Pregenerated sensors for VMN2R54 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000096593Ensembl transcript IDs: ENSMUST00000086210.6, ENSMUST00000233287.2
Found 162 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGTGAGCTTCCCGACATGTGTCCTGGCCACAAAACTGGTGTCCTCTaGAGGAGTAGAAAGTACTCTGAAAAACTGAGCCATCTCTCAATT | + |
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Preference number: 1 (lower is better) Translates to: CELPDMCPGHKTGVL*RSRKYSEKLSHLSI Trigger: AATTGAGAGATGGCTCAGTTTTTCAGAGTACTTTCTACTCCTCCAGAGGACACCAGTTTTGTGGCCAGGACACATGTCGGGAAGCTCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| 3UTR CCA 90 bp | GAACAAATTAGTGATGTCACTTCGCTACATCCACCATGTGGGTCCTaGGTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTTTTA | + |
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Preference number: 1 (lower is better) Translates to: EQISDVTSLHPPCGS*VSHSSCHAYWKALL Trigger: TAAAAGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACATGGTGGATGTAGCGAAGTGACATCACTAATTTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| 3UTR TCA 90 bp | ACAAAACTGGTGTCCTCTGGAGGAGTAGAAAGTACTCTGAAAAACTaGGCCATCTCTCAATTCCCACAGTCACATTTAGAACTTCATCAC | + |
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Preference number: 1 (lower is better) Translates to: TKLVSSGGVESTLKN*AISQFPQSHLELHH Trigger: GTGATGAAGTTCTAAATGTGACTGTGGGAATTGAGAGATGGCTCAGTTTTTCAGAGTACTTTCTACTCCTCCAGAGGACACCAGTTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| 3UTR TCA 90 bp | TTTTGCACACACTCAGCAACCCTTGACATTATCATCATCACCTCATaGCACTTTTCCCATCTTTGCACTGTATATATGGATGCAACAGGT | + |
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Preference number: 1 (lower is better) Translates to: FCTHSATLDIIIITS*HFSHLCTVYMDATG Trigger: ACCTGTTGCATCCATATATACAGTGCAAAGATGGGAAAAGTGTCATGAGGTGATGATGATAATGTCAAGGGTTGCTGAGTGTGTGCAAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGAGCTGCTGGATCCCTGGAGCAGGAATTACAGGTGGATGTGAGCTTCCCTTTGCACTGTATATATaGATGCAACAGGTGTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: GQSCWIPGAGITGGCELPFALYI*MQQVFC Trigger: ACAGAACACCTGTTGCATCCATATATACAGTGCAAA...GGGAAGCTCACATCCACCTGTAATTCCTGCTCCAGGGATCCAGCAGCTCTGGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| 3UTR-3UTR CCA 90 bp | ATATCAGTACTTGGGAGGGAGGCTAAGGCAGAAGCGTTACTGCAAGTTTTAAGCAAAACTGGTGTCCTCTaGAGGAGTAGAAAGTACTCT | + |
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Preference number: 2 (lower is better) Translates to: ISVLGREAKAEALLQVLSKTGVL*RSRKYS Trigger: AGAGTACTTTCTACTCCTCCAGAGGACACCAGTTTT...GCTTAAAACTTGCAGTAACGCTTCTGCCTTAGCCTCCCTCCCAAGTACTGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGAGAAATACTGTACCCTTTAGACTTCACTCCCCACCAATCTACCCTCCAAGTTGTCATGCTTACTaGAAAGCACTTTTACCCATT | + |
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Preference number: 2 (lower is better) Translates to: PERNTVPFRLHSPPIYPPSCHAY*KALLPI Trigger: AATGGGTAAAAGTGCTTTCCAGTAAGCATGACAACT...TGGAGGGTAGATTGGTGGGGAGTGAAGTCTAAAGGGTACAGTATTTCTCTCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| 3UTR-3UTR TCA 90 bp | AGAACTCAAGAAACCACTAGTCTAATCAATATCACTATGGATCTCCTTCTCCAGATCATCATCACCTCATaGCACTTTTCCCATCTTTGC | + |
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Preference number: 2 (lower is better) Translates to: RTQETTSLINITMDLLLQIIITS*HFSHLC Trigger: GCAAAGATGGGAAAAGTGTCATGAGGTGATGATGAT...CTGGAGAAGGAGATCCATAGTGATATTGATTAGACTAGTGGTTTCTTGAGTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| 3UTR-3UTR CAA 90 bp | GGCCAGAGCTGCTGGATCCCTGGAGCAGGAATTACAGGTGGATGTGAGCTTCCCACACTTTTCCCATCTTaGCACTGTATATATGGATGC | + |
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Preference number: 3 (lower is better) Translates to: GQSCWIPGAGITGGCELPTLFPS*HCIYGC Trigger: GCATCCATATATACAGTGCAAAGATGGGAAAAGTGT...GGGAAGCTCACATCCACCTGTAATTCCTGCTCCAGGGATCCAGCAGCTCTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| 3UTR CCA 72 bp | CACAGAAGTGCATATGAACACAAAGGCCAGAGCTGCTaGATCCCTGGAGCAGGAATTACAGGTGGATGTGAG | + |
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Preference number: 3 (lower is better) Translates to: HRSAYEHKGQSC*IPGAGITGGCE Trigger: CTCACATCCACCTGTAATTCCTGCTCCAGGGATCCAGCAGCTCTGGCCTTTGTGTTCATATGCACTTCTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| 3UTR CCA 72 bp | CCCGACATGTGTCCTGGCCACAAAACTGGTGTCCTCTaGAGGAGTAGAAAGTACTCTGAAAAACTGAGCCAT | + |
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Preference number: 3 (lower is better) Translates to: PDMCPGHKTGVL*RSRKYSEKLSH Trigger: ATGGCTCAGTTTTTCAGAGTACTTTCTACTCCTCCAGAGGACACCAGTTTTGTGGCCAGGACACATGTCGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| 3UTR CCA 72 bp | GGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACTaGAAAGCACTTTTACCCATTAAGCCATCTTCTAAG | + |
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Preference number: 3 (lower is better) Translates to: GSWVSHSSCHAY*KALLPIKPSSK Trigger: CTTAGAAGATGGCTTAATGGGTAAAAGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATACCCAGGACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| 3UTR TCA 72 bp | ATCTCCCTTTCACTTTTGCACACACTCAGCAACCCTTaGCATTATCATCATCACCTCATGACACTTTTCCCA | + |
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Preference number: 3 (lower is better) Translates to: ISLSLLHTLSNP*HYHHHLMTLFP Trigger: TGGGAAAAGTGTCATGAGGTGATGATGATAATGTCAAGGGTTGCTGAGTGTGTGCAAAAGTGAAAGGGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| 3UTR TCA 72 bp | GTGTCCTCTGGAGGAGTAGAAAGTACTCTGAAAAACTaGGCCATCTCTCAATTCCCACAGTCACATTTAGAA | + |
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Preference number: 3 (lower is better) Translates to: VSSGGVESTLKN*AISQFPQSHLE Trigger: TTCTAAATGTGACTGTGGGAATTGAGAGATGGCTCAGTTTTTCAGAGTACTTTCTACTCCTCCAGAGGACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| 3UTR CCA 72 bp | CCTCATGACACTTTTCCCATCTTTGCACTGTATATATaGATGCAACAGGTGTTCTGTGGTTATCAAGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: PHDTFPIFALYI*MQQVFCGYQAE Trigger: TTCTGCTTGATAACCACAGAACACCTGTTGCATCCATATATACAGTGCAAAGATGGGAAAAGTGTCATGAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR GCA 90 bp | GGCCAGAGCTGCTGGATCCCTGGAGCAGGAATTACAGGTGGATGTGAGCTTCCCAGAGAGCTGGCCTGCTaGCCAAAGTCATCATCTTGG | + |
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Preference number: 4 (lower is better) Translates to: GQSCWIPGAGITGGCELPRELAC*PKSSSW Trigger: CCAAGATGATGACTTTGGGCAGCAGGCCAGCTCTCT...GGGAAGCTCACATCCACCTGTAATTCCTGCTCCAGGGATCCAGCAGCTCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | CCAGAGAGAAATACTGTACCCTTTAGACTTCACTCCCCACCAATCTACCCTCCAGCTGGACTCAGCTGCTaGGTGGCCAGAGAGCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: PERNTVPFRLHSPPIYPPAGLSC*VARELA Trigger: GGCCAGCTCTCTGGCCACTCAGCAGCTGAGTCCAGC...TGGAGGGTAGATTGGTGGGGAGTGAAGTCTAAAGGGTACAGTATTTCTCTCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR GCA 90 bp | GGCCAGAGCTGCTGGATCCCTGGAGCAGGAATTACAGGTGGATGTGAGCTTCCCTCACCCTGTTTTTCCTaGTGTGCACAGTACCCTTGC | + |
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Preference number: 4 (lower is better) Translates to: GQSCWIPGAGITGGCELPSPCFS*CAQYPC Trigger: GCAAGGGTACTGTGCACAGCAGGAAAAACAGGGTGA...GGGAAGCTCACATCCACCTGTAATTCCTGCTCCAGGGATCCAGCAGCTCTGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | GGCCAGAGCTGCTGGATCCCTGGAGCAGGAATTACAGGTGGATGTGAGCTTCCCAGCTTTCACTGCAGATaGAGGTGGGCACAGTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: GQSCWIPGAGITGGCELPSFHCR*RWAQFP Trigger: AGGAAACTGTGCCCACCTCCATCTGCAGTGAAAGCT...GGGAAGCTCACATCCACCTGTAATTCCTGCTCCAGGGATCCAGCAGCTCTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | TCGCTACATCCACCATGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACGACTCAGCTGCTGAGTaGCCAGAGAGCTGGCCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SLHPPCGSWVSHSSCHAYDSAAE*PESWPA Trigger: AGCAGGCCAGCTCTCTGGCCACTCAGCAGCTGAGTC...GTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACATGGTGGATGTAGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | TCGCTACATCCACCATGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACGCAGAGTGCCTTTGCTaGCCCACACCTGTCCTGAGA | + |
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Preference number: 4 (lower is better) Translates to: SLHPPCGSWVSHSSCHAYAECLC*PTPVLR Trigger: TCTCAGGACAGGTGTGGGTCAGCAAAGGCACTCTGC...GTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACATGGTGGATGTAGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | TCGCTACATCCACCATGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACCCTCTTGGCACTGGATaGCAATGTGCTGGGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: SLHPPCGSWVSHSSCHAYPLGTG*QCAGAL Trigger: CAGAGCCCCAGCACATTGTCATCCAGTGCCAAGAGG...GTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACATGGTGGATGTAGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | TCGCTACATCCACCATGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACCCACATGGAGGCACTTaGAGTCTGCAGCCCAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SLHPPCGSWVSHSSCHAYPHGGT*SLQPSW Trigger: CCAACTGGGCTGCAGACTTCAAGTGCCTCCATGTGG...GTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACATGGTGGATGTAGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR GCA 90 bp | GGCCAGAGCTGCTGGATCCCTGGAGCAGGAATTACAGGTGGATGTGAGCTTCCCTTGGCTGTACATTTCTaGATCTTCTGGACAGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: GQSCWIPGAGITGGCELPLAVHF*IFWTVS Trigger: AGAGACTGTCCAGAAGATGCAGAAATGTACAGCCAA...GGGAAGCTCACATCCACCTGTAATTCCTGCTCCAGGGATCCAGCAGCTCTGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | TCGCTACATCCACCATGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACATACCACAGCAAAGGTaGTCTGACGGAGGAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: SLHPPCGSWVSHSSCHAYIPQQR*SDGGGR Trigger: CCTGCCTCCTCCGTCAGACCACCTTTGCTGTGGTAT...GTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACATGGTGGATGTAGCGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | GGCCAGAGCTGCTGGATCCCTGGAGCAGGAATTACAGGTGGATGTGAGCTTCCCAGAAAAGATGGAAACTaGATCTTGTCACTCAGACTG | + |
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Preference number: 4 (lower is better) Translates to: GQSCWIPGAGITGGCELPRKDGN*ILSLRL Trigger: CAGTCTGAGTGACAAGATTCAGTTTCCATCTTTTCT...GGGAAGCTCACATCCACCTGTAATTCCTGCTCCAGGGATCCAGCAGCTCTGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | CAAGCAGAAGTCAAAGAACAAATTAGTGATGTCACTTCGCTACATCCACCATGTGGAGGAGGCAGGTGGTaGCAGTGGGTCTCCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: QAEVKEQISDVTSLHPPCGGGRW*QWVSPG Trigger: TCCTGGGGAGACCCACTGTCACCACCTGCCTCCTCC...ACATGGTGGATGTAGCGAAGTGACATCACTAATTTGTTCTTTGACTTCTGCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR GCA 90 bp | ACCATGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTGAAGGCAGCTTTCACTaGAGATGGAGGTGGGCACAG | + |
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Preference number: 4 (lower is better) Translates to: TMWVLGITLKLSCLLESTEGSFH*RWRWAQ Trigger: CTGTGCCCACCTCCATCTGCAGTGAAAGCTGCCTTC...AGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | ATATCAGTACTTGGGAGGGAGGCTAAGGCAGAAGCGTTACTGCAAGTTTTAAGCGCTGGCATGTGTAGTTaGGGATGGGCTCCTTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: ISVLGREAKAEALLQVLSAGMCS*GWAPSA Trigger: GGCAGAAGGAGCCCATCCCCAACTACACATGCCAGC...GCTTAAAACTTGCAGTAACGCTTCTGCCTTAGCCTCCCTCCCAAGTACTGATAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | ACTTCATCACCCCAGAGAGAAATACTGTACCCTTTAGACTTCACTCCCCACCAAGAGTGGCCAGAGAGCTaGCCTGCTGCCCAAAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: TSSPQREILYPLDFTPHQEWPES*PAAQSH Trigger: ATGACTTTGGGCAGCAGGCCAGCTCTCTGGCCACTC...TTGGTGGGGAGTGAAGTCTAAAGGGTACAGTATTTCTCTCTGGGGTGATGAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | TCGCTACATCCACCATGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACACCTTTTTGAGGGCATaGAGCAGCTGCCAGGAATGG | + |
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Preference number: 4 (lower is better) Translates to: SLHPPCGSWVSHSSCHAYTFLRA*SSCQEW Trigger: CCATTCCTGGCAGCTGCTCCATGCCCTCAAAAAGGT...GTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACATGGTGGATGTAGCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | CCAGAGAGAAATACTGTACCCTTTAGACTTCACTCCCCACCAATCTACCCTCCAGCAGGCAATGGTCTCTaGTGTGGCTCGAGTACTGCT | + |
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Preference number: 4 (lower is better) Translates to: PERNTVPFRLHSPPIYPPAGNGL*CGSSTA Trigger: AGCAGTACTCGAGCCACACCAGAGACCATTGCCTGC...TGGAGGGTAGATTGGTGGGGAGTGAAGTCTAAAGGGTACAGTATTTCTCTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | ACCATGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTCTTGTCTGGGAATGGTaGAGAGGTGGCCAACCACAC | + |
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Preference number: 4 (lower is better) Translates to: TMWVLGITLKLSCLLESTLVWEW*RGGQPH Trigger: GTGTGGTTGGCCACCTCTCCACCATTCCCAGACAAG...AGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | GGCCACAAAACTGGTGTCCTCTGGAGGAGTAGAAAGTACTCTGAAAAACTGAGCGAACCCTCTTGGCACTaGATGACAATGTGCTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GHKTGVLWRSRKYSEKLSEPSWH*MTMCWG Trigger: GCCCCAGCACATTGTCATCCAGTGCCAAGAGGGTTC...GCTCAGTTTTTCAGAGTACTTTCTACTCCTCCAGAGGACACCAGTTTTGTGGCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | CTTTGCACTGTATATATGGATGCAACAGGTGTTCTGTGGTTATCAAGCAGAAGTTGGCTGGGGCGCAGGTaGGCAAGGAACTCAGGGAAG | + |
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Preference number: 4 (lower is better) Translates to: LCTVYMDATGVLWLSSRSWLGRR*ARNSGK Trigger: CTTCCCTGAGTTCCTTGCTCACCTGCGCCCCAGCCA...ACTTCTGCTTGATAACCACAGAACACCTGTTGCATCCATATATACAGTGCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR GCA 90 bp | TCGCTACATCCACCATGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACAGGCCAAATGTGCCTTaGAACACCTGGGAAATGCCT | + |
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Preference number: 4 (lower is better) Translates to: SLHPPCGSWVSHSSCHAYRPNVP*NTWEMP Trigger: AGGCATTTCCCAGGTGTTGCAAGGCACATTTGGCCT...GTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACATGGTGGATGTAGCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | CTTTGCACTGTATATATGGATGCAACAGGTGTTCTGTGGTTATCAAGCAGAAGTCTTCTGGGGTCTGGCTaGGGCGCAGGTGAGCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LCTVYMDATGVLWLSSRSLLGSG*GAGEQG Trigger: TCCTTGCTCACCTGCGCCCCAGCCAGACCCCAGAAG...ACTTCTGCTTGATAACCACAGAACACCTGTTGCATCCATATATACAGTGCAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | CCAGAGAGAAATACTGTACCCTTTAGACTTCACTCCCCACCAATCTACCCTCCATACCTGGCTGAACCCTaGAAGGCAGCTTTCACTGCA | + |
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Preference number: 4 (lower is better) Translates to: PERNTVPFRLHSPPIYPPYLAEP*KAAFTA Trigger: TGCAGTGAAAGCTGCCTTCCAGGGTTCAGCCAGGTA...TGGAGGGTAGATTGGTGGGGAGTGAAGTCTAAAGGGTACAGTATTTCTCTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | CCAGAGAGAAATACTGTACCCTTTAGACTTCACTCCCCACCAATCTACCCTCCAATCCTTGTCTGGGAATaGTGGAGAGGTGGCCAACCA | + |
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Preference number: 4 (lower is better) Translates to: PERNTVPFRLHSPPIYPPILVWE*WRGGQP Trigger: TGGTTGGCCACCTCTCCACCATTCCCAGACAAGGAT...TGGAGGGTAGATTGGTGGGGAGTGAAGTCTAAAGGGTACAGTATTTCTCTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | ATATCAGTACTTGGGAGGGAGGCTAAGGCAGAAGCGTTACTGCAAGTTTTAAGCGCACACAGAAGAAGGTaGCACCAGAACCCTCTTGGC | + |
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Preference number: 4 (lower is better) Translates to: ISVLGREAKAEALLQVLSAHRRR*HQNPLG Trigger: GCCAAGAGGGTTCTGGTGCCACCTTCTTCTGTGTGC...GCTTAAAACTTGCAGTAACGCTTCTGCCTTAGCCTCCCTCCCAAGTACTGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | TCGCTACATCCACCATGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACCATCTTGGGCAAGAATaGTCACCCAGGACCATTGAA | + |
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Preference number: 4 (lower is better) Translates to: SLHPPCGSWVSHSSCHAYHLGQE*SPRTIE Trigger: TTCAATGGTCCTGGGTGATCATTCTTGCCCAAGATG...GTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACATGGTGGATGTAGCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | TGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTTTTATTCTGTTGTTGGCCCTaGCCACAGGTGTATCCCGGT | + |
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Preference number: 4 (lower is better) Translates to: CGSWVSHSSCHAYWKALLFCCWP*PQVYPG Trigger: ACCGGGATACACCTGTGGTCAGGGCCAACAACAGAA...TAAAAGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | CAAGCAGAAGTCAAAGAACAAATTAGTGATGTCACTTCGCTACATCCACCATGTACAGCAAAGGTGGTCTaGCGGAGGAGGCAGGTGGTG | + |
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Preference number: 4 (lower is better) Translates to: QAEVKEQISDVTSLHPPCTAKVV*RRRQVV Trigger: CACCACCTGCCTCCTCCGTCAGACCACCTTTGCTGT...ACATGGTGGATGTAGCGAAGTGACATCACTAATTTGTTCTTTGACTTCTGCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR GCA 90 bp | TGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTTTTAGGGATGGGCTCCTTCTaGCCTGTGAGAAAGCCCATT | + |
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Preference number: 4 (lower is better) Translates to: CGSWVSHSSCHAYWKALLGMGSF*PVRKPI Trigger: AATGGGCTTTCTCACAGGGCAGAAGGAGCCCATCCC...TAAAAGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR GCA 90 bp | ACCATGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTTATGGTCAGGGCAAGTaGCATGTGCAGAGTGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: TMWVLGITLKLSCLLESTYGQGK*HVQSAF Trigger: AAAGGCACTCTGCACATGGCACTTGCCCTGACCATA...AGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACATGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR GCA 90 bp | CCAGAGAGAAATACTGTACCCTTTAGACTTCACTCCCCACCAATCTACCCTCCACCTTTCCTCTCCTGGTaGTCACAGGCTAGCATATTG | + |
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Preference number: 4 (lower is better) Translates to: PERNTVPFRLHSPPIYPPPFLSW*SQASIL Trigger: CAATATGCTAGCCTGTGAGCACCAGGAGAGGAAAGG...TGGAGGGTAGATTGGTGGGGAGTGAAGTCTAAAGGGTACAGTATTTCTCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | TGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTTTTACCAGAAGTCTGGCCATaGAGACAGACAGGGAAGACC | + |
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Preference number: 4 (lower is better) Translates to: CGSWVSHSSCHAYWKALLPEVWP*RQTGKT Trigger: GGTCTTCCCTGTCTGTCTCCATGGCCAGACTTCTGG...TAAAAGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | AGAGAAATACTGTACCCTTTAGACTTCACTCCCCACCAATCTACCCTCCAGAGACAATGGTCTCTGGTGTaGCTCGAGTACTGCTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: REILYPLDFTPHQSTLQRQWSLV*LEYCSL Trigger: CAAGGAGCAGTACTCGAGCCACACCAGAGACCATTG...TCTCTGGAGGGTAGATTGGTGGGGAGTGAAGTCTAAAGGGTACAGTATTTCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | CTTTGCACTGTATATATGGATGCAACAGGTGTTCTGTGGTTATCAAGCAGAAGTGTCCTGGGCAGGCAATaGTCTCTGGTGTGGCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCTVYMDATGVLWLSSRSVLGRQ*SLVWLE Trigger: CTCGAGCCACACCAGAGACCATTGCCTGCCCAGGAC...ACTTCTGCTTGATAACCACAGAACACCTGTTGCATCCATATATACAGTGCAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | ACCATGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTCAGTGGAGGCCAGGATaGAAAAGATCTCTACAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TMWVLGITLKLSCLLESTQWRPG*KRSLQP Trigger: TGGCTGTAGAGATCTTTTCCATCCTGGCCTCCACTG...AGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | AGAACTCAAGAAACCACTAGTCTAATCAATATCACTATGGATCTCCTTCTCCAGCCAACCAAGGCAGCCTaGGGAGAGCCATGCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTQETTSLINITMDLLLQPTKAA*GEPCWH Trigger: ATGCCAGCATGGCTCTCCTCAGGCTGCCTTGGTTGG...CTGGAGAAGGAGATCCATAGTGATATTGATTAGACTAGTGGTTTCTTGAGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | AGAGAAATACTGTACCCTTTAGACTTCACTCCCCACCAATCTACCCTCCAGAGAAATGTGCTGGGGCTCTaGGATCATATCCTTGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: REILYPLDFTPHQSTLQRNVLGL*DHILVW Trigger: CCAGACAAGGATATGATCTCAGAGCCCCAGCACATT...TCTCTGGAGGGTAGATTGGTGGGGAGTGAAGTCTAAAGGGTACAGTATTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR GCA 90 bp | TGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTTTTAGCAACACCTGGGAAATaGCTGGTATGGTCAGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CGSWVSHSSCHAYWKALLATPGK*LVWSGQ Trigger: TTGCCCTGACCATACCAGGCATTTCCCAGGTGTTGC...TAAAAGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR GCA 90 bp | AGAGAAATACTGTACCCTTTAGACTTCACTCCCCACCAATCTACCCTCCAGAGACAAGTGGAATACACCTaGAGGAGTCTTCTGCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: REILYPLDFTPHQSTLQRQVEYT*RSLLPL Trigger: CAAGGGCAGAAGACTCCTGCAGGTGTATTCCACTTG...TCTCTGGAGGGTAGATTGGTGGGGAGTGAAGTCTAAAGGGTACAGTATTTCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR GCA 90 bp | GGCCACAAAACTGGTGTCCTCTGGAGGAGTAGAAAGTACTCTGAAAAACTGAGCGGGCACAGTTTCCTCTaGATTCAGGGAACTTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: GHKTGVLWRSRKYSEKLSGHSFL*IQGTYL Trigger: CAAGTAAGTTCCCTGAATGCAGAGGAAACTGTGCCC...GCTCAGTTTTTCAGAGTACTTTCTACTCCTCCAGAGGACACCAGTTTTGTGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | ATATCAGTACTTGGGAGGGAGGCTAAGGCAGAAGCGTTACTGCAAGTTTTAAGCGTACCTTTCCTCTCCTaGTGCTCACAGGCTAGCATA | + |
|
Preference number: 4 (lower is better) Translates to: ISVLGREAKAEALLQVLSVPFLS*CSQASI Trigger: TATGCTAGCCTGTGAGCACCAGGAGAGGAAAGGTAC...GCTTAAAACTTGCAGTAACGCTTCTGCCTTAGCCTCCCTCCCAAGTACTGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | TGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTTTTAGCACCAGAACCCTCTTaGCACTGGATGACAATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CGSWVSHSSCHAYWKALLAPEPS*HWMTMC Trigger: GCACATTGTCATCCAGTGCCAAGAGGGTTCTGGTGC...TAAAAGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | ATATCAGTACTTGGGAGGGAGGCTAAGGCAGAAGCGTTACTGCAAGTTTTAAGCATGAGGGCTCTGTCTTaGCAATATCCAGGCTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISVLGREAKAEALLQVLSMRALS*QYPGSW Trigger: CCAAGAGCCTGGATATTGCCAAGACAGAGCCCTCAT...GCTTAAAACTTGCAGTAACGCTTCTGCCTTAGCCTCCCTCCCAAGTACTGATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
||
| CDS-3UTR TCA 90 bp | ACATTATCATCATCACCTCATGACACTTTTCCCATCTTTGCACTGTATATATGGGTCGGGGTACCTGGCTaGACCCTGGAAGGCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSPHDTFPIFALYIWVGVPG*TLEGSF Trigger: AAAGCTGCCTTCCAGGGTTCAGCCAGGTACCCCGAC...CCATATATACAGTGCAAAGATGGGAAAAGTGTCATGAGGTGATGATGATAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | ACTTCATCACCCCAGAGAGAAATACTGTACCCTTTAGACTTCACTCCCCACCAAGTACCATCAGAGAAGTaGAAGATGGAGAAGCTACCC | + |
|
Preference number: 4 (lower is better) Translates to: TSSPQREILYPLDFTPHQVPSEK*KMEKLP Trigger: GGGTAGCTTCTCCATCTTTCACTTCTCTGATGGTAC...TTGGTGGGGAGTGAAGTCTAAAGGGTACAGTATTTCTCTCTGGGGTGATGAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR GCA 90 bp | CTTTGCACTGTATATATGGATGCAACAGGTGTTCTGTGGTTATCAAGCAGAAGTGTGTGGCTCGAGTACTaGTCCTTGGGGCACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LCTVYMDATGVLWLSSRSVWLEY*SLGHRR Trigger: TCTTCTGTGCCCCAAGGAGCAGTACTCGAGCCACAC...ACTTCTGCTTGATAACCACAGAACACCTGTTGCATCCATATATACAGTGCAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | GTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTTTTACCCATTAAGCCAGGAAGATCTCTGTCCTaGGCAGGCAATGGTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSHSSCHAYWKALLPIKPGRSLS*AGNGLW Trigger: CCAGAGACCATTGCCTGCCCAGGACAGAGATCTTCC...TGGCTTAATGGGTAAAAGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | AGAACTCAAGAAACCACTAGTCTAATCAATATCACTATGGATCTCCTTCTCCAGTTTCCCCGGGCACTGTaGTACAGGGGAAGGAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RTQETTSLINITMDLLLQFPRAL*YRGRKA Trigger: AGCCTTCCTTCCCCTGTACCACAGTGCCCGGGGAAA...CTGGAGAAGGAGATCCATAGTGATATTGATTAGACTAGTGGTTTCTTGAGTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | CTTTGCACTGTATATATGGATGCAACAGGTGTTCTGTGGTTATCAAGCAGAAGTGCTCCTTCTGCCCTGTaGGAAAGCCCATTGTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LCTVYMDATGVLWLSSRSAPSAL*ESPLSH Trigger: ATGAGACAATGGGCTTTCTCACAGGGCAGAAGGAGC...ACTTCTGCTTGATAACCACAGAACACCTGTTGCATCCATATATACAGTGCAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | GGCCACAAAACTGGTGTCCTCTGGAGGAGTAGAAAGTACTCTGAAAAACTGAGCCAGGAATGGAAGTTGTaGGAATTTGTACCTTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GHKTGVLWRSRKYSEKLSQEWKL*EFVPFL Trigger: GAGGAAAGGTACAAATTCTCACAACTTCCATTCCTG...GCTCAGTTTTTCAGAGTACTTTCTACTCCTCCAGAGGACACCAGTTTTGTGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR GCA 90 bp | AGAACTCAAGAAACCACTAGTCTAATCAATATCACTATGGATCTCCTTCTCCAGCACCCTCTGTCACTGTaGTGTTCTGGTAGGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RTQETTSLINITMDLLLQHPLSL*CSGRAM Trigger: CATGGCCCTACCAGAACAGCACAGTGACAGAGGGTG...CTGGAGAAGGAGATCCATAGTGATATTGATTAGACTAGTGGTTTCTTGAGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | AGAACTCAAGAAACCACTAGTCTAATCAATATCACTATGGATCTCCTTCTCCAGACAGTCCCAGAAGTCTaGCCATGGAGACAGACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RTQETTSLINITMDLLLQTVPEV*PWRQTG Trigger: CCCTGTCTGTCTCCATGGCCAGACTTCTGGGACTGT...CTGGAGAAGGAGATCCATAGTGATATTGATTAGACTAGTGGTTTCTTGAGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | CAAGCAGAAGTCAAAGAACAAATTAGTGATGTCACTTCGCTACATCCACCATGTTATAAACATGTCTTCTaGGGTCTGGCTGGGGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QAEVKEQISDVTSLHPPCYKHVF*GLAGAQ Trigger: CTGCGCCCCAGCCAGACCCCAGAAGACATGTTTATA...ACATGGTGGATGTAGCGAAGTGACATCACTAATTTGTTCTTTGACTTCTGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | ACCATGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTCTCTTCATGTCTCTTTaGTCTGTAAACTGTCCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TMWVLGITLKLSCLLESTLFMSL*SVNCPS Trigger: TGAGGGACAGTTTACAGACCAAAGAGACATGAAGAG...AGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACATGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | ATATCAGTACTTGGGAGGGAGGCTAAGGCAGAAGCGTTACTGCAAGTTTTAAGCAAATTGGGCAACAAGTaGGCACTCCTATTAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISVLGREAKAEALLQVLSKLGNK*ALLLIS Trigger: GGAGATTAATAGGAGTGCTCACTTGTTGCCCAATTT...GCTTAAAACTTGCAGTAACGCTTCTGCCTTAGCCTCCCTCCCAAGTACTGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | CAAGCAGAAGTCAAAGAACAAATTAGTGATGTCACTTCGCTACATCCACCATGTATAGCCCTGCTGCTGTaGTACAGAAGGCCAAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: QAEVKEQISDVTSLHPPCIALLL*YRRPNV Trigger: CACATTTGGCCTTCTGTATCACAGCAGCAGGGCTAT...ACATGGTGGATGTAGCGAAGTGACATCACTAATTTGTTCTTTGACTTCTGCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | AGAACTCAAGAAACCACTAGTCTAATCAATATCACTATGGATCTCCTTCTCCAGAGGAGACAGCCACTGTaGATACCACAGCAAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RTQETTSLINITMDLLLQRRQPL*IPQQRW Trigger: CCACCTTTGCTGTGGTATTCACAGTGGCTGTCTCCT...CTGGAGAAGGAGATCCATAGTGATATTGATTAGACTAGTGGTTTCTTGAGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | ACATTATCATCATCACCTCATGACACTTTTCCCATCTTTGCACTGTATATATGGAGGCCAGGACTACTGTaGGAGTCTTGGCCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSPHDTFPIFALYIWRPGLL*ESWPEQ Trigger: CTGTTCTGGCCAAGACTCTCACAGTAGTCCTGGCCT...CCATATATACAGTGCAAAGATGGGAAAAGTGTCATGAGGTGATGATGATAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | CTTTGCACTGTATATATGGATGCAACAGGTGTTCTGTGGTTATCAAGCAGAAGTGGAACTTGGTCTCATTaGAGATATCTGGAAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCTVYMDATGVLWLSSRSGTWSH*RYLEGP Trigger: GGGGCCTTCCAGATATCTTCAATGAGACCAAGTTCC...ACTTCTGCTTGATAACCACAGAACACCTGTTGCATCCATATATACAGTGCAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR GCA 90 bp | ATATCAGTACTTGGGAGGGAGGCTAAGGCAGAAGCGTTACTGCAAGTTTTAAGCCCTGCAGGAGTCTTCTaGCCTTGGAAAATATCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ISVLGREAKAEALLQVLSPAGVF*PWKISN Trigger: ATTTGATATTTTCCAAGGGCAGAAGACTCCTGCAGG...GCTTAAAACTTGCAGTAACGCTTCTGCCTTAGCCTCCCTCCCAAGTACTGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | GGCCACAAAACTGGTGTCCTCTGGAGGAGTAGAAAGTACTCTGAAAAACTGAGCGGTCCGAAGAAAAGATaGAAACTGAATCTTGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: GHKTGVLWRSRKYSEKLSGPKKR*KLNLVT Trigger: AGTGACAAGATTCAGTTTCCATCTTTTCTTCGGACC...GCTCAGTTTTTCAGAGTACTTTCTACTCCTCCAGAGGACACCAGTTTTGTGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | AGAGAAATACTGTACCCTTTAGACTTCACTCCCCACCAATCTACCCTCCAGAGAAGCTGGGTAACTGCATaGGAAGATGTAATGTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: REILYPLDFTPHQSTLQRSWVTA*EDVMSL Trigger: TAGTGACATTACATCTTCCCATGCAGTTACCCAGCT...TCTCTGGAGGGTAGATTGGTGGGGAGTGAAGTCTAAAGGGTACAGTATTTCTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | GTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTTTTACCCATTAAGCCAGATCATATCCTTGTCTaGGAATGGTGGAGAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSHSSCHAYWKALLPIKPDHILV*EWWRGG Trigger: GCCACCTCTCCACCATTCCCAGACAAGGATATGATC...TGGCTTAATGGGTAAAAGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | TGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTTTTACAGAGAAGTGAAAGATaGAGAAGCTACCCCCAACAA | + |
|
Preference number: 4 (lower is better) Translates to: CGSWVSHSSCHAYWKALLQRSER*RSYPQQ Trigger: TTGTTGGGGGTAGCTTCTCCATCTTTCACTTCTCTG...TAAAAGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR GCA 90 bp | AGAACTCAAGAAACCACTAGTCTAATCAATATCACTATGGATCTCCTTCTCCAGGACTCTCATTTCCTGTaGAGAACTGGACACCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTQETTSLINITMDLLLQDSHFL*RTGHPL Trigger: CAGAGGGTGTCCAGTTCTGCACAGGAAATGAGAGTC...CTGGAGAAGGAGATCCATAGTGATATTGATTAGACTAGTGGTTTCTTGAGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | CTTTGCACTGTATATATGGATGCAACAGGTGTTCTGTGGTTATCAAGCAGAAGTCAATACGAATCCCAGTaGTTCCTCAAAGGCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LCTVYMDATGVLWLSSRSQYESQ*FLKGQE Trigger: TTCCTGGCCTTTGAGGAACCACTGGGATTCGTATTG...ACTTCTGCTTGATAACCACAGAACACCTGTTGCATCCATATATACAGTGCAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | TGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTTTTACATTTCTGCATCTTCTaGACAGTCTCTTCAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CGSWVSHSSCHAYWKALLHFCIF*TVSSIF Trigger: GAAGATTGAAGAGACTGTCCAGAAGATGCAGAAATG...TAAAAGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | GGCCACAAAACTGGTGTCCTCTGGAGGAGTAGAAAGTACTCTGAAAAACTGAGCAATTTTACTCACTTCTaGAAATGGATGTGGCTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GHKTGVLWRSRKYSEKLSNFTHF*KWMWLV Trigger: AACAAGCCACATCCATTTCCAGAAGTGAGTAAAATT...GCTCAGTTTTTCAGAGTACTTTCTACTCCTCCAGAGGACACCAGTTTTGTGGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | AGAGAAATACTGTACCCTTTAGACTTCACTCCCCACCAATCTACCCTCCAGAGAGGAGTCTTCTGCCCTTaGAAAATATCAAATTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: REILYPLDFTPHQSTLQRGVFCP*KISNFV Trigger: GACAAAATTTGATATTTTCCAAGGGCAGAAGACTCC...TCTCTGGAGGGTAGATTGGTGGGGAGTGAAGTCTAAAGGGTACAGTATTTCTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | ACATTATCATCATCACCTCATGACACTTTTCCCATCTTTGCACTGTATATATGGCCTACATGCACCAAGTaGAATACACCTGCAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSPHDTFPIFALYIWPTCTK*NTPAGV Trigger: GACTCCTGCAGGTGTATTCCACTTGGTGCATGTAGG...CCATATATACAGTGCAAAGATGGGAAAAGTGTCATGAGGTGATGATGATAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR TCA 90 bp | CAAGCAGAAGTCAAAGAACAAATTAGTGATGTCACTTCGCTACATCCACCATGTGTATTAAGGAAGCAATaGGGACCACAAAGGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QAEVKEQISDVTSLHPPCVLRKQ*GPQRLK Trigger: CTTCAACCTTTGTGGTCCTCATTGCTTCCTTAATAC...ACATGGTGGATGTAGCGAAGTGACATCACTAATTTGTTCTTTGACTTCTGCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR GCA 90 bp | CAAGCAGAAGTCAAAGAACAAATTAGTGATGTCACTTCGCTACATCCACCATGTTATCAGCTGGGTAACTaGATGGGAAGATGTAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: QAEVKEQISDVTSLHPPCYQLGN*MGRCNV Trigger: GACATTACATCTTCCCATGCAGTTACCCAGCTGATA...ACATGGTGGATGTAGCGAAGTGACATCACTAATTTGTTCTTTGACTTCTGCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTTTTACCACGTAGGATGAGCTaGAAATTTAAATTGCTTAAG | + |
|
Preference number: 4 (lower is better) Translates to: CGSWVSHSSCHAYWKALLPRRMS*KFKLLK Trigger: CTTAAGCAATTTAAATTTCCAGCTCATCCTACGTGG...TAAAAGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
||
| CDS-3UTR CCA 90 bp | ACATTATCATCATCACCTCATGACACTTTTCCCATCTTTGCACTGTATATATGGTGGATGACAATGTGCTaGGGCTCTGAGATCATATCC | + |
|
Preference number: 4 (lower is better) Translates to: TLSSSPHDTFPIFALYIWWMTMC*GSEIIS Trigger: GGATATGATCTCAGAGCCCCAGCACATTGTCATCCA...CCATATATACAGTGCAAAGATGGGAAAAGTGTCATGAGGTGATGATGATAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
||
| CDS-3UTR CCA 90 bp | TGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTTTTAAATTTATACCTTCTCTaGAGCATCTCACCCTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: CGSWVSHSSCHAYWKALLNLYLL*SISPCF Trigger: AAAACAGGGTGAGATGCTCCAGAGAAGGTATAAATT...TAAAAGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
||
| CDS-3UTR GCA 90 bp | AGAACTCAAGAAACCACTAGTCTAATCAATATCACTATGGATCTCCTTCTCCAGTCTATCATGCCTACATaGACCAAGTGGAATACACCT | + |
|
Preference number: 4 (lower is better) Translates to: RTQETTSLINITMDLLLQSIMPT*TKWNTP Trigger: AGGTGTATTCCACTTGGTGCATGTAGGCATGATAGA...CTGGAGAAGGAGATCCATAGTGATATTGATTAGACTAGTGGTTTCTTGAGTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | AGAACTCAAGAAACCACTAGTCTAATCAATATCACTATGGATCTCCTTCTCCAGTTCTGGAAATGGATGTaGCTTGTTTTTCAGACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTQETTSLINITMDLLLQFWKWM*LVFQTL Trigger: GAGAGTCTGAAAAACAAGCCACATCCATTTCCAGAA...CTGGAGAAGGAGATCCATAGTGATATTGATTAGACTAGTGGTTTCTTGAGTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CCA 90 bp | AGAACTCAAGAAACCACTAGTCTAATCAATATCACTATGGATCTCCTTCTCCAGACTCACTTCTGGAAATaGATGTGGCTTGTTTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTQETTSLINITMDLLLQTHFWK*MWLVFQ Trigger: CTGAAAAACAAGCCACATCCATTTCCAGAAGTGAGT...CTGGAGAAGGAGATCCATAGTGATATTGATTAGACTAGTGGTTTCTTGAGTTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS TCA 90 bp | TGCCTGGTATGGTCAGGGCAAGTGCCATGTGCAGAGTGCCTTTGCTaGCCCACACCTGTCCTGAGACAGGGACACCCAGTAAACCACGTA | + |
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Preference number: 5 (lower is better) Translates to: CLVWSGQVPCAECLC*PTPVLRQGHPVNHV Trigger: TACGTGGTTTACTGGGTGTCCCTGTCTCAGGACAGGTGTGGGTCAGCAAAGGCACTCTGCACATGGCACTTGCCCTGACCATACCAGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS TCA 90 bp | AGCCATGCTGGCATGTGTAGTTGGGGATGGGCTCCTTCTGCCCTGTaGGAAAGCCCATTGTCTCATAGAGGGCTCCATGCACTGAGTCTC | + |
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Preference number: 5 (lower is better) Translates to: SHAGMCSWGWAPSAL*ESPLSHRGLHALSL Trigger: GAGACTCAGTGCATGGAGCCCTCTATGAGACAATGGGCTTTCTCACAGGGCAGAAGGAGCCCATCCCCAACTACACATGCCAGCATGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS TCA 90 bp | GGCACCAGAACCCTCTTGGCACTGGATGACAATGTGCTGGGGCTCTaGGATCATATCCTTGTCTGGGAATGGTGGAGAGGTGGCCAACCA | + |
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Preference number: 5 (lower is better) Translates to: GTRTLLALDDNVLGL*DHILVWEWWRGGQP Trigger: TGGTTGGCCACCTCTCCACCATTCCCAGACAAGGATATGATCTCAGAGCCCCAGCACATTGTCATCCAGTGCCAAGAGGGTTCTGGTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS GCA 90 bp | TCTTCCCCAAGGACTGATAGGAAGGGACGTGAAGGTGATACTCAATaGAAACCCCAGCTGGACTCAGCTGCTGAGTGGCCAGAGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: SSPRTDRKGREGDTQ*KPQLDSAAEWPESW Trigger: CCAGCTCTCTGGCCACTCAGCAGCTGAGTCCAGCTGGGGTTTGCATTGAGTATCACCTTCACGTCCCTTCCTATCAGTCCTTGGGGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CCA 90 bp | GAAGGTGATACTCAATGCAAACCCCAGCTGGACTCAGCTGCTGAGTaGCCAGAGAGCTGGCCTGCTGCCCAAAGTCATCATCTTGGGCAA | + |
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Preference number: 5 (lower is better) Translates to: EGDTQCKPQLDSAAE*PESWPAAQSHHLGQ Trigger: TTGCCCAAGATGATGACTTTGGGCAGCAGGCCAGCTCTCTGGCCACTCAGCAGCTGAGTCCAGCTGGGGTTTGCATTGAGTATCACCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CCA 90 bp | CAGACCAGCCAGCAAGAGTGCTACCAAAGCCAATACGAATCCCAGTaGTTCCTCAAAGGCCAGGAAGATCTCTGTCCTGGGCAGGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: QTSQQECYQSQYESQ*FLKGQEDLCPGQAM Trigger: CATTGCCTGCCCAGGACAGAGATCTTCCTGGCCTTTGAGGAACCACTGGGATTCGTATTGGCTTTGGTAGCACTCTTGCTGGCTGGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | GGCCAGAGCTGCTGGATCCCTGGAGCAGGAATTACAGGTGGATGTGAGCTTCCCCCCAAAGTCATCATCTaGGGCAAGAATGATCACCCA | + |
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Preference number: 5 (lower is better) Translates to: GQSCWIPGAGITGGCELPPKVII*GKNDHP Trigger: TGGGTGATCATTCTTGCCCAAGATGATGACTTTGGG...GGGAAGCTCACATCCACCTGTAATTCCTGCTCCAGGGATCCAGCAGCTCTGGCC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS TCA 90 bp | CCAGCACACAGAAGAAGGTGGCACCAGAACCCTCTTGGCACTGGATaGCAATGTGCTGGGGCTCTGAGATCATATCCTTGTCTGGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: PAHRRRWHQNPLGTG*QCAGALRSYPCLGM Trigger: CATTCCCAGACAAGGATATGATCTCAGAGCCCCAGCACATTGTCATCCAGTGCCAAGAGGGTTCTGGTGCCACCTTCTTCTGTGTGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS TCA 90 bp | CCCACATGGAGGCACTTGAAGTCTGCAGCCCAGTTGGTGGGGCAGTaGAATCAGAGGGTGTACCATCAGAGAAGTGAAAGATGGAGAAGC | + |
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Preference number: 5 (lower is better) Translates to: PTWRHLKSAAQLVGQ*NQRVYHQRSERWRS Trigger: GCTTCTCCATCTTTCACTTCTCTGATGGTACACCCTCTGATTTCACTGCCCCACCAACTGGGCTGCAGACTTCAAGTGCCTCCATGTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS GCA 90 bp | CAGAAGAAGGTGGCACCAGAACCCTCTTGGCACTGGATGACAATGTaGTGGGGCTCTGAGATCATATCCTTGTCTGGGAATGGTGGAGAG | + |
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Preference number: 5 (lower is better) Translates to: QKKVAPEPSWHWMTM*WGSEIISLSGNGGE Trigger: CTCTCCACCATTCCCAGACAAGGATATGATCTCAGAGCCCCAGCACATTGTCATCCAGTGCCAAGAGGGTTCTGGTGCCACCTTCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CCA 90 bp | GTGATACAGAAGGCCAAATGTGCCTTGCAACACCTGGGAAATGCCTaGTATGGTCAGGGCAAGTGCCATGTGCAGAGTGCCTTTGCTGAC | + |
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Preference number: 5 (lower is better) Translates to: VIQKAKCALQHLGNA*YGQGKCHVQSAFAD Trigger: GTCAGCAAAGGCACTCTGCACATGGCACTTGCCCTGACCATACCAGGCATTTCCCAGGTGTTGCAAGGCACATTTGGCCTTCTGTATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CCA 90 bp | AAGAAGGTGGCACCAGAACCCTCTTGGCACTGGATGACAATGTGCTaGGGCTCTGAGATCATATCCTTGTCTGGGAATGGTGGAGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: KKVAPEPSWHWMTMC*GSEIISLSGNGGEV Trigger: CACCTCTCCACCATTCCCAGACAAGGATATGATCTCAGAGCCCCAGCACATTGTCATCCAGTGCCAAGAGGGTTCTGGTGCCACCTTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | GGCCAGAGCTGCTGGATCCCTGGAGCAGGAATTACAGGTGGATGTGAGCTTCCCGATCACCCAGGACCATaGAAAGTGAATTATCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GQSCWIPGAGITGGCELPDHPGP*KVNYQL Trigger: CAGCTGATAATTCACTTTCAATGGTCCTGGGTGATC...GGGAAGCTCACATCCACCTGTAATTCCTGCTCCAGGGATCCAGCAGCTCTGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS CCA 90 bp | GCAATGAGGACCACAAAGGTTGAAGTACCAGGGCTCAGGCATATCTaGATCCTACTTCGTGGTCTGGTGACTCTGAAGGCCAGGACTACT | + |
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Preference number: 5 (lower is better) Translates to: AMRTTKVEVPGLRHI*ILLRGLVTLKARTT Trigger: AGTAGTCCTGGCCTTCAGAGTCACCAGACCACGAAGTAGGATCCAGATATGCCTGAGCCCTGGTACTTCAACCTTTGTGGTCCTCATTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS GCA 90 bp | CTCTGGAGCATCTCACCCTGTTTTTCCTGCTGTGCACAGTACCCTTaGTTTAGCCAGGCAGGAGTGTTCTTCTCAGGTTTCAGCAAGATG | + |
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Preference number: 5 (lower is better) Translates to: LWSISPCFSCCAQYP*FSQAGVFFSGFSKM Trigger: CATCTTGCTGAAACCTGAGAAGAACACTCCTGCCTGGCTAAAGCAAGGGTACTGTGCACAGCAGGAAAAACAGGGTGAGATGCTCCAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS GCA 90 bp | TGGAAGGCAGCTTTCACTGCAGATGGAGGTGGGCACAGTTTCCTCTaGATTCAGGGAACTTACTTGGAGATCCTCCTTCAACTGAACCAT | + |
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Preference number: 5 (lower is better) Translates to: WKAAFTADGGGHSFL*IQGTYLEILLQLNH Trigger: ATGGTTCAGTTGAAGGAGGATCTCCAAGTAAGTTCCCTGAATGCAGAGGAAACTGTGCCCACCTCCATCTGCAGTGAAAGCTGCCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | ACTTCATCACCCCAGAGAGAAATACTGTACCCTTTAGACTTCACTCCCCACCAAGGCACCAGAACCCTCTaGGCACTGGATGACAATGTG | + |
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Preference number: 5 (lower is better) Translates to: TSSPQREILYPLDFTPHQGTRTL*ALDDNV Trigger: CACATTGTCATCCAGTGCCAAGAGGGTTCTGGTGCC...TTGGTGGGGAGTGAAGTCTAAAGGGTACAGTATTTCTCTCTGGGGTGATGAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS CCA 90 bp | GAGTACTGCTCCTTGGGGCACAGAAGACATCTCTTCATGTCTCTTTaGTCTGTAAACTGTCCCTCAGGGCATGGACTGCAATCAAAACAG | + |
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Preference number: 5 (lower is better) Translates to: EYCSLGHRRHLFMSL*SVNCPSGHGLQSKQ Trigger: CTGTTTTGATTGCAGTCCATGCCCTGAGGGACAGTTTACAGACCAAAGAGACATGAAGAGATGTCTTCTGTGCCCCAAGGAGCAGTACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | ATATCAGTACTTGGGAGGGAGGCTAAGGCAGAAGCGTTACTGCAAGTTTTAAGCCTGACCTGGGGAAACTaGTACAGTCCCAGAAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: ISVLGREAKAEALLQVLSLTWGN*YSPRSL Trigger: CAGACTTCTGGGACTGTACAAGTTTCCCCAGGTCAG...GCTTAAAACTTGCAGTAACGCTTCTGCCTTAGCCTCCCTCCCAAGTACTGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | CCAGAGAGAAATACTGTACCCTTTAGACTTCACTCCCCACCAATCTACCCTCCAGTTCCCAGAAGAGACTaGAGGGTCTATCATGCCTAC | + |
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Preference number: 5 (lower is better) Translates to: PERNTVPFRLHSPPIYPPVPRRD*RVYHAY Trigger: GTAGGCATGATAGACCCTCAAGTCTCTTCTGGGAAC...TGGAGGGTAGATTGGTGGGGAGTGAAGTCTAAAGGGTACAGTATTTCTCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | TCGCTACATCCACCATGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACGGAAGTTGTGAGAATTaGTACCTTTCCTCTCCTGGT | + |
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Preference number: 5 (lower is better) Translates to: SLHPPCGSWVSHSSCHAYGSCEN*YLSSPG Trigger: ACCAGGAGAGGAAAGGTACAAATTCTCACAACTTCC...GTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACATGGTGGATGTAGCGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | ACTTCATCACCCCAGAGAGAAATACTGTACCCTTTAGACTTCACTCCCCACCAATTGAAGTGTACCTTTTaGAGGGCATGGAGCAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: TSSPQREILYPLDFTPHQLKCTF*RAWSSC Trigger: GCAGCTGCTCCATGCCCTCAAAAAGGTACACTTCAA...TTGGTGGGGAGTGAAGTCTAAAGGGTACAGTATTTCTCTCTGGGGTGATGAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS CCA 90 bp | CATATATTTGGTTCTGGTGACTCCCCTGAGAATTTATACCTTCTCTaGAGCATCTCACCCTGTTTTTCCTGCTGTGCACAGTACCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: HIFGSGDSPENLYLL*SISPCFSCCAQYPC Trigger: GCAAGGGTACTGTGCACAGCAGGAAAAACAGGGTGAGATGCTCCAGAGAAGGTATAAATTCTCAGGGGAGTCACCAGAACCAAATATATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | CTTTGCACTGTATATATGGATGCAACAGGTGTTCTGTGGTTATCAAGCAGAAGTATGTGCAGAGTGCCTTaGCTGACCCACACCTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: LCTVYMDATGVLWLSSRSMCRVP*LTHTCP Trigger: AGGACAGGTGTGGGTCAGCAAAGGCACTCTGCACAT...ACTTCTGCTTGATAACCACAGAACACCTGTTGCATCCATATATACAGTGCAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | GTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTTTTACCCATTAAGCCACTCGAGTACTGCTCCTaGGGGCACAGAAGACATCTC | + |
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Preference number: 5 (lower is better) Translates to: VSHSSCHAYWKALLPIKPLEYCS*GHRRHL Trigger: GAGATGTCTTCTGTGCCCCAAGGAGCAGTACTCGAG...TGGCTTAATGGGTAAAAGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | TGTGGGTCCTGGGTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTTTTAACTACTGTGAGAGTCTaGGCCAGAACAGAGGAGACA | + |
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Preference number: 5 (lower is better) Translates to: CGSWVSHSSCHAYWKALLTTVRV*ARTEET Trigger: TGTCTCCTCTGTTCTGGCCAAGACTCTCACAGTAGT...TAAAAGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATACCCAGGACCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | GTATCACACTCAAGTTGTCATGCTTACTGGAAAGCACTTTTACCCATTAAGCCAAAGGCCAAATGTGCCTaGCAACACCTGGGAAATGCC | + |
|
Preference number: 5 (lower is better) Translates to: VSHSSCHAYWKALLPIKPKAKCA*QHLGNA Trigger: GGCATTTCCCAGGTGTTGCAAGGCACATTTGGCCTT...TGGCTTAATGGGTAAAAGTGCTTTCCAGTAAGCATGACAACTTGAGTGTGATAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | GGCCACAAAACTGGTGTCCTCTGGAGGAGTAGAAAGTACTCTGAAAAACTGAGCGCATCAAACATAATCTaGATTCCATCCAGAGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: GHKTGVLWRSRKYSEKLSASNII*IPSRVL Trigger: CAAGACTCTGGATGGAATCAAGATTATGTTTGATGC...GCTCAGTTTTTCAGAGTACTTTCTACTCCTCCAGAGGACACCAGTTTTGTGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | GGCCACAAAACTGGTGTCCTCTGGAGGAGTAGAAAGTACTCTGAAAAACTGAGCGTCACCAAATCTCCATaGGCATCAAACATAATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GHKTGVLWRSRKYSEKLSVTKSP*ASNIIL Trigger: CAAGATTATGTTTGATGCCAATGGAGATTTGGTGAC...GCTCAGTTTTTCAGAGTACTTTCTACTCCTCCAGAGGACACCAGTTTTGTGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS CCA 90 bp | ACCTGTCCTGAGACAGGGACACCCAGTAAACCACGTAGGATGAGCTaGAAATTTAAATTGCTTAAGAAAACCAGAACAACTTTGGCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: TCPETGTPSKPRRMS*KFKLLKKTRTTLAV Trigger: TACAGCCAAAGTTGTTCTGGTTTTCTTAAGCAATTTAAATTTCCAGCTCATCCTACGTGGTTTACTGGGTGTCCCTGTCTCAGGACAGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CCA 90 bp | CCTACATGCACCAAGTGGAATACACCTGCAGGAGTCTTCTGCCCTTaGAAAATATCAAATTTTGTCACCAAATCTCCATTGGCATCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: PTCTKWNTPAGVFCP*KISNFVTKSPLASN Trigger: GTTTGATGCCAATGGAGATTTGGTGACAAAATTTGATATTTTCCAAGGGCAGAAGACTCCTGCAGGTGTATTCCACTTGGTGCATGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | ACATTATCATCATCACCTCATGACACTTTTCCCATCTTTGCACTGTATATATGGGCAATATCCAGGCTCTaGGTCCAGAAAGGTCAGACC | + |
|
Preference number: 5 (lower is better) Translates to: TLSSSPHDTFPIFALYIWAISRL*VQKGQT Trigger: GGTCTGACCTTTCTGGACCAAGAGCCTGGATATTGC...CCATATATACAGTGCAAAGATGGGAAAAGTGTCATGAGGTGATGATGATAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | ATATCAGTACTTGGGAGGGAGGCTAAGGCAGAAGCGTTACTGCAAGTTTTAAGCAGGAGTCTTCTGCCCTaGGAAAATATCAAATTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: ISVLGREAKAEALLQVLSRSLLP*ENIKFC Trigger: ACAAAATTTGATATTTTCCAAGGGCAGAAGACTCCT...GCTTAAAACTTGCAGTAACGCTTCTGCCTTAGCCTCCCTCCCAAGTACTGATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | CTTTGCACTGTATATATGGATGCAACAGGTGTTCTGTGGTTATCAAGCAGAAGTATTCCATCCAGAGTCTaGAAGTGTACCTTTTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LCTVYMDATGVLWLSSRSIPSRV*KCTFLR Trigger: CCTCAAAAAGGTACACTTCAAGACTCTGGATGGAAT...ACTTCTGCTTGATAACCACAGAACACCTGTTGCATCCATATATACAGTGCAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | ACATTATCATCATCACCTCATGACACTTTTCCCATCTTTGCACTGTATATATGGAGGAACTTGGTCTCATaGAAGATATCTGGAAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: TLSSSPHDTFPIFALYIWRNLVS*KISGRP Trigger: GGGCCTTCCAGATATCTTCAATGAGACCAAGTTCCT...CCATATATACAGTGCAAAGATGGGAAAAGTGTCATGAGGTGATGATGATAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS-3UTR CAA 90 bp | CTTTGCACTGTATATATGGATGCAACAGGTGTTCTGTGGTTATCAAGCAGAAGTAAAACCAGAACAACTTaGGCTGTACATTTCTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: LCTVYMDATGVLWLSSRSKTRTT*AVHFCI Trigger: GATGCAGAAATGTACAGCCAAAGTTGTTCTGGTTTT...ACTTCTGCTTGATAACCACAGAACACCTGTTGCATCCATATATACAGTGCAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS TCA 72 bp | GAGACAGCCACTGTGAATACCACAGCAAAGGTGGTCTaGCGGAGGAGGCAGGTGGTGACAGTGGGTCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ETATVNTTAKVV*RRRQVVTVGLP Trigger: GGGGAGACCCACTGTCACCACCTGCCTCCTCCGTCAGACCACCTTTGCTGTGGTATTCACAGTGGCTGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS TCA 72 bp | ACTCTGGGTCACCCGGTAGCCCCACATGGAGGCACTTaGAGTCTGCAGCCCAGTTGGTGGGGCAGTGAAATC | + |
|
Preference number: 6 (lower is better) Translates to: TLGHPVAPHGGT*SLQPSWWGSEI Trigger: GATTTCACTGCCCCACCAACTGGGCTGCAGACTTCAAGTGCCTCCATGTGGGGCTACCGGGTGACCCAGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS CCA 72 bp | CCCCAGCTGGACTCAGCTGCTGAGTGGCCAGAGAGCTaGCCTGCTGCCCAAAGTCATCATCTTGGGCAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: PQLDSAAEWPES*PAAQSHHLGQE Trigger: TTCTTGCCCAAGATGATGACTTTGGGCAGCAGGCCAGCTCTCTGGCCACTCAGCAGCTGAGTCCAGCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CCA 72 bp | CAAAGACGAAACTCTGGGTCACCCGGTAGCCCCACATaGAGGCACTTGAAGTCTGCAGCCCAGTTGGTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: QRRNSGSPGSPT*RHLKSAAQLVG Trigger: CCCCACCAACTGGGCTGCAGACTTCAAGTGCCTCCATGTGGGGCTACCGGGTGACCCAGAGTTTCGTCTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS CCA 72 bp | AGGGACGTGAAGGTGATACTCAATGCAAACCCCAGCTaGACTCAGCTGCTGAGTGGCCAGAGAGCTGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: RDVKVILNANPS*TQLLSGQRAGL Trigger: CAGGCCAGCTCTCTGGCCACTCAGCAGCTGAGTCCAGCTGGGGTTTGCATTGAGTATCACCTTCACGTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CCA 72 bp | CCCAGCACACAGAAGAAGGTGGCACCAGAACCCTCTTaGCACTGGATGACAATGTGCTGGGGCTCTGAGATC | + |
|
Preference number: 6 (lower is better) Translates to: PSTQKKVAPEPS*HWMTMCWGSEI Trigger: GATCTCAGAGCCCCAGCACATTGTCATCCAGTGCCAAGAGGGTTCTGGTGCCACCTTCTTCTGTGTGCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CAA 90 bp | GAAATGCCTGGTATGGTCAGGGCAAGTGCCATGTGCAGAGTGCCTTaGCTGACCCACACCTGTCCTGAGACAGGGACACCCAGTAAACCA | + |
|
Preference number: 6 (lower is better) Translates to: EMPGMVRASAMCRVP*LTHTCPETGTPSKP Trigger: TGGTTTACTGGGTGTCCCTGTCTCAGGACAGGTGTGGGTCAGCAAAGGCACTCTGCACATGGCACTTGCCCTGACCATACCAGGCATTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS TCA 72 bp | GGCATGTGTAGTTGGGGATGGGCTCCTTCTGCCCTGTaGGAAAGCCCATTGTCTCATAGAGGGCTCCATGCA | + |
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Preference number: 6 (lower is better) Translates to: GMCSWGWAPSAL*ESPLSHRGLHA Trigger: TGCATGGAGCCCTCTATGAGACAATGGGCTTTCTCACAGGGCAGAAGGAGCCCATCCCCAACTACACATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS GCA 72 bp | AGGACTGATAGGAAGGGACGTGAAGGTGATACTCAATaGAAACCCCAGCTGGACTCAGCTGCTGAGTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: RTDRKGREGDTQ*KPQLDSAAEWP Trigger: TGGCCACTCAGCAGCTGAGTCCAGCTGGGGTTTGCATTGAGTATCACCTTCACGTCCCTTCCTATCAGTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS GCA 72 bp | TCCAAGAACCAGGACAGCCAGACCAGCCAGCAAGAGTaGTACCAAAGCCAATACGAATCCCAGTGGTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: SKNQDSQTSQQE*YQSQYESQWFL Trigger: GAGGAACCACTGGGATTCGTATTGGCTTTGGTAGCACTCTTGCTGGCTGGTCTGGCTGTCCTGGTTCTTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CCA 72 bp | AGTACCAGGGCTCAGGCATATCTGGATCCTACTTCGTaGTCTGGTGACTCTGAAGGCCAGGACTACTGTGAG | + |
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Preference number: 6 (lower is better) Translates to: STRAQAYLDPTS*SGDSEGQDYCE Trigger: CTCACAGTAGTCCTGGCCTTCAGAGTCACCAGACCACGAAGTAGGATCCAGATATGCCTGAGCCCTGGTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CAA 72 bp | TGGATGACAATGTGCTGGGGCTCTGAGATCATATCCTaGTCTGGGAATGGTGGAGAGGTGGCCAACCACACC | + |
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Preference number: 6 (lower is better) Translates to: WMTMCWGSEIIS*SGNGGEVANHT Trigger: GGTGTGGTTGGCCACCTCTCCACCATTCCCAGACAAGGATATGATCTCAGAGCCCCAGCACATTGTCATCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CAA 90 bp | TCTTGGCACTGGATGACAATGTGCTGGGGCTCTGAGATCATATCCTaGTCTGGGAATGGTGGAGAGGTGGCCAACCACACCCCACAAAGA | + |
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Preference number: 6 (lower is better) Translates to: SWHWMTMCWGSEIIS*SGNGGEVANHTPQR Trigger: TCTTTGTGGGGTGTGGTTGGCCACCTCTCCACCATTCCCAGACAAGGATATGATCTCAGAGCCCCAGCACATTGTCATCCAGTGCCAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS TCA 72 bp | ACCCTCTTGGCACTGGATGACAATGTGCTGGGGCTCTaGGATCATATCCTTGTCTGGGAATGGTGGAGAGGT | + |
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Preference number: 6 (lower is better) Translates to: TLLALDDNVLGL*DHILVWEWWRG Trigger: ACCTCTCCACCATTCCCAGACAAGGATATGATCTCAGAGCCCCAGCACATTGTCATCCAGTGCCAAGAGGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS GCA 72 bp | GTGGCACCAGAACCCTCTTGGCACTGGATGACAATGTaGTGGGGCTCTGAGATCATATCCTTGTCTGGGAAT | + |
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Preference number: 6 (lower is better) Translates to: VAPEPSWHWMTM*WGSEIISLSGN Trigger: ATTCCCAGACAAGGATATGATCTCAGAGCCCCAGCACATTGTCATCCAGTGCCAAGAGGGTTCTGGTGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CCA 72 bp | CAGCAAGAGTGCTACCAAAGCCAATACGAATCCCAGTaGTTCCTCAAAGGCCAGGAAGATCTCTGTCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: QQECYQSQYESQ*FLKGQEDLCPG Trigger: CCCAGGACAGAGATCTTCCTGGCCTTTGAGGAACCACTGGGATTCGTATTGGCTTTGGTAGCACTCTTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CCA 72 bp | ACACAGAAGAAGGTGGCACCAGAACCCTCTTGGCACTaGATGACAATGTGCTGGGGCTCTGAGATCATATCC | + |
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Preference number: 6 (lower is better) Translates to: TQKKVAPEPSWH*MTMCWGSEIIS Trigger: GGATATGATCTCAGAGCCCCAGCACATTGTCATCCAGTGCCAAGAGGGTTCTGGTGCCACCTTCTTCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS TCA 72 bp | GAGAAAGCCCATTGTCTCATAGAGGGCTCCATGCACTaGGTCTCCAGAGTTTCGAATGGAGAAGCCCAGTGT | + |
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Preference number: 6 (lower is better) Translates to: EKAHCLIEGSMH*VSRVSNGEAQC Trigger: ACACTGGGCTTCTCCATTCGAAACTCTGGAGACTCAGTGCATGGAGCCCTCTATGAGACAATGGGCTTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS TCA 72 bp | AGAAGAAGGTGGCACCAGAACCCTCTTGGCACTGGATaGCAATGTGCTGGGGCTCTGAGATCATATCCTTGT | + |
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Preference number: 6 (lower is better) Translates to: RRRWHQNPLGTG*QCAGALRSYPC Trigger: ACAAGGATATGATCTCAGAGCCCCAGCACATTGTCATCCAGTGCCAAGAGGGTTCTGGTGCCACCTTCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS TCA 72 bp | AGGCACTTGAAGTCTGCAGCCCAGTTGGTGGGGCAGTaGAATCAGAGGGTGTACCATCAGAGAAGTGAAAGA | + |
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Preference number: 6 (lower is better) Translates to: RHLKSAAQLVGQ*NQRVYHQRSER Trigger: TCTTTCACTTCTCTGATGGTACACCCTCTGATTTCACTGCCCCACCAACTGGGCTGCAGACTTCAAGTGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233287.2 |
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| CDS CCA 72 bp | AGAGGGCTCCATGCACTGAGTCTCCAGAGTTTCGAATaGAGAAGCCCAGTGTCAAATTGGGCAACAAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: RGLHALSLQSFE*RSPVSNWATSE Trigger: CTCACTTGTTGCCCAATTTGACACTGGGCTTCTCCATTCGAAACTCTGGAGACTCAGTGCATGGAGCCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CAA 72 bp | CTCCTTGGGGCACAGAAGACATCTCTTCATGTCTCTTaGGTCTGTAAACTGTCCCTCAGGGCATGGACTGCA | + |
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Preference number: 6 (lower is better) Translates to: LLGAQKTSLHVS*VCKLSLRAWTA Trigger: TGCAGTCCATGCCCTGAGGGACAGTTTACAGACCAAAGAGACATGAAGAGATGTCTTCTGTGCCCCAAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS GCA 72 bp | GCTTTCACTGCAGATGGAGGTGGGCACAGTTTCCTCTaGATTCAGGGAACTTACTTGGAGATCCTCCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: AFTADGGGHSFL*IQGTYLEILLQ Trigger: TTGAAGGAGGATCTCCAAGTAAGTTCCCTGAATGCAGAGGAAACTGTGCCCACCTCCATCTGCAGTGAAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS GCA 72 bp | ATCTCACCCTGTTTTTCCTGCTGTGCACAGTACCCTTaGTTTAGCCAGGCAGGAGTGTTCTTCTCAGGTTTC | + |
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Preference number: 6 (lower is better) Translates to: ISPCFSCCAQYP*FSQAGVFFSGF Trigger: GAAACCTGAGAAGAACACTCCTGCCTGGCTAAAGCAAGGGTACTGTGCACAGCAGGAAAAACAGGGTGAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS GCA 72 bp | TTATACCTTCTCTGGAGCATCTCACCCTGTTTTTCCTaGTGTGCACAGTACCCTTGCTTTAGCCAGGCAGGA | + |
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Preference number: 6 (lower is better) Translates to: LYLLWSISPCFS*CAQYPCFSQAG Trigger: TCCTGCCTGGCTAAAGCAAGGGTACTGTGCACAGCAGGAAAAACAGGGTGAGATGCTCCAGAGAAGGTATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CCA 72 bp | TCCTTGGGGCACAGAAGACATCTCTTCATGTCTCTTTaGTCTGTAAACTGTCCCTCAGGGCATGGACTGCAA | + |
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Preference number: 6 (lower is better) Translates to: SLGHRRHLFMSL*SVNCPSGHGLQ Trigger: TTGCAGTCCATGCCCTGAGGGACAGTTTACAGACCAAAGAGACATGAAGAGATGTCTTCTGTGCCCCAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CCA 72 bp | GGTTCTGGTGACTCCCCTGAGAATTTATACCTTCTCTaGAGCATCTCACCCTGTTTTTCCTGCTGTGCACAG | + |
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Preference number: 6 (lower is better) Translates to: GSGDSPENLYLL*SISPCFSCCAQ Trigger: CTGTGCACAGCAGGAAAAACAGGGTGAGATGCTCCAGAGAAGGTATAAATTCTCAGGGGAGTCACCAGAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CAA 90 bp | CGAGTACTGCTCCTTGGGGCACAGAAGACATCTCTTCATGTCTCTTaGGTCTGTAAACTGTCCCTCAGGGCATGGACTGCAATCAAAACA | + |
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Preference number: 6 (lower is better) Translates to: RVLLLGAQKTSLHVS*VCKLSLRAWTAIKT Trigger: TGTTTTGATTGCAGTCCATGCCCTGAGGGACAGTTTACAGACCAAAGAGACATGAAGAGATGTCTTCTGTGCCCCAAGGAGCAGTACTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS TCA 72 bp | CGAATGGAGAAGCCCAGTGTCAAATTGGGCAACAAGTaGGCACTCCTATTAATCTCCTCAATGGCAAAGACG | + |
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Preference number: 6 (lower is better) Translates to: RMEKPSVKLGNK*ALLLISSMAKT Trigger: CGTCTTTGCCATTGAGGAGATTAATAGGAGTGCTCACTTGTTGCCCAATTTGACACTGGGCTTCTCCATTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS TCA 72 bp | ATGTCACTAGTCAGGGTCCGAAGAAAAGATGGAAACTaGATCTTGTCACTCAGACTGGGTAGTGAAGATGAG | + |
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Preference number: 6 (lower is better) Translates to: MSLVRVRRKDGN*ILSLRLGSEDE Trigger: CTCATCTTCACTACCCAGTCTGAGTGACAAGATTCAGTTTCCATCTTTTCTTCGGACCCTGACTAGTGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS TCA 72 bp | GTCCTGAGACAGGGACACCCAGTAAACCACGTAGGATaGGCTGGAAATTTAAATTGCTTAAGAAAACCAGAA | + |
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Preference number: 6 (lower is better) Translates to: VLRQGHPVNHVG*AGNLNCLRKPE Trigger: TTCTGGTTTTCTTAAGCAATTTAAATTTCCAGCTCATCCTACGTGGTTTACTGGGTGTCCCTGTCTCAGGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS GCA 72 bp | CTTAAGAAAACCAGAACAACTTTGGCTGTACATTTCTaGATCTTCTGGACAGTCTCTTCAATCTTCCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LKKTRTTLAVHF*IFWTVSSIFPK Trigger: CTTGGGGAAGATTGAAGAGACTGTCCAGAAGATGCAGAAATGTACAGCCAAAGTTGTTCTGGTTTTCTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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| CDS CAA 90 bp | AGGATGAGCTGGAAATTTAAATTGCTTAAGAAAACCAGAACAACTTaGGCTGTACATTTCTGCATCTTCTGGACAGTCTCTTCAATCTTC | + |
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Preference number: 6 (lower is better) Translates to: RMSWKFKLLKKTRTT*AVHFCIFWTVSSIF Trigger: GAAGATTGAAGAGACTGTCCAGAAGATGCAGAAATGTACAGCCAAAGTTGTTCTGGTTTTCTTAAGCAATTTAAATTTCCAGCTCATCCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086210.6 ENSMUST00000233287.2 |
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