: GTAAGGGCAAACTTCCCTTGTATTTCCCTTAGACAAAATGCCTGGAATATTAGAATGTAACCTTATATGACC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| 3UTR CAA 72 bp | CATAATGATGATGTGACCATGTTCAACATGAGCATTTaGATCAATAAAAGGTGGAAAGGTAGCCAGCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: HNDDVTMFNMSI*INKRWKGSQPY Trigger: ATATGGCTGGCTACCTTTCCACCTTTTATTGATCAAAATGCTCATGTTGAACATGGTCACATCATCATTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCTTCTCCATTGGCATATaGTTGTGTCTGTATTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSFSIGI*LCLYLL Trigger: CAACAAATACAGACACAACCATATGCCAATGGAGAA...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATTTCTCCATTGGCATATaGTTGTGTCTGTATTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNFSIGI*LCLYLL Trigger: CAACAAATACAGACACAACCATATGCCAATGGAGAA...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CCA 90 bp | CATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTATACCTTGATCAATAAAAGGTaGAAAGGTAGCCAGCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: HIFNISTLQTEEDRISYTLINKR*KGSQPY Trigger: ATATGGCTGGCTACCTTTCCACCTTTTATTGATCAA...GGTATAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR CCA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCAACAAACTGTCTCATTaGAAATCTCATTGTCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSNKLSH*KSHCLH Trigger: GTGCAGACAATGAGATTTCCAATGAGACAGTTTGTT...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| CDS-3UTR GCA 90 bp | GTTACATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTAGAACATGGTTACGTGTaGTGTAAATATGAAGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTYLQHQHFADRRRQNKLEHGYV*CKYEEE Trigger: TTCCTCTTCATATTTACAGCACACGTAACCATGTTC...TAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATGTAAC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR GCA 90 bp | CATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTATACCGGAAATCTCATTGTCTaGACAAGGAATACAATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: HIFNISTLQTEEDRISYTGNLIV*TRNTIK Trigger: TTTGATTGTATTCCTTGTGCAGACAATGAGATTTCC...GGTATAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR GCA 90 bp | GTTACATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTAGGAAATCTCATTGTCTaGACAAGGAATACAATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VTYLQHQHFADRRRQNKLGNLIV*TRNTIK Trigger: TTTGATTGTATTCCTTGTGCAGACAATGAGATTTCC...TAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATGTAAC 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS CCA 90 bp | TCTGCACAAGGAATACAATCAAAGCAGCAGACAGCCTTCCCCTCCTaGGCAGCTTTCCTGAATCCAGGCCTACAGCTCTCACTGCACACA | + |
|
Preference number: 5 (lower is better) Translates to: SAQGIQSKQQTAFPS*AAFLNPGLQLSLHT Trigger: TGTGTGCAGTGAGAGCTGTAGGCCTGGATTCAGGAAAGCTGCCCAGGAGGGGAAGGCTGTCTGCTGCTTTGATTGTATTCCTTGTGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS TCA 90 bp | TACAATCAAAGCAGCAGACAGCCTTCCCCTCCTGGGCAGCTTTCCTaGATCCAGGCCTACAGCTCTCACTGCACACAGACTGAGGAATTT | + |
|
Preference number: 5 (lower is better) Translates to: YNQSSRQPSPPGQLS*IQAYSSHCTQTEEF Trigger: AAATTCCTCAGTCTGTGTGCAGTGAGAGCTGTAGGCCTGGATTCAGGAAAGCTGCCCAGGAGGGGAAGGCTGTCTGCTGCTTTGATTGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CAA 90 bp | AGTACAGAGAAGTCCAGTGCTGTGATGGTGAGTGCTATCCCCAAGGGCTCTTCAGCCATTCCTTCTCCATaGGCATATGGTTGTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: STEKSSAVMVSAIPKGSSAIPSP*AYGCVC Trigger: ACAGACACAACCATATGCCAATGGAGAAGGAATGGC...TGAAGAGCCCTTGGGGATAGCACTCACCATCACAGCACTGGACTTCTCTGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| CDS CCA 90 bp | GAGGATCTGCCAGGGGGAGAATGCCATTCCTTCTCCATTGGCATATaGTTGTGTCTGTATTTGTTGAACAGTCATCTCATGGAGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EDLPGGECHSFSIGI*LCLYLLNSHLMEAV Trigger: CACAGCCTCCATGAGATGACTGTTCAACAAATACAGACACAACCATATGCCAATGGAGAAGGAATGGCATTCTCCCCCTGGCAGATCCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAGCCATTCCTTCTCCATaGGCATATGGTTGTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTAIPSP*AYGCVC Trigger: ACAGACACAACCATATGCCAATGGAGAAGGAATGGC...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS TCA 90 bp | GCAGCTTTCCTGAATCCAGGCCTACAGCTCTCACTGCACACAGACTaGGGAATTTTTGTAAACTGTGTCGGCCATTGTATCATTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AAFLNPGLQLSLHTD*GIFVNCVGHCIISS Trigger: TGAGGAAATGATACAATGGCCGACACAGTTTACAAAAATTCCTCAGTCTGTGTGCAGTGAGAGCTGTAGGCCTGGATTCAGGAAAGCTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS GCA 90 bp | CTGCACACACTGATCCATATCTGTCTCATTGGAAATCTCATTGTCTaGACAAGGAATACAATCAAAGCAGCAGACAGCCTTCCCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LHTLIHICLIGNLIV*TRNTIKAADSLPLL Trigger: CAGGAGGGGAAGGCTGTCTGCTGCTTTGATTGTATTCCTTGTGCAGACAATGAGATTTCCAATGAGACAGATATGGATCAGTGTGTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAGCTCAAATCCAAGAGTaGTGTTCGGTAGAAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTAQIQE*CSVEDE Trigger: CTCATCTTCTACCGAACACAACTCTTGGATTTGAGC...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACAAGCTCTCTTCACTCATaGCTGGGTCAAAAATGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTSSLHS*LGQKCV Trigger: GACACATTTTTGACCCAGCAATGAGTGAAGAGAGCT...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGATTTGGGGCCCTTGATACTATTAACCACCTCACCATTCTAGATGGAGAGAGCTCTCTTCACTCATaGCTGGGTCAAAAATGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: MRFGALDTINHLTILDGESSLHS*LGQKCV Trigger: GACACATTTTTGACCCAGCAATGAGTGAAGAGAGCT...CTCTCCATCTAGAATGGTGAGGTGGTTAATAGTATCAAGGGCCCCAAATCTCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGAACGCTGACTAGCTCTTCCAGAGGTCCTGAGTTCAATTCCCTGAAGACATCATTGGAAATCTCATaGTCTGCACAAGGAATACAA | + |
|
Preference number: 5 (lower is better) Translates to: LRTLTSSSRGPEFNSLKTSLEIS*SAQGIQ Trigger: TTGTATTCCTTGTGCAGACAATGAGATTTCCAATGA...TGTCTTCAGGGAATTGAACTCAGGACCTCTGGAAGAGCTAGTCAGCGTTCTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS CCA 90 bp | AGTGACTTTCTGGACACTGCACACACTGATCCATATCTGTCTCATTaGAAATCTCATTGTCTGCACAAGGAATACAATCAAAGCAGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SDFLDTAHTDPYLSH*KSHCLHKEYNQSSR Trigger: TCTGCTGCTTTGATTGTATTCCTTGTGCAGACAATGAGATTTCCAATGAGACAGATATGGATCAGTGTGTGCAGTGTCCAGAAAGTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGATTTCCTCAAACAATAATCAGGCATGGTAAGGAAGGGATGATGTTGCATGCCATTCCTTCTCCATaGGCATATGGTTGTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: MRFPQTIIRHGKEGMMLHAIPSP*AYGCVC Trigger: ACAGACACAACCATATGCCAATGGAGAAGGAATGGC...ATGCAACATCATCCCTTCCTTACCATGCCTGATTATTGTTTGAGGAAATCTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGATTTGGGGCCCTTGATACTATTAACCACCTCACCATTCTAGATGGAGAGAAACAAACTGTCTCATaGGAAATCTCATTGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: MRFGALDTINHLTILDGEKQTVS*EISLSA Trigger: TGCAGACAATGAGATTTCCAATGAGACAGTTTGTTT...CTCTCCATCTAGAATGGTGAGGTGGTTAATAGTATCAAGGGCCCCAAATCTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233793.2 |
||
| CDS-3UTR CAA 90 bp | CATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTATACCGCTCAAATCCAAGAGTaGTGTTCGGTAGAAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: HIFNISTLQTEEDRISYTAQIQE*CSVEDE Trigger: CTCATCTTCTACCGAACACAACTCTTGGATTTGAGC...GGTATAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CAA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCCTGAATGACAGGCACTaGGCTTCATTGAATGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSLNDRH*ASLNVS Trigger: TGACACATTCAATGAAGCCAAGTGCCTGTCATTCAG...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR CAA 90 bp | GTGAAAGATGGACCAAGAAAATCCACTATGGATACAACTGCTAAACCTAAGAATCTGAATGACAGGCACTaGGCTTCATTGAATGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VKDGPRKSTMDTTAKPKNLNDRH*ASLNVS Trigger: TGACACATTCAATGAAGCCAAGTGCCTGTCATTCAG...ATTCTTAGGTTTAGCAGTTGTATCCATAGTGGATTTTCTTGGTCCATCTTTCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR CAA 90 bp | GTTACATATCTTCAACATCAGCACTTTGCAGACAGAAGAAGACAGAATAAGTTAAGCTCTCTTCACTCATaGCTGGGTCAAAAATGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VTYLQHQHFADRRRQNKLSSLHS*LGQKCV Trigger: GACACATTTTTGACCCAGCAATGAGTGAAGAGAGCT...TAACTTATTCTGTCTTCTTCTGTCTGCAAAGTGCTGATGTTGAAGATATGTAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS-3UTR CAA 90 bp | GAATTCACTGGATTTAAGATTAGGTTTGTGCTTTTTCTCAGGGTACTGAAATCCGATTCTTCTCTGAGTTaGCATAGTGACTTTCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EFTGFKIRFVLFLRVLKSDSSLS*HSDFLD Trigger: GTCCAGAAAGTCACTATGCAAACTCAGAGAAGAATC...GGATTTCAGTACCCTGAGAAAAAGCACAAACCTAATCTTAAATCCAGTGAATTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGATTTCCTCAAACAATAATCAGGCATGGTAAGGAAGGGATGATGTTGCATTCATTGGAAATCTCATaGTCTGCACAAGGAATACAA | + |
|
Preference number: 5 (lower is better) Translates to: MRFPQTIIRHGKEGMMLHSLEIS*SAQGIQ Trigger: TTGTATTCCTTGTGCAGACAATGAGATTTCCAATGA...ATGCAACATCATCCCTTCCTTACCATGCCTGATTATTGTTTGAGGAAATCTCAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS GCA 90 bp | TCTTCTCCATATTTTTCCATATTGCATCAGAATATGAATTCCAGGTaGCAGGAATCATTTTCACAAAGGCTAAGCAGATCCTATTACTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSPYFSILHQNMNSR*QESFSQRLSRSYYF Trigger: AAAGTAATAGGATCTGCTTAGCCTTTGTGAAAATGATTCCTGGCACCTGGAATTCATATTCTGATGCAATATGGAAAAATATGGAGAAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS CCA 72 bp | GGAATACAATCAAAGCAGCAGACAGCCTTCCCCTCCTaGGCAGCTTTCCTGAATCCAGGCCTACAGCTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: GIQSKQQTAFPS*AAFLNPGLQLS Trigger: TGAGAGCTGTAGGCCTGGATTCAGGAAAGCTGCCCAGGAGGGGAAGGCTGTCTGCTGCTTTGATTGTATTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS CAA 90 bp | GATCTGCCAGGGGGAGAATGCCATTCCTTCTCCATTGGCATATGGTaGTGTCTGTATTTGTTGAACAGTCATCTCATGGAGGCTGTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: DLPGGECHSFSIGIW*CLYLLNSHLMEAVS Trigger: GCTCACAGCCTCCATGAGATGACTGTTCAACAAATACAGACACAACCATATGCCAATGGAGAAGGAATGGCATTCTCCCCCTGGCAGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS CCA 72 bp | GGATCTGCCAGGGGGAGAATGCCATTCCTTCTCCATTaGCATATGGTTGTGTCTGTATTTGTTGAACAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GSARGRMPFLLH*HMVVSVFVEQS Trigger: TGACTGTTCAACAAATACAGACACAACCATATGCCAATGGAGAAGGAATGGCATTCTCCCCCTGGCAGATCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS CCA 72 bp | AGCTCTCTTCACTCATTGCTGGGTCAAAAATGTGTCTaGGGAGTAAGTCTAAAGATGCATTGGGTTGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: SSLHSLLGQKCV*GVSLKMHWVGS Trigger: ACTGCCAACCCAATGCATCTTTAGACTTACTCCCCAGACACATTTTTGACCCAGCAATGAGTGAAGAGAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS CCA 72 bp | CCAGGGGGAGAATGCCATTCCTTCTCCATTGGCATATaGTTGTGTCTGTATTTGTTGAACAGTCATCTCATG | + |
|
Preference number: 6 (lower is better) Translates to: PGGECHSFSIGI*LCLYLLNSHLM Trigger: CATGAGATGACTGTTCAACAAATACAGACACAACCATATGCCAATGGAGAAGGAATGGCATTCTCCCCCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS CAA 72 bp | TCCTTCTCCATTGGCATATGGTTGTGTCTGTATTTGTaGAACAGTCATCTCATGGAGGCTGTGAGCAAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SFSIGIWLCLYL*NSHLMEAVSKS Trigger: GCTCTTGCTCACAGCCTCCATGAGATGACTGTTCAACAAATACAGACACAACCATATGCCAATGGAGAAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS CAA 72 bp | GGGGGAGAATGCCATTCCTTCTCCATTGGCATATGGTaGTGTCTGTATTTGTTGAACAGTCATCTCATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: GGECHSFSIGIW*CLYLLNSHLME Trigger: CTCCATGAGATGACTGTTCAACAAATACAGACACAACCATATGCCAATGGAGAAGGAATGGCATTCTCCCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS TCA 72 bp | GCAGATCCTATTACTTTCCATAACTTCTCTAAAGTCTaGCAGAATCTGAGTCCCTCTGGGGTCATTTGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ADPITFHNFSKV*QNLSPSGVIWD Trigger: GTCCCAAATGACCCCAGAGGGACTCAGATTCTGTCAGACTTTAGAGAAGTTATGGAAAGTAATAGGATCTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS CAA 90 bp | GTATCATTTCCTCAGATAAAGACAACCGGTGACCCTGGGGAGAATTaGGAGAAAAGGTTCCTACTTTCATCTTTAATCCAAGACCCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: VSFPQIKTTGDPGEN*EKRFLLSSLIQDPL Trigger: CAACGGGTCTTGGATTAAAGATGAAAGTAGGAACCTTTTCTCCAAATTCTCCCCAGGGTCACCGGTTGTCTTTATCTGAGGAAATGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS CAA 90 bp | CCAAAAAGCTCACAGATTTCTGAAGGCAGTGATTCTTCTCTGAGTTaGCATAGTGACTTTCTGGACACTGCACACACTGATCCATATCTG | + |
|
Preference number: 6 (lower is better) Translates to: PKSSQISEGSDSSLS*HSDFLDTAHTDPYL Trigger: CAGATATGGATCAGTGTGTGCAGTGTCCAGAAAGTCACTATGCAAACTCAGAGAAGAATCACTGCCTTCAGAAATCTGTGAGCTTTTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 |
||
| CDS CAA 72 bp | CCTCAGATAAAGACAACCGGTGACCCTGGGGAGAATTaGGAGAAAAGGTTCCTACTTTCATCTTTAATCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PQIKTTGDPGEN*EKRFLLSSLIQ Trigger: TTGGATTAAAGATGAAAGTAGGAACCTTTTCTCCAAATTCTCCCCAGGGTCACCGGTTGTCTTTATCTGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS CCA 72 bp | GTACATATCCTGGAAGTAGTATGGGTCCAATTCATGTaGAACATGGTTACGTGTGCTGTAAATATGAAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VHILEVVWVQFM*NMVTCAVNMKR Trigger: CCTCTTCATATTTACAGCACACGTAACCATGTTCCACATGAATTGGACCCATACTACTTCCAGGATATGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS CAA 90 bp | CAAGAGCATATACAGCATTGTATATATTGTAGCTCTCTTCACTCATaGCTGGGTCAAAAATGTGTCTGGGGAGTAAGTCTAAAGATGCAT | + |
|
Preference number: 6 (lower is better) Translates to: QEHIQHCIYCSSLHS*LGQKCVWGVSLKMH Trigger: ATGCATCTTTAGACTTACTCCCCAGACACATTTTTGACCCAGCAATGAGTGAAGAGAGCTACAATATATACAATGCTGTATATGCTCTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS CAA 72 bp | ATACAGCATTGTATATATTGTAGCTCTCTTCACTCATaGCTGGGTCAAAAATGTGTCTGGGGAGTAAGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: IQHCIYCSSLHS*LGQKCVWGVSL Trigger: TAGACTTACTCCCCAGACACATTTTTGACCCAGCAATGAGTGAAGAGAGCTACAATATATACAATGCTGTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
||
| CDS CCA 72 bp | TCTAAAGATGCATTGGGTTGGCAGTTCTCTAAAAGTTaGCAATCAAACTCAGAAAAAGAGCAATTGAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: SKDALGWQFSKS*QSNSEKEQLKK Trigger: TTTCTTCAATTGCTCTTTTTCTGAGTTTGATTGCCAACTTTTAGAGAACTGCCAACCCAATGCATCTTTAGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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| CDS CAA 72 bp | ATAAGCATCTTCTGGGTATGTGTAGGGATTAACTGTTaGAACAAAATTCACAAACTCAACCATCTCTTCATG | + |
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Preference number: 6 (lower is better) Translates to: ISIFWVCVGINC*NKIHKLNHLFM Trigger: CATGAAGAGATGGTTGAGTTTGTGAATTTTGTTCAAACAGTTAATCCCTACACATACCCAGAAGATGCTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000165029.3 ENSMUST00000233555.2 ENSMUST00000233793.2 |
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