Pregenerated sensors for VMN2R55 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000091045Ensembl transcript IDs: ENSMUST00000167771.2, ENSMUST00000172743.9, ENSMUST00000232880.2, ENSMUST00000233763.2
Found 44 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGATGGGAAGGGACGTGGAGGTGATACTCTATGCAAACCCCAGCTaGACTCAGCTGCTGAGTGGCCAGAGAGCTGGCCTGCTGCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: LMGRDVEVILYANPS*TQLLSGQRAGLLPK Trigger: TTTGGGCAGCAGGCCAGCTCTCTGGCCACTCAGCAGCTGAGTCCAGCTGGGGTTTGCATAGAGTATCACCTCCACGTCCCTTCCCATCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS GCA 90 bp | TCTTCCCCAAGGACTGATGGGAAGGGACGTGGAGGTGATACTCTATaGAAACCCCAGCTGGACTCAGCTGCTGAGTGGCCAGAGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SSPRTDGKGRGGDTL*KPQLDSAAEWPESW Trigger: CCAGCTCTCTGGCCACTCAGCAGCTGAGTCCAGCTGGGGTTTGCATAGAGTATCACCTCCACGTCCCTTCCCATCAGTCCTTGGGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS TCA 90 bp | AGCCATGCTGGCATGTGTAGTTGGGGATGGGCTCCTCCTGCCCTGTaGGAAAGCCCATTGTCTCATAGAGGGCTCCATGCACTGAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: SHAGMCSWGWAPPAL*ESPLSHRGLHALSL Trigger: GAGACTCAGTGCATGGAGCCCTCTATGAGACAATGGGCTTTCTCACAGGGCAGGAGGAGCCCATCCCCAACTACACATGCCAGCATGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS TCA 90 bp | TGCCTGGTATGGTCAGGGCAAGTGCCATGTGCAGAGTGCCTTTGCTaGCCCACACCTGTCCTGAGACAGGGACACCCAGTAAGCCATGTA | + |
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Preference number: 5 (lower is better) Translates to: CLVWSGQVPCAECLC*PTPVLRQGHPVSHV Trigger: TACATGGCTTACTGGGTGTCCCTGTCTCAGGACAGGTGTGGGTCAGCAAAGGCACTCTGCACATGGCACTTGCCCTGACCATACCAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS GCA 90 bp | TGCAACACCTGGGAAATGCCTGGTATGGTCAGGGCAAGTGCCATGTaGAGAGTGCCTTTGCTGACCCACACCTGTCCTGAGACAGGGACA | + |
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Preference number: 5 (lower is better) Translates to: CNTWEMPGMVRASAM*RVPLLTHTCPETGT Trigger: TGTCCCTGTCTCAGGACAGGTGTGGGTCAGCAAAGGCACTCTGCACATGGCACTTGCCCTGACCATACCAGGCATTTCCCAGGTGTTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CCA 90 bp | GGAGGTGATACTCTATGCAAACCCCAGCTGGACTCAGCTGCTGAGTaGCCAGAGAGCTGGCCTGCTGCCCAAAGTCATCATCTTGGGCAA | + |
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Preference number: 5 (lower is better) Translates to: GGDTLCKPQLDSAAE*PESWPAAQSHHLGQ Trigger: TTGCCCAAGATGATGACTTTGGGCAGCAGGCCAGCTCTCTGGCCACTCAGCAGCTGAGTCCAGCTGGGGTTTGCATAGAGTATCACCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS GCA 90 bp | TGCTGTGATACAGAAGGCCAAATGTGCCTTGCAACACCTGGGAAATaGCTGGTATGGTCAGGGCAAGTGCCATGTGCAGAGTGCCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: CCDTEGQMCLATPGK*LVWSGQVPCAECLC Trigger: GCAAAGGCACTCTGCACATGGCACTTGCCCTGACCATACCAGGCATTTCCCAGGTGTTGCAAGGCACATTTGGCCTTCTGTATCACAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS GCA 90 bp | CTGCTCCTTGGGGCACAGAAGACATCTCTTCATGTCTCTTTGGTCTaGAAACTGTCCCTCAGGGCATGGACTGCAATCAAAACAGCAGTG | + |
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Preference number: 5 (lower is better) Translates to: LLLGAQKTSLHVSLV*KLSLRAWTAIKTAV Trigger: CACTGCTGTTTTGATTGCAGTCCATGCCCTGAGGGACAGTTTGCAGACCAAAGAGACATGAAGAGATGTCTTCTGTGCCCCAAGGAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CCA 90 bp | GAGTACTGCTCCTTGGGGCACAGAAGACATCTCTTCATGTCTCTTTaGTCTGCAAACTGTCCCTCAGGGCATGGACTGCAATCAAAACAG | + |
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Preference number: 5 (lower is better) Translates to: EYCSLGHRRHLFMSL*SANCPSGHGLQSKQ Trigger: CTGTTTTGATTGCAGTCCATGCCCTGAGGGACAGTTTGCAGACCAAAGAGACATGAAGAGATGTCTTCTGTGCCCCAAGGAGCAGTACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS TCA 90 bp | GAAACTGGATCTTGTCACTCAGACTGGGTAGTGAAGATGAGTAACTaGCCTGGGAAAACTTGTACAGCCCCAGAAGTCTGGCCATGGAGA | + |
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Preference number: 5 (lower is better) Translates to: ETGSCHSDWVVKMSN*PGKTCTAPEVWPWR Trigger: TCTCCATGGCCAGACTTCTGGGGCTGTACAAGTTTTCCCAGGTCAGTTACTCATCTTCACTACCCAGTCTGAGTGACAAGATCCAGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS GCA 90 bp | TCTCCTGGTGCTCACAGGCTAGCATATTGTGCAGAGCATGGGCAATaGTGTAGACAGCTGTGTAAGCAGCATCAATTTTACTCACTTCTG | + |
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Preference number: 5 (lower is better) Translates to: SPGAHRLAYCAEHGQ*CRQLCKQHQFYSLL Trigger: CAGAAGTGAGTAAAATTGATGCTGCTTACACAGCTGTCTACAGCATTGCCCATGCTCTGCACAATATGCTAGCCTGTGAGCACCAGGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CCA 90 bp | TCGAGTACTGCTCCTTGGGGCACAGAAGACATCTCTTCATGTCTGTaGGAGACACATAGACACCATTTCTGTAACACTTCTTGCTTTTTC | + |
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Preference number: 5 (lower is better) Translates to: SSTAPWGTEDISSCL*ETHRHHFCNTSCFF Trigger: GAAAAAGCAAGAAGTGTTACAGAAATGGTGTCTATGTGTCTCCCACAGACATGAAGAGATGTCTTCTGTGCCCCAAGGAGCAGTACTCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000172743.9 |
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| CDS GCA 90 bp | GACTTGAGGGTCTATCATGCCTACATGCACCAAGTGGAATACACCTaGAGGAGTCTTCTGCCCTTGGAAAATATCAAATTTTGTCACCAA | + |
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Preference number: 5 (lower is better) Translates to: DLRVYHAYMHQVEYT*RSLLPLENIKFCHQ Trigger: TTGGTGACAAAATTTGATATTTTCCAAGGGCAGAAGACTCCTGCAGGTGTATTCCACTTGGTGCATGTAGGCATGATAGACCCTCAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CCA 90 bp | ACCTGTCCTGAGACAGGGACACCCAGTAAGCCATGTAGGATGAGCTaGAAATTAGAATTGCTTAAGAAAACCAGAACAACTTTGGATGTA | + |
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Preference number: 5 (lower is better) Translates to: TCPETGTPSKPCRMS*KLELLKKTRTTLDV Trigger: TACATCCAAAGTTGTTCTGGTTTTCTTAAGCAATTCTAATTTCCAGCTCATCCTACATGGCTTACTGGGTGTCCCTGTCTCAGGACAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CCA 72 bp | AGGGACGTGGAGGTGATACTCTATGCAAACCCCAGCTaGACTCAGCTGCTGAGTGGCCAGAGAGCTGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: RDVEVILYANPS*TQLLSGQRAGL Trigger: CAGGCCAGCTCTCTGGCCACTCAGCAGCTGAGTCCAGCTGGGGTTTGCATAGAGTATCACCTCCACGTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 72 bp | GGTATGGTCAGGGCAAGTGCCATGTGCAGAGTGCCTTaGCTGACCCACACCTGTCCTGAGACAGGGACACCC | + |
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Preference number: 6 (lower is better) Translates to: GMVRASAMCRVP*LTHTCPETGTP Trigger: GGGTGTCCCTGTCTCAGGACAGGTGTGGGTCAGCAAAGGCACTCTGCACATGGCACTTGCCCTGACCATACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS TCA 72 bp | ATAAACATGTCTTCTGGGGTCTGGCTGGGGCGCAGGTaGGCAAGGAACTCAGGGAAGCCGATAGCCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: INMSSGVWLGRR*ARNSGKPIALL Trigger: CAGCAGGGCTATCGGCTTCCCTGAGTTCCTTGCTCACCTGCGCCCCAGCCAGACCCCAGAAGACATGTTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 90 bp | GAAATGCCTGGTATGGTCAGGGCAAGTGCCATGTGCAGAGTGCCTTaGCTGACCCACACCTGTCCTGAGACAGGGACACCCAGTAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: EMPGMVRASAMCRVP*LTHTCPETGTPSKP Trigger: TGGCTTACTGGGTGTCCCTGTCTCAGGACAGGTGTGGGTCAGCAAAGGCACTCTGCACATGGCACTTGCCCTGACCATACCAGGCATTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS GCA 72 bp | CAACACCTGGGAAATGCCTGGTATGGTCAGGGCAAGTaGCATGTGCAGAGTGCCTTTGCTGACCCACACCTG | + |
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Preference number: 6 (lower is better) Translates to: QHLGNAWYGQGK*HVQSAFADPHL Trigger: CAGGTGTGGGTCAGCAAAGGCACTCTGCACATGGCACTTGCCCTGACCATACCAGGCATTTCCCAGGTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 72 bp | GGCCAGAGAGCTGGCCTGCTGCCCAAAGTCATCATCTaGGGCAAGAATGATCACCCAGGACCATTGAAAGTG | + |
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Preference number: 6 (lower is better) Translates to: GQRAGLLPKVII*GKNDHPGPLKV Trigger: CACTTTCAATGGTCCTGGGTGATCATTCTTGCCCAAGATGATGACTTTGGGCAGCAGGCCAGCTCTCTGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 90 bp | CTGCTGAGTGGCCAGAGAGCTGGCCTGCTGCCCAAAGTCATCATCTaGGGCAAGAATGATCACCCAGGACCATTGAAAGTGAATTATCAG | + |
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Preference number: 6 (lower is better) Translates to: LLSGQRAGLLPKVII*GKNDHPGPLKVNYQ Trigger: CTGATAATTCACTTTCAATGGTCCTGGGTGATCATTCTTGCCCAAGATGATGACTTTGGGCAGCAGGCCAGCTCTCTGGCCACTCAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 90 bp | GCTGAACCCTGGAAGGCAGCTTTCACTGCAGATGGAGGAGGGCACTaGGAGATCCTCCTTCAACTGAACCATCATTTTGTTCCCAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: AEPWKAAFTADGGGH*EILLQLNHHFVPRR Trigger: TCTTCTGGGAACAAAATGATGGTTCAGTTGAAGGAGGATCTCCAAGTGCCCTCCTCCATCTGCAGTGAAAGCTGCCTTCCAGGGTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233763.2 |
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| CDS CAA 72 bp | CATGGAGCAGCTGCCAGGAATGGAAGTTGTGAGAATTaGTACCTTTCCTCTCCTGGTGCTCACAGGCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: HGAAARNGSCEN*YLSSPGAHRLA Trigger: TGCTAGCCTGTGAGCACCAGGAGAGGAAAGGTACAAATTCTCACAACTTCCATTCCTGGCAGCTGCTCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 90 bp | CGAGTACTGCTCCTTGGGGCACAGAAGACATCTCTTCATGTCTCTTaGGTCTGCAAACTGTCCCTCAGGGCATGGACTGCAATCAAAACA | + |
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Preference number: 6 (lower is better) Translates to: RVLLLGAQKTSLHVS*VCKLSLRAWTAIKT Trigger: TGTTTTGATTGCAGTCCATGCCCTGAGGGACAGTTTGCAGACCAAAGAGACATGAAGAGATGTCTTCTGTGCCCCAAGGAGCAGTACTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS GCA 72 bp | GGGGCACAGAAGACATCTCTTCATGTCTCTTTGGTCTaGAAACTGTCCCTCAGGGCATGGACTGCAATCAAA | + |
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Preference number: 6 (lower is better) Translates to: GAQKTSLHVSLV*KLSLRAWTAIK Trigger: TTTGATTGCAGTCCATGCCCTGAGGGACAGTTTGCAGACCAAAGAGACATGAAGAGATGTCTTCTGTGCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS TCA 72 bp | TCTTGTCACTCAGACTGGGTAGTGAAGATGAGTAACTaGCCTGGGAAAACTTGTACAGCCCCAGAAGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: SCHSDWVVKMSN*PGKTCTAPEVW Trigger: CCAGACTTCTGGGGCTGTACAAGTTTTCCCAGGTCAGTTACTCATCTTCACTACCCAGTCTGAGTGACAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 72 bp | AGGCAGCTTTCACTGCAGATGGAGGAGGGCACCTTCTaGCTTTTTCTAGGACATGGTTTCCGTCCTTGTATT | + |
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Preference number: 6 (lower is better) Translates to: RQLSLQMEEGTF*LFLGHGFRPCI Trigger: AATACAAGGACGGAAACCATGTCCTAGAAAAAGCAAGAAGGTGCCCTCCTCCATCTGCAGTGAAAGCTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000232880.2 |
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| CDS CAA 72 bp | TGGAAGGCAGCTTTCACTGCAGATGGAGGAGGGCACTaGGAGATCCTCCTTCAACTGAACCATCATTTTGTT | + |
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Preference number: 6 (lower is better) Translates to: WKAAFTADGGGH*EILLQLNHHFV Trigger: AACAAAATGATGGTTCAGTTGAAGGAGGATCTCCAAGTGCCCTCCTCCATCTGCAGTGAAAGCTGCCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233763.2 |
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| CDS CCA 72 bp | GCTCCTTGGGGCACAGAAGACATCTCTTCATGTCTGTaGGAGACACATAGACACCATTTCTGTAACACTTCT | + |
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Preference number: 6 (lower is better) Translates to: APWGTEDISSCL*ETHRHHFCNTS Trigger: AGAAGTGTTACAGAAATGGTGTCTATGTGTCTCCCACAGACATGAAGAGATGTCTTCTGTGCCCCAAGGAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000172743.9 |
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| CDS CCA 72 bp | ATGTCACTAGTCAGGGTCCGAAGAAAAGATGGAAACTaGATCTTGTCACTCAGACTGGGTAGTGAAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: MSLVRVRRKDGN*ILSLRLGSEDE Trigger: CTCATCTTCACTACCCAGTCTGAGTGACAAGATCCAGTTTCCATCTTTTCTTCGGACCCTGACTAGTGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 72 bp | GTCATCATCTTGGGCAAGAATGATCACCCAGGACCATaGAAAGTGAATTATCAGCTGGGTAACTGCATGGGA | + |
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Preference number: 6 (lower is better) Translates to: VIILGKNDHPGP*KVNYQLGNCMG Trigger: TCCCATGCAGTTACCCAGCTGATAATTCACTTTCAATGGTCCTGGGTGATCATTCTTGCCCAAGATGATGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 90 bp | CTGCCCAAAGTCATCATCTTGGGCAAGAATGATCACCCAGGACCATaGAAAGTGAATTATCAGCTGGGTAACTGCATGGGAAGATGTAAT | + |
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Preference number: 6 (lower is better) Translates to: LPKVIILGKNDHPGP*KVNYQLGNCMGRCN Trigger: ATTACATCTTCCCATGCAGTTACCCAGCTGATAATTCACTTTCAATGGTCCTGGGTGATCATTCTTGCCCAAGATGATGACTTTGGGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 72 bp | CTTCAACTGAACCATCATTTTGTTCCCAGAAGAGACTaGAGGGTCTATCATGCCTACATGCACCAAGTGGAA | + |
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Preference number: 6 (lower is better) Translates to: LQLNHHFVPRRD*RVYHAYMHQVE Trigger: TTCCACTTGGTGCATGTAGGCATGATAGACCCTCAAGTCTCTTCTGGGAACAAAATGATGGTTCAGTTGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 90 bp | GCCTACATGCACCAAGTGGAATACACCTGCAGGAGTCTTCTGCCCTaGGAAAATATCAAATTTTGTCACCAAATCTCCATTGGCATCAAA | + |
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Preference number: 6 (lower is better) Translates to: AYMHQVEYTCRSLLP*ENIKFCHQISIGIK Trigger: TTTGATGCCAATGGAGATTTGGTGACAAAATTTGATATTTTCCAAGGGCAGAAGACTCCTGCAGGTGTATTCCACTTGGTGCATGTAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CCA 72 bp | GAGACAGGGACACCCAGTAAGCCATGTAGGATGAGCTaGAAATTAGAATTGCTTAAGAAAACCAGAACAACT | + |
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Preference number: 6 (lower is better) Translates to: ETGTPSKPCRMS*KLELLKKTRTT Trigger: AGTTGTTCTGGTTTTCTTAAGCAATTCTAATTTCCAGCTCATCCTACATGGCTTACTGGGTGTCCCTGTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS GCA 72 bp | ACATGCACCAAGTGGAATACACCTGCAGGAGTCTTCTaGCCTTGGAAAATATCAAATTTTGTCACCAAATCT | + |
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Preference number: 6 (lower is better) Translates to: TCTKWNTPAGVF*PWKISNFVTKS Trigger: AGATTTGGTGACAAAATTTGATATTTTCCAAGGGCAGAAGACTCCTGCAGGTGTATTCCACTTGGTGCATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 72 bp | CACCAAGTGGAATACACCTGCAGGAGTCTTCTGCCCTaGGAAAATATCAAATTTTGTCACCAAATCTCCATT | + |
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Preference number: 6 (lower is better) Translates to: HQVEYTCRSLLP*ENIKFCHQISI Trigger: AATGGAGATTTGGTGACAAAATTTGATATTTTCCAAGGGCAGAAGACTCCTGCAGGTGTATTCCACTTGGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS GCA 72 bp | CTTAAGAAAACCAGAACAACTTTGGATGTACATTTCTaGATCTTCTGGACAGTCTCTTCAATCTTCCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LKKTRTTLDVHF*IFWTVSSIFPK Trigger: CTTGGGGAAGATTGAAGAGACTGTCCAGAAGATGCAGAAATGTACATCCAAAGTTGTTCTGGTTTTCTTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 90 bp | AGGATGAGCTGGAAATTAGAATTGCTTAAGAAAACCAGAACAACTTaGGATGTACATTTCTGCATCTTCTGGACAGTCTCTTCAATCTTC | + |
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Preference number: 6 (lower is better) Translates to: RMSWKLELLKKTRTT*DVHFCIFWTVSSIF Trigger: GAAGATTGAAGAGACTGTCCAGAAGATGCAGAAATGTACATCCAAAGTTGTTCTGGTTTTCTTAAGCAATTCTAATTTCCAGCTCATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 90 bp | ATATCAAATTTTGTCACCAAATCTCCATTGGCATCAAACATAATCTaGATTCCATCCAGAGTCTTGAAGTGTACCTTTTTGAGGGCATGG | + |
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Preference number: 6 (lower is better) Translates to: ISNFVTKSPLASNII*IPSRVLKCTFLRAW Trigger: CCATGCCCTCAAAAAGGTACACTTCAAGACTCTGGATGGAATCAAGATTATGTTTGATGCCAATGGAGATTTGGTGACAAAATTTGATAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 90 bp | GTCTTCTGCCCTTGGAAAATATCAAATTTTGTCACCAAATCTCCATaGGCATCAAACATAATCTTGATTCCATCCAGAGTCTTGAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: VFCPWKISNFVTKSP*ASNIILIPSRVLKC Trigger: ACACTTCAAGACTCTGGATGGAATCAAGATTATGTTTGATGCCAATGGAGATTTGGTGACAAAATTTGATATTTTCCAAGGGCAGAAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 72 bp | TTTGTCACCAAATCTCCATTGGCATCAAACATAATCTaGATTCCATCCAGAGTCTTGAAGTGTACCTTTTTG | + |
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Preference number: 6 (lower is better) Translates to: FVTKSPLASNII*IPSRVLKCTFL Trigger: CAAAAAGGTACACTTCAAGACTCTGGATGGAATCAAGATTATGTTTGATGCCAATGGAGATTTGGTGACAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 72 bp | TGGAAATTAGAATTGCTTAAGAAAACCAGAACAACTTaGGATGTACATTTCTGCATCTTCTGGACAGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: WKLELLKKTRTT*DVHFCIFWTVS Trigger: AGAGACTGTCCAGAAGATGCAGAAATGTACATCCAAAGTTGTTCTGGTTTTCTTAAGCAATTCTAATTTCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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| CDS CAA 72 bp | CCTTGGAAAATATCAAATTTTGTCACCAAATCTCCATaGGCATCAAACATAATCTTGATTCCATCCAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: PWKISNFVTKSP*ASNIILIPSRV Trigger: GACTCTGGATGGAATCAAGATTATGTTTGATGCCAATGGAGATTTGGTGACAAAATTTGATATTTTCCAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000167771.2 ENSMUST00000172743.9 ENSMUST00000232880.2 ENSMUST00000233763.2 |
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