RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for VMN2R53 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000096002

Ensembl transcript IDs: ENSMUST00000170412.2, ENSMUST00000232701.2, ENSMUST00000233892.2

Found 633 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTCTGGGACAGGCAGAGGCACAGAGCCGCAGAGGCAGCACCCTTTaGGGGCCGCAGACAGACAGCCACCGTCCGGACCAGAGGACAGGT +
Preference number: 1 (lower is better)
Translates to: LLGQAEAQSRRGSTL*GPQTDSHRPDQRTG
Trigger: ACCTGTCCTCTGGTCCGGACGGTGGCTGTCTGTCTGCGGCCCGCAAAGGGTGCTGCCTCTGCGGCTCTGTGCCTCTGCCTGTCCCAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp GAGTCTGAACAGGTGAGAGGGTGTGCCACAGAACCGGACAGCTTCTaGGACAGGCAGAGGCACAGAGCCGCAGAGGCAGCACCCTTTGCG +
Preference number: 1 (lower is better)
Translates to: ESEQVRGCATEPDSF*DRQRHRAAEAAPFA
Trigger: CGCAAAGGGTGCTGCCTCTGCGGCTCTGTGCCTCTGCCTGTCCCAGAAGCTGTCCGGTTCTGTGGCACACCCTCTCACCTGTTCAGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp GCTATGTGTCCTCCTGGGATTGGTCAGTCTACCGGCACCTTACTTTaGATGCACCCGCTCCGGAGGGGTTGGTGCCAGGTTCGGGCTAGC +
Preference number: 1 (lower is better)
Translates to: AMCPPGIGQSTGTLL*MHPLRRGWCQVRAS
Trigger: GCTAGCCCGAACCTGGCACCAACCCCTCCGGAGCGGGTGCATGCAAAGTAAGGTGCCGGTAGACTGACCAATCCCAGGAGGACACATAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp GAACCCCGGGAACCCAGGGAGGACTCCTTATATACACCCCAGCACTaGGGAGGGCTATGTGTCCTCCTGGGATTGGTCAGTCTACCGGCA +
Preference number: 1 (lower is better)
Translates to: EPREPREDSLYTPQH*GGLCVLLGLVSLPA
Trigger: TGCCGGTAGACTGACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAGTCCTCCCTGGGTTCCCGGGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp CTGATGGGAAGGGACGTGAAGGTGATACTCAATGCACACACCAGCTaGGGTCAACATCTGTGTGGCCAGAGAGCTGGCCTGCTGCCCAAA +
Preference number: 1 (lower is better)
Translates to: LMGRDVKVILNAHTS*GQHLCGQRAGLLPK
Trigger: TTTGGGCAGCAGGCCAGCTCTCTGGCCACACAGATGTTGACCCCAGCTGGTGTGTGCATTGAGTATCACCTTCACGTCCCTTCCCATCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 90 bp AGTGGTTCCTCAAAGGCCAAGAAGATCTCTGTCCTGGGCAGGCAATaGTCTCTGGTGTGGCTCGAGTACTGCTCCTTGGGGCACAGAAGG +
Preference number: 1 (lower is better)
Translates to: SGSSKAKKISVLGRQ*SLVWLEYCSLGHRR
Trigger: CCTTCTGTGCCCCAAGGAGCAGTACTCGAGCCACACCAGAGACCATTGCCTGCCCAGGACAGAGATCTTCTTGGCCTTTGAGGAACCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 90 bp CAGGTAGTAACTGGGACAAAAGGGATCCAGAGATGCAGGAACCCCTaGTCGACCCAGTGGCTAGGATGTCTGAACTGGTGCCCTAAGCAG +
Preference number: 1 (lower is better)
Translates to: QVVTGTKGIQRCRNP*STQWLGCLNWCPKQ
Trigger: CTGCTTAGGGCACCAGTTCAGACATCCTAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGTTACTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp ATCACCTTGTGGAGAGCCATGCCTCGAGCAATCGCATGCGTGCCATaGGCAATCGCCATTATAAGATGGCGCTGGCTTCCACTGCACCTA +
Preference number: 1 (lower is better)
Translates to: ITLWRAMPRAIACVP*AIAIIRWRWLPLHL
Trigger: TAGGTGCAGTGGAAGCCAGCGCCATCTTATAATGGCGATTGCCCATGGCACGCATGCGATTGCTCGAGGCATGGCTCTCCACAAGGTGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp GGGACAAAAGGGATCCAGAGATGCAGGAACCCCTGCTCGACCCAGTaGCTAGGATGTCTGAACTGGTGCCCTAAGCAGACATTAGGTGTG +
Preference number: 1 (lower is better)
Translates to: GTKGIQRCRNPCSTQ*LGCLNWCPKQTLGV
Trigger: CACACCTAATGTCTGCTTAGGGCACCAGTTCAGACATCCTAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 90 bp AGAACGGAGGAGACAGCCACTGTGAATACCACAGCAAAGATGGTCTaGCGGAGGAGGCAGGTAGTAACAGTGGGTCTCCCAAGGAAGAGC +
Preference number: 1 (lower is better)
Translates to: RTEETATVNTTAKMV*RRRQVVTVGLPRKS
Trigger: GCTCTTCCTTGGGAGACCCACTGTTACTACCTGCCTCCTCCGTCAGACCATCTTTGCTGTGGTATTCACAGTGGCTGTCTCCTCCGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR TCA 90 bp GGCTCCAGAACCCTCATGGCATTGGATGACAGTGTGCCGGGGCTCTaGGATCATATCCCTGTCTGGGAATGGTGGAGAGGTAATCAACCA +
Preference number: 1 (lower is better)
Translates to: GSRTLMALDDSVPGL*DHIPVWEWWRGNQP
Trigger: TGGTTGATTACCTCTCCACCATTCCCAGACAGGGATATGATCTCAGAGCCCCGGCACACTGTCATCCAATGCCATGAGGGTTCTGGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 90 bp CAGAAGAAGTTGGCTCCAGAACCCTCATGGCATTGGATGACAGTGTaGCGGGGCTCTGAGATCATATCCCTGTCTGGGAATGGTGGAGAG +
Preference number: 1 (lower is better)
Translates to: QKKLAPEPSWHWMTV*RGSEIISLSGNGGE
Trigger: CTCTCCACCATTCCCAGACAGGGATATGATCTCAGAGCCCCGGCACACTGTCATCCAATGCCATGAGGGTTCTGGAGCCAACTTCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 90 bp AAACCCAGCACACAGAAGAAGTTGGCTCCAGAACCCTCATGGCATTaGATGACAGTGTGCCGGGGCTCTGAGATCATATCCCTGTCTGGG +
Preference number: 1 (lower is better)
Translates to: KPSTQKKLAPEPSWH*MTVCRGSEIISLSG
Trigger: CCCAGACAGGGATATGATCTCAGAGCCCCGGCACACTGTCATCCAATGCCATGAGGGTTCTGGAGCCAACTTCTTCTGTGTGCTGGGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 90 bp CCCAAGAAACCCAGCACACAGAAGAAGTTGGCTCCAGAACCCTCATaGCATTGGATGACAGTGTGCCGGGGCTCTGAGATCATATCCCTG +
Preference number: 1 (lower is better)
Translates to: PKKPSTQKKLAPEPS*HWMTVCRGSEIISL
Trigger: CAGGGATATGATCTCAGAGCCCCGGCACACTGTCATCCAATGCCATGAGGGTTCTGGAGCCAACTTCTTCTGTGTGCTGGGTTTCTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 90 bp CACCTTCTCTGGAGCATCTCACACTGCCTATTGTGCTGTACCTGGTaGCCTTGCCTTAACCAGGCAGGGGTGTTCTTCTCAGGTTTCAGC +
Preference number: 1 (lower is better)
Translates to: HLLWSISHCLLCCTW*PCLNQAGVFFSGFS
Trigger: GCTGAAACCTGAGAAGAACACCCCTGCCTGGTTAAGGCAAGGCCACCAGGTACAGCACAATAGGCAGTGTGAGATGCTCCAGAGAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR TCA 90 bp TCAGGAGGTTGGTCAAACCAGGATCTCAGGGTCCAAGAGGCAGCTTaGCTCCCAGGAACTCTGAAACACTCAGGATCTCAGGATCACAGG +
Preference number: 1 (lower is better)
Translates to: SGGWSNQDLRVQEAA*LPGTLKHSGSQDHR
Trigger: CCTGTGATCCTGAGATCCTGAGTGTTTCAGAGTTCCTGGGAGTCAAGCTGCCTCTTGGACCCTGAGATCCTGGTTTGACCAACCTCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 90 bp TCTGTGCACCTTCCCTGTAAGAGAGCTTGCCAGCAGAGAGTGCTCTaGGCACTGAAACTCAGAGGAGAGAATCTGTCTCCCAGGTCTGCT +
Preference number: 1 (lower is better)
Translates to: SVHLPCKRACQQRVL*ALKLRGENLSPRSA
Trigger: AGCAGACCTGGGAGACAGATTCTCTCCTCTGAGTTTCAGTGCTCAGAGCACTCTCTGCTGGCAAGCTCTCTTACAGGGAAGGTGCACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 90 bp CCAGGACAGCCAGACCAGCCAGCAAGAGTGCTACCAAAGCCAATATaGATCCCAGTGGTTCCTCAAAGGCCAAGAAGATCTCTGTCCTGG +
Preference number: 1 (lower is better)
Translates to: PGQPDQPARVLPKPI*IPVVPQRPRRSLSW
Trigger: CCAGGACAGAGATCTTCTTGGCCTTTGAGGAACCACTGGGATTCATATTGGCTTTGGTAGCACTCTTGCTGGCTGGTCTGGCTGTCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 90 bp TGCTGTGATACAGAAGGCCAAATGTGCCTTGCAACACCTGGGAAATaGCTGGTATGGTCAGGGCAAGTGCCATGTGCAGAGTGTCCATGC +
Preference number: 1 (lower is better)
Translates to: CCDTEGQMCLATPGK*LVWSGQVPCAECPC
Trigger: GCATGGACACTCTGCACATGGCACTTGCCCTGACCATACCAGGCATTTCCCAGGTGTTGCAAGGCACATTTGGCCTTCTGTATCACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 90 bp CTCTGGAGCATCTCACACTGCCTATTGTGCTGTACCTGGTGGCCTTaGCTTAACCAGGCAGGGGTGTTCTTCTCAGGTTTCAGCAAGATG +
Preference number: 1 (lower is better)
Translates to: LWSISHCLLCCTWWP*LNQAGVFFSGFSKM
Trigger: CATCTTGCTGAAACCTGAGAAGAACACCCCTGCCTGGTTAAGGCAAGGCCACCAGGTACAGCACAATAGGCAGTGTGAGATGCTCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 90 bp GTGATACAGAAGGCCAAATGTGCCTTGCAACACCTGGGAAATGCCTaGTATGGTCAGGGCAAGTGCCATGTGCAGAGTGTCCATGCTGAC +
Preference number: 1 (lower is better)
Translates to: VIQKAKCALQHLGNA*YGQGKCHVQSVHAD
Trigger: GTCAGCATGGACACTCTGCACATGGCACTTGCCCTGACCATACCAGGCATTTCCCAGGTGTTGCAAGGCACATTTGGCCTTCTGTATCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 90 bp ACACACCTTCTCTGGAGCATCTCACACTGCCTATTGTGCTGTACCTaGTGGCCTTGCCTTAACCAGGCAGGGGTGTTCTTCTCAGGTTTC +
Preference number: 1 (lower is better)
Translates to: THLLWSISHCLLCCT*WPCLNQAGVFFSGF
Trigger: GAAACCTGAGAAGAACACCCCTGCCTGGTTAAGGCAAGGCCACCAGGTACAGCACAATAGGCAGTGTGAGATGCTCCAGAGAAGGTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 90 bp CCCAGAGGGTCTGTGGCAGTAAGTCCACACCACAAGCCCTACACCTaGCAATTTCTCTTAAAGCACACCAAAACCCATAAACTGCACCCC +
Preference number: 1 (lower is better)
Translates to: PRGSVAVSPHHKPYT*QFLLKHTKTHKLHP
Trigger: GGGGTGCAGTTTATGGGTTTTGGTGTGCTTTAAGAGAAATTGGCAGGTGTAGGGCTTGTGGTGTGGACTTACTGCCACAGACCCTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp CAGGAACACTCCAAGAACCAGGACAGCCAGACCAGCCAGCAAGAGTaGTACCAAAGCCAATATGAATCCCAGTGGTTCCTCAAAGGCCAA +
Preference number: 1 (lower is better)
Translates to: QEHSKNQDSQTSQQE*YQSQYESQWFLKGQ
Trigger: TTGGCCTTTGAGGAACCACTGGGATTCATATTGGCTTTGGTAGCACTCTTGCTGGCTGGTCTGGCTGTCCTGGTTCTTGGAGTGTTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 90 bp CAGTACCCCGGAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATaGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCATTGGACTTGC +
Preference number: 1 (lower is better)
Translates to: QYPGALVSSCICIKR*PSRPSLQREAHWTC
Trigger: GCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCCGGGGTACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp TGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTaGGATTGCAGGCTTGTACAACCACTATGGAAATCAGTCTGGCGG +
Preference number: 1 (lower is better)
Translates to: CWRGCGERGTLLHCW*DCRLVQPLWKSVWR
Trigger: CCGCCAGACTGATTTCCATAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCACGCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp GACCAGCGCCATCTTTTAGGCGTCGGCTGTATACACAGAAGGACCTaGAAAAATGCCCTGCAGGCTCTAAGATCTCACAGATGCCAGACA +
Preference number: 1 (lower is better)
Translates to: DQRHLLGVGCIHRRT*KNALQALRSHRCQT
Trigger: TGTCTGGCATCTGTGAGATCTTAGAGCCTGCAGGGCATTTTTCCAGGTCCTTCTGTGTATACAGCCGACGCCTAAAAGATGGCGCTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp CAGACCAGCCAGCAAGAGTGCTACCAAAGCCAATATGAATCCCAGTaGTTCCTCAAAGGCCAAGAAGATCTCTGTCCTGGGCAGGCAATG +
Preference number: 1 (lower is better)
Translates to: QTSQQECYQSQYESQ*FLKGQEDLCPGQAM
Trigger: CATTGCCTGCCCAGGACAGAGATCTTCTTGGCCTTTGAGGAACCACTGGGATTCATATTGGCTTTGGTAGCACTCTTGCTGGCTGGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 90 bp GTGCATGCTGAAAGGAGCCTGGTATGGTTGTCTCTTGAGATGCCCTaGCAGAGCCTTACAAATACAGAGGCAGATGCTCATAGCCAACCA +
Preference number: 1 (lower is better)
Translates to: VHAERSLVWLSLEMP*QSLTNTEADAHSQP
Trigger: TGGTTGGCTATGAGCATCTGCCTCTGTATTTGTAAGGCTCTGGCAGGGCATCTCAAGAGACAACCATACCAGGCTCCTTTCAGCATGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp CGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTaGAGGCTTGTACAACCACTATGGAAATCAGTCTGGCGGTTCCTC +
Preference number: 1 (lower is better)
Translates to: RGCGERGTLLHCWWD*RLVQPLWKSVWRFL
Trigger: GAGGAACCGCCAGACTGATTTCCATAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp ACAATCAAAGGTGAACTCCCAGAACTTCTTTATAAACATGTCTTCTaGGGTCTGGCTGGGGCGCAGGTGAGCAAGGAACTCAGGGAAGCC +
Preference number: 1 (lower is better)
Translates to: TIKGELPELLYKHVF*GLAGAQVSKELREA
Trigger: GGCTTCCCTGAGTTCCTTGCTCACCTGCGCCCCAGCCAGACCCCAGAAGACATGTTTATAAAGAAGTTCTGGGAGTTCACCTTTGATTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 90 bp CATAAACTTGATCCTAGTGACTCTCCTGAGGACACACACCTTCTCTaGAGCATCTCACACTGCCTATTGTGCTGTACCTGGTGGCCTTGC +
Preference number: 1 (lower is better)
Translates to: HKLDPSDSPEDTHLL*SISHCLLCCTWWPC
Trigger: GCAAGGCCACCAGGTACAGCACAATAGGCAGTGTGAGATGCTCCAGAGAAGGTGTGTGTCCTCAGGAGAGTCACTAGGATCAAGTTTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 90 bp AAGAAGTGCATGCTGAAAGGAGCCTGGTATGGTTGTCTCTTGAGATaGCCTGCCAGAGCCTTACAAATACAGAGGCAGATGCTCATAGCC +
Preference number: 1 (lower is better)
Translates to: KKCMLKGAWYGCLLR*PARALQIQRQMLIA
Trigger: GGCTATGAGCATCTGCCTCTGTATTTGTAAGGCTCTGGCAGGGCATCTCAAGAGACAACCATACCAGGCTCCTTTCAGCATGCACTTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp GTCCCACAAAATCCAGAGGAAGCTCCACTCCCAGGTGCTCTAAAATaGCCAGGATCAGAGGATCACAGGATTACAGAATCTCAGGAGGTT +
Preference number: 1 (lower is better)
Translates to: VPQNPEEAPLPGALK*PGSEDHRITESQEV
Trigger: AACCTCCTGAGATTCTGTAATCCTGTGATCCTCTGATCCTGGGCATTTTAGAGCACCTGGGAGTGGAGCTTCCTCTGGATTTTGTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp TCCACAGTCAGTCCCACAAAATCCAGAGGAAGCTCCACTCCCAGGTaGTCTAAAATGCCCAGGATCAGAGGATCACAGGATTACAGAATC +
Preference number: 1 (lower is better)
Translates to: STVSPTKSRGSSTPR*SKMPRIRGSQDYRI
Trigger: GATTCTGTAATCCTGTGATCCTCTGATCCTGGGCATTTTAGAGCACCTGGGAGTGGAGCTTCCTCTGGATTTTGTGGGACTGACTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp AGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTaGTGGGATTGCAGGCTTGTACAACCACTATGGAAATCAGTCTGG +
Preference number: 1 (lower is better)
Translates to: RCWRGCGERGTLLHC*WDCRLVQPLWKSVW
Trigger: CCAGACTGATTTCCATAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCACGCCAGCATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp TGCCCTTCACAGCTTCCCAATCACTGCAGACAGCTCTGTGGCCTCTaGAAGGAAACCCACAACCATGTCTTAACTGGTTTACATCTCAGT +
Preference number: 1 (lower is better)
Translates to: CPSQLPNHCRQLCGL*KETHNHVLTGLHLS
Trigger: ACTGAGATGTAAACCAGTTAAGACATGGTTGTGGGTTTCCTTCCAGAGGCCACAGAGCTGTCTGCAGTGATTGGGAAGCTGTGAAGGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 90 bp AAACGCAACATGGTCGAATTCTTTTCAACAGCTTTATTGCAGAAATaGCTTGATGCTACGGGAACCCCGGGAACCCAGGGAGGACTCCTT +
Preference number: 1 (lower is better)
Translates to: KRNMVEFFSTALLQK*LDATGTPGTQGGLL
Trigger: AAGGAGTCCTCCCTGGGTTCCCGGGGTTCCCGTAGCATCAAGGCATTTCTGCAATAAAGCTGTTGAAAAGAATTCGACCATGTTGCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp TCTCCTGGTGCTCACAGGCTAGCATATTGTGCAGAGCATGGGCAATaGTGTAGACAGCTGTGTAAGCAGCATCAATTCTACTCACTTCTG +
Preference number: 1 (lower is better)
Translates to: SPGAHRLAYCAEHGQ*CRQLCKQHQFYSLL
Trigger: CAGAAGTGAGTAGAATTGATGCTGCTTACACAGCTGTCTACAGCATTGCCCATGCTCTGCACAATATGCTAGCCTGTGAGCACCAGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR TCA 90 bp TCCACTCCCAGGCACCCTAACATACCCAGTATCATAGGATCTAGGTaGGGAGGACTCAACATCTGTTCTAACACAACAGGTAGTAACTGG +
Preference number: 1 (lower is better)
Translates to: STPRHPNIPSIIGSR*GGLNICSNTTGSNW
Trigger: CCAGTTACTACCTGTTGTGTTAGAACAGATGTTGAGTCCTCCTCACCTAGATCCTATGATACTGGGTATGTTAGGGTGCCTGGGAGTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 90 bp CTTAGGAATTTAGTCTGCACAGGTGAAAGTATGCACCACAGAAGCTaGCAGCTTCTGGGACCTGCCAAAGCAACACAGCTTCTGAGAAAG +
Preference number: 1 (lower is better)
Translates to: LRNLVCTGESMHHRS*QLLGPAKATQLLRK
Trigger: CTTTCTCAGAAGCTGTGTTGCTTTGGCAGGTCCCAGAAGCTGTCAGCTTCTGTGGTGCATACTTTCACCTGTGCAGACTAAATTCCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp CCAGTCAGAATGGCTAAGTGCAAAAACTCAGGTGACAGCAGATGCTaGCAAGAATGTGAAGAAAAAGGAACACTCCACCATTGGTGGCAG +
Preference number: 1 (lower is better)
Translates to: PVRMAKCKNSGDSRC*QECEEKGTLHHWWQ
Trigger: CTGCCACCAATGGTGGAGTGTTCCTTTTTCTTCACATTCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCACTTAGCCATTCTGACTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp TACTATTGTGGATGCCAAGAAGTGCATGCTGAAAGGAGCCTGGTATaGTTGTCTCTTGAGATGCCCTGCCAGAGCCTTACAAATACAGAG +
Preference number: 1 (lower is better)
Translates to: YYCGCQEVHAERSLV*LSLEMPCQSLTNTE
Trigger: CTCTGTATTTGTAAGGCTCTGGCAGGGCATCTCAAGAGACAACCATACCAGGCTCCTTTCAGCATGCACTTCTTGGCATCCACAATAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 90 bp CAACATGGTCGAATTCTTTTCAACAGCTTTATTGCAGAAATGCCTTaGTGCTACGGGAACCCCGGGAACCCAGGGAGGACTCCTTATATA +
Preference number: 1 (lower is better)
Translates to: QHGRILFNSFIAEMP*CYGNPGNPGRTPYI
Trigger: TATATAAGGAGTCCTCCCTGGGTTCCCGGGGTTCCCGTAGCATCAAGGCATTTCTGCAATAAAGCTGTTGAAAAGAATTCGACCATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 90 bp AGATCCTGCTTCAACTGGACCATCATTTTGTTTCCTGAAGAGGCTTaGGGGTCTATCAAGCCTACATGCACCAAGTGGAATACACCTGCA +
Preference number: 1 (lower is better)
Translates to: RSCFNWTIILFPEEA*GSIKPTCTKWNTPA
Trigger: TGCAGGTGTATTCCACTTGGTGCATGTAGGCTTGATAGACCCTCAAGCCTCTTCAGGAAACAAAATGATGGTCCAGTTGAAGCAGGATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 90 bp GGCTTGAGGGTCTATCAAGCCTACATGCACCAAGTGGAATACACCTaGAGGAGTCTTCTTCCCTTGGAAAATGTCAAATTGTGTCACCAA +
Preference number: 1 (lower is better)
Translates to: GLRVYQAYMHQVEYT*RSLLPLENVKLCHQ
Trigger: TTGGTGACACAATTTGACATTTTCCAAGGGAAGAAGACTCCTGCAGGTGTATTCCACTTGGTGCATGTAGGCTTGATAGACCCTCAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR TCA 90 bp GAAATTCCTAGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTaGGGTAACCCAATCACAAAGGAACTCTCACAATATGTACTCACT +
Preference number: 1 (lower is better)
Translates to: EIPRQMDGPGGHHPE*GNPITKELSQYVLT
Trigger: AGTGAGTACATATTGTGAGAGTTCCTTTGTGATTGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGCCTAGGAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp AGCTGTGTAAGCAGCATCAATTCTACTCACTTCTGGAAAGGGATGTaGCTTGTTTTTCAGACTCTCATTTCCTGTGCAGAACTGGACACC +
Preference number: 1 (lower is better)
Translates to: SCVSSINSTHFWKGM*LVFQTLISCAELDT
Trigger: GGTGTCCAGTTCTGCACAGGAAATGAGAGTCTGAAAAACAAGCCACATCCCTTTCCAGAAGTGAGTAGAATTGATGCTGCTTACACAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR TCA 90 bp ACTAGCAAGATTTTGCTGAAAGGACCCAGATATAGCTGTCTCTTGTaGGACTATGCCAATGGCCTAGCAAACACAGAAGTGGATGTTCAC +
Preference number: 1 (lower is better)
Translates to: TSKILLKGPRYSCLL*DYANGLANTEVDVH
Trigger: GTGAACATCCACTTCTGTGTTTGCTAGGCCATTGGCATAGTCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp CATATACAGTTACAAAACCCAGATACTATTGTGGATGCCAAGAAGTaGATGCTGAAAGGAGCCTGGTATGGTTGTCTCTTGAGATGCCCT +
Preference number: 1 (lower is better)
Translates to: HIQLQNPDTIVDAKK*MLKGAWYGCLLRCP
Trigger: AGGGCATCTCAAGAGACAACCATACCAGGCTCCTTTCAGCATGCACTTCTTGGCATCCACAATAGTATCTGGGTTTTGTAACTGTATATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp CCTACATGCACCAAGTGGAATACACCTGCAGGAGTCTTCTTCCCTTaGAAAATGTCAAATTGTGTCACCAAATCTCCATTGGCATCAAAC +
Preference number: 1 (lower is better)
Translates to: PTCTKWNTPAGVFFP*KMSNCVTKSPLASN
Trigger: GTTTGATGCCAATGGAGATTTGGTGACACAATTTGACATTTTCCAAGGGAAGAAGACTCCTGCAGGTGTATTCCACTTGGTGCATGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR TCA 90 bp AGCTTCCAAACGCTGACACCATTTCATACACTAGCAAGATTTTGCTaGAAGGACCCAGATATAGCTGTCTCTTGTGAGACTATGCCAATG +
Preference number: 1 (lower is better)
Translates to: SFQTLTPFHTLARFC*KDPDIAVSCETMPM
Trigger: CATTGGCATAGTCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGAAATGGTGTCAGCGTTTGGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp GGATTCATCCCATATACAGTTACAAAACCCAGATACTATTGTGGATaGCAAGAAGTGCATGCTGAAAGGAGCCTGGTATGGTTGTCTCTT +
Preference number: 1 (lower is better)
Translates to: GFIPYTVTKPRYYCG*QEVHAERSLVWLSL
Trigger: AAGAGACAACCATACCAGGCTCCTTTCAGCATGCACTTCTTGGCATCCACAATAGTATCTGGGTTTTGTAACTGTATATGGGATGAATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp AGAAGGACCTGGAAAAATGCCCTGCAGGCTCTAAGATCTCACAGATaGCAGACAGCATTTAATACCATACTCAGCAAACTTTCAATTACA +
Preference number: 1 (lower is better)
Translates to: RRTWKNALQALRSHR*QTAFNTILSKLSIT
Trigger: TGTAATTGAAAGTTTGCTGAGTATGGTATTAAATGCTGTCTGGCATCTGTGAGATCTTAGAGCCTGCAGGGCATTTTTCCAGGTCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp ATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATaGATACAGAAAATGTGGTACATTTACACTATGGATTACTACTCA +
Preference number: 1 (lower is better)
Translates to: IARSWKEPRCPSTEE*IQKMWYIYTMDYYS
Trigger: TGAGTAGTAATCCATAGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp AACCACAGTAAAAGCAGAAAATGTTCTGCCTGTCAATTTCCCACATaGTCAGCAAACCTTGACAACATCATCATCATCATCATCACCTCA +
Preference number: 1 (lower is better)
Translates to: NHSKSRKCSACQFPT*SANLDNIIIIIITS
Trigger: TGAGGTGATGATGATGATGATGATGTTGTCAAGGTTTGCTGAGCATGTGGGAAATTGACAGGCAGAACATTTTCTGCTTTTACTGTGGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp TGCAAAGCAAGTCTCAACAGACACAAGAAAATTGACATAACACCCTaGATCCTATCTTACTACCACAGATTTCAGCTGGATGTCAACAAC +
Preference number: 1 (lower is better)
Translates to: CKASLNRHKKIDITP*ILSYYHRFQLDVNN
Trigger: GTTGTTGACATCCAGCTGAAATCTGTGGTAGTAAGATAGGATGCAGGGTGTTATGTCAATTTTCTTGTGTCTGTTGAGACTTGCTTTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp ATAGATCAAAGACTAAAGGAAAGACCATCCAGAGACTGTCCCACCTaGGGATTCATCCCATATACAGTTACAAAACCCAGATACTATTGT +
Preference number: 1 (lower is better)
Translates to: IDQRLKERPSRDCPT*GFIPYTVTKPRYYC
Trigger: ACAATAGTATCTGGGTTTTGTAACTGTATATGGGATGAATCCCCAGGTGGGACAGTCTCTGGATGGTCTTTCCTTTAGTCTTTGATCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp GAAATCGAAGAAGATCTCAGAAGATGGAAAGATCCCCCATGCTCATaGATTGGCAGGACTAATATAGTAAAAATGGCCATCTTGCCAAAA +
Preference number: 1 (lower is better)
Translates to: EIEEDLRRWKDPPCS*IGRTNIVKMAILPK
Trigger: TTTTGGCAAGATGGCCATTTTTACTATATTAGTCCTGCCAATCCATGAGCATGGGGGATCTTTCCATCTTCTGAGATCTTCTTCGATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp ATCATTCTCCATGATCAAGTAGGCTTCATCCCAGGAATGCAGGGGTaGTTCAATATACAGAAATCCATCAGTGTAATCCACCACATAAAA +
Preference number: 1 (lower is better)
Translates to: IILHDQVGFIPGMQG*FNIQKSISVIHHIK
Trigger: TTTTATGTGGTGGATTACACTGATGGATTTCTGTATATTGAACCACCCCTGCATTCCTGGGATGAAGCCTACTTGATCATGGAGAATGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp TTACTTGGCATCATCAGAACCCAATTCTCCCACTATAGCAAGTCCTaGATACACCATCATAGCAGAAAAGCAAGATTCAGATCTACAATC +
Preference number: 1 (lower is better)
Translates to: LLGIIRTQFSHYSKS*IHHHSRKARFRSTI
Trigger: GATTGTAGATCTGAATCTTGCTTTTCTGCTATGATGGTGTATCCAGGACTTGCTATAGTGGGAGAATTGGGTTCTGATGATGCCAAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp CTAGAGGCCAAAATAAGAGCACAATCTACAATAGCCAGAGCAATATaGGACCATCACAGCTCAGCTATCCTTAATATTCTAACACAGATG +
Preference number: 1 (lower is better)
Translates to: LEAKIRAQSTIARAI*DHHSSAILNILTQM
Trigger: CATCTGTGTTAGAATATTAAGGATAGCTGAGCTGTGATGGTCCCATATTGCTCTGGCTATTGTAGATTGTGCTCTTATTTTGGCCTCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp ATAGTGGGAGACTTCAACACACCACTTTCACCAATGGACAGATCATaGAAACAGAAACTAAACAGGGACACAGTGAAACTAACAGATGTT +
Preference number: 1 (lower is better)
Translates to: IVGDFNTPLSPMDRS*KQKLNRDTVKLTDV
Trigger: AACATCTGTTAGTTTCACTGTGTCCCTGTTTAGTTTCTGTTTCCATGATCTGTCCATTGGTGAAAGTGGTGTGTTGAAGTCTCCCACTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp ATTACACCAGATTTTTCACCAGAGACTATGAAAGCCAGAAGAGCCTaGACAGATGTTATACAGACACTAAGAGAACACAAATTCCATCCC +
Preference number: 1 (lower is better)
Translates to: ITPDFSPETMKARRA*TDVIQTLREHKFHP
Trigger: GGGATGGAATTTGTGTTCTCTTAGTGTCTGTATAACATCTGTCCAGGCTCTTCTGGCTTTCATAGTCTCTGGTGAAAAATCTGGTGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 90 bp TGCTCAGCAAACCTTGACAACATCATCATCATCATCATCACCTCATaGTACTTTGCGCACTTTGGCATTGATATTTTATGGGTATGCATG +
Preference number: 1 (lower is better)
Translates to: CSANLDNIIIIIITS*YFAHFGIDILWVCM
Trigger: CATGCATACCCATAAAATATCAATGCCAAAGTGCGCAAAGTATCATGAGGTGATGATGATGATGATGATGTTGTCAAGGTTTGCTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp AAGAAAGAAATCGAAGAAGATCTCAGAAGATGGAAAGATCCCCCATaGTCATGGATTGGCAGGACTAATATAGTAAAAATGGCCATCTTG +
Preference number: 1 (lower is better)
Translates to: KKEIEEDLRRWKDPP*SWIGRTNIVKMAIL
Trigger: CAAGATGGCCATTTTTACTATATTAGTCCTGCCAATCCATGAGCATGGGGGATCTTTCCATCTTCTGAGATCTTCTTCGATTTCTTTCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp AAGGCAAAGGACACTGTCAATAGGACAAAACAGCAACCAACAGACTaGGAAAAGATCTTTACCAATCCTACATCATATAGAGGGCTAATA +
Preference number: 1 (lower is better)
Translates to: KAKDTVNRTKQQPTD*EKIFTNPTSYRGLI
Trigger: TATTAGCCCTCTATATGATGTAGGATTGGTAAAGATCTTTTCCCAGTCTGTTGGTTGCTGTTTTGTCCTATTGACAGTGTCCTTTGCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp TACTCAGCTATTAAAAACAATGAATTTATGAAATTCCTAGGCAAATaGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACCCAATCA +
Preference number: 1 (lower is better)
Translates to: YSAIKNNEFMKFLGK*MDLEGIILSEVTQS
Trigger: TGATTGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGCCTAGGAATTTCATAAATTCATTGTTTTTAATAGCTGAGTA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp ATCATCCATCCTGACCAAGTAGGTTTCATCCCAGGGATGCAGGGATaGTTCAATATATGGAAATCCATCAACATAATCCAGTATATAAAC +
Preference number: 1 (lower is better)
Translates to: IIHPDQVGFIPGMQG*FNIWKSINIIQYIN
Trigger: GTTTATATACTGGATTATGTTGATGGATTTCCATATATTGAACCATCCCTGCATCCCTGGGATGAAACCTACTTGGTCAGGATGGATGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 90 bp CCACATAATAGGTCACAAAACAGGCCTCAACAGATTCAAAAATATTaGAATTGTTCCATGCATCCTATCAGATCACCATGCACTAAGGCT +
Preference number: 1 (lower is better)
Translates to: PHNRSQNRPQQIQKY*NCSMHPIRSPCTKA
Trigger: AGCCTTAGTGCATGGTGATCTGATAGGATGCATGGAACAATTTCAATATTTTTGAATCTGTTGAGGCCTGTTTTGTGACCTATTATGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 90 bp CCACAATATCAAATGCAAAGCAAGTCTCAACAGACACAAGAAAATTaGCATAACACCCTGCATCCTATCTTACTACCACAGATTTCAGCT +
Preference number: 1 (lower is better)
Translates to: PQYQMQSKSQQTQEN*HNTLHPILLPQISA
Trigger: AGCTGAAATCTGTGGTAGTAAGATAGGATGCAGGGTGTTATGTCAATTTTCTTGTGTCTGTTGAGACTTGCTTTGCATTTGATATTGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp GAGAAACTTGAAGCAATCCCACTAAAATCAGAGACTAGACAAAGCTaGCCACTCTCTCCCTATCTATTCAATATAGTATTTGAAGTTCTG +
Preference number: 1 (lower is better)
Translates to: EKLEAIPLKSETRQS*PLSPYLFNIVFEVL
Trigger: CAGAACTTCAAATACTATATTGAATAGATAGGGAGAGAGTGGGCAGCTTTGTCTAGTCTCTGATTTTAGTGGGATTGCTTCAAGTTTCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp AGATTGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTaGAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACA +
Preference number: 1 (lower is better)
Translates to: RLRIDKWDLMKLQSF*KAKDTVNKTKRPPT
Trigger: TGTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTTCATTAGGTCCCATTTGTCAATTCTCAATCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp AACTTCAAGTTTCTGAAGAAAGAAATCGAAGAAGATCTCAGAAGATaGAAAGATCCCCCATGCTCATGGATTGGCAGGACTAATATAGTA +
Preference number: 1 (lower is better)
Translates to: NFKFLKKEIEEDLRR*KDPPCSWIGRTNIV
Trigger: TACTATATTAGTCCTGCCAATCCATGAGCATGGGGGATCTTTCCATCTTCTGAGATCTTCTTCGATTTCTTTCTTCAGAAACTTGAAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp AACTTCAAGTCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATaGAAAGATCTCCCATGCTCAGGGATCGGCAGGATCAATATAGTA +
Preference number: 1 (lower is better)
Translates to: NFKSLKKEIKEDLRR*KDLPCSGIGRINIV
Trigger: TACTATATTGATCCTGCCGATCCCTGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAATTTCTTTCTTCAGAGACTTGAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp GACCAAGTAGGTTTCATCCCAGGGATGCAGGGATGGTTCAATATATaGAAATCCATCAACATAATCCAGTATATAAACAAACTCAAAGAC +
Preference number: 1 (lower is better)
Translates to: DQVGFIPGMQGWFNI*KSINIIQYINKLKD
Trigger: GTCTTTGAGTTTGTTTATATACTGGATTATGTTGATGGATTTCCATATATTGAACCATCCCTGCATCCCTGGGATGAAACCTACTTGGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp CAAAACATCCAGGAAATCCAGGACACAATGAGAAGACCAAACCTATaGATAATAGGAGTGGATGAGAATGAAGATTTTCAACTCAAAGGA +
Preference number: 1 (lower is better)
Translates to: QNIQEIQDTMRRPNL*IIGVDENEDFQLKG
Trigger: TCCTTTGAGTTGAAAATCTTCATTCTCATCCACTCCTATTATCCATAGGTTTGGTCTTCTCATTGTGTCCTGGATTTCCTGGATGTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp AATACACTAACAAACTGGCTACACAAACAAGACCCAACATTTTGCTaGTTACAGGAAACTCAACTCAGAGAAAAAGATAGATACTACCTC +
Preference number: 1 (lower is better)
Translates to: NTLTNWLHKQDPTFC*LQETQLREKDRYYL
Trigger: GAGGTAGTATCTATCTTTTTCTCTGAGTTGAGTTTCCTGTAAGCAGCAAAATGTTGGGTCTTGTTTGTGTAGCCAGTTTGTTAGTGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 90 bp TACTTTAAACCCAAGTCATTTGTGTTTTGTCCTAAGTATCTCACTTaGTCTGTCTTTCAGATACCTTGTGAACCACAAAGAAACTGTGAG +
Preference number: 1 (lower is better)
Translates to: YFKPKSFVFCPKYLT*SVFQIPCEPQRNCE
Trigger: CTCACAGTTTCTTTGTGGTTCACAAGGTATCTGAAAGACAGATCAAGTGAGATACTTAGGACAAAACACAAATGACTTGGGTTTAAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 90 bp ATTCTTCTACAAAAGGCTATACTCAACAAAACTGGAGAACCTGGATaGAATGGAGAAGTTTCTAGACAGATACCAGATACCAAAGTTGAA +
Preference number: 1 (lower is better)
Translates to: ILLQKAILNKTGEPG*NGEVSRQIPDTKVE
Trigger: TTCAACTTTGGTATCTGGTATCTGTCTAGAAACTTCTCCATTTCATCCAGGTTCTCCAGTTTTGTTGAGTATAGCCTTTTGTAGAAGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 90 bp TCATTCTCATCAAAGGTAAAATCCTCCAAGAGGAACTATCAATTCTaGATATCTATGCTCCAAATACAAGGGCAGCCACATTCATTAAAG +
Preference number: 1 (lower is better)
Translates to: SFSSKVKSSKRNYQF*ISMLQIQGQPHSLK
Trigger: CTTTAATGAATGTGGCTGCCCTTGTATTTGGAGCATAGATATTCAGAATTGATAGTTCCTCTTGGAGGATTTTACCTTTGATGAGAATGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp AACTCTAGAGTTAGAATATCTAAGAAAGAGATCAGGAGTCATAGATaGAAGCATCACCAACAGAACACAAAAGATAGAAGAGAGAATCTC +
Preference number: 1 (lower is better)
Translates to: NSRVRISKKEIRSHR*KHHQQNTKDRRENL
Trigger: GAGATTCTCTCTTCTATCTTTTGTGTTCTGTTGGTGATGCTTGCATCTATGACTCCTGATCTCTTTCTTAGATATTCTAACTCTAGAGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp AAAGCTCTAGAACAAAAAGAATCAAATACTCCCAAGAGGAGTAGATaGCAGGAAATAATCAAACTCAGGGCTAAAATCAACCAAAGAGAA +
Preference number: 1 (lower is better)
Translates to: KALEQKESNTPKRSR*QEIIKLRAKINQRE
Trigger: TTCTCTTTGGTTGATTTTAGCCCTGAGTTTGATTATTTCCTGCCATCTACTCCTCTTGGGAGTATTTGATTCTTTTTGTTCTAGAGCTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 90 bp CAAAGGAAATATCTACCAAGAAGAACTCTCAATTCTGAACATCTATaGTCCAAATGCAAGTGTACCCACATTCATAAAATACTTCAACAC +
Preference number: 1 (lower is better)
Translates to: QRKYLPRRTLNSEHL*SKCKCTHIHKILQH
Trigger: GTGTTGAAGTATTTTATGAATGTGGGTACACTTGCATTTGGAGCATAGATGTTCAGAATTGAGAGTTCTTCTTGGTAGATATTTCCTTTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp CGAATTGATCCATACCTATTTCCTTGTACTAAGGTCAAATCTAAGTaGATCAAGGAACTTCACATAAAACCAGAGACACTGAAACTTATA +
Preference number: 1 (lower is better)
Translates to: RIDPYLFPCTKVKSK*IKELHIKPETLKLI
Trigger: TATAAGTTTCAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGATTTGACCTTAGTACAAGGAAATAGGTATGGATCAATTCG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 90 bp TATTTCACACAGAGACAAAAGAATATACCTTCTTCTCACATCTCATaGAATGTTCTACAAAACTGGCCACAATATCAAATGCAAAGCAAG +
Preference number: 1 (lower is better)
Translates to: YFTQRQKNIPSSHIS*NVLQNWPQYQMQSK
Trigger: CTTGCTTTGCATTTGATATTGTGGCCAGTTTTGTAGAACATTCCATGAGATGTGAGAAGAAGGTATATTCTTTTGTCTCTGTGTGAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 90 bp GCTTCTGGGACAGGCAGAGGCACAGAGCCGCAGAGGCAGCACCCTTaGCGGGCCGCAGACAGACAGCCACCGTCCGGACCAGAGGACAGG +
Preference number: 2 (lower is better)
Translates to: ASGTGRGTEPQRQHP*RAADRQPPSGPEDR
Trigger: CCTGTCCTCTGGTCCGGACGGTGGCTGTCTGTCTGCGGCCCGCAAAGGGTGCTGCCTCTGCGGCTCTGTGCCTCTGCCTGTCCCAGAAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CAACATCTGTGTGGCCAGAGAGCTGGCCTGCTGCCCAAAGTCATCATCATGGGCCAGCCCCAGGAAATCTaGCTCCTGCTTCTGGCTTCC +
Preference number: 2 (lower is better)
Translates to: QHLCGQRAGLLPKVIIMGQPQEI*LLLLAS
Trigger: GGAAGCCAGAAGCAGGAGTCAGATTTCCTGGGGCTG...GCCCATGATGATGACTTTGGGCAGCAGGCCAGCTCTCTGGCCACACAGATGTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR TCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTGAGACTCTAAAACCCTaGAGTGTCCCGCCCACCTCG +
Preference number: 2 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGETLKP*SVPPTS
Trigger: CGAGGTGGGCGGGACACTTCAGGGTTTTAGAGTCTC...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp ACTGGGACAAAAGGGATCCAGAGATGCAGGAACCCCTGCTCGACCCAGTGGCTAGGGAGGGTGGGTGGGTaGAAGAACACCCTCATAGAA +
Preference number: 2 (lower is better)
Translates to: TGTKGIQRCRNPCSTQWLGRVGG*KNTLIE
Trigger: TTCTATGAGGGTGTTCTTCCACCCACCCACCCTCCC...TAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp ACTGGGACAAAAGGGATCCAGAGATGCAGGAACCCCTGCTCGACCCAGTGGCTACCAGGCTCCCACATCTaGTGGCTCACAACTACCTGT +
Preference number: 2 (lower is better)
Translates to: TGTKGIQRCRNPCSTQWLPGSHI*WLTTTC
Trigger: ACAGGTAGTTGTGAGCCACCAGATGTGGGAGCCTGG...TAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CAA 90 bp TCTCCTGAGGACACACACCTTCTCTGGAGCATCTCACACTGCCTATaGTGCTGTACCTGGTGGCCTTGCCTTAACCAGGCAGGGGTGTTC +
Preference number: 2 (lower is better)
Translates to: SPEDTHLLWSISHCL*CCTWWPCLNQAGVF
Trigger: GAACACCCCTGCCTGGTTAAGGCAAGGCCACCAGGTACAGCACAATAGGCAGTGTGAGATGCTCCAGAGAAGGTGTGTGTCCTCAGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR TCA 90 bp ACTGGGACAAAAGGGATCCAGAGATGCAGGAACCCCTGCTCGACCCAGTGGCTAAGATGGAGGAAGGACTaGGGAACACAGAAGGATAGG +
Preference number: 2 (lower is better)
Translates to: TGTKGIQRCRNPCSTQWLRWRKD*GTQKDR
Trigger: CCTATCCTTCTGTGTTCCTCAGTCCTTCCTCCATCT...TAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTGTCCAAGAGGCAGCTTaGCTCCCAGGAACTCTGAAA +
Preference number: 2 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGVQEAA*LPGTLK
Trigger: TTTCAGAGTTCCTGGGAGTCAAGCTGCCTCTTGGAC...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTCACCCTCTGTCACTGTaGTGTTTTGGTAGGGCCATG +
Preference number: 2 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGHPLSL*CFGRAM
Trigger: CATGGCCCTACCAAAACAGCACAGTGACAGAGGGTG...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp AACCCAAGAAACCCAGCACACAGAAGAAGTTGGCTCCAGAACCCTCATGGCATTCTGGATCCTGCTTCGTaGCCTGGTGACTCGGAAGGC +
Preference number: 2 (lower is better)
Translates to: NPRNPAHRRSWLQNPHGILDPAS*PGDSEG
Trigger: GCCTTCCGAGTCACCAGGCCACGAAGCAGGATCCAG...AATGCCATGAGGGTTCTGGAGCCAACTTCTTCTGTGTGCTGGGTTTCTTGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CAA 90 bp CTCAGGAGGTTGGTCAAACCAGGATCTCAGGGTCCAAGAGGCAGCTaGACTCCCAGGAACTCTGAAACACTCAGGATCTCAGGATCACAG +
Preference number: 2 (lower is better)
Translates to: LRRLVKPGSQGPRGS*TPRNSETLRISGSQ
Trigger: CTGTGATCCTGAGATCCTGAGTGTTTCAGAGTTCCTGGGAGTCAAGCTGCCTCTTGGACCCTGAGATCCTGGTTTGACCAACCTCCTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp ACTGGGACAAAAGGGATCCAGAGATGCAGGAACCCCTGCTCGACCCAGTGGCTACACCATTCTCAGGGGTaGAAAAGAGGAGAGAGAGTA +
Preference number: 2 (lower is better)
Translates to: TGTKGIQRCRNPCSTQWLHHSQG*KRGERV
Trigger: TACTCTCTCTCCTCTTTTTCACCCCTGAGAATGGTG...TAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp ACTGGGACAAAAGGGATCCAGAGATGCAGGAACCCCTGCTCGACCCAGTGGCTATGCATATGTAGCAGATaGTGGCCTTGTCAGGCATCA +
Preference number: 2 (lower is better)
Translates to: TGTKGIQRCRNPCSTQWLCICSR*WPCQAS
Trigger: TGATGCCTGACAAGGCCATCATCTGCTACATATGCA...TAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTCCAAGAAGTGCATGCTaGAAGGAGCCTGGTATGGTT +
Preference number: 2 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGPRSAC*KEPGMV
Trigger: AACCATACCAGGCTCCTTTCAGCATGCACTTCTTGG...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTGAGTGCTCTGAGCACTaGAACTCAGAGGAGAGAATC +
Preference number: 2 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGECSEH*NSEERI
Trigger: GATTCTCTCCTCTGAGTTTCAGTGCTCAGAGCACTC...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTCCAGGTGCTCTAAAATaGCCAGGATCAGAGGATCAC +
Preference number: 2 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGPGALK*PGSEDH
Trigger: GTGATCCTCTGATCCTGGGCATTTTAGAGCACCTGG...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTAGAGGCAGCACCCTTTaGGGGCCGCAGACAGACAGC +
Preference number: 2 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICRGSTL*GPQTDS
Trigger: GCTGTCTGTCTGCGGCCCGCAAAGGGTGCTGCCTCT...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp ACTGGGACAAAAGGGATCCAGAGATGCAGGAACCCCTGCTCGACCCAGTGGCTAACAAATTGTGGGGGCTaGTTTTCTTCTTCCTCCTGG +
Preference number: 2 (lower is better)
Translates to: TGTKGIQRCRNPCSTQWLTNCGG*FSSSSW
Trigger: CCAGGAGGAAGAAGAAAACCAGCCCCCACAATTTGT...TAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTATTCATGTGGGGGAGTaGGTTTGGGGAGGTGTGTAT +
Preference number: 2 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGIHVGE*VWGGVY
Trigger: ATACACACCTCCCCAAACCCACTCCCCCACATGAAT...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CAA 90 bp AATGCCCAGGATCAGAGGATCACAGGATTACAGAATCTCAGGAGGTaGGTCAAACCAGGATCTCAGGGTCCAAGAGGCAGCTTGACTCCC +
Preference number: 2 (lower is better)
Translates to: NAQDQRITGLQNLRR*VKPGSQGPRGSLTP
Trigger: GGGAGTCAAGCTGCCTCTTGGACCCTGAGATCCTGGTTTGACCAACCTCCTGAGATTCTGTAATCCTGTGATCCTCTGATCCTGGGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp ACTGGGACAAAAGGGATCCAGAGATGCAGGAACCCCTGCTCGACCCAGTGGCTAAAATCAAAACAACCCTaGGATTCCACCTCACACCAG +
Preference number: 2 (lower is better)
Translates to: TGTKGIQRCRNPCSTQWLKSKQP*DSTSHQ
Trigger: CTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTT...TAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GCCAGAAGCTGGAAAGAACCCAGATGTCTCTCAACAGAGGAATGGATACAGAAACCTCATGGCATTGGATaGCAGTGTGCCGGGGCTCTG +
Preference number: 2 (lower is better)
Translates to: ARSWKEPRCLSTEEWIQKPHGIG*QCAGAL
Trigger: CAGAGCCCCGGCACACTGTCATCCAATGCCATGAGG...TTTCTGTATCCATTCCTCTGTTGAGAGACATCTGGGTTCTTTCCAGCTTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp AGCTGGACTCTGGAGAGTTTTGGCATAACCAGGAACACAGGAAGGACAGGCTACAGCTCCACTCCCAGGTaGTCTAAAATGCCCAGGATC +
Preference number: 2 (lower is better)
Translates to: SWTLESFGITRNTGRTGYSSTPR*SKMPRI
Trigger: GATCCTGGGCATTTTAGAGCACCTGGGAGTGGAGCT...GTAGCCTGTCCTTCCTGTGTTCCTGGTTATGCCAAAACTCTCCAGAGTCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTTTTTCTTCTTCCTCCTaGTGCGTTCCAGAGGCTCAA +
Preference number: 2 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGFSSSS*CVPEAQ
Trigger: TTGAGCCTCTGGAACGCACCAGGAGGAAGAAGAAAA...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR TCA 90 bp GACAAACCCTTAGCCAGACTCACTAGAGGACACAGGGAAAGCATTCTAATTAACGTCGGGGTACCTGGCTaGACCCTGGAAGGCAGCTTT +
Preference number: 2 (lower is better)
Translates to: DKPLARLTRGHRESILINVGVPG*TLEGSF
Trigger: AAAGCTGCCTTCCAGGGTTCAGCCAGGTACCCCGAC...GTTAATTAGAATGCTTTCCCTGTGTCCTCTAGTGAGTCTGGCTAAGGGTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp ACTGGGACAAAAGGGATCCAGAGATGCAGGAACCCCTGCTCGACCCAGTGGCTATGTCAATTTCCCACATaGTCAGCAAACCTTGACAAC +
Preference number: 2 (lower is better)
Translates to: TGTKGIQRCRNPCSTQWLCQFPT*SANLDN
Trigger: GTTGTCAAGGTTTGCTGAGCATGTGGGAAATTGACA...TAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp AGCTGGACTCTGGAGAGTTTTGGCATAACCAGGAACACAGGAAGGACAGGCTACGGTTGTCTCTTGAGATaGCCTGCCAGAGCCTTACAA +
Preference number: 2 (lower is better)
Translates to: SWTLESFGITRNTGRTGYGCLLR*PARALQ
Trigger: TTGTAAGGCTCTGGCAGGGCATCTCAAGAGACAACC...GTAGCCTGTCCTTCCTGTGTTCCTGGTTATGCCAAAACTCTCCAGAGTCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GCCAGAAGCTGGAAAGAACCCAGATGTCTCTCAACAGAGGAATGGATACAGAAAGAGTGGGAGGGTGGGTaGGTGGAAGAACACCCTCAT +
Preference number: 2 (lower is better)
Translates to: ARSWKEPRCLSTEEWIQKEWEGG*VEEHPH
Trigger: ATGAGGGTGTTCTTCCACCCACCCACCCTCCCACTC...TTTCTGTATCCATTCCTCTGTTGAGAGACATCTGGGTTCTTTCCAGCTTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTATGCTGAAAGGAGCCTaGTATGGTTGTCTCTTGAGA +
Preference number: 2 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGMLKGA*YGCLLR
Trigger: TCTCAAGAGACAACCATACCAGGCTCCTTTCAGCAT...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp ACTGGGACAAAAGGGATCCAGAGATGCAGGAACCCCTGCTCGACCCAGTGGCTACCCAAGAGGAGTAGATaGCAGGAAATAATCAAACTC +
Preference number: 2 (lower is better)
Translates to: TGTKGIQRCRNPCSTQWLPKRSR*QEIIKL
Trigger: GAGTTTGATTATTTCCTGCCATCTACTCCTCTTGGG...TAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTGTGAGACTATGCCAATaGCCTAGCAAACACAGAAGT +
Preference number: 2 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGVRLCQ*PSKHRS
Trigger: ACTTCTGTGTTTGCTAGGCCATTGGCATAGTCTCAC...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTGAACCGGACAGCTTCTaGGACAGGCAGAGGCACAGA +
Preference number: 2 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICEPDSF*DRQRHR
Trigger: TCTGTGCCTCTGCCTGTCCCAGAAGCTGTCCGGTTC...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CAACATCTGTGTGGCCAGAGAGCTGGCCTGCTGCCCAAAGTCATCATCATGGGCATCCATCTGCCTGTCTaGAATAATGCATGTGTAGAG +
Preference number: 2 (lower is better)
Translates to: QHLCGQRAGLLPKVIIMGIHLPV*NNACVE
Trigger: CTCTACACATGCATTATTCCAGACAGGCAGATGGAT...GCCCATGATGATGACTTTGGGCAGCAGGCCAGCTCTCTGGCCACACAGATGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CAA 90 bp CAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTaGGTGGGATTGCAGGCTTGTACAACCACTATGGAAATCAGTCTG +
Preference number: 2 (lower is better)
Translates to: QMLAWMWRKRNTPPL*VGLQACTTTMEISL
Trigger: CAGACTGATTTCCATAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCACGCCAGCATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 90 bp CAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATaGTTGGTGGGATTGCAGGCTTGTACAACCACTATGGAAATCAGT +
Preference number: 2 (lower is better)
Translates to: QQMLAWMWRKRNTPP*LVGLQACTTTMEIS
Trigger: ACTGATTTCCATAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCACGCCAGCATCTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTAAGACAAAAACCACATaGTCATCTCGTTGGATGCTG +
Preference number: 2 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGKTKTT*SSRWML
Trigger: CAGCATCCAACGAGATGATCATGTGGTTTTTGTCTT...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CCTCATGATACTTTGCGCACTTTGGCATTGATATTTTATGGGTATGCATGTGAGTGGCTGGGGCGCAGGTaGGCAAGGAACTCAGGGAAG +
Preference number: 2 (lower is better)
Translates to: PHDTLRTLALIFYGYACEWLGRR*ARNSGK
Trigger: CTTCCCTGAGTTCCTTGCTCACCTGCGCCCCAGCCA...CTCACATGCATACCCATAAAATATCAATGCCAAAGTGCGCAAAGTATCATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp TCAGAATGGCTAAGTGCAAAAACTCAGGTGACAGCAGATGCTGCCAAGAATGTGCAAGGGGAGGAAGGATaGGATAGGGGATTTCCAGGG +
Preference number: 2 (lower is better)
Translates to: SEWLSAKTQVTADAAKNVQGEEG*DRGFPG
Trigger: CCCTGGAAATCCCCTATCCCATCCTTCCTCCCCTTG...CACATTCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCACTTAGCCATTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTCAAGGGGAGGAAGGATaGGATAGGGGATTTCCAGGG +
Preference number: 2 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICQGEEG*DRGFPG
Trigger: CCCTGGAAATCCCCTATCCCATCCTTCCTCCCCTTG...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GTGGCAGTAAGTCCACACCACAAGCCCTACACCTGCCAATTTCTCTTAAAGCACGAAAGGAGCCTGGTATaGTTGTCTCTTGAGATGCCC +
Preference number: 2 (lower is better)
Translates to: VAVSPHHKPYTCQFLLKHERSLV*LSLEMP
Trigger: GGGCATCTCAAGAGACAACCATACCAGGCTCCTTTC...GTGCTTTAAGAGAAATTGGCAGGTGTAGGGCTTGTGGTGTGGACTTACTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp ACTGGGACAAAAGGGATCCAGAGATGCAGGAACCCCTGCTCGACCCAGTGGCTAAAAACTGCATGGTATTaGTACAGAGAAAGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: TGTKGIQRCRNPCSTQWLKTAWY*YRERQE
Trigger: TTCCTGCCTTTCTCTGTACCAATACCATGCAGTTTT...TAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GTGGCAGTAAGTCCACACCACAAGCCCTACACCTGCCAATTTCTCTTAAAGCACATCGCCATTATAAGATaGCGCTGGCTTCCACTGCAC +
Preference number: 2 (lower is better)
Translates to: VAVSPHHKPYTCQFLLKHIAIIR*RWLPLH
Trigger: GTGCAGTGGAAGCCAGCGCCATCTTATAATGGCGAT...GTGCTTTAAGAGAAATTGGCAGGTGTAGGGCTTGTGGTGTGGACTTACTGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACACTTCTGGGGTCTGGCTaGGGCGCAGGTGAGCAAGGA +
Preference number: 2 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTLLGSG*GAGEQG
Trigger: TCCTTGCTCACCTGCGCCCCAGCCAGACCCCAGAAG...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp AGCTGGACTCTGGAGAGTTTTGGCATAACCAGGAACACAGGAAGGACAGGCTACAGCTTTCACTGCAGATaGAGGTGGGCACAGTTATCT +
Preference number: 2 (lower is better)
Translates to: SWTLESFGITRNTGRTGYSFHCR*RWAQLS
Trigger: AGATAACTGTGCCCACCTCCATCTGCAGTGAAAGCT...GTAGCCTGTCCTTCCTGTGTTCCTGGTTATGCCAAAACTCTCCAGAGTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CAA 90 bp TCTGGGACCTGCCAAAGCAACACAGCTTCTGAGAAAGGTCCTGTTTaGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATAT +
Preference number: 2 (lower is better)
Translates to: SGTCQSNTASEKGPV*GLLLQPGGCPNTRY
Trigger: ATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAGGACCTTTCTCAGAAGCTGTGTTGCTTTGGCAGGTCCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTTTATGGGTATGCATGTaGGGGGTATTCTTTGATTAC +
Preference number: 2 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGLWVCM*GVFFDY
Trigger: GTAATCAAAGAATACCCCTCACATGCATACCCATAA...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp ACTGGGACAAAAGGGATCCAGAGATGCAGGAACCCCTGCTCGACCCAGTGGCTAAACCAAGATAGTCCATaGCAAAACCAAACTTACACT +
Preference number: 2 (lower is better)
Translates to: TGTKGIQRCRNPCSTQWLNQDSP*QNQTYT
Trigger: AGTGTAAGTTTGGTTTTGTCATGGACTATCTTGGTT...TAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp TTGGTGGCAGGACTGCAAACTGGTAGAACTACTCTGGAAATCAGTTTGGCGGTTATAGCCCTGCTGCTGTaGTACAGAAGGCCAAATGTG +
Preference number: 2 (lower is better)
Translates to: LVAGLQTGRTTLEISLAVIALLL*YRRPNV
Trigger: CACATTTGGCCTTCTGTATCACAGCAGCAGGGCTAT...AACCGCCAAACTGATTTCCAGAGTAGTTCTACCAGTTTGCAGTCCTGCCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR TCA 90 bp AACCCAAGAAACCCAGCACACAGAAGAAGTTGGCTCCAGAACCCTCATGGCATTACATTTCTGAGGTTATaGAGCAGCTGCCAGGAATGG +
Preference number: 2 (lower is better)
Translates to: NPRNPAHRRSWLQNPHGITFLRL*SSCQEW
Trigger: CCATTCCTGGCAGCTGCTTCATAACCTCAGAAATGT...AATGCCATGAGGGTTCTGGAGCCAACTTCTTCTGTGTGCTGGGTTTCTTGGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR TCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTACAGCAAAGATGGTCTaGCGGAGGAGGCAGGTAGTA +
Preference number: 2 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICTAKMV*RRRQVV
Trigger: TACTACCTGCCTCCTCCGTCAGACCATCTTTGCTGT...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR TCA 90 bp GCCAGAAGCTGGAAAGAACCCAGATGTCTCTCAACAGAGGAATGGATACAGAAAAGCAATGAGGACCACTaGGGTAGAAGCACCAGAGCT +
Preference number: 2 (lower is better)
Translates to: ARSWKEPRCLSTEEWIQKSNEDH*GRSTRA
Trigger: AGCTCTGGTGCTTCTACCTCAGTGGTCCTCATTGCT...TTTCTGTATCCATTCCTCTGTTGAGAGACATCTGGGTTCTTTCCAGCTTCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp AGCTGGACTCTGGAGAGTTTTGGCATAACCAGGAACACAGGAAGGACAGGCTACACTCCCTCTACCATGTaGCTAGAAGGGTATCACATT +
Preference number: 2 (lower is better)
Translates to: SWTLESFGITRNTGRTGYTPSTM*LEGYHI
Trigger: AATGTGATACCCTTCTAGCCACATGGTAGAGGGAGT...GTAGCCTGTCCTTCCTGTGTTCCTGGTTATGCCAAAACTCTCCAGAGTCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GTGGCAGTAAGTCCACACCACAAGCCCTACACCTGCCAATTTCTCTTAAAGCACGATAAGAGAGACAGCTaGACTCTGGAGAGTTTTGGC +
Preference number: 2 (lower is better)
Translates to: VAVSPHHKPYTCQFLLKHDKRDS*TLESFG
Trigger: GCCAAAACTCTCCAGAGTCCAGCTGTCTCTCTTATC...GTGCTTTAAGAGAAATTGGCAGGTGTAGGGCTTGTGGTGTGGACTTACTGCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTGAAACAAAACACCCATaGAAGGAGTTACAGAGACAA +
Preference number: 2 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGETKHP*KELQRQ
Trigger: TTGTCTCTGTAACTCCTTCCATGGGTGTTTTGTTTC...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp TCAGAATGGCTAAGTGCAAAAACTCAGGTGACAGCAGATGCTGCCAAGAATGTGATACCACAGCAAAGATaGTCTGACGGAGGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: SEWLSAKTQVTADAAKNVIPQQR*SDGGGR
Trigger: CCTGCCTCCTCCGTCAGACCATCTTTGCTGTGGTAT...CACATTCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCACTTAGCCATTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CAA 90 bp GCAACATGGTCGAATTCTTTTCAACAGCTTTATTGCAGAAATGCCTaGATGCTACGGGAACCCCGGGAACCCAGGGAGGACTCCTTATAT +
Preference number: 2 (lower is better)
Translates to: ATWSNSFQQLYCRNA*MLREPREPREDSLY
Trigger: ATATAAGGAGTCCTCCCTGGGTTCCCGGGGTTCCCGTAGCATCAAGGCATTTCTGCAATAAAGCTGTTGAAAAGAATTCGACCATGTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 90 bp CTCATTTCCTGTGCAGAACTGGACACCCTCTGTCACTGTGCTGTTTaGGTAGGGCCATGTACAATCAAAGGTGAACTCCCAGAACTTCTT +
Preference number: 2 (lower is better)
Translates to: LISCAELDTLCHCAV*VGPCTIKGELPELL
Trigger: AAGAAGTTCTGGGAGTTCACCTTTGATTGTACATGGCCCTACCAAAACAGCACAGTGACAGAGGGTGTCCAGTTCTGCACAGGAAATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR TCA 90 bp GCCAGAAGCTGGAAAGAACCCAGATGTCTCTCAACAGAGGAATGGATACAGAAACCAAGAAGTGCATGCTaGAAGGAGCCTGGTATGGTT +
Preference number: 2 (lower is better)
Translates to: ARSWKEPRCLSTEEWIQKPRSAC*KEPGMV
Trigger: AACCATACCAGGCTCCTTTCAGCATGCACTTCTTGG...TTTCTGTATCCATTCCTCTGTTGAGAGACATCTGGGTTCTTTCCAGCTTCTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp AACCCAAGAAACCCAGCACACAGAAGAAGTTGGCTCCAGAACCCTCATGGCATTCAGGAATGGAAGTTGTaGGAGTTTGTACCTTTCCTC +
Preference number: 2 (lower is better)
Translates to: NPRNPAHRRSWLQNPHGIQEWKL*EFVPFL
Trigger: GAGGAAAGGTACAAACTCTCACAACTTCCATTCCTG...AATGCCATGAGGGTTCTGGAGCCAACTTCTTCTGTGTGCTGGGTTTCTTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR TCA 90 bp TCAGAATGGCTAAGTGCAAAAACTCAGGTGACAGCAGATGCTGCCAAGAATGTGAGGAGACAGCCACTGTaGATACCACAGCAAAGATGG +
Preference number: 2 (lower is better)
Translates to: SEWLSAKTQVTADAAKNVRRQPL*IPQQRW
Trigger: CCATCTTTGCTGTGGTATTCACAGTGGCTGTCTCCT...CACATTCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCACTTAGCCATTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp AGCTGGACTCTGGAGAGTTTTGGCATAACCAGGAACACAGGAAGGACAGGCTACGGTGACAGCAGATGCTaGCAAGAATGTGAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: SWTLESFGITRNTGRTGYGDSRC*QECEEK
Trigger: TTTTTCTTCACATTCTTGGCAGCATCTGCTGTCACC...GTAGCCTGTCCTTCCTGTGTTCCTGGTTATGCCAAAACTCTCCAGAGTCCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp GACAAACCCTTAGCCAGACTCACTAGAGGACACAGGGAAAGCATTCTAATTAACTGGAAAGATCTCCCATaGTCAGGGATCGGCAGGATC +
Preference number: 2 (lower is better)
Translates to: DKPLARLTRGHRESILINWKDLP*SGIGRI
Trigger: GATCCTGCCGATCCCTGAGCATGGGAGATCTTTCCA...GTTAATTAGAATGCTTTCCCTGTGTCCTCTAGTGAGTCTGGCTAAGGGTTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTTATGGTCAGGGCAAGTaGCATGTGCAGAGTGTCCAT +
Preference number: 2 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICYGQGK*HVQSVH
Trigger: ATGGACACTCTGCACATGGCACTTGCCCTGACCATA...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp CCTCATGATACTTTGCGCACTTTGGCATTGATATTTTATGGGTATGCATGTGAGGTGTGGCTCGAGTACTaGTCCTTGGGGCACAGAAGG +
Preference number: 2 (lower is better)
Translates to: PHDTLRTLALIFYGYACEVWLEY*SLGHRR
Trigger: CCTTCTGTGCCCCAAGGAGCAGTACTCGAGCCACAC...CTCACATGCATACCCATAAAATATCAATGCCAAAGTGCGCAAAGTATCATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp GTGGCAGTAAGTCCACACCACAAGCCCTACACCTGCCAATTTCTCTTAAAGCACACAACAGGTAGTAACTaGGACAAAAGGGATCCAGAG +
Preference number: 2 (lower is better)
Translates to: VAVSPHHKPYTCQFLLKHTTGSN*DKRDPE
Trigger: CTCTGGATCCCTTTTGTCCCAGTTACTACCTGTTGT...GTGCTTTAAGAGAAATTGGCAGGTGTAGGGCTTGTGGTGTGGACTTACTGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp ACACCTGCAGGAGTCTTCTTCCCTTGGAAAATGTCAAATTGTGTCACCAAATCTGTGGGGGAGTGGGTTTaGGGAGGTGTGTATCCATCT +
Preference number: 2 (lower is better)
Translates to: TPAGVFFPWKMSNCVTKSVGEWV*GGVYPS
Trigger: AGATGGATACACACCTCCCCAAACCCACTCCCCCAC...AGATTTGGTGACACAATTTGACATTTTCCAAGGGAAGAAGACTCCTGCAGGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp GACAGCACACCTGAAAGCTCTAGAACAAAAAGAATCAAATACTCCCAAGAGGAGCTGCAGACAGCTCTGTaGCCTCTGGAAGGAAACCCA +
Preference number: 2 (lower is better)
Translates to: DSTPESSRTKRIKYSQEELQTAL*PLEGNP
Trigger: TGGGTTTCCTTCCAGAGGCCACAGAGCTGTCTGCAG...CTCCTCTTGGGAGTATTTGATTCTTTTTGTTCTAGAGCTTTCAGGTGTGCTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp CCTCATGATACTTTGCGCACTTTGGCATTGATATTTTATGGGTATGCATGTGAGGGGTCAACATCTGTGTaGCCAGAGAGCTGGCCTGCT +
Preference number: 2 (lower is better)
Translates to: PHDTLRTLALIFYGYACEGSTSV*PESWPA
Trigger: AGCAGGCCAGCTCTCTGGCCACACAGATGTTGACCC...CTCACATGCATACCCATAAAATATCAATGCCAAAGTGCGCAAAGTATCATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR TCA 90 bp GACAAACCCTTAGCCAGACTCACTAGAGGACACAGGGAAAGCATTCTAATTAACGTGCAAAAACTCAGGTaGCAGCAGATGCTGCCAAGA +
Preference number: 2 (lower is better)
Translates to: DKPLARLTRGHRESILINVQKLR*QQMLPR
Trigger: TCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCAC...GTTAATTAGAATGCTTTCCCTGTGTCCTCTAGTGAGTCTGGCTAAGGGTTTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GTGGCAGTAAGTCCACACCACAAGCCCTACACCTGCCAATTTCTCTTAAAGCACAATGATCATTCTCCATaGTCAAGTAGGCTTCATCCC +
Preference number: 2 (lower is better)
Translates to: VAVSPHHKPYTCQFLLKHNDHSP*SSRLHP
Trigger: GGGATGAAGCCTACTTGATCATGGAGAATGATCATT...GTGCTTTAAGAGAAATTGGCAGGTGTAGGGCTTGTGGTGTGGACTTACTGCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GCCAGAAGCTGGAAAGAACCCAGATGTCTCTCAACAGAGGAATGGATACAGAAACAATATGAGAGTAGATaGGATCCAGGACTCAGGAGC +
Preference number: 2 (lower is better)
Translates to: ARSWKEPRCLSTEEWIQKQYESR*DPGLRS
Trigger: GCTCCTGAGTCCTGGATCTCATCTACTCTCATATTG...TTTCTGTATCCATTCCTCTGTTGAGAGACATCTGGGTTCTTTCCAGCTTCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR TCA 90 bp CCTGCATACACATGGAAGATGATCAATGCCCTGCTCAATGATAACTTGGTCAAAGGAACTTGGTCTCATTaGAGACATCTGGAAGGCCCC +
Preference number: 2 (lower is better)
Translates to: PAYTWKMINALLNDNLVKGTWSH*RHLEGP
Trigger: GGGGCCTTCCAGATGTCTTCAATGAGACCAAGTTCC...TTTGACCAAGTTATCATTGAGCAGGGCATTGATCATCTTCCATGTGTATGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp AAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCAGCTCCACTCCCAGGTaGTCTAAAATGCCCAGGATC +
Preference number: 2 (lower is better)
Translates to: KGAKTIQWKKDSIFNKWCSSTPR*SKMPRI
Trigger: GATCCTGGGCATTTTAGAGCACCTGGGAGTGGAGCT...GCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp CCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACTAAGAGAGCTGGCCTGCTaGCCAAAGTCATCATCATGG +
Preference number: 2 (lower is better)
Translates to: PDAPQQRNGYRKCGTFTLRELAC*PKSSSW
Trigger: CCATGATGATGACTTTGGGCAGCAGGCCAGCTCTCT...TAGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp CCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACTACAGCTCTGTGGCCTCTaGAAGGAAACCCACAACCAT +
Preference number: 2 (lower is better)
Translates to: PDAPQQRNGYRKCGTFTLQLCGL*KETHNH
Trigger: ATGGTTGTGGGTTTCCTTCCAGAGGCCACAGAGCTG...TAGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR TCA 90 bp GACAAACCCTTAGCCAGACTCACTAGAGGACACAGGGAAAGCATTCTAATTAACCACCATTCTCAGGGGTaGAAAAGAGGAGAGAGAGTA +
Preference number: 2 (lower is better)
Translates to: DKPLARLTRGHRESILINHHSQG*KRGERV
Trigger: TACTCTCTCTCCTCTTTTTCACCCCTGAGAATGGTG...GTTAATTAGAATGCTTTCCCTGTGTCCTCTAGTGAGTCTGGCTAAGGGTTTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GACAGCACACCTGAAAGCTCTAGAACAAAAAGAATCAAATACTCCCAAGAGGAGAGATGGAGGAAGGACTaGGGAACACAGAAGGATAGG +
Preference number: 2 (lower is better)
Translates to: DSTPESSRTKRIKYSQEERWRKD*GTQKDR
Trigger: CCTATCCTTCTGTGTTCCTCAGTCCTTCCTCCATCT...CTCCTCTTGGGAGTATTTGATTCTTTTTGTTCTAGAGCTTTCAGGTGTGCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GACAAACCCTTAGCCAGACTCACTAGAGGACACAGGGAAAGCATTCTAATTAACTGCATATGTAGCAGATaGTGGCCTTGTCAGGCATCA +
Preference number: 2 (lower is better)
Translates to: DKPLARLTRGHRESILINCICSR*WPCQAS
Trigger: TGATGCCTGACAAGGCCATCATCTGCTACATATGCA...GTTAATTAGAATGCTTTCCCTGTGTCCTCTAGTGAGTCTGGCTAAGGGTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CCTGCATACACATGGAAGATGATCAATGCCCTGCTCAATGATAACTTGGTCAAAGTGCAAAAACTCAGGTaGCAGCAGATGCTGCCAAGA +
Preference number: 2 (lower is better)
Translates to: PAYTWKMINALLNDNLVKVQKLR*QQMLPR
Trigger: TCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCAC...TTTGACCAAGTTATCATTGAGCAGGGCATTGATCATCTTCCATGTGTATGCAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp TCAGAATGGCTAAGTGCAAAAACTCAGGTGACAGCAGATGCTGCCAAGAATGTGAAATCAAAACAACCCTaGGATTCCACCTCACACCAG +
Preference number: 2 (lower is better)
Translates to: SEWLSAKTQVTADAAKNVKSKQP*DSTSHQ
Trigger: CTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGATTT...CACATTCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCACTTAGCCATTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CAACCAAAAGTTATCAAAAAGGATAAGGAAGGACACTTCAGACGGGTCAAAGGAAGGAATCACCATCCCTaGCCTCAAGCTGTACCACAG +
Preference number: 2 (lower is better)
Translates to: QPKVIKKDKEGHFRRVKGRNHHP*PQAVPQ
Trigger: CTGTGGTACAGCTTGAGGTCAGGGATGGTGATTCCT...TCCTTTGACCCGTCTGAAGTGTCCTTCCTTATCCTTTTTGATAACTTTTGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTATAGGTGGAACAATATaGACTAAGCAGTACCCCGGA +
Preference number: 2 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICIGGTI*TKQYPG
Trigger: TCCGGGGTACTGCTTAGTTCATATTGTTCCACCTAT...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GGTGTGTCACCTAACTTCCCTATTTTCTTCTGTATAAAAACTTTGATGCTGAGTGCAGAGTGTCCATGCTaGCCCACACCTGTCCTGAGA +
Preference number: 2 (lower is better)
Translates to: GVSPNFPIFFCIKTLMLSAECPC*PTPVLR
Trigger: TCTCAGGACAGGTGTGGGTCAGCATGGACACTCTGC...ACTCAGCATCAAAGTTTTTATACAGAAGAAAATAGGGAAGTTAGGTGACACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp CCTCATGATACTTTGCGCACTTTGGCATTGATATTTTATGGGTATGCATGTGAGGCTGACCAAAACAGATaGAGAGACTCACAGCCGAGC +
Preference number: 2 (lower is better)
Translates to: PHDTLRTLALIFYGYACEADQNR*RDSQPS
Trigger: GCTCGGCTGTGAGTCTCTGCATCTGTTTTGGTCAGC...CTCACATGCATACCCATAAAATATCAATGCCAAAGTGCGCAAAGTATCATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACAGCTGACCAAAACAGATaGAGAGACTCACAGCCGAGC +
Preference number: 2 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTADQNR*RDSQPS
Trigger: GCTCGGCTGTGAGTCTCTGCATCTGTTTTGGTCAGC...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp AAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCGGTTGTCTCTTGAGATaGCCTGCCAGAGCCTTACAA +
Preference number: 2 (lower is better)
Translates to: KGAKTIQWKKDSIFNKWCGCLLR*PARALQ
Trigger: TTGTAAGGCTCTGGCAGGGCATCTCAAGAGACAACC...GCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACACTAGTCGGCCATCACTaGAAAGAGAGGCCCATTGGA +
Preference number: 2 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTLVGHH*KERPIG
Trigger: TCCAATGGGCCTCTCTTTGCAGTGATGGCCGACTAG...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp GTGGCAGTAAGTCCACACCACAAGCCCTACACCTGCCAATTTCTCTTAAAGCACGCTCTTGTCTCTAGCTaGATATGTATCAAAAGATGG +
Preference number: 2 (lower is better)
Translates to: VAVSPHHKPYTCQFLLKHALVSS*ICIKRW
Trigger: CCATCTTTTGATACATATGCAGCTAGAGACAAGAGC...GTGCTTTAAGAGAAATTGGCAGGTGTAGGGCTTGTGGTGTGGACTTACTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp ACACCTGCAGGAGTCTTCTTCCCTTGGAAAATGTCAAATTGTGTCACCAAATCTGAAGGTGATACTCAATaGACACACCAGCTGGGGTCA +
Preference number: 2 (lower is better)
Translates to: TPAGVFFPWKMSNCVTKSEGDTQ*THQLGS
Trigger: TGACCCCAGCTGGTGTGTGCATTGAGTATCACCTTC...AGATTTGGTGACACAATTTGACATTTTCCAAGGGAAGAAGACTCCTGCAGGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp TCAGAATGGCTAAGTGCAAAAACTCAGGTGACAGCAGATGCTGCCAAGAATGTGACTCCCTCTACCATGTaGCTAGAAGGGTATCACATT +
Preference number: 2 (lower is better)
Translates to: SEWLSAKTQVTADAAKNVTPSTM*LEGYHI
Trigger: AATGTGATACCCTTCTAGCCACATGGTAGAGGGAGT...CACATTCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCACTTAGCCATTCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GACAAACCCTTAGCCAGACTCACTAGAGGACACAGGGAAAGCATTCTAATTAACATCGCATGCGTGCCATaGGCAATCGCCATTATAAGA +
Preference number: 2 (lower is better)
Translates to: DKPLARLTRGHRESILINIACVP*AIAIIR
Trigger: TCTTATAATGGCGATTGCCCATGGCACGCATGCGAT...GTTAATTAGAATGCTTTCCCTGTGTCCTCTAGTGAGTCTGGCTAAGGGTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp ATGAAAGTGGTTCTAAAAGGCAGATTCATAGATAGGACTGAGTGCCTACCCTTACAGTCAGCTATTGAATaGACCACAGGGCCCCCAATG +
Preference number: 2 (lower is better)
Translates to: MKVVLKGRFIDRTECLPLQSAIE*TTGPPM
Trigger: CATTGGGGGCCCTGTGGTCCATTCAATAGCTGACTG...TAAGGGTAGGCACTCAGTCCTATCTATGAATCTGCCTTTTAGAACCACTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACAGAAGCTGACAGCTTCTaGGACCTGCCAAAGCAACAC +
Preference number: 2 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTEADSF*DLPKQH
Trigger: GTGTTGCTTTGGCAGGTCCCAGAAGCTGTCAGCTTC...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GACAGCACACCTGAAAGCTCTAGAACAAAAAGAATCAAATACTCCCAAGAGGAGGTACCTTTCCTCTCCTaGTGCTCACAGGCTAGCATA +
Preference number: 2 (lower is better)
Translates to: DSTPESSRTKRIKYSQEEVPFLS*CSQASI
Trigger: TATGCTAGCCTGTGAGCACCAGGAGAGGAAAGGTAC...CTCCTCTTGGGAGTATTTGATTCTTTTTGTTCTAGAGCTTTCAGGTGTGCTGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp CCTGCATACACATGGAAGATGATCAATGCCCTGCTCAATGATAACTTGGTCAAACCTACATGCACCAAGTaGAATACACCTGCAGGAGTC +
Preference number: 2 (lower is better)
Translates to: PAYTWKMINALLNDNLVKPTCTK*NTPAGV
Trigger: GACTCCTGCAGGTGTATTCCACTTGGTGCATGTAGG...TTTGACCAAGTTATCATTGAGCAGGGCATTGATCATCTTCCATGTGTATGCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR TCA 90 bp AAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCGTATCACATTCGAGTTaGCATGCTCACTGGCAAGCA +
Preference number: 2 (lower is better)
Translates to: KGAKTIQWKKDSIFNKWCVSHSS*HAHWQA
Trigger: TGCTTGCCAGTGAGCATGTCAACTCGAATGTGATAC...GCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp TTGGTGGCAGGACTGCAAACTGGTAGAACTACTCTGGAAATCAGTTTGGCGGTTTTATGGGTATGCATGTaGGGGGTATTCTTTGATTAC +
Preference number: 2 (lower is better)
Translates to: LVAGLQTGRTTLEISLAVLWVCM*GVFFDY
Trigger: GTAATCAAAGAATACCCCTCACATGCATACCCATAA...AACCGCCAAACTGATTTCCAGAGTAGTTCTACCAGTTTGCAGTCCTGCCACCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTAATGATCATTCTCCATaGTCAAGTAGGCTTCATCCC +
Preference number: 2 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICNDHSP*SSRLHP
Trigger: GGGATGAAGCCTACTTGATCATGGAGAATGATCATT...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTAAGACAAAAACCACATaGTCATCTCGTTGGATGCTG +
Preference number: 2 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICKTKTT*SSRWML
Trigger: CAGCATCCAACGAGATGATCATGTGGTTTTTGTCTT...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp ACACCTGCAGGAGTCTTCTTCCCTTGGAAAATGTCAAATTGTGTCACCAAATCTCATCATGGGCAAGAATaGTCACCCAGGACCATTGAA +
Preference number: 2 (lower is better)
Translates to: TPAGVFFPWKMSNCVTKSHHGQE*SPRTIE
Trigger: TTCAATGGTCCTGGGTGATCATTCTTGCCCATGATG...AGATTTGGTGACACAATTTGACATTTTCCAAGGGAAGAAGACTCCTGCAGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR TCA 90 bp GACAGCACACCTGAAAGCTCTAGAACAAAAAGAATCAAATACTCCCAAGAGGAGTTTCCTGAAGAGGCTTaGGGGTCTATCAAGCCTACA +
Preference number: 2 (lower is better)
Translates to: DSTPESSRTKRIKYSQEEFPEEA*GSIKPT
Trigger: TGTAGGCTTGATAGACCCTCAAGCCTCTTCAGGAAA...CTCCTCTTGGGAGTATTTGATTCTTTTTGTTCTAGAGCTTTCAGGTGTGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp AAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCGCTTCATCCCAGGAATaGAGGGGTGGTTCAATATAC +
Preference number: 2 (lower is better)
Translates to: KGAKTIQWKKDSIFNKWCASSQE*RGGSIY
Trigger: GTATATTGAACCACCCCTGCATTCCTGGGATGAAGC...GCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTATCAGGAGTCATAGATaGAAGCATCACCAACAGAAC +
Preference number: 2 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICIRSHR*KHHQQN
Trigger: GTTCTGTTGGTGATGCTTGCATCTATGACTCCTGAT...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp ATGAAAGTGGTTCTAAAAGGCAGATTCATAGATAGGACTGAGTGCCTACCCTTACCAGGTGCTCTAAAATaGCCAGGATCAGAGGATCAC +
Preference number: 2 (lower is better)
Translates to: MKVVLKGRFIDRTECLPLPGALK*PGSEDH
Trigger: GTGATCCTCTGATCCTGGGCATTTTAGAGCACCTGG...TAAGGGTAGGCACTCAGTCCTATCTATGAATCTGCCTTTTAGAACCACTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACACCTTTCCTCTCCTGGTaGTCACAGGCTAGCATATTG +
Preference number: 2 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTPFLSW*SQASIL
Trigger: CAATATGCTAGCCTGTGAGCACCAGGAGAGGAAAGG...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp GACAGCACACCTGAAAGCTCTAGAACAAAAAGAATCAAATACTCCCAAGAGGAGCATTGGACTGAGCACTaGGTCCCCAATAGAGGAATT +
Preference number: 2 (lower is better)
Translates to: DSTPESSRTKRIKYSQEEHWTEH*VPNRGI
Trigger: AATTCCTCTATTGGGGACCCAGTGCTCAGTCCAATG...CTCCTCTTGGGAGTATTTGATTCTTTTTGTTCTAGAGCTTTCAGGTGTGCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTCCCAAGAGGAGTAGATaGCAGGAAATAATCAAACTC +
Preference number: 2 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICPKRSR*QEIIKL
Trigger: GAGTTTGATTATTTCCTGCCATCTACTCCTCTTGGG...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp AGCTGGACTCTGGAGAGTTTTGGCATAACCAGGAACACAGGAAGGACAGGCTACAATCCAACCCTACAATaGATAATAGATGGAAAACAC +
Preference number: 2 (lower is better)
Translates to: SWTLESFGITRNTGRTGYNPTLQ*IIDGKH
Trigger: GTGTTTTCCATCTATTATCCATTGTAGGGTTGGATT...GTAGCCTGTCCTTCCTGTGTTCCTGGTTATGCCAAAACTCTCCAGAGTCCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTCAAAGAGAGGCCCATTaGACTTGCCAACTTTTTATG +
Preference number: 2 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICQREAH*TCQLFM
Trigger: CATAAAAAGTTGGCAAGTCCAATGGGCCTCTCTTTG...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAGCACACAGAAGAAGTTaGCTCCAGAACCCTCATGGC +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRAHRRS*LQNPHG
Trigger: GCCATGAGGGTTCTGGAGCCAACTTCTTCTGTGTGC...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CAA 90 bp TTCAAGTCCGAGTGGATCAAGGACCTCCACATAAAACCAGATATGTaGAAACTTAAAGAAGAGAAAGTGGGGAAGAGCCTCGAACACATG +
Preference number: 2 (lower is better)
Translates to: FKSEWIKDLHIKPDM*KLKEEKVGKSLEHM
Trigger: CATGTGTTCGAGGCTCTTCCCCACTTTCTCTTCTTTAAGTTTCAACATATCTGGTTTTATGTGGAGGTCCTTGATCCACTCGGACTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp TCAGAATGGCTAAGTGCAAAAACTCAGGTGACAGCAGATGCTGCCAAGAATGTGCCTAAGTATCTCACTTaGTCTGTCTTTCAGATACCT +
Preference number: 2 (lower is better)
Translates to: SEWLSAKTQVTADAAKNVPKYLT*SVFQIP
Trigger: AGGTATCTGAAAGACAGATCAAGTGAGATACTTAGG...CACATTCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCACTTAGCCATTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGGGTTCTAGAGGCCCCTaGGGCAACATTAGCACCCAA +
Preference number: 2 (lower is better)
Translates to: VTFRIASSITLSLRIKAKGSRGP*GNISTQ
Trigger: TTGGGTGCTAATGTTGCCTCAGGGGCCTCTAGAACC...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGTTCACAGTCAGCTATTaGATGGACCACAGGGCCCCC +
Preference number: 2 (lower is better)
Translates to: VTFRIASSITLSLRIKAKFTVSY*MDHRAP
Trigger: GGGGGCCCTGTGGTCCATTCAATAGCTGACTGTGAA...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp TCAGAATGGCTAAGTGCAAAAACTCAGGTGACAGCAGATGCTGCCAAGAATGTGAGCAAGCTAAAGGTCTaGTTTGAATGTCAGAAGGAT +
Preference number: 2 (lower is better)
Translates to: SEWLSAKTQVTADAAKNVSKLKV*FECQKD
Trigger: ATCCTTCTGACATTCAAATCAGACCTTTAGCTTGCT...CACATTCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCACTTAGCCATTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR TCA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGTTCTGTTGTTGGCCCTaGCCACAGGTGTATCCCGGT +
Preference number: 2 (lower is better)
Translates to: VTFRIASSITLSLRIKAKFCCWP*PQVYPG
Trigger: ACCGGGATACACCTGTGGTCAGGGCCAACAACAGAA...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp GACAGCACACCTGAAAGCTCTAGAACAAAAAGAATCAAATACTCCCAAGAGGAGTCTCTTGAGATGCCCTaGCAGAGCCTTACAAATACA +
Preference number: 2 (lower is better)
Translates to: DSTPESSRTKRIKYSQEESLEMP*QSLTNT
Trigger: TGTATTTGTAAGGCTCTGGCAGGGCATCTCAAGAGA...CTCCTCTTGGGAGTATTTGATTCTTTTTGTTCTAGAGCTTTCAGGTGTGCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp GTGGCAGTAAGTCCACACCACAAGCCCTACACCTGCCAATTTCTCTTAAAGCACAATCTACAGATTCAATaGAATCCCCATCAAAATTCC +
Preference number: 2 (lower is better)
Translates to: VAVSPHHKPYTCQFLLKHNLQIQ*NPHQNS
Trigger: GGAATTTTGATGGGGATTGCATTGAATCTGTAGATT...GTGCTTTAAGAGAAATTGGCAGGTGTAGGGCTTGTGGTGTGGACTTACTGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTACTCATAGCTCTGAGTaGCTCCAAAAAGAAACTAGA +
Preference number: 2 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICTHSSE*LQKETR
Trigger: TCTAGTTTCTTTTTGGAGGCACTCAGAGCTATGAGT...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp CCTGCATACACATGGAAGATGATCAATGCCCTGCTCAATGATAACTTGGTCAAAGTCTGTCCTTCCCACTaGCCATTCCTACATTTGTTT +
Preference number: 2 (lower is better)
Translates to: PAYTWKMINALLNDNLVKVCPSH*PFLHLF
Trigger: AAACAAATGTAGGAATGGGCAGTGGGAAGGACAGAC...TTTGACCAAGTTATCATTGAGCAGGGCATTGATCATCTTCCATGTGTATGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp CAAGCTGTACCACAGAGCAATACTGATAAAACAAACAAACAAACAAAAACTGCACAGCTTCCCAATCACTaGAGACAGCTCTGTGGCCTC +
Preference number: 2 (lower is better)
Translates to: QAVPQSNTDKTNKQTKTAQLPNH*RQLCGL
Trigger: GAGGCCACAGAGCTGTCTGCAGTGATTGGGAAGCTG...TGCAGTTTTTGTTTGTTTGTTTGTTTTATCAGTATTGCTCTGTGGTACAGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp ATGAAAGTGGTTCTAAAAGGCAGATTCATAGATAGGACTGAGTGCCTACCCTTAAGGAAATCTGACTCCTaGTTCTGGCTTCCTCTCATG +
Preference number: 2 (lower is better)
Translates to: MKVVLKGRFIDRTECLPLRKSDS*FWLPLM
Trigger: CATGAGAGGAAGCCAGAAGCAGGAGTCAGATTTCCT...TAAGGGTAGGCACTCAGTCCTATCTATGAATCTGCCTTTTAGAACCACTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp ACACCTGCAGGAGTCTTCTTCCCTTGGAAAATGTCAAATTGTGTCACCAAATCTCTGGCTGTACATTTCTaGATCTTCTGGACAGTCTCT +
Preference number: 2 (lower is better)
Translates to: TPAGVFFPWKMSNCVTKSLAVHF*IFWTVS
Trigger: AGAGACTGTCCAGAAGATGCAGAAATGTACAGCCAG...AGATTTGGTGACACAATTTGACATTTTCCAAGGGAAGAAGACTCCTGCAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp CAAGCTGTACCACAGAGCAATACTGATAAAACAAACAAACAAACAAAAACTGCAAGGGCAAGTGCCATGTaGAGAGTGTCCATGCTGACC +
Preference number: 2 (lower is better)
Translates to: QAVPQSNTDKTNKQTKTARASAM*RVSMLT
Trigger: GGTCAGCATGGACACTCTGCACATGGCACTTGCCCT...TGCAGTTTTTGTTTGTTTGTTTGTTTTATCAGTATTGCTCTGTGGTACAGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp CAACCAAAAGTTATCAAAAAGGATAAGGAAGGACACTTCAGACGGGTCAAAGGACAAGTGGAATACACCTaGAGGAGTCTTCTTCCCTTG +
Preference number: 2 (lower is better)
Translates to: QPKVIKKDKEGHFRRVKGQVEYT*RSLLPL
Trigger: CAAGGGAAGAAGACTCCTGCAGGTGTATTCCACTTG...TCCTTTGACCCGTCTGAAGTGTCCTTCCTTATCCTTTTTGATAACTTTTGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp GCCAGAAGCTGGAAAGAACCCAGATGTCTCTCAACAGAGGAATGGATACAGAAAAGCTTAATCTTCACGTaGGTCACTCAACAAATGAAG +
Preference number: 2 (lower is better)
Translates to: ARSWKEPRCLSTEEWIQKSLIFT*VTQQMK
Trigger: CTTCATTTGTTGAGTGACCCACGTGAAGATTAAGCT...TTTCTGTATCCATTCCTCTGTTGAGAGACATCTGGGTTCTTTCCAGCTTCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp TCAGAATGGCTAAGTGCAAAAACTCAGGTGACAGCAGATGCTGCCAAGAATGTGCTCTCAACAGAGGAATaGATACAGAAAATGTGGTAC +
Preference number: 2 (lower is better)
Translates to: SEWLSAKTQVTADAAKNVLSTEE*IQKMWY
Trigger: GTACCACATTTTCTGTATCCATTCCTCTGTTGAGAG...CACATTCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCACTTAGCCATTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTTGGTCCTGTTTCAACTaGCAGTTAGCATGTAGAAAT +
Preference number: 2 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICWSCFN*QLACRN
Trigger: ATTTCTACATGCTAACTGCCAGTTGAAACAGGACCA...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GTGGCAGTAAGTCCACACCACAAGCCCTACACCTGCCAATTTCTCTTAAAGCACAATCCAACCCTACAATaGATAATAGATGGAAAACAC +
Preference number: 2 (lower is better)
Translates to: VAVSPHHKPYTCQFLLKHNPTLQ*IIDGKH
Trigger: GTGTTTTCCATCTATTATCCATTGTAGGGTTGGATT...GTGCTTTAAGAGAAATTGGCAGGTGTAGGGCTTGTGGTGTGGACTTACTGCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTGCTCTACACAAAGGACACAGCAGATGCTGGCGTaGATGTGGAGAAAGAGGAAC +
Preference number: 2 (lower is better)
Translates to: LDIKLTQTSQWPCSTQRTQQMLA*MWRKRN
Trigger: GTTCCTCTTTCTCCACATCCACGCCAGCATCTGCTG...TGTCCTTTGTGTAGAGCAAGGCCATTGACTTGTTTGAGTTAATTTTATATCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GTGGCAGTAAGTCCACACCACAAGCCCTACACCTGCCAATTTCTCTTAAAGCACAAGGTCAAATCTAAGTaGATCAAGGAACTTCACATA +
Preference number: 2 (lower is better)
Translates to: VAVSPHHKPYTCQFLLKHKVKSK*IKELHI
Trigger: TATGTGAAGTTCCTTGATCCACTTAGATTTGACCTT...GTGCTTTAAGAGAAATTGGCAGGTGTAGGGCTTGTGGTGTGGACTTACTGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGATCTGACTCCTGCTTCTaGCTTCCTCTCATGCCTGTT +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRSDSCF*LPLMPV
Trigger: AACAGGCATGAGAGGAAGCCAGAAGCAGGAGTCAGA...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp CCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACTAGGTCCGAATGAAGGATaGAAACTGGATCTTGTCACT +
Preference number: 2 (lower is better)
Translates to: PDAPQQRNGYRKCGTFTLGPNEG*KLDLVT
Trigger: AGTGACAAGATCCAGTTTCCATCCTTCATTCGGACC...TAGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp TTGGTGGCAGGACTGCAAACTGGTAGAACTACTCTGGAAATCAGTTTGGCGGTTCCATGTAGGATGAGCTaGAAATTTGAATTGCTTAAG +
Preference number: 2 (lower is better)
Translates to: LVAGLQTGRTTLEISLAVPCRMS*KFELLK
Trigger: CTTAAGCAATTCAAATTTCCAGCTCATCCTACATGG...AACCGCCAAACTGATTTCCAGAGTAGTTCTACCAGTTTGCAGTCCTGCCACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CAA 90 bp GGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGCGCTGTAAGATaGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGC +
Preference number: 2 (lower is better)
Translates to: GEKFLNRTAMACAVR*RIDKWDLMKLQSFC
Trigger: GCAGAAACTTTGGAGTTTCATTAGGTCCCATTTGTCAATTCTCAATCTTACAGCGCAAGCCATTGCTGTTCTGTTCAGGAATTTTTCCCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 90 bp ACAGGGACAGCCAGTAAGCCATGTAGGATGAGCTGGAAATTTGAATaGCTTAAGAAAACCAAAACAACTCTGGCTGTACATTTCTGCATC +
Preference number: 2 (lower is better)
Translates to: TGTASKPCRMSWKFE*LKKTKTTLAVHFCI
Trigger: GATGCAGAAATGTACAGCCAGAGTTGTTTTGGTTTTCTTAAGCAATTCAAATTTCCAGCTCATCCTACATGGCTTACTGGCTGTCCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR TCA 90 bp GACAAACCCTTAGCCAGACTCACTAGAGGACACAGGGAAAGCATTCTAATTAACCCTAAGTATCTCACTTaGTCTGTCTTTCAGATACCT +
Preference number: 2 (lower is better)
Translates to: DKPLARLTRGHRESILINPKYLT*SVFQIP
Trigger: AGGTATCTGAAAGACAGATCAAGTGAGATACTTAGG...GTTAATTAGAATGCTTTCCCTGTGTCCTCTAGTGAGTCTGGCTAAGGGTTTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GCCAGAAGCTGGAAAGAACCCAGATGTCTCTCAACAGAGGAATGGATACAGAAAAAACTGGTGAAAGAATaGAATAAACCACTCAGTACC +
Preference number: 2 (lower is better)
Translates to: ARSWKEPRCLSTEEWIQKKLVKE*NKPLST
Trigger: GGTACTGAGTGGTTTATTTCATTCTTTCACCAGTTT...TTTCTGTATCCATTCCTCTGTTGAGAGACATCTGGGTTCTTTCCAGCTTCTGGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CCTGCATACACATGGAAGATGATCAATGCCCTGCTCAATGATAACTTGGTCAAAAACTCACAGACCACATaGATCTCAAGAAGGAATACC +
Preference number: 2 (lower is better)
Translates to: PAYTWKMINALLNDNLVKNSQTT*ISRRNT
Trigger: GGTATTCCTTCTTGAGATTCATGTGGTCTGTGAGTT...TTTGACCAAGTTATCATTGAGCAGGGCATTGATCATCTTCCATGTGTATGCAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGAGGAATCACCATCCCTaGCCTCAAGCTGTACCACAG +
Preference number: 2 (lower is better)
Translates to: VTFRIASSITLSLRIKAKRNHHP*PQAVPQ
Trigger: CTGTGGTACAGCTTGAGGTCAGGGATGGTGATTCCT...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTGCTCTACACAAAGGACAGATCAAAAATTCAGGTaGCAGCAGATGCTGGCGTGG +
Preference number: 2 (lower is better)
Translates to: LDIKLTQTSQWPCSTQRTDQKFR*QQMLAW
Trigger: CCACGCCAGCATCTGCTGTCACCTGAATTTTTGATC...TGTCCTTTGTGTAGAGCAAGGCCATTGACTTGTTTGAGTTAATTTTATATCCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp CCTGCATACACATGGAAGATGATCAATGCCCTGCTCAATGATAACTTGGTCAAATGTAATAAGGACACATaGTCCACTATGTCCACAGCA +
Preference number: 2 (lower is better)
Translates to: PAYTWKMINALLNDNLVKCNKDT*STMSTA
Trigger: TGCTGTGGACATAGTGGAGCATGTGTCCTTATTACA...TTTGACCAAGTTATCATTGAGCAGGGCATTGATCATCTTCCATGTGTATGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp ATGAAAGTGGTTCTAAAAGGCAGATTCATAGATAGGACTGAGTGCCTACCCTTAGTCAGAATGGCTAAGTaGAAAAACTCAGGTGACAGC +
Preference number: 2 (lower is better)
Translates to: MKVVLKGRFIDRTECLPLVRMAK*KNSGDS
Trigger: GCTGTCACCTGAGTTTTTGCACTTAGCCATTCTGAC...TAAGGGTAGGCACTCAGTCCTATCTATGAATCTGCCTTTTAGAACCACTTTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAGCTTCATCCCAGGAATaGAGGGGTGGTTCAATATAC +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRASSQE*RGGSIY
Trigger: GTATATTGAACCACCCCTGCATTCCTGGGATGAAGC...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTAATTCTGAACATCTATaGTCCAAATGCAAGTGTACC +
Preference number: 2 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICNSEHL*SKCKCT
Trigger: GGTACACTTGCATTTGGAGCATAGATGTTCAGAATT...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp AAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCACAAGTCAATGGCCTTaGTCTACACAAAGGACAAAC +
Preference number: 2 (lower is better)
Translates to: KGAKTIQWKKDSIFNKWCTSQWP*STQRTN
Trigger: GTTTGTCCTTTGTGTAGAGCAAGGCCATTGACTTGT...GCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp CAACCAAAAGTTATCAAAAAGGATAAGGAAGGACACTTCAGACGGGTCAAAGGAGCCTGTCTATCCATCTaGCTGTCTGGAATAATGCAT +
Preference number: 2 (lower is better)
Translates to: QPKVIKKDKEGHFRRVKGACLSI*LSGIMH
Trigger: ATGCATTATTCCAGACAGGCAGATGGATAGACAGGC...TCCTTTGACCCGTCTGAAGTGTCCTTCCTTATCCTTTTTGATAACTTTTGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp GGTGTGTCACCTAACTTCCCTATTTTCTTCTGTATAAAAACTTTGATGCTGAGTAGGCCAAATGTGCCTTaGAACACCTGGGAAATGCCT +
Preference number: 2 (lower is better)
Translates to: GVSPNFPIFFCIKTLMLSRPNVP*NTWEMP
Trigger: AGGCATTTCCCAGGTGTTGCAAGGCACATTTGGCCT...ACTCAGCATCAAAGTTTTTATACAGAAGAAAATAGGGAAGTTAGGTGACACACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp CCTGCATACACATGGAAGATGATCAATGCCCTGCTCAATGATAACTTGGTCAAATCTATCAAGCCTACATaGACCAAGTGGAATACACCT +
Preference number: 2 (lower is better)
Translates to: PAYTWKMINALLNDNLVKSIKPT*TKWNTP
Trigger: AGGTGTATTCCACTTGGTGCATGTAGGCTTGATAGA...TTTGACCAAGTTATCATTGAGCAGGGCATTGATCATCTTCCATGTGTATGCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp GACAGCACACCTGAAAGCTCTAGAACAAAAAGAATCAAATACTCCCAAGAGGAGCTTGTTTGGACTTGGTaGGAGAGGATATATCTAGTC +
Preference number: 2 (lower is better)
Translates to: DSTPESSRTKRIKYSQEELVWTW*ERIYLV
Trigger: GACTAGATATATCCTCTCCCACCAAGTCCAAACAAG...CTCCTCTTGGGAGTATTTGATTCTTTTTGTTCTAGAGCTTTCAGGTGTGCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp ACACCTGCAGGAGTCTTCTTCCCTTGGAAAATGTCAAATTGTGTCACCAAATCTGGTCTTGTTTGGACTTaGTGGGAGAGGATATATCTA +
Preference number: 2 (lower is better)
Translates to: TPAGVFFPWKMSNCVTKSGLVWT*WERIYL
Trigger: TAGATATATCCTCTCCCACCAAGTCCAAACAAGACC...AGATTTGGTGACACAATTTGACATTTTCCAAGGGAAGAAGACTCCTGCAGGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp GACAGCACACCTGAAAGCTCTAGAACAAAAAGAATCAAATACTCCCAAGAGGAGCCTCATGAAATTTTGTaGAAGAGATGGAGGAAGGAC +
Preference number: 2 (lower is better)
Translates to: DSTPESSRTKRIKYSQEEPHEIL*KRWRKD
Trigger: GTCCTTCCTCCATCTCTTCCACAAAATTTCATGAGG...CTCCTCTTGGGAGTATTTGATTCTTTTTGTTCTAGAGCTTTCAGGTGTGCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GACAGCACACCTGAAAGCTCTAGAACAAAAAGAATCAAATACTCCCAAGAGGAGTTAAAGAAGAGAAAGTaGGGAAGAGCCTCGAACACA +
Preference number: 2 (lower is better)
Translates to: DSTPESSRTKRIKYSQEELKKRK*GRASNT
Trigger: TGTGTTCGAGGCTCTTCCCCACTTTCTCTTCTTTAA...CTCCTCTTGGGAGTATTTGATTCTTTTTGTTCTAGAGCTTTCAGGTGTGCTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CAACCAAAAGTTATCAAAAAGGATAAGGAAGGACACTTCAGACGGGTCAAAGGAGAAGATCTCAGAAGATaGAAAGATCCCCCATGCTCA +
Preference number: 2 (lower is better)
Translates to: QPKVIKKDKEGHFRRVKGEDLRR*KDPPCS
Trigger: TGAGCATGGGGGATCTTTCCATCTTCTGAGATCTTC...TCCTTTGACCCGTCTGAAGTGTCCTTCCTTATCCTTTTTGATAACTTTTGGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp ATAAAGTTCTTGCTAACCGAATCCAAGAACACATCAAAACAATCATCCATCCTGATCGCCATTATAAGATaGCGCTGGCTTCCACTGCAC +
Preference number: 2 (lower is better)
Translates to: IKFLLTESKNTSKQSSILIAIIR*RWLPLH
Trigger: GTGCAGTGGAAGCCAGCGCCATCTTATAATGGCGAT...CAGGATGGATGATTGTTTTGATGTGTTCTTGGATTCGGTTAGCAAGAACTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAGACTCTGGAGAGTTTTaGCATAACCAGGAACACAGG +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRDSGEF*HNQEHR
Trigger: CCTGTGTTCCTGGTTATGCCAAAACTCTCCAGAGTC...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAATAGCCAGAGCAATATaGGACCATCACAGCTCAGCT +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRIARAI*DHHSSA
Trigger: AGCTGAGCTGTGATGGTCCCATATTGCTCTGGCTAT...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp AAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGTGCTGGCACAACTaGTTGTTATCATGTAGAAGA +
Preference number: 2 (lower is better)
Translates to: KGAKTIQWKKDSIFNKWCWCWHN*LLSCRR
Trigger: TCTTCTACATGATAACAACCAGTTGTGCCAGCACCA...GCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACACCAGGGATGCAGGGATaGTTCAATATATGGAAATCC +
Preference number: 2 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTPGMQG*FNIWKS
Trigger: GGATTTCCATATATTGAACCATCCCTGCATCCCTGG...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTGGGAAATCAACCAAGTaGAAACAAGAAGAACTATTC +
Preference number: 2 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICGKSTK*KQEELF
Trigger: GAATAGTTCTTCTTGTTTCCACTTGGTTGATTTCCC...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTAATACACTAACAAACTaGCTACACAAACAAGACCCA +
Preference number: 2 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICNTLTN*LHKQDP
Trigger: TGGGTCTTGTTTGTGTAGCCAGTTTGTTAGTGTATT...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACTATTTAGAGAACTCACTTaGAGATCCTGCTTCAACTGG +
Preference number: 2 (lower is better)
Translates to: PDAPQQRNGYRKCGTFTLFRELT*RSCFNW
Trigger: CCAGTTGAAGCAGGATCTCCAAGTGAGTTCTCTAAA...TAGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGTACCTGGCTGAACCCTaGAAGGCAGCTTTCACTGCA +
Preference number: 2 (lower is better)
Translates to: VTFRIASSITLSLRIKAKYLAEP*KAAFTA
Trigger: TGCAGTGAAAGCTGCCTTCCAGGGTTCAGCCAGGTA...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp CAAGCTGTACCACAGAGCAATACTGATAAAACAAACAAACAAACAAAAACTGCAAGAAGATCTCTGTCCTaGGCAGGCAATGGTCTCTGG +
Preference number: 2 (lower is better)
Translates to: QAVPQSNTDKTNKQTKTARRSLS*AGNGLW
Trigger: CCAGAGACCATTGCCTGCCCAGGACAGAGATCTTCT...TGCAGTTTTTGTTTGTTTGTTTGTTTTATCAGTATTGCTCTGTGGTACAGCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAATCCCTGTCTGGGAATaGTGGAGAGGTAATCAACCA +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRIPVWE*WRGNQP
Trigger: TGGTTGATTACCTCTCCACCATTCCCAGACAGGGAT...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp ATAAAGTTCTTGCTAACCGAATCCAAGAACACATCAAAACAATCATCCATCCTGCAGTGGAGGCCAGGATaGAAAAGATCTCTACAGCCA +
Preference number: 2 (lower is better)
Translates to: IKFLLTESKNTSKQSSILQWRPG*KRSLQP
Trigger: TGGCTGTAGAGATCTTTTCCATCCTGGCCTCCACTG...CAGGATGGATGATTGTTTTGATGTGTTCTTGGATTCGGTTAGCAAGAACTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CAA 90 bp CAAACCTTGACAACATCATCATCATCATCATCACCTCATGATACTTaGCGCACTTTGGCATTGATATTTTATGGGTATGCATGTGAGGGG +
Preference number: 2 (lower is better)
Translates to: QTLTTSSSSSSPHDT*RTLALIFYGYACEG
Trigger: CCCCTCACATGCATACCCATAAAATATCAATGCCAAAGTGCGCAAAGTATCATGAGGTGATGATGATGATGATGATGTTGTCAAGGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CCTCATGATACTTTGCGCACTTTGGCATTGATATTTTATGGGTATGCATGTGAGAGGATAGGGATTCCATaGCAACCAAAAGAGTCGATT +
Preference number: 2 (lower is better)
Translates to: PHDTLRTLALIFYGYACERIGIP*QPKESI
Trigger: AATCGACTCTTTTGGTTGTCATGGAATCCCTATCCT...CTCACATGCATACCCATAAAATATCAATGCCAAAGTGCGCAAAGTATCATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp AAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTCAATGGAAAAGAAATaGAGACCCAGAAATGAACCC +
Preference number: 2 (lower is better)
Translates to: KGAKTIQWKKDSIFNKWCSMEKK*RPRNEP
Trigger: GGGTTCATTTCTGGGTCTTCATTTCTTTTCCATTGA...GCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACTAACTCATTCTCAGAAATaGGCAGATCATGGAAACAGA +
Preference number: 2 (lower is better)
Translates to: PDAPQQRNGYRKCGTFTLTHSQK*ADHGNR
Trigger: TCTGTTTCCATGATCTGCTCATTTCTGAGAATGAGT...TAGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp ATAAAGTTCTTGCTAACCGAATCCAAGAACACATCAAAACAATCATCCATCCTGCTGTCATTCATTAGCTaGCTCCTTGCCCATCTGCAA +
Preference number: 2 (lower is better)
Translates to: IKFLLTESKNTSKQSSILLSFIS*LLAHLQ
Trigger: TTGCAGATGGGCAAGGAGTCAGCTAATGAATGACAG...CAGGATGGATGATTGTTTTGATGTGTTCTTGGATTCGGTTAGCAAGAACTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTGCTCTACACAAAGGACAAAACCAAAACAACCCTaGGATTCCACCTCACACCAG +
Preference number: 2 (lower is better)
Translates to: LDIKLTQTSQWPCSTQRTKPKQP*DSTSHQ
Trigger: CTGGTGTGAGGTGGAATCTCAGGGTTGTTTTGGTTT...TGTCCTTTGTGTAGAGCAAGGCCATTGACTTGTTTGAGTTAATTTTATATCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GGTGTGTCACCTAACTTCCCTATTTTCTTCTGTATAAAAACTTTGATGCTGAGTACACCTATGGTCACTTaGTCTTCGACAAGGGAGCTA +
Preference number: 2 (lower is better)
Translates to: GVSPNFPIFFCIKTLMLSTPMVT*SSTREL
Trigger: TAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGT...ACTCAGCATCAAAGTTTTTATACAGAAGAAAATAGGGAAGTTAGGTGACACACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTGCTCTACACAAAGGACAGTGAAGATGAGTAACTaGCCTGTCAAGGAAGAGCCA +
Preference number: 2 (lower is better)
Translates to: LDIKLTQTSQWPCSTQRTVKMSN*PVKEEP
Trigger: TGGCTCTTCCTTGACAGGTCAGTTACTCATCTTCAC...TGTCCTTTGTGTAGAGCAAGGCCATTGACTTGTTTGAGTTAATTTTATATCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp CAACCAAAAGTTATCAAAAAGGATAAGGAAGGACACTTCAGACGGGTCAAAGGATGTAATAAGGACACATaGTCCACTATGTCCACAGCA +
Preference number: 2 (lower is better)
Translates to: QPKVIKKDKEGHFRRVKGCNKDT*STMSTA
Trigger: TGCTGTGGACATAGTGGAGCATGTGTCCTTATTACA...TCCTTTGACCCGTCTGAAGTGTCCTTCCTTATCCTTTTTGATAACTTTTGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTCAAACAAACAAAAACTaGATGGTATTGGTACAGAGA +
Preference number: 2 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICQTNKN*MVLVQR
Trigger: TCTCTGTACCAATACCATGCAGTTTTTGTTTGTTTG...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp CAACCAAAAGTTATCAAAAAGGATAAGGAAGGACACTTCAGACGGGTCAAAGGAACTCATAGCTCTAAGTaGCTCCAAGAAGAAAGCAGA +
Preference number: 2 (lower is better)
Translates to: QPKVIKKDKEGHFRRVKGTHSSK*LQEESR
Trigger: TCTGCTTTCTTCTTGGAGGCACTTAGAGCTATGAGT...TCCTTTGACCCGTCTGAAGTGTCCTTCCTTATCCTTTTTGATAACTTTTGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp CCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACTAGCTCTTGTCTCTAGCTaGATATGTATCAAAAGATGG +
Preference number: 2 (lower is better)
Translates to: PDAPQQRNGYRKCGTFTLALVSS*ICIKRW
Trigger: CCATCTTTTGATACATATGCAGCTAGAGACAAGAGC...TAGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp CAAGCTGTACCACAGAGCAATACTGATAAAACAAACAAACAAACAAAAACTGCAGACTCTCATTTCCTGTaGAGAACTGGACACCCTCTG +
Preference number: 2 (lower is better)
Translates to: QAVPQSNTDKTNKQTKTADSHFL*RTGHPL
Trigger: CAGAGGGTGTCCAGTTCTGCACAGGAAATGAGAGTC...TGCAGTTTTTGTTTGTTTGTTTGTTTTATCAGTATTGCTCTGTGGTACAGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp CAAGCTGTACCACAGAGCAATACTGATAAAACAAACAAACAAACAAAAACTGCAGAAAGGAGCCTGGTATaGTTGTCTCTTGAGATGCCC +
Preference number: 2 (lower is better)
Translates to: QAVPQSNTDKTNKQTKTAERSLV*LSLEMP
Trigger: GGGCATCTCAAGAGACAACCATACCAGGCTCCTTTC...TGCAGTTTTTGTTTGTTTGTTTGTTTTATCAGTATTGCTCTGTGGTACAGCTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GACAGCACACCTGAAAGCTCTAGAACAAAAAGAATCAAATACTCCCAAGAGGAGCAGCAACCAACAGACTaGGAAAAGATCTTTACCAAT +
Preference number: 2 (lower is better)
Translates to: DSTPESSRTKRIKYSQEEQQPTD*EKIFTN
Trigger: ATTGGTAAAGATCTTTTCCCAGTCTGTTGGTTGCTG...CTCCTCTTGGGAGTATTTGATTCTTTTTGTTCTAGAGCTTTCAGGTGTGCTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CAACCAAAAGTTATCAAAAAGGATAAGGAAGGACACTTCAGACGGGTCAAAGGATTAAAGAAGAGAAAGTaGGGAAGAGCCTCGAACACA +
Preference number: 2 (lower is better)
Translates to: QPKVIKKDKEGHFRRVKGLKKRK*GRASNT
Trigger: TGTGTTCGAGGCTCTTCCCCACTTTCTCTTCTTTAA...TCCTTTGACCCGTCTGAAGTGTCCTTCCTTATCCTTTTTGATAACTTTTGGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp AAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGTCCTGTTTCAACTaGCAGTTAGCATGTAGAAAT +
Preference number: 2 (lower is better)
Translates to: KGAKTIQWKKDSIFNKWCWSCFN*QLACRN
Trigger: ATTTCTACATGCTAACTGCCAGTTGAAACAGGACCA...GCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp AAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCAAAACTGCATGGTATTaGTACAGAGAAAGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: KGAKTIQWKKDSIFNKWCKTAWY*YRERQE
Trigger: TTCCTGCCTTTCTCTGTACCAATACCATGCAGTTTT...GCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GACAAACCCTTAGCCAGACTCACTAGAGGACACAGGGAAAGCATTCTAATTAACCAAACAAAAACTGCATaGTATTGGTACAGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: DKPLARLTRGHRESILINQTKTA*YWYRER
Trigger: CCTTTCTCTGTACCAATACCATGCAGTTTTTGTTTG...GTTAATTAGAATGCTTTCCCTGTGTCCTCTAGTGAGTCTGGCTAAGGGTTTGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CCTGCATACACATGGAAGATGATCAATGCCCTGCTCAATGATAACTTGGTCAAAGAAACGAAGCTTACTTaGCATCATCAGAACCCAATT +
Preference number: 2 (lower is better)
Translates to: PAYTWKMINALLNDNLVKETKLT*HHQNPI
Trigger: AATTGGGTTCTGATGATGCCAAGTAAGCTTCGTTTC...TTTGACCAAGTTATCATTGAGCAGGGCATTGATCATCTTCCATGTGTATGCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAACAACAGGTAGTAACTaGGACAAAAGGGATCCAGAG +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRTTGSN*DKRDPE
Trigger: CTCTGGATCCCTTTTGTCCCAGTTACTACCTGTTGT...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CCTCATGATACTTTGCGCACTTTGGCATTGATATTTTATGGGTATGCATGTGAGATGAAGGATGGAAACTaGATCTTGTCACTCAGACTG +
Preference number: 2 (lower is better)
Translates to: PHDTLRTLALIFYGYACEMKDGN*ILSLRL
Trigger: CAGTCTGAGTGACAAGATCCAGTTTCCATCCTTCAT...CTCACATGCATACCCATAAAATATCAATGCCAAAGTGCGCAAAGTATCATGAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp ACACCTGCAGGAGTCTTCTTCCCTTGGAAAATGTCAAATTGTGTCACCAAATCTCATTTCTGCATCTTCTaGACAGTCTCTTCAATCTTC +
Preference number: 2 (lower is better)
Translates to: TPAGVFFPWKMSNCVTKSHFCIF*TVSSIF
Trigger: GAAGATTGAAGAGACTGTCCAGAAGATGCAGAAATG...AGATTTGGTGACACAATTTGACATTTTCCAAGGGAAGAAGACTCCTGCAGGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CCA 90 bp ATGAAAGTGGTTCTAAAAGGCAGATTCATAGATAGGACTGAGTGCCTACCCTTACTCTTCATGTCTCTTTaGTCTGTAAACTGTCCCTCA +
Preference number: 2 (lower is better)
Translates to: MKVVLKGRFIDRTECLPLLFMSL*SVNCPS
Trigger: TGAGGGACAGTTTACAGACCAAAGAGACATGAAGAG...TAAGGGTAGGCACTCAGTCCTATCTATGAATCTGCCTTTTAGAACCACTTTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CAA 90 bp CTGGATGAAATGGAGAAGTTTCTAGACAGATACCAGATACCAAAGTaGAATCAAGATCAGGTTAATGATCTAAACAGCCTGATATCCCCC +
Preference number: 2 (lower is better)
Translates to: LDEMEKFLDRYQIPK*NQDQVNDLNSLISP
Trigger: GGGGGATATCAGGCTGTTTAGATCATTAACCTGATCTTGATTCAACTTTGGTATCTGGTATCTGTCTAGAAACTTCTCCATTTCATCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACAATGCTCAGCAAACCTTaGCAACATCATCATCATCAT +
Preference number: 2 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTMLSKP*QHHHHH
Trigger: ATGATGATGATGATGTTGTCAAGGTTTGCTGAGCAT...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GACAGCACACCTGAAAGCTCTAGAACAAAAAGAATCAAATACTCCCAAGAGGAGAAGCCACAATTACTTTaGTACCTAAACCACACAAAG +
Preference number: 2 (lower is better)
Translates to: DSTPESSRTKRIKYSQEEKPQLL*YLNHTK
Trigger: CTTTGTGTGGTTTAGGTATCAAAGTAATTGTGGCTT...CTCCTCTTGGGAGTATTTGATTCTTTTTGTTCTAGAGCTTTCAGGTGTGCTGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CAACCAAAAGTTATCAAAAAGGATAAGGAAGGACACTTCAGACGGGTCAAAGGAACTCATTCTCAGAAATaGGCAGATCATGGAAACAGA +
Preference number: 2 (lower is better)
Translates to: QPKVIKKDKEGHFRRVKGTHSQK*ADHGNR
Trigger: TCTGTTTCCATGATCTGCTCATTTCTGAGAATGAGT...TCCTTTGACCCGTCTGAAGTGTCCTTCCTTATCCTTTTTGATAACTTTTGGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CCTGCATACACATGGAAGATGATCAATGCCCTGCTCAATGATAACTTGGTCAAATCTCACAAAAGACTATaGAAGCTAGAAGATTTTGGG +
Preference number: 2 (lower is better)
Translates to: PAYTWKMINALLNDNLVKSHKRL*KLEDFG
Trigger: CCCAAAATCTTCTAGCTTTCATAGTCTTTTGTGAGA...TTTGACCAAGTTATCATTGAGCAGGGCATTGATCATCTTCCATGTGTATGCAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp ATGAAAGTGGTTCTAAAAGGCAGATTCATAGATAGGACTGAGTGCCTACCCTTAAATCCCAAATCCACATaGCTAGAGGCCAAAATAAGA +
Preference number: 2 (lower is better)
Translates to: MKVVLKGRFIDRTECLPLNPKST*LEAKIR
Trigger: TCTTATTTTGGCCTCTAGTCATGTGGATTTGGGATT...TAAGGGTAGGCACTCAGTCCTATCTATGAATCTGCCTTTTAGAACCACTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGATGGCAGAGAAGCACCTaGAAAAATGTTCAACATCCT +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRWQRST*KNVQHP
Trigger: AGGATGTTGAACATTTTTTCAGGTGCTTCTCTGCCA...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTGCTCTACACAAAGGACAAACAATCATCCATCCTaGCCAAGTAGGTTTCATCCC +
Preference number: 2 (lower is better)
Translates to: LDIKLTQTSQWPCSTQRTNNHPS*PSRFHP
Trigger: GGGATGAAACCTACTTGGTCAGGATGGATGATTGTT...TGTCCTTTGTGTAGAGCAAGGCCATTGACTTGTTTGAGTTAATTTTATATCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACAATGTTGCCTATTCAGTaGCATTCAGAATTGCCTCTA +
Preference number: 2 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTMLPIQ*HSELPL
Trigger: TAGAGGCAATTCTGAATGTCACTGAATAGGCAACAT...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp GGTGTGTCACCTAACTTCCCTATTTTCTTCTGTATAAAAACTTTGATGCTGAGTTCAGGTGACAGCAGATaGTGCCAAGAATGTGAAGAA +
Preference number: 2 (lower is better)
Translates to: GVSPNFPIFFCIKTLMLSSGDSR*CQECEE
Trigger: TTCTTCACATTCTTGGCAGCATCTGCTGTCACCTGA...ACTCAGCATCAAAGTTTTTATACAGAAGAAAATAGGGAAGTTAGGTGACACACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACAACTCATAGCTCTGAGTaGCTCCAAAAAGAAACTAGA +
Preference number: 2 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTTHSSE*LQKETR
Trigger: TCTAGTTTCTTTTTGGAGGCACTCAGAGCTATGAGT...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp ATGAAAGTGGTTCTAAAAGGCAGATTCATAGATAGGACTGAGTGCCTACCCTTAAGCTTAATCTTCACGTaGGTCACTCAACAAATGAAG +
Preference number: 2 (lower is better)
Translates to: MKVVLKGRFIDRTECLPLSLIFT*VTQQMK
Trigger: CTTCATTTGTTGAGTGACCCACGTGAAGATTAAGCT...TAAGGGTAGGCACTCAGTCCTATCTATGAATCTGCCTTTTAGAACCACTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACACAGCAACCAACAGACTaGGAAAAGATCTTTACCAAT +
Preference number: 2 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTQQPTD*EKIFTN
Trigger: ATTGGTAAAGATCTTTTCCCAGTCTGTTGGTTGCTG...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAAGACCACCAACAGATTaGGAAAGGATCCTTACCTAT +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRRPPTD*ERILTY
Trigger: ATAGGTAAGGATCCTTTCCCAATCTGTTGGTGGTCT...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACAGCTAAAACCATCCAGTaGAAGAAAGACAGCATTTTC +
Preference number: 2 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTAKTIQ*KKDSIF
Trigger: GAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGC...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp ATGAAAGTGGTTCTAAAAGGCAGATTCATAGATAGGACTGAGTGCCTACCCTTAGCTAAAACCATCCAGTaGAAGAAAGACAGCATTTTC +
Preference number: 2 (lower is better)
Translates to: MKVVLKGRFIDRTECLPLAKTIQ*KKDSIF
Trigger: GAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGC...TAAGGGTAGGCACTCAGTCCTATCTATGAATCTGCCTTTTAGAACCACTTTCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp AAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTATACTCAACAAAACTaGAGAACCTGGATGAAATGG +
Preference number: 2 (lower is better)
Translates to: KGAKTIQWKKDSIFNKWCYTQQN*RTWMKW
Trigger: CCATTTCATCCAGGTTCTCCAGTTTTGTTGAGTATA...GCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGAGAAAGGTCCTGTTTTaGGCCTTCTTCTTCAGCCAG +
Preference number: 2 (lower is better)
Translates to: VTFRIASSITLSLRIKAKRKVLF*AFFFSQ
Trigger: CTGGCTGAAGAAGAAGGCCCAAAACAGGACCTTTCT...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGATTCTGGAAAGGGATGTaGCTTGTTTTTCAGACTCTC +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRFWKGM*LVFQTL
Trigger: GAGAGTCTGAAAAACAAGCCACATCCCTTTCCAGAA...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CAA 90 bp TCATCATCATCATCATCACCTCATGATACTTTGCGCACTTTGGCATaGATATTTTATGGGTATGCATGTGAGGGGTATTCTTTGATTACC +
Preference number: 2 (lower is better)
Translates to: SSSSSSPHDTLRTLA*IFYGYACEGYSLIT
Trigger: GGTAATCAAAGAATACCCCTCACATGCATACCCATAAAATATCAATGCCAAAGTGCGCAAAGTATCATGAGGTGATGATGATGATGATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GGTGTGTCACCTAACTTCCCTATTTTCTTCTGTATAAAAACTTTGATGCTGAGTTCATTAAAGAGGAAATaGGTGTGCAAACTCCACAGC +
Preference number: 2 (lower is better)
Translates to: GVSPNFPIFFCIKTLMLSSLKRK*VCKLHS
Trigger: GCTGTGGAGTTTGCACACTCATTTCCTCTTTAATGA...ACTCAGCATCAAAGTTTTTATACAGAAGAAAATAGGGAAGTTAGGTGACACACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp ATAAAGTTCTTGCTAACCGAATCCAAGAACACATCAAAACAATCATCCATCCTGCATTCACGTGGAAACTaGACAACACTCTTCTCAATG +
Preference number: 2 (lower is better)
Translates to: IKFLLTESKNTSKQSSILHSRGN*TTLFSM
Trigger: CATTGAGAAGAGTGTTGTTCAGTTTCCACGTGAATG...CAGGATGGATGATTGTTTTGATGTGTTCTTGGATTCGGTTAGCAAGAACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp GGTGTGTCACCTAACTTCCCTATTTTCTTCTGTATAAAAACTTTGATGCTGAGTGGTGACAGCAGATGCTaGCAAGAATGTGAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: GVSPNFPIFFCIKTLMLSGDSRC*QECEEK
Trigger: TTTTTCTTCACATTCTTGGCAGCATCTGCTGTCACC...ACTCAGCATCAAAGTTTTTATACAGAAGAAAATAGGGAAGTTAGGTGACACACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAATCAAAATAATCCCATaGACCCTATCACCTTGTGGA +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRIKIIP*TLSPCG
Trigger: TCCACAAGGTGATAGGGTGCATGGGATTATTTTGAT...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGACATCTATGCTCCAAATaGAAGTGTACCCACATTCAT +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRHLCSK*KCTHIH
Trigger: ATGAATGTGGGTACACTTGCATTTGGAGCATAGATG...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp CTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTGCTCTACACAAAGGACAAAACTCCAAAGTTTCTaGAAGGCAAAAGACACCGTC +
Preference number: 2 (lower is better)
Translates to: LDIKLTQTSQWPCSTQRTKLQSF*KAKDTV
Trigger: GACGGTGTCTTTTGCCTTGCAGAAACTTTGGAGTTT...TGTCCTTTGTGTAGAGCAAGGCCATTGACTTGTTTGAGTTAATTTTATATCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp ATAAAGTTCTTGCTAACCGAATCCAAGAACACATCAAAACAATCATCCATCCTGACAAGTCAATGGCCTTaGTCTACACAAAGGACAAAC +
Preference number: 2 (lower is better)
Translates to: IKFLLTESKNTSKQSSILTSQWP*STQRTN
Trigger: GTTTGTCCTTTGTGTAGAGCAAGGCCATTGACTTGT...CAGGATGGATGATTGTTTTGATGTGTTCTTGGATTCGGTTAGCAAGAACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAGATGCATCCTTCTGGTaGAAGAAATATACCTTAGCA +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRDASFW*KKYTLA
Trigger: TGCTAAGGTATATTTCTTGCACCAGAAGGATGCATC...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GGTGTGTCACCTAACTTCCCTATTTTCTTCTGTATAAAAACTTTGATGCTGAGTCTTGTTTGGACTTGGTaGGAGAGGATATATCTAGTC +
Preference number: 2 (lower is better)
Translates to: GVSPNFPIFFCIKTLMLSLVWTW*ERIYLV
Trigger: GACTAGATATATCCTCTCCCACCAAGTCCAAACAAG...ACTCAGCATCAAAGTTTTTATACAGAAGAAAATAGGGAAGTTAGGTGACACACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp ATAAAGTTCTTGCTAACCGAATCCAAGAACACATCAAAACAATCATCCATCCTGATAATAGCCAGAAGCTaGAAAGAACCCAGATGTCTC +
Preference number: 2 (lower is better)
Translates to: IKFLLTESKNTSKQSSILIIARS*KEPRCL
Trigger: GAGACATCTGGGTTCTTTCCAGCTTCTGGCTATTAT...CAGGATGGATGATTGTTTTGATGTGTTCTTGGATTCGGTTAGCAAGAACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CAACCAAAAGTTATCAAAAAGGATAAGGAAGGACACTTCAGACGGGTCAAAGGACAAACAAAAACTGCATaGTATTGGTACAGAGAAAGG +
Preference number: 2 (lower is better)
Translates to: QPKVIKKDKEGHFRRVKGQTKTA*YWYRER
Trigger: CCTTTCTCTGTACCAATACCATGCAGTTTTTGTTTG...TCCTTTGACCCGTCTGAAGTGTCCTTCCTTATCCTTTTTGATAACTTTTGGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CAAGCTGTACCACAGAGCAATACTGATAAAACAAACAAACAAACAAAAACTGCAGAAGATCTCAGAAGATaGAAAGATCCCCCATGCTCA +
Preference number: 2 (lower is better)
Translates to: QAVPQSNTDKTNKQTKTAEDLRR*KDPPCS
Trigger: TGAGCATGGGGGATCTTTCCATCTTCTGAGATCTTC...TGCAGTTTTTGTTTGTTTGTTTGTTTTATCAGTATTGCTCTGTGGTACAGCTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAGAAACGAAGCTTACTTaGCATCATCAGAACCCAATT +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRETKLT*HHQNPI
Trigger: AATTGGGTTCTGATGATGCCAAGTAAGCTTCGTTTC...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp ATAAAGTTCTTGCTAACCGAATCCAAGAACACATCAAAACAATCATCCATCCTGGAAGATCTCAGAAGATaGAAAGATCTCCCATGCTCA +
Preference number: 2 (lower is better)
Translates to: IKFLLTESKNTSKQSSILEDLRR*KDLPCS
Trigger: TGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTC...CAGGATGGATGATTGTTTTGATGTGTTCTTGGATTCGGTTAGCAAGAACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAAATTCTACTCACTTCTaGAAAGGGATGTGGCTTGTT +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRNSTHF*KGMWLV
Trigger: AACAAGCCACATCCCTTTCCAGAAGTGAGTAGAATT...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CAA 90 bp TGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGCACAACTGGTaGTTATCATGTAGAAGATTTCGAATTGATCCATACCTATTTCCT +
Preference number: 2 (lower is better)
Translates to: WKKDSIFNKWCWHNW*LSCRRFRIDPYLFP
Trigger: AGGAAATAGGTATGGATCAATTCGAAATCTTCTACATGATAACAACCAGTTGTGCCAGCACCATTTGTTGAAAATGCTGTCTTTCTTCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 90 bp CCAACATTCACGTGGAAACTGAACAACACTCTTCTCAATGATACCTaGGTCAAGGAAGGAATAAAGAAAGAAATTAAGGACTTCTTAGAG +
Preference number: 2 (lower is better)
Translates to: PTFTWKLNNTLLNDT*VKEGIKKEIKDFLE
Trigger: CTCTAAGAAGTCCTTAATTTCTTTCTTTATTCCTTCCTTGACCAAGGTATCATTGAGAAGAGTGTTGTTCAGTTTCCACGTGAATGTTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTGCTCTACACAAAGGACAATGCTCAGCAAACCTTaGCAACATCATCATCATCAT +
Preference number: 2 (lower is better)
Translates to: LDIKLTQTSQWPCSTQRTMLSKP*QHHHHH
Trigger: ATGATGATGATGATGTTGTCAAGGTTTGCTGAGCAT...TGTCCTTTGTGTAGAGCAAGGCCATTGACTTGTTTGAGTTAATTTTATATCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGAGGATAGGGATTCCATaGCAACCAAAAGAGTCGATT +
Preference number: 2 (lower is better)
Translates to: VTFRIASSITLSLRIKAKRIGIP*QPKESI
Trigger: AATCGACTCTTTTGGTTGTCATGGAATCCCTATCCT...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAAAACTGGTGAAAGAATaGAATAAACCACTCAGTACC +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRKLVKE*NKPLST
Trigger: GGTACTGAGTGGTTTATTTCATTCTTTCACCAGTTT...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp ATAAAGTTCTTGCTAACCGAATCCAAGAACACATCAAAACAATCATCCATCCTGGGTTCCTCAGAAAATTaGCATAGTACTACCAGAAGA +
Preference number: 2 (lower is better)
Translates to: IKFLLTESKNTSKQSSILGSSEN*HSTTRR
Trigger: TCTTCTGGTAGTACTATGTCAATTTTCTGAGGAACC...CAGGATGGATGATTGTTTTGATGTGTTCTTGGATTCGGTTAGCAAGAACTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAAAGCCACAATTACTTTaGTACCTAAACCACACAAAG +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRKPQLL*YLNHTK
Trigger: CTTTGTGTGGTTTAGGTATCAAAGTAATTGTGGCTT...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGACTGGAGAACCTGGATaGAATGGAGAAGTTTCTAGA +
Preference number: 2 (lower is better)
Translates to: VTFRIASSITLSLRIKAKTGEPG*NGEVSR
Trigger: TCTAGAAACTTCTCCATTTCATCCAGGTTCTCCAGT...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR TCA 90 bp CTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTGCTCTACACAAAGGACAACCACAAAGAAACTGTaGGCCACAATCATAAACTTG +
Preference number: 2 (lower is better)
Translates to: LDIKLTQTSQWPCSTQRTTTKKL*ATIINL
Trigger: CAAGTTTATGATTGTGGCTCACAGTTTCTTTGTGGT...TGTCCTTTGTGTAGAGCAAGGCCATTGACTTGTTTGAGTTAATTTTATATCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGACTCATAGCTCTAAGTaGCTCCAAGAAGAAAGCAGA +
Preference number: 2 (lower is better)
Translates to: VTFRIASSITLSLRIKAKTHSSK*LQEESR
Trigger: TCTGCTTTCTTCTTGGAGGCACTTAGAGCTATGAGT...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp ATAAAGTTCTTGCTAACCGAATCCAAGAACACATCAAAACAATCATCCATCCTGATCAAAATAATCCCATaGACCCTATCACCTTGTGGA +
Preference number: 2 (lower is better)
Translates to: IKFLLTESKNTSKQSSILIKIIP*TLSPCG
Trigger: TCCACAAGGTGATAGGGTGCATGGGATTATTTTGAT...CAGGATGGATGATTGTTTTGATGTGTTCTTGGATTCGGTTAGCAAGAACTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp ATGAAAGTGGTTCTAAAAGGCAGATTCATAGATAGGACTGAGTGCCTACCCTTAAATCTACAGATTCAATaGAATCCCCATCAAAATTCC +
Preference number: 2 (lower is better)
Translates to: MKVVLKGRFIDRTECLPLNLQIQ*NPHQNS
Trigger: GGAATTTTGATGGGGATTGCATTGAATCTGTAGATT...TAAGGGTAGGCACTCAGTCCTATCTATGAATCTGCCTTTTAGAACCACTTTCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGCCTCATGAAATTTTGTaGAAGAGATGGAGGAAGGAC +
Preference number: 2 (lower is better)
Translates to: VTFRIASSITLSLRIKAKPHEIL*KRWRKD
Trigger: GTCCTTCCTCCATCTCTTCCACAAAATTTCATGAGG...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CAACCAAAAGTTATCAAAAAGGATAAGGAAGGACACTTCAGACGGGTCAAAGGATGTGTTCAAAAACAATaGAAAACCTGCATACACATG +
Preference number: 2 (lower is better)
Translates to: QPKVIKKDKEGHFRRVKGCVQKQ*KTCIHM
Trigger: CATGTGTATGCAGGTTTTCCATTGTTTTTGAACACA...TCCTTTGACCCGTCTGAAGTGTCCTTCCTTATCCTTTTTGATAACTTTTGGTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACATGTGTTCAAAAACAATaGAAAACCTGCATACACATG +
Preference number: 2 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTCVQKQ*KTCIHM
Trigger: CATGTGTATGCAGGTTTTCCATTGTTTTTGAACACA...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGTGGTGCTGGCACAACTaGTTGTTATCATGTAGAAGA +
Preference number: 2 (lower is better)
Translates to: VTFRIASSITLSLRIKAKWCWHN*LLSCRR
Trigger: TCTTCTACATGATAACAACCAGTTGTGCCAGCACCA...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GGTGTGTCACCTAACTTCCCTATTTTCTTCTGTATAAAAACTTTGATGCTGAGTTTCAACAAATGGTGCTaGCACAACTGGTTGTTATCA +
Preference number: 2 (lower is better)
Translates to: GVSPNFPIFFCIKTLMLSFNKWC*HNWLLS
Trigger: TGATAACAACCAGTTGTGCCAGCACCATTTGTTGAA...ACTCAGCATCAAAGTTTTTATACAGAAGAAAATAGGGAAGTTAGGTGACACACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAGGGAAATCAACCAAGTaGAAACAAGAAGAACTATTC +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRGKSTK*KQEELF
Trigger: GAATAGTTCTTCTTGTTTCCACTTGGTTGATTTCCC...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTGCTCTACACAAAGGACAAAGCCAACATTCACGTaGAAACTGAACAACACTCTT +
Preference number: 2 (lower is better)
Translates to: LDIKLTQTSQWPCSTQRTKPTFT*KLNNTL
Trigger: AAGAGTGTTGTTCAGTTTCCACGTGAATGTTGGCTT...TGTCCTTTGTGTAGAGCAAGGCCATTGACTTGTTTGAGTTAATTTTATATCCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GGTGTGTCACCTAACTTCCCTATTTTCTTCTGTATAAAAACTTTGATGCTGAGTCCAATGGACAGATCATaGAAACAGAAACTAAACAGG +
Preference number: 2 (lower is better)
Translates to: GVSPNFPIFFCIKTLMLSPMDRS*KQKLNR
Trigger: CCTGTTTAGTTTCTGTTTCCATGATCTGTCCATTGG...ACTCAGCATCAAAGTTTTTATACAGAAGAAAATAGGGAAGTTAGGTGACACACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp ATAAAGTTCTTGCTAACCGAATCCAAGAACACATCAAAACAATCATCCATCCTGGGAGTCTTCTTCCCTTaGAAAATGTCAAATTGTGTC +
Preference number: 2 (lower is better)
Translates to: IKFLLTESKNTSKQSSILGVFFP*KMSNCV
Trigger: GACACAATTTGACATTTTCCAAGGGAAGAAGACTCC...CAGGATGGATGATTGTTTTGATGTGTTCTTGGATTCGGTTAGCAAGAACTTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CAA 90 bp GTCTTCTTCCCTTGGAAAATGTCAAATTGTGTCACCAAATCTCCATaGGCATCAAACATAATCTTATTTCCATCAGAAGTCTTGAAGTAC +
Preference number: 2 (lower is better)
Translates to: VFFPWKMSNCVTKSP*ASNIILFPSEVLKY
Trigger: GTACTTCAAGACTTCTGATGGAAATAAGATTATGTTTGATGCCAATGGAGATTTGGTGACACAATTTGACATTTTCCAAGGGAAGAAGAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR TCA 90 bp ATAAAGTTCTTGCTAACCGAATCCAAGAACACATCAAAACAATCATCCATCCTGCTCAATTACCATACATaGAGAAACCAAGATAGTCCA +
Preference number: 2 (lower is better)
Translates to: IKFLLTESKNTSKQSSILLNYHT*RNQDSP
Trigger: TGGACTATCTTGGTTTCTTCATGTATGGTAATTGAG...CAGGATGGATGATTGTTTTGATGTGTTCTTGGATTCGGTTAGCAAGAACTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp AGTAAGCCATGTAGGATGAGCTGGAAATTTGAATTGCTTAAGAAAACCAAAACAAATTCCACAACCCTGTaGATATATGAAGCAGATGTG +
Preference number: 2 (lower is better)
Translates to: SKPCRMSWKFELLKKTKTNSTTL*IYEADV
Trigger: CACATCTGCTTCATATATGCACAGGGTTGTGGAATT...TGTTTTGGTTTTCTTAAGCAATTCAAATTTCCAGCTCATCCTACATGGCTTACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR GCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGACAAACAAACAAAAACTaGATGGTATTGGTACAGAGA +
Preference number: 2 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRQTNKN*MVLVQR
Trigger: TCTCTGTACCAATACCATGCAGTTTTTGTTTGTTTG...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGCATCTATGCTCCAAATaGAAGTGTACCCACATTCAT +
Preference number: 2 (lower is better)
Translates to: VTFRIASSITLSLRIKAKHLCSK*KCTHIH
Trigger: ATGAATGTGGGTACACTTGCATTTGGAGCATAGATG...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp ATAAAGTTCTTGCTAACCGAATCCAAGAACACATCAAAACAATCATCCATCCTGATTTTCAACAAATGGTaGTGGCACAACTGGTTGTTA +
Preference number: 2 (lower is better)
Translates to: IKFLLTESKNTSKQSSILIFNKW*WHNWLL
Trigger: TAACAACCAGTTGTGCCAGCACCATTTGTTGAAAAT...CAGGATGGATGATTGTTTTGATGTGTTCTTGGATTCGGTTAGCAAGAACTTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGTTCAACAAATGGTGCTaGCACAACTGGTTGTTATCA +
Preference number: 2 (lower is better)
Translates to: VTFRIASSITLSLRIKAKFNKWC*HNWLLS
Trigger: TGATAACAACCAGTTGTGCCAGCACCATTTGTTGAA...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 90 bp ATAAACACACTAGAGCTTAAATTACATATTGACCCTCGTACGATATaGAGAGACTTCAGTAAATCTATATGTACCAACAAACAGGCCATC +
Preference number: 2 (lower is better)
Translates to: INTLELKLHIDPRTI*RDFSKSICTNKQAI
Trigger: GATGGCCTGTTTGTTGGTACATATAGATTTACTGAAGTCTCTCAATATCGTACGAGGGTCAATATGTAATTTAAGCTCTAGTGTGTTTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGACTGTATACAGGAAATaGACCTCAATGAAAACGACA +
Preference number: 2 (lower is better)
Translates to: VTFRIASSITLSLRIKAKTVYRK*TSMKTT
Trigger: TGTCGTTTTCATTGAGGTGCATTTCCTGTATACAGT...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp CTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTGCTCTACACAAAGGACAATTGAAATTGTTCCATaGATCCTATCAGATCACCAT +
Preference number: 2 (lower is better)
Translates to: LDIKLTQTSQWPCSTQRTIEIVP*ILSDHH
Trigger: ATGGTGATCTGATAGGATGCATGGAACAATTTCAAT...TGTCCTTTGTGTAGAGCAAGGCCATTGACTTGTTTGAGTTAATTTTATATCCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR GCA 90 bp GGTGTGTCACCTAACTTCCCTATTTTCTTCTGTATAAAAACTTTGATGCTGAGTTTTCAACAGCTTTATTaGAGAAATGCCTTGATGCTA +
Preference number: 2 (lower is better)
Translates to: GVSPNFPIFFCIKTLMLSFQQLY*RNALML
Trigger: TAGCATCAAGGCATTTCTGCAATAAAGCTGTTGAAA...ACTCAGCATCAAAGTTTTTATACAGAAGAAAATAGGGAAGTTAGGTGACACACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp CTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTGCTCTACACAAAGGACAGAAATGAGCAGATCATaGAAACAGAAACTAAACAGA +
Preference number: 2 (lower is better)
Translates to: LDIKLTQTSQWPCSTQRTEMSRS*KQKLNR
Trigger: TCTGTTTAGTTTCTGTTTCCATGATCTGCTCATTTC...TGTCCTTTGTGTAGAGCAAGGCCATTGACTTGTTTGAGTTAATTTTATATCCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CCA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGTATACTCAACAAAACTaGAGAACCTGGATGAAATGG +
Preference number: 2 (lower is better)
Translates to: VTFRIASSITLSLRIKAKYTQQN*RTWMKW
Trigger: CCATTTCATCCAGGTTCTCCAGTTTTGTTGAGTATA...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp CAGGCAGAGGCACAGAGCCGCAGAGGCAGCACCCTTTaGGGGCCGCAGACAGACAGCCACCGTCCGGACCAG +
Preference number: 3 (lower is better)
Translates to: QAEAQSRRGSTL*GPQTDSHRPDQ
Trigger: CTGGTCCGGACGGTGGCTGTCTGTCTGCGGCCCGCAAAGGGTGCTGCCTCTGCGGCTCTGTGCCTCTGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp CAGGTGAGAGGGTGTGCCACAGAACCGGACAGCTTCTaGGACAGGCAGAGGCACAGAGCCGCAGAGGCAGCA +
Preference number: 3 (lower is better)
Translates to: QVRGCATEPDSF*DRQRHRAAEAA
Trigger: TGCTGCCTCTGCGGCTCTGTGCCTCTGCCTGTCCCAGAAGCTGTCCGGTTCTGTGGCACACCCTCTCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp CCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTaGTCAGTCTACCGGCACCTTACTTTGCATGCACCC +
Preference number: 3 (lower is better)
Translates to: PSTGEGYVSSWD*SVYRHLTLHAP
Trigger: GGGTGCATGCAAAGTAAGGTGCCGGTAGACTGACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp GGGATCCAGAGATGCAGGAACCCCTGCTCGACCCAGTaGCTAGGATGTCTGAACTGGTGCCCTAAGCAGACA +
Preference number: 3 (lower is better)
Translates to: GIQRCRNPCSTQ*LGCLNWCPKQT
Trigger: TGTCTGCTTAGGGCACCAGTTCAGACATCCTAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp ACTGGGACAAAAGGGATCCAGAGATGCAGGAACCCCTaGTCGACCCAGTGGCTAGGATGTCTGAACTGGTGC +
Preference number: 3 (lower is better)
Translates to: TGTKGIQRCRNP*STQWLGCLNWC
Trigger: GCACCAGTTCAGACATCCTAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp TGGAGAGCCATGCCTCGAGCAATCGCATGCGTGCCATaGGCAATCGCCATTATAAGATGGCGCTGGCTTCCA +
Preference number: 3 (lower is better)
Translates to: WRAMPRAIACVP*AIAIIRWRWLP
Trigger: TGGAAGCCAGCGCCATCTTATAATGGCGATTGCCCATGGCACGCATGCGATTGCTCGAGGCATGGCTCTCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp GTAGAGGACCCAAGTCCTATTCCAGGCTCCCACATCTaGTGGCTCACAACTACCTGTAACTCCAGCCCCAGG +
Preference number: 3 (lower is better)
Translates to: VEDPSPIPGSHI*WLTTTCNSSPR
Trigger: CCTGGGGCTGGAGTTACAGGTAGTTGTGAGCCACCAGATGTGGGAGCCTGGAATAGGACTTGGGTCCTCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 72 bp CACCAGCTGGGGTCAACATCTGTGTGGCCAGAGAGCTaGCCTGCTGCCCAAAGTCATCATCATGGGCAAGAA +
Preference number: 3 (lower is better)
Translates to: HQLGSTSVWPES*PAAQSHHHGQE
Trigger: TTCTTGCCCATGATGATGACTTTGGGCAGCAGGCCAGCTCTCTGGCCACACAGATGTTGACCCCAGCTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 72 bp AGGGACGTGAAGGTGATACTCAATGCACACACCAGCTaGGGTCAACATCTGTGTGGCCAGAGAGCTGGCCTG +
Preference number: 3 (lower is better)
Translates to: RDVKVILNAHTS*GQHLCGQRAGL
Trigger: CAGGCCAGCTCTCTGGCCACACAGATGTTGACCCCAGCTGGTGTGTGCATTGAGTATCACCTTCACGTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 72 bp TCAAAGGCCAAGAAGATCTCTGTCCTGGGCAGGCAATaGTCTCTGGTGTGGCTCGAGTACTGCTCCTTGGGG +
Preference number: 3 (lower is better)
Translates to: SKAKKISVLGRQ*SLVWLEYCSLG
Trigger: CCCCAAGGAGCAGTACTCGAGCCACACCAGAGACCATTGCCTGCCCAGGACAGAGATCTTCTTGGCCTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 72 bp CCCAGCACACAGAAGAAGTTGGCTCCAGAACCCTCATaGCATTGGATGACAGTGTGCCGGGGCTCTGAGATC +
Preference number: 3 (lower is better)
Translates to: PSTQKKLAPEPS*HWMTVCRGSEI
Trigger: GATCTCAGAGCCCCGGCACACTGTCATCCAATGCCATGAGGGTTCTGGAGCCAACTTCTTCTGTGTGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR TCA 72 bp ACCCTCATGGCATTGGATGACAGTGTGCCGGGGCTCTaGGATCATATCCCTGTCTGGGAATGGTGGAGAGGT +
Preference number: 3 (lower is better)
Translates to: TLMALDDSVPGL*DHIPVWEWWRG
Trigger: ACCTCTCCACCATTCCCAGACAGGGATATGATCTCAGAGCCCCGGCACACTGTCATCCAATGCCATGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 72 bp GGGGTCAACATCTGTGTGGCCAGAGAGCTGGCCTGCTaGCCAAAGTCATCATCATGGGCAAGAATGATCACC +
Preference number: 3 (lower is better)
Translates to: GVNICVARELAC*PKSSSWARMIT
Trigger: GGTGATCATTCTTGCCCATGATGATGACTTTGGGCAGCAGGCCAGCTCTCTGGCCACACAGATGTTGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 72 bp GCTGGGGTCAACATCTGTGTGGCCAGAGAGCTGGCCTaGTGCCCAAAGTCATCATCATGGGCAAGAATGATC +
Preference number: 3 (lower is better)
Translates to: AGVNICVARELA*CPKSSSWARMI
Trigger: GATCATTCTTGCCCATGATGATGACTTTGGGCAGCAGGCCAGCTCTCTGGCCACACAGATGTTGACCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 72 bp GTTCTGTTGTTGGCCCTGACCACAGGTGTATCCCGGTaGTTCAGGAACACTCCAAGAACCAGGACAGCCAGA +
Preference number: 3 (lower is better)
Translates to: VLLLALTTGVSR*FRNTPRTRTAR
Trigger: TCTGGCTGTCCTGGTTCTTGGAGTGTTCCTGAAGCACCGGGATACACCTGTGGTCAGGGCCAACAACAGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 72 bp ACACACCTTCTCTGGAGCATCTCACACTGCCTATTGTaGTGTACCTGGTGGCCTTGCCTTAACCAGGCAGGG +
Preference number: 3 (lower is better)
Translates to: THLLWSISHCLL*CTWWPCLNQAG
Trigger: CCCTGCCTGGTTAAGGCAAGGCCACCAGGTACAGCACAATAGGCAGTGTGAGATGCTCCAGAGAAGGTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 72 bp ATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTaGGATTGGTCAGTCTACCGGCACCTTACTTTGCAT +
Preference number: 3 (lower is better)
Translates to: IHPSTGEGYVSS*DWSVYRHLTLH
Trigger: ATGCAAAGTAAGGTGCCGGTAGACTGACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp GAGGACCCAAGTCCTATTCCAGGCTCCCACATCTGGTaGCTCACAACTACCTGTAACTCCAGCCCCAGGAAA +
Preference number: 3 (lower is better)
Translates to: EDPSPIPGSHIW*LTTTCNSSPRK
Trigger: TTTCCTGGGGCTGGAGTTACAGGTAGTTGTGAGCCACCAGATGTGGGAGCCTGGAATAGGACTTGGGTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 72 bp CTCTGGAGCATCTCACACTGCCTATTGTGCTGTACCTaGTGGCCTTGCCTTAACCAGGCAGGGGTGTTCTTC +
Preference number: 3 (lower is better)
Translates to: LWSISHCLLCCT*WPCLNQAGVFF
Trigger: GAAGAACACCCCTGCCTGGTTAAGGCAAGGCCACCAGGTACAGCACAATAGGCAGTGTGAGATGCTCCAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CAA 90 bp AGCTGGACTCTGGAGAGTTTTGGCATAACCAGGAACACAGGAAGGACAGGCTACAGGTACCAGGGTAGGTaGGTTCCCCAGAAGGACCTC +
Preference number: 3 (lower is better)
Translates to: SWTLESFGITRNTGRTGYRYQGR*VPQKDL
Trigger: GAGGTCCTTCTGGGGAACCAACCTACCCTGGTACCT...GTAGCCTGTCCTTCCTGTGTTCCTGGTTATGCCAAAACTCTCCAGAGTCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp AGGACTGATGGGAAGGGACGTGAAGGTGATACTCAATaGACACACCAGCTGGGGTCAACATCTGTGTGGCCA +
Preference number: 3 (lower is better)
Translates to: RTDGKGREGDTQ*THQLGSTSVWP
Trigger: TGGCCACACAGATGTTGACCCCAGCTGGTGTGTGCATTGAGTATCACCTTCACGTCCCTTCCCATCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 72 bp ACAGAAGGCCAAATGTGCCTTGCAACACCTGGGAAATaGCTGGTATGGTCAGGGCAAGTGCCATGTGCAGAG +
Preference number: 3 (lower is better)
Translates to: TEGQMCLATPGK*LVWSGQVPCAE
Trigger: CTCTGCACATGGCACTTGCCCTGACCATACCAGGCATTTCCCAGGTGTTGCAAGGCACATTTGGCCTTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 72 bp CCTGAGGACACACACCTTCTCTGGAGCATCTCACACTaGCTATTGTGCTGTACCTGGTGGCCTTGCCTTAAC +
Preference number: 3 (lower is better)
Translates to: PEDTHLLWSISH*LLCCTWWPCLN
Trigger: GTTAAGGCAAGGCCACCAGGTACAGCACAATAGGCAGTGTGAGATGCTCCAGAGAAGGTGTGTGTCCTCAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 72 bp AAGGCCAAATGTGCCTTGCAACACCTGGGAAATGCCTaGTATGGTCAGGGCAAGTGCCATGTGCAGAGTGTC +
Preference number: 3 (lower is better)
Translates to: KAKCALQHLGNA*YGQGKCHVQSV
Trigger: GACACTCTGCACATGGCACTTGCCCTGACCATACCAGGCATTTCCCAGGTGTTGCAAGGCACATTTGGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 72 bp TGGAGCATCTCACACTGCCTATTGTGCTGTACCTGGTaGCCTTGCCTTAACCAGGCAGGGGTGTTCTTCTCA +
Preference number: 3 (lower is better)
Translates to: WSISHCLLCCTW*PCLNQAGVFFS
Trigger: TGAGAAGAACACCCCTGCCTGGTTAAGGCAAGGCCACCAGGTACAGCACAATAGGCAGTGTGAGATGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CAA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTATAGGGTGGTCTTGTTaGGACTTGGTGGGAGAGGAT +
Preference number: 3 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGIGWSC*DLVGED
Trigger: ATCCTCTCCCACCAAGTCCAAACAAGACCACCCTAT...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp ACTGGGACAAAAGGGATCCAGAGATGCAGGAACCCCTGCTCGACCCAGTGGCTAAGGTCAGAAGACAAATaGTGGGGGCTGGTTTTCTTC +
Preference number: 3 (lower is better)
Translates to: TGTKGIQRCRNPCSTQWLRSEDK*WGLVFF
Trigger: GAAGAAAACCAGCCCCCACAATTTGTCTTCTGACCT...TAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR TCA 72 bp TGGTCAAACCAGGATCTCAGGGTCCAAGAGGCAGCTTaGCTCCCAGGAACTCTGAAACACTCAGGATCTCAG +
Preference number: 3 (lower is better)
Translates to: WSNQDLRVQEAA*LPGTLKHSGSQ
Trigger: CTGAGATCCTGAGTGTTTCAGAGTTCCTGGGAGTCAAGCTGCCTCTTGGACCCTGAGATCCTGGTTTGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp GTAAGAGAGCTTGCCAGCAGAGAGTGCTCTGAGCACTaGAACTCAGAGGAGAGAATCTGTCTCCCAGGTCTG +
Preference number: 3 (lower is better)
Translates to: VRELASRECSEH*NSEERICLPGL
Trigger: CAGACCTGGGAGACAGATTCTCTCCTCTGAGTTTCAGTGCTCAGAGCACTCTCTGCTGGCAAGCTCTCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp GACAGCTTCTGGGACCTGCCAAAGCAACACAGCTTCTaGGAAAGGTCCTGTTTTGGGCCTTCTTCTTCAGCC +
Preference number: 3 (lower is better)
Translates to: DSFWDLPKQHSF*ERSCFGPSSSA
Trigger: GGCTGAAGAAGAAGGCCCAAAACAGGACCTTTCTCAGAAGCTGTGTTGCTTTGGCAGGTCCCAGAAGCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp AGAAGAAGTTGGCTCCAGAACCCTCATGGCATTGGATaGCAGTGTGCCGGGGCTCTGAGATCATATCCCTGT +
Preference number: 3 (lower is better)
Translates to: RRSWLQNPHGIG*QCAGALRSYPC
Trigger: ACAGGGATATGATCTCAGAGCCCCGGCACACTGTCATCCAATGCCATGAGGGTTCTGGAGCCAACTTCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 72 bp TCTGTCTGTCATTCATTAGCTGACTCCTTGCCCATCTaGAACTCGAGACCCGTTCCACGCAGACAAAGGGAC +
Preference number: 3 (lower is better)
Translates to: SVCHSLADSLPI*NSRPVPRRQRD
Trigger: GTCCCTTTGTCTGCGTGGAACGGGTCTCGAGTTGCAGATGGGCAAGGAGTCAGCTAATGAATGACAGACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp CTGGAGGCCCTCCAGCACAAGGAACACCAGGTAAGTTaGTACACACACTCCAGTGAAGTTTGCTTGGCTAAG +
Preference number: 3 (lower is better)
Translates to: LEALQHKEHQVS*YTHSSEVCLAK
Trigger: CTTAGCCAAGCAAACTTCACTGGAGTGTGTGTAGCAACTTACCTGGTGTTCCTTGTGCTGGAGGGCCTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp ATCTCACACTGCCTATTGTGCTGTACCTGGTGGCCTTaGCTTAACCAGGCAGGGGTGTTCTTCTCAGGTTTC +
Preference number: 3 (lower is better)
Translates to: ISHCLLCCTWWP*LNQAGVFFSGF
Trigger: GAAACCTGAGAAGAACACCCCTGCCTGGTTAAGGCAAGGCCACCAGGTACAGCACAATAGGCAGTGTGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 72 bp GGATGCCAAGAAGTGCATGCTGAAAGGAGCCTGGTATaGTTGTCTCTTGAGATGCCCTGCCAGAGCCTTACA +
Preference number: 3 (lower is better)
Translates to: GCQEVHAERSLV*LSLEMPCQSLT
Trigger: TGTAAGGCTCTGGCAGGGCATCTCAAGAGACAACCATACCAGGCTCCTTTCAGCATGCACTTCTTGGCATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp CCCTTCACAGCTTCCCAATCACTGCAGACAGCTCTGTaGCCTCTGGAAGGAAACCCACAACCATGTCTTAAC +
Preference number: 3 (lower is better)
Translates to: PFTASQSLQTAL*PLEGNPQPCLN
Trigger: GTTAAGACATGGTTGTGGGTTTCCTTCCAGAGGCCACAGAGCTGTCTGCAGTGATTGGGAAGCTGTGAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CAA 90 bp GTGGCAGTAAGTCCACACCACAAGCCCTACACCTGCCAATTTCTCTTAAAGCACAAGTGGGGGAAAGCCTaGAAGATATGGGCACAGGGG +
Preference number: 3 (lower is better)
Translates to: VAVSPHHKPYTCQFLLKHKWGKA*KIWAQG
Trigger: CCCCTGTGCCCATATCTTCAAGGCTTTCCCCCACTT...GTGCTTTAAGAGAAATTGGCAGGTGTAGGGCTTGTGGTGTGGACTTACTGCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTGATGGAAACTGGATCTaGTCACTCAGACTGGGTAGT +
Preference number: 3 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGDGNWI*SLRLGS
Trigger: ACTACCCAGTCTGAGTGACAAGATCCAGTTTCCATC...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CAA 90 bp ACTGGGACAAAAGGGATCCAGAGATGCAGGAACCCCTGCTCGACCCAGTGGCTAGAACCTCATGAAATTTaGTGGAAGAGATGGAGGAAG +
Preference number: 3 (lower is better)
Translates to: TGTKGIQRCRNPCSTQWLEPHEI*WKRWRK
Trigger: CTTCCTCCATCTCTTCCACAAAATTTCATGAGGTTC...TAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GCCAGAAGCTGGAAAGAACCCAGATGTCTCTCAACAGAGGAATGGATACAGAAAAGAACCCTCATGGCATaGGATGACAGTGTGCCGGGG +
Preference number: 3 (lower is better)
Translates to: ARSWKEPRCLSTEEWIQKRTLMA*DDSVPG
Trigger: CCCCGGCACACTGTCATCCAATGCCATGAGGGTTCT...TTTCTGTATCCATTCCTCTGTTGAGAGACATCTGGGTTCTTTCCAGCTTCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 72 bp AGTCCCACAAAATCCAGAGGAAGCTCCACTCCCAGGTaGTCTAAAATGCCCAGGATCAGAGGATCACAGGAT +
Preference number: 3 (lower is better)
Translates to: SPTKSRGSSTPR*SKMPRIRGSQD
Trigger: ATCCTGTGATCCTCTGATCCTGGGCATTTTAGAGCACCTGGGAGTGGAGCTTCCTCTGGATTTTGTGGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp TGCATGTGTAGAGGTCAGAAGACAAATTGTGGGGGCTaGTTTTCTTCTTCCTCCTGGTGCGTTCCAGAGGCT +
Preference number: 3 (lower is better)
Translates to: CMCRGQKTNCGG*FSSSSWCVPEA
Trigger: AGCCTCTGGAACGCACCAGGAGGAAGAAGAAAACCAGCCCCCACAATTTGTCTTCTGACCTCTACACATGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 72 bp TCCTTGGGGCACAGAAGGCATCTCTTCATGTCTCTTTaGTCTGTAAACTGTCCCTCAGGGCATGGACTGCAA +
Preference number: 3 (lower is better)
Translates to: SLGHRRHLFMSL*SVNCPSGHGLQ
Trigger: TTGCAGTCCATGCCCTGAGGGACAGTTTACAGACCAAAGAGACATGAAGAGATGCCTTCTGTGCCCCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CAA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTAGGAGCCTGGTATGGTaGTCTCTTGAGATGCCCTGC +
Preference number: 3 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICRSLVW*SLEMPC
Trigger: GCAGGGCATCTCAAGAGACAACCATACCAGGCTCCT...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp AGGAGTACACATGGCTCCAGTTGCATATGTAGCAGATaGTGGCCTTGTCAGGCATCAACAGGAGGAGAAGTC +
Preference number: 3 (lower is better)
Translates to: RSTHGSSCICSR*WPCQASTGGEV
Trigger: GACTTCTCCTCCTGTTGATGCCTGACAAGGCCATCATCTGCTACATATGCAACTGGAGCCATGTGTACTCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp TTAGTCTGCACAGGTGAAAGTATGCACCACAGAAGCTaGCAGCTTCTGGGACCTGCCAAAGCAACACAGCTT +
Preference number: 3 (lower is better)
Translates to: LVCTGESMHHRS*QLLGPAKATQL
Trigger: AAGCTGTGTTGCTTTGGCAGGTCCCAGAAGCTGTCAGCTTCTGTGGTGCATACTTTCACCTGTGCAGACTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp GAAAGGAGCCTGGTATGGTTGTCTCTTGAGATGCCCTaGCAGAGCCTTACAAATACAGAGGCAGATGCTCAT +
Preference number: 3 (lower is better)
Translates to: ERSLVWLSLEMP*QSLTNTEADAH
Trigger: ATGAGCATCTGCCTCTGTATTTGTAAGGCTCTGGCAGGGCATCTCAAGAGACAACCATACCAGGCTCCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp AAGTATGCACCACAGAAGCTGACAGCTTCTGGGACCTaGCAAAGCAACACAGCTTCTGAGAAAGGTCCTGTT +
Preference number: 3 (lower is better)
Translates to: KYAPQKLTASGT*QSNTASEKGPV
Trigger: AACAGGACCTTTCTCAGAAGCTGTGTTGCTTTGGCAGGTCCCAGAAGCTGTCAGCTTCTGTGGTGCATACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp ACAAATTGTGGGGGCTGGTTTTCTTCTTCCTCCTGGTaGGTTCCAGAGGCTCAAACTCAGATCATCAGGCTT +
Preference number: 3 (lower is better)
Translates to: TNCGGWFSSSSW*VPEAQTQIIRL
Trigger: AAGCCTGATGATCTGAGTTTGAGCCTCTGGAACGCACCAGGAGGAAGAAGAAAACCAGCCCCCACAATTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 72 bp GGAGCTCTTGTCTCTAGCTGCATATGTATCAAAAGATaGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCAT +
Preference number: 3 (lower is better)
Translates to: GALVSSCICIKR*PSRPSLQREAH
Trigger: ATGGGCCTCTCTTTGCAGTGATGGCCGACTAGGCCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp GCCAAAGCAACACAGCTTCTGAGAAAGGTCCTGTTTTaGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACA +
Preference number: 3 (lower is better)
Translates to: AKATQLLRKVLF*AFFFSQEDVQT
Trigger: TGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAGGACCTTTCTCAGAAGCTGTGTTGCTTTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp AAGACAAATTGTGGGGGCTGGTTTTCTTCTTCCTCCTaGTGCGTTCCAGAGGCTCAAACTCAGATCATCAGG +
Preference number: 3 (lower is better)
Translates to: KTNCGGWFSSSS*CVPEAQTQIIR
Trigger: CCTGATGATCTGAGTTTGAGCCTCTGGAACGCACCAGGAGGAAGAAGAAAACCAGCCCCCACAATTTGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 72 bp CAGCTTCCCAATCACTGCAGACAGCTCTGTGGCCTCTaGAAGGAAACCCACAACCATGTCTTAACTGGTTTA +
Preference number: 3 (lower is better)
Translates to: QLPNHCRQLCGL*KETHNHVLTGL
Trigger: TAAACCAGTTAAGACATGGTTGTGGGTTTCCTTCCAGAGGCCACAGAGCTGTCTGCAGTGATTGGGAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 72 bp CAGCAAGAGTGCTACCAAAGCCAATATGAATCCCAGTaGTTCCTCAAAGGCCAAGAAGATCTCTGTCCTGGG +
Preference number: 3 (lower is better)
Translates to: QQECYQSQYESQ*FLKGQEDLCPG
Trigger: CCCAGGACAGAGATCTTCTTGGCCTTTGAGGAACCACTGGGATTCATATTGGCTTTGGTAGCACTCTTGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CAA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTGATACTTTGCGCACTTaGGCATTGATATTTTATGGG +
Preference number: 3 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGDTLRT*ALIFYG
Trigger: CCCATAAAATATCAATGCCAAAGTGCGCAAAGTATC...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp AGCTGGACTCTGGAGAGTTTTGGCATAACCAGGAACACAGGAAGGACAGGCTACTGGTCTTGTTTGGACTaGGTGGGAGAGGATATATCT +
Preference number: 3 (lower is better)
Translates to: SWTLESFGITRNTGRTGYWSCLD*VGEDIS
Trigger: AGATATATCCTCTCCCACCAAGTCCAAACAAGACCA...GTAGCCTGTCCTTCCTGTGTTCCTGGTTATGCCAAAACTCTCCAGAGTCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTACAAATCAGTGGCCTTaGTCTACTCAAAGGATAAAC +
Preference number: 3 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGTNQWP*STQRIN
Trigger: GTTTATCCTTTGAGTAGACAAAGGCCACTGATTTGT...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTAAGGCCAAATGTGCCTaGCAACACCTGGGAAATGCC +
Preference number: 3 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICKAKCA*QHLGNA
Trigger: GGCATTTCCCAGGTGTTGCAAGGCACATTTGGCCTT...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR TCA 72 bp TTCTGTATAAAAACTTTGATGCTGAGTCTGAACAGGTaGGAGGGTGTGCCACAGAACCGGACAGCTTCTGGG +
Preference number: 3 (lower is better)
Translates to: FCIKTLMLSLNR*EGVPQNRTASG
Trigger: CCCAGAAGCTGTCCGGTTCTGTGGCACACCCTCTCACCTGTTCAGACTCAGCATCAAAGTTTTTATACAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp ATTATAGCAGACTTCTCAATGGAGACTCTAAAACCCTaGAGTGTCCCGCCCACCTCGTCCAGCAAGGAAAAC +
Preference number: 3 (lower is better)
Translates to: IIADFSMETLKP*SVPPTSSSKEN
Trigger: GTTTTCCTTGCTGGACGAGGTGGGCGGGACACTTCAGGGTTTTAGAGTCTCCATTGAGAAGTCTGCTATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp AGATCCAGGACTCAGGAGCAAGCTAAAGGTCTGATTTaGATGTCAGAAGGATGGGGCTGGGAGAGATATCTC +
Preference number: 3 (lower is better)
Translates to: RSRTQEQAKGLI*MSEGWGWERYL
Trigger: GAGATATCTCTCCCAGCCCCATCCTTCTGACATTCAAATCAGACCTTTAGCTTGCTCCTGAGTCCTGGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 72 bp CTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGTaGAAAAACTCAGGTGACAGCAGATGCTGCCAAGAA +
Preference number: 3 (lower is better)
Translates to: LRFHLTPVRMAK*KNSGDSRCCQE
Trigger: TTCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCACTTAGCCATTCTGACTGGTGTGAGGTGGAATCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp AATCCAGAGGAAGCTCCACTCCCAGGTGCTCTAAAATaGCCAGGATCAGAGGATCACAGGATTACAGAATCT +
Preference number: 3 (lower is better)
Translates to: NPEEAPLPGALK*PGSEDHRITES
Trigger: AGATTCTGTAATCCTGTGATCCTCTGATCCTGGGCATTTTAGAGCACCTGGGAGTGGAGCTTCCTCTGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp GGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTaGAGGCTTGTACAACCACTATGGAAATCAGTCTGG +
Preference number: 3 (lower is better)
Translates to: GERGTLLHCWWD*RLVQPLWKSVW
Trigger: CCAGACTGATTTCCATAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp AGGCAGATGCTCATAGCCAACCATTGGACTGAGCACTaGGTCCCCAATAGAGGAATTAGAGAAAGGACTGAA +
Preference number: 3 (lower is better)
Translates to: RQMLIANHWTEH*VPNRGIRERTE
Trigger: TTCAGTCCTTTCTCTAATTCCTCTATTGGGGACCCAGTGCTCAGTCCAATGGTTGGCTATGAGCATCTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp GGACTCAACATCTGTTCTAACACAACAGGTAGTAACTaGGACAAAAGGGATCCAGAGATGCAGGAACCCCTG +
Preference number: 3 (lower is better)
Translates to: GLNICSNTTGSN*DKRDPEMQEPL
Trigger: CAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGTTACTACCTGTTGTGTTAGAACAGATGTTGAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp CGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTaGTGGGATTGCAGGCTTGTACAACCACTATGGAAA +
Preference number: 3 (lower is better)
Translates to: RGCGERGTLLHC*WDCRLVQPLWK
Trigger: TTTCCATAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp TCAGAATGGCTAAGTGCAAAAACTCAGGTGACAGCAGATGCTGCCAAGAATGTGCCTAATAGGGTGGTCTaGTTTGGACTTGGTGGGAGA +
Preference number: 3 (lower is better)
Translates to: SEWLSAKTQVTADAAKNVPNRVV*FGLGGR
Trigger: TCTCCCACCAAGTCCAAACAAGACCACCCTATTAGG...CACATTCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCACTTAGCCATTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GTGGCAGTAAGTCCACACCACAAGCCCTACACCTGCCAATTTCTCTTAAAGCACAAAGGACTGAAAGAGTaGAAGGGGTTTGCAACCCAT +
Preference number: 3 (lower is better)
Translates to: VAVSPHHKPYTCQFLLKHKGLKE*KGFATH
Trigger: ATGGGTTGCAAACCCCTTCAACTCTTTCAGTCCTTT...GTGCTTTAAGAGAAATTGGCAGGTGTAGGGCTTGTGGTGTGGACTTACTGCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GTGGCAGTAAGTCCACACCACAAGCCCTACACCTGCCAATTTCTCTTAAAGCACAAAAACTGCATGGTATaGGTACAGAGAAAGGCAGGA +
Preference number: 3 (lower is better)
Translates to: VAVSPHHKPYTCQFLLKHKNCMV*VQRKAG
Trigger: TCCTGCCTTTCTCTGTACCAATACCATGCAGTTTTT...GTGCTTTAAGAGAAATTGGCAGGTGTAGGGCTTGTGGTGTGGACTTACTGCCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp AAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCATCTCACACTGCCTATaGTGCTGTACCTGGTGGCCT +
Preference number: 3 (lower is better)
Translates to: KGAKTIQWKKDSIFNKWCISHCL*CCTWWP
Trigger: AGGCCACCAGGTACAGCACAATAGGCAGTGTGAGAT...GCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR TCA 72 bp AGGCAAATGGATGGACCTGGAGGGCATCATCCTGAGTaGGGTAACCCAATCACAAAGGAACTCTCACAATAT +
Preference number: 3 (lower is better)
Translates to: RQMDGPGGHHPE*GNPITKELSQY
Trigger: ATATTGTGAGAGTTCCTTTGTGATTGGGTTACCTCACTCAGGATGATGCCCTCCAGGTCCATCCATTTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp CCGAATCCAAGAACACATCAAAACAATCATCCATCCTaGCCAAGTAGGTTTCATCCCAGGGATGCAGGGATG +
Preference number: 3 (lower is better)
Translates to: PNPRTHQNNHPS*PSRFHPRDAGM
Trigger: CATCCCTGCATCCCTGGGATGAAACCTACTTGGTCAGGATGGATGATTGTTTTGATGTGTTCTTGGATTCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp AGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATaGTGGCGTGGATGTGGAGAAAGAGGAACACTCCTC +
Preference number: 3 (lower is better)
Translates to: RMAKIKNSGDSR*WRGCGERGTLL
Trigger: GAGGAGTGTTCCTCTTTCTCCACATCCACGCCAGCATCTGCTGTCACCTGAATTTTTGATCTTAGCCATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp CACTATGTCCACAGCAGCCTTATAATAGCCAGAAGCTaGAAAGAACCCAGATGTCTCTCAACAGAGGAATGG +
Preference number: 3 (lower is better)
Translates to: HYVHSSLIIARS*KEPRCLSTEEW
Trigger: CCATTCCTCTGTTGAGAGACATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAGGCTGCTGTGGACATAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp TGCCAAGAATGTGAAGAAAAAGGAACACTCCACCATTaGTGGCAGGACTGCAAACTGGTAGAACTACTCTGG +
Preference number: 3 (lower is better)
Translates to: CQECEEKGTLHH*WQDCKLVELLW
Trigger: CCAGAGTAGTTCTACCAGTTTGCAGTCCTGCCACCAATGGTGGAGTGTTCCTTTTTCTTCACATTCTTGGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp AAACACAGAAGTGGATGTTCACAGTCAGCTATTGAATaGACCACAGGGCCCCCAATGGAGGAACTAGAGAAA +
Preference number: 3 (lower is better)
Translates to: KHRSGCSQSAIE*TTGPPMEELEK
Trigger: TTTCTCTAGTTCCTCCATTGGGGGCCCTGTGGTCCATTCAATAGCTGACTGTGAACATCCACTTCTGTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp GTCCCGCCCACCTCGTCCAGCAAGGAAAACGCAACATaGTCGAATTCTTTTCAACAGCTTTATTGCAGAAAT +
Preference number: 3 (lower is better)
Translates to: VPPTSSSKENAT*SNSFQQLYCRN
Trigger: ATTTCTGCAATAAAGCTGTTGAAAAGAATTCGACCATGTTGCGTTTTCCTTGCTGGACGAGGTGGGCGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GTGGCAGTAAGTCCACACCACAAGCCCTACACCTGCCAATTTCTCTTAAAGCACACCATTCTTACATCCTaGTACAAAGTTCAAGTCCGA +
Preference number: 3 (lower is better)
Translates to: VAVSPHHKPYTCQFLLKHTILTS*YKVQVR
Trigger: TCGGACTTGAACTTTGTACAAGGATGTAAGAATGGT...GTGCTTTAAGAGAAATTGGCAGGTGTAGGGCTTGTGGTGTGGACTTACTGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GTGGCAGTAAGTCCACACCACAAGCCCTACACCTGCCAATTTCTCTTAAAGCACATTTTACACAACCTCTaGTGTTGCATCTGTCTGTCA +
Preference number: 3 (lower is better)
Translates to: VAVSPHHKPYTCQFLLKHILHNL*CCICLS
Trigger: TGACAGACAGATGCAACACAAGAGGTTGTGTAAAAT...GTGCTTTAAGAGAAATTGGCAGGTGTAGGGCTTGTGGTGTGGACTTACTGCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GGTGTGTCACCTAACTTCCCTATTTTCTTCTGTATAAAAACTTTGATGCTGAGTTGTGGGGGAGTGGGTTaGGGGAGGTGTGTATCCATC +
Preference number: 3 (lower is better)
Translates to: GVSPNFPIFFCIKTLMLSCGGVG*GRCVSI
Trigger: GATGGATACACACCTCCCCAAACCCACTCCCCCACA...ACTCAGCATCAAAGTTTTTATACAGAAGAAAATAGGGAAGTTAGGTGACACACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR TCA 72 bp AGGCACCCTAACATACCCAGTATCATAGGATCTAGGTaGGGAGGACTCAACATCTGTTCTAACACAACAGGT +
Preference number: 3 (lower is better)
Translates to: RHPNIPSIIGSR*GGLNICSNTTG
Trigger: ACCTGTTGTGTTAGAACAGATGTTGAGTCCTCCTCACCTAGATCCTATGATACTGGGTATGTTAGGGTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp TTGCCAGTGTTCCAACATCCTAGAAAGTCCTTGAGCTaGCCATGGGCTTGGAATTCAGTAAGAATGTTGCCT +
Preference number: 3 (lower is better)
Translates to: LPVFQHPRKSLS*PWAWNSVRMLP
Trigger: AGGCAACATTCTTACTGAATTCCAAGCCCATGGTCAGCTCAAGGACTTTCTAGGATGTTGGAACACTGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp TCTTGTCACTCAGACTGGGTAGTGAAGATGAGTAACTaGCCTGTCAAGGAAGAGCCAGGCAATATGAGAGTA +
Preference number: 3 (lower is better)
Translates to: SCHSDWVVKMSN*PVKEEPGNMRV
Trigger: TACTCTCATATTGCCTGGCTCTTCCTTGACAGGTCAGTTACTCATCTTCACTACCCAGTCTGAGTGACAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR GCA 72 bp GAAGAAAAAGGAACACTCCACCATTGGTGGCAGGACTaGAAACTGGTAGAACTACTCTGGAAATCAGTTTGG +
Preference number: 3 (lower is better)
Translates to: EEKGTLHHWWQD*KLVELLWKSVW
Trigger: CCAAACTGATTTCCAGAGTAGTTCTACCAGTTTGCAGTCCTGCCACCAATGGTGGAGTGTTCCTTTTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp TTACAAATACAGAGGCAGATGCTCATAGCCAACCATTaGACTGAGCACTGGGTCCCCAATAGAGGAATTAGA +
Preference number: 3 (lower is better)
Translates to: LQIQRQMLIANH*TEHWVPNRGIR
Trigger: TCTAATTCCTCTATTGGGGACCCAGTGCTCAGTCCAATGGTTGGCTATGAGCATCTGCCTCTGTATTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp CATTGGTGGCAGGACTGCAAACTGGTAGAACTACTCTaGAAATCAGTTTGGCGGTTCCTCAGAAAATTGACA +
Preference number: 3 (lower is better)
Translates to: HWWQDCKLVELL*KSVWRFLRKLT
Trigger: TGTCAATTTTCTGAGGAACCGCCAAACTGATTTCCAGAGTAGTTCTACCAGTTTGCAGTCCTGCCACCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp TTGGTGGCAGGACTGCAAACTGGTAGAACTACTCTGGAAATCAGTTTGGCGGTTGATACTTTGCGCACTTaGGCATTGATATTTTATGGG +
Preference number: 3 (lower is better)
Translates to: LVAGLQTGRTTLEISLAVDTLRT*ALIFYG
Trigger: CCCATAAAATATCAATGCCAAAGTGCGCAAAGTATC...AACCGCCAAACTGATTTCCAGAGTAGTTCTACCAGTTTGCAGTCCTGCCACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTCATGCTCAGCAAACCTaGACAACATCATCATCATCA +
Preference number: 3 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICHAQQT*TTSSSS
Trigger: TGATGATGATGATGTTGTCAAGGTTTGCTGAGCATG...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTGAACCTCATGAAATTTaGTGGAAGAGATGGAGGAAG +
Preference number: 3 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICEPHEI*WKRWRK
Trigger: CTTCCTCCATCTCTTCCACAAAATTTCATGAGGTTC...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GACAAACCCTTAGCCAGACTCACTAGAGGACACAGGGAAAGCATTCTAATTAACGCCACAATCATAAACTaGATCCTAGTGACTCTCCTG +
Preference number: 3 (lower is better)
Translates to: DKPLARLTRGHRESILINATIIN*ILVTLL
Trigger: CAGGAGAGTCACTAGGATCAAGTTTATGATTGTGGC...GTTAATTAGAATGCTTTCCCTGTGTCCTCTAGTGAGTCTGGCTAAGGGTTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR TCA 72 bp GGAAGGACTGAGGAACACAGAAGGATAGGGATTCCATaGCAACCAAAAGAGTCGATTAATCTAGACACTTGG +
Preference number: 3 (lower is better)
Translates to: GRTEEHRRIGIP*QPKESINLDTW
Trigger: CCAAGTGTCTAGATTAATCGACTCTTTTGGTTGTCATGGAATCCCTATCCTTCTGTGTTCCTCAGTCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp ATTTTGCTGAAAGGACCCAGATATAGCTGTCTCTTGTaGGACTATGCCAATGGCCTAGCAAACACAGAAGTG +
Preference number: 3 (lower is better)
Translates to: ILLKGPRYSCLL*DYANGLANTEV
Trigger: CACTTCTGTGTTTGCTAGGCCATTGGCATAGTCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp CCATATACAGTTACAAAACCCAGATACTATTGTGGATaGCAAGAAGTGCATGCTGAAAGGAGCCTGGTATGG +
Preference number: 3 (lower is better)
Translates to: PYTVTKPRYYCG*QEVHAERSLVW
Trigger: CCATACCAGGCTCCTTTCAGCATGCACTTCTTGGCATCCACAATAGTATCTGGGTTTTGTAACTGTATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp AGAATGGCTAAGTGCAAAAACTCAGGTGACAGCAGATaGTGCCAAGAATGTGAAGAAAAAGGAACACTCCAC +
Preference number: 3 (lower is better)
Translates to: RMAKCKNSGDSR*CQECEEKGTLH
Trigger: GTGGAGTGTTCCTTTTTCTTCACATTCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCACTTAGCCATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp TTAACTGGTTTACATCTCAGTGTCTGTCCTTCCCACTaGCCATTCCTACATTTGTTTCAACTAGGCTTGGTG +
Preference number: 3 (lower is better)
Translates to: LTGLHLSVCPSH*PFLHLFQLGLV
Trigger: CACCAAGCCTAGTTGAAACAAATGTAGGAATGGGCAGTGGGAAGGACAGACACTGAGATGTAAACCAGTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 72 bp CAAGAATGTGAAGAAAAAGGAACACTCCACCATTGGTaGCAGGACTGCAAACTGGTAGAACTACTCTGGAAA +
Preference number: 3 (lower is better)
Translates to: QECEEKGTLHHW*QDCKLVELLWK
Trigger: TTTCCAGAGTAGTTCTACCAGTTTGCAGTCCTGCCACCAATGGTGGAGTGTTCCTTTTTCTTCACATTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp ATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTaGAAAGAACCCAGATGCCCCTCAACAGAGGAATGG +
Preference number: 3 (lower is better)
Translates to: MFIAALFIIARS*KEPRCPSTEEW
Trigger: CCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATTATAAATAAGGCTGCTATGAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp CCTGACCAAGTAGGTTTCATCCCAGGGATGCAGGGATaGTTCAATATATGGAAATCCATCAACATAATCCAG +
Preference number: 3 (lower is better)
Translates to: PDQVGFIPGMQG*FNIWKSINIIQ
Trigger: CTGGATTATGTTGATGGATTTCCATATATTGAACCATCCCTGCATCCCTGGGATGAAACCTACTTGGTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp TCAGAATGGCTAAGTGCAAAAACTCAGGTGACAGCAGATGCTGCCAAGAATGTGTTGCGCACTTTGGCATaGATATTTTATGGGTATGCA +
Preference number: 3 (lower is better)
Translates to: SEWLSAKTQVTADAAKNVLRTLA*IFYGYA
Trigger: TGCATACCCATAAAATATCAATGCCAAAGTGCGCAA...CACATTCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCACTTAGCCATTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp CAAGCTGTACCACAGAGCAATACTGATAAAACAAACAAACAAACAAAAACTGCAAGGAGCCTGGTATGGTaGTCTCTTGAGATGCCCTGC +
Preference number: 3 (lower is better)
Translates to: QAVPQSNTDKTNKQTKTARSLVW*SLEMPC
Trigger: GCAGGGCATCTCAAGAGACAACCATACCAGGCTCCT...TGCAGTTTTTGTTTGTTTGTTTGTTTTATCAGTATTGCTCTGTGGTACAGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp TCAGAATGGCTAAGTGCAAAAACTCAGGTGACAGCAGATGCTGCCAAGAATGTGGTAAAAATGGCCATCTaGCCAAAAGCAATCTACAGA +
Preference number: 3 (lower is better)
Translates to: SEWLSAKTQVTADAAKNVVKMAI*PKAIYR
Trigger: TCTGTAGATTGCTTTTGGCAAGATGGCCATTTTTAC...CACATTCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCACTTAGCCATTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTACAAATCAGTGGCCTTaGTCTACTCAAAGGATAAAC +
Preference number: 3 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICTNQWP*STQRIN
Trigger: GTTTATCCTTTGAGTAGACAAAGGCCACTGATTTGT...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTCTTCTCAATGATACCTaGGTCAAGGAAGGAATAAAG +
Preference number: 3 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICLLNDT*VKEGIK
Trigger: CTTTATTCCTTCCTTGACCAAGGTATCATTGAGAAG...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp ACACCTGCAGGAGTCTTCTTCCCTTGGAAAATGTCAAATTGTGTCACCAAATCTTGCCCATTCCTACATTaGTTTCAACTAGGCTTGGTG +
Preference number: 3 (lower is better)
Translates to: TPAGVFFPWKMSNCVTKSCPFLH*FQLGLV
Trigger: CACCAAGCCTAGTTGAAACAAATGTAGGAATGGGCA...AGATTTGGTGACACAATTTGACATTTTCCAAGGGAAGAAGACTCCTGCAGGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CAA 90 bp ATGAAAGTGGTTCTAAAAGGCAGATTCATAGATAGGACTGAGTGCCTACCCTTAGATCACCCAGGACCATaGAAAGTGAATTACCAGCTG +
Preference number: 3 (lower is better)
Translates to: MKVVLKGRFIDRTECLPLDHPGP*KVNYQL
Trigger: CAGCTGGTAATTCACTTTCAATGGTCCTGGGTGATC...TAAGGGTAGGCACTCAGTCCTATCTATGAATCTGCCTTTTAGAACCACTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CAA 90 bp ATGAAAGTGGTTCTAAAAGGCAGATTCATAGATAGGACTGAGTGCCTACCCTTAGGAAGTTGTGAGAGTTaGTACCTTTCCTCTCCTGGT +
Preference number: 3 (lower is better)
Translates to: MKVVLKGRFIDRTECLPLGSCES*YLSSPG
Trigger: ACCAGGAGAGGAAAGGTACAAACTCTCACAACTTCC...TAAGGGTAGGCACTCAGTCCTATCTATGAATCTGCCTTTTAGAACCACTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CAA 90 bp GCCAGAAGCTGGAAAGAACCCAGATGTCTCTCAACAGAGGAATGGATACAGAAATTTCCATCAGAAGTCTaGAAGTACACATTTCTGAGG +
Preference number: 3 (lower is better)
Translates to: ARSWKEPRCLSTEEWIQKFPSEV*KYTFLR
Trigger: CCTCAGAAATGTGTACTTCAAGACTTCTGATGGAAA...TTTCTGTATCCATTCCTCTGTTGAGAGACATCTGGGTTCTTTCCAGCTTCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR TCA 72 bp ACGCTGACACCATTTCATACACTAGCAAGATTTTGCTaGAAGGACCCAGATATAGCTGTCTCTTGTGAGACT +
Preference number: 3 (lower is better)
Translates to: TLTPFHTLARFC*KDPDIAVSCET
Trigger: AGTCTCACAAGAGACAGCTATATCTGGGTCCTTTCAGCAAAATCTTGCTAGTGTATGAAATGGTGTCAGCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp AAAATGGGGCTCAGAACTGAACAAAGAATTCTCACCTaGGGAATACCGAATGGCAGAGAAGCACCTGAAAAA +
Preference number: 3 (lower is better)
Translates to: KMGLRTEQRILT*GIPNGREAPEK
Trigger: TTTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTCTTTGTTCAGTTCTGAGCCCCATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp ACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTaGGCTGTAAGATTGAGAATTGACAAATGGGACCTA +
Preference number: 3 (lower is better)
Translates to: TGEKFLNRTAMA*AVRLRIDKWDL
Trigger: TAGGTCCCATTTGTCAATTCTCAATCTTACAGCGCAAGCCATTGCTGTTCTGTTCAGGAATTTTTCCCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp TTTCTGAAGAAAGAAATCGAAGAAGATCTCAGAAGATaGAAAGATCCCCCATGCTCATGGATTGGCAGGACT +
Preference number: 3 (lower is better)
Translates to: FLKKEIEEDLRR*KDPPCSWIGRT
Trigger: AGTCCTGCCAATCCATGAGCATGGGGGATCTTTCCATCTTCTGAGATCTTCTTCGATTTCTTTCTTCAGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp TCTCTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATaGAAAGATCTCCCATGCTCAGGGATCGGCAGGATC +
Preference number: 3 (lower is better)
Translates to: SLKKEIKEDLRR*KDLPCSGIGRI
Trigger: GATCCTGCCGATCCCTGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAATTTCTTTCTTCAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp CACCCTGCATCCTATCTTACTACCACAGATTTCAGCTaGATGTCAACAACAGAAACAACAGAAAGCCTACAA +
Preference number: 3 (lower is better)
Translates to: HPASYLTTTDFS*MSTTETTESLQ
Trigger: TTGTAGGCTTTCTGTTGTTTCTGTTGTTGACATCCAGCTGAAATCTGTGGTAGTAAGATAGGATGCAGGGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp GACAGCTGTGTAAGCAGCATCAATTCTACTCACTTCTaGAAAGGGATGTGGCTTGTTTTTCAGACTCTCATT +
Preference number: 3 (lower is better)
Translates to: DSCVSSINSTHF*KGMWLVFQTLI
Trigger: AATGAGAGTCTGAAAAACAAGCCACATCCCTTTCCAGAAGTGAGTAGAATTGATGCTGCTTACACAGCTGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 72 bp ACCAAGTGGAATACACCTGCAGGAGTCTTCTTCCCTTaGAAAATGTCAAATTGTGTCACCAAATCTCCATTG +
Preference number: 3 (lower is better)
Translates to: TKWNTPAGVFFP*KMSNCVTKSPL
Trigger: CAATGGAGATTTGGTGACACAATTTGACATTTTCCAAGGGAAGAAGACTCCTGCAGGTGTATTCCACTTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR-3UTR CAA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTCACACCTATGATCACTaGATATTTGACAAAGAAGCT +
Preference number: 3 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICHTYDH*IFDKEA
Trigger: AGCTTCTTTGTCAAATATCAAGTGATCATAGGTGTG...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTATGCTGAAAATGCATTaGACAAAATTCAGCATCCCT +
Preference number: 3 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICMLKMH*TKFSIP
Trigger: AGGGATGCTGAATTTTGTCAAATGCATTTTCAGCAT...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GACAAACCCTTAGCCAGACTCACTAGAGGACACAGGGAAAGCATTCTAATTAACAAACTGACCATACAATaGGTCACAAAACAGGTCTCA +
Preference number: 3 (lower is better)
Translates to: DKPLARLTRGHRESILINKLTIQ*VTKQVS
Trigger: TGAGACCTGTTTTGTGACCAATTGTATGGTCAGTTT...GTTAATTAGAATGCTTTCCCTGTGTCCTCTAGTGAGTCTGGCTAAGGGTTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp AAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCACACAACCTCTTGTGTaGCATCTGTCTGTCATTCAT +
Preference number: 3 (lower is better)
Translates to: KGAKTIQWKKDSIFNKWCTQPLV*HLSVIH
Trigger: ATGAATGACAGACAGATGCAACACAAGAGGTTGTGT...GCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp CCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACTAACACAACCTCTTGTGTaGCATCTGTCTGTCATTCAT +
Preference number: 3 (lower is better)
Translates to: PDAPQQRNGYRKCGTFTLTQPLV*HLSVIH
Trigger: ATGAATGACAGACAGATGCAACACAAGAGGTTGTGT...TAGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp ATGAAAGTGGTTCTAAAAGGCAGATTCATAGATAGGACTGAGTGCCTACCCTTAGAGCTGACCATGGGCTaGGAATTCAGTAAGAATGTT +
Preference number: 3 (lower is better)
Translates to: MKVVLKGRFIDRTECLPLELTMG*EFSKNV
Trigger: AACATTCTTACTGAATTCCAAGCCCATGGTCAGCTC...TAAGGGTAGGCACTCAGTCCTATCTATGAATCTGCCTTTTAGAACCACTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp CCCAGCATTTTACTGTATACAGGAAATGCACCTCAATaGAAACGACAGACACTACCTCAGAGTAAAAGGTTG +
Preference number: 3 (lower is better)
Translates to: PSILLYTGNAPQ*KRQTLPQSKRL
Trigger: CAACCTTTTACTCTGAGGTAGTGTCTGTCGTTTTCATTGAGGTGCATTTCCTGTATACAGTAAAATGCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp CCATGGAAGGAGTTACAGAGACAAAATTTGGAAGTGTaGCAAAAGGATGGACCATCTAGTGATTGCCATATC +
Preference number: 3 (lower is better)
Translates to: PWKELQRQNLEV*QKDGPSSDCHI
Trigger: GATATGGCAATCACTAGATGGTCCATCCTTTTGTCACACTTCCAAATTTTGTCTCTGTAACTCCTTCCATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp CAGAACAGCAATGGCTTGCGCTGTAAGATTGAGAATTaGCAAATGGGACCTAATGAAACTCCAAAGTTTCTG +
Preference number: 3 (lower is better)
Translates to: QNSNGLRCKIEN*QMGPNETPKFL
Trigger: CAGAAACTTTGGAGTTTCATTAGGTCCCATTTGTCAATTCTCAATCTTACAGCGCAAGCCATTGCTGTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp AGTTGTCGTGAGTGTGTTCAAAAACAATGGAAAACCTaGATACACATGGAAGATGATCAATGCCCTGCTCAA +
Preference number: 3 (lower is better)
Translates to: SCRECVQKQWKT*IHMEDDQCPAQ
Trigger: TTGAGCAGGGCATTGATCATCTTCCATGTGTATGCAGGTTTTCCATTGTTTTTGAACACACTCACGACAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp GTTATCTCTGCATTTAGAGAACTCACTTGGAGATCCTaGTTCAACTGGACCATCATTTTGTTTCCTGAAGAG +
Preference number: 3 (lower is better)
Translates to: VISAFRELTWRS*FNWTIILFPEE
Trigger: CTCTTCAGGAAACAAAATGATGGTCCAGTTGAAGCAGGATCTCCAAGTGAGTTCTCTAAATGCAGAGATAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CCA 72 bp ATCATCAGAACCCAATTCTCCCACTATAGCAAGTCCTaGATACACCATCATAGCAGAAAAGCAAGATTCAGA +
Preference number: 3 (lower is better)
Translates to: IIRTQFSHYSKS*IHHHSRKARFR
Trigger: TCTGAATCTTGCTTTTCTGCTATGATGGTGTATCCAGGACTTGCTATAGTGGGAGAATTGGGTTCTGATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp GACACCGTCAATAAGACAAAAAGACCACCAACAGATTaGGAAAGGATCCTTACCTATCCTAAATCTTTTGGG +
Preference number: 3 (lower is better)
Translates to: DTVNKTKRPPTD*ERILTYPKSFG
Trigger: CCCAAAAGATTTAGGATAGGTAAGGATCCTTTCCCAATCTGTTGGTGGTCTTTTTGTCTTATTGACGGTGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp GACTTCAACACACCACTTTCACCAATGGACAGATCATaGAAACAGAAACTAAACAGGGACACAGTGAAACTA +
Preference number: 3 (lower is better)
Translates to: DFNTPLSPMDRS*KQKLNRDTVKL
Trigger: TAGTTTCACTGTGTCCCTGTTTAGTTTCTGTTTCCATGATCTGTCCATTGGTGAAAGTGGTGTGTTGAAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp CCTGCATACACATGGAAGATGATCAATGCCCTGCTCAATGATAACTTGGTCAAATTGCGCACTTTGGCATaGATATTTTATGGGTATGCA +
Preference number: 3 (lower is better)
Translates to: PAYTWKMINALLNDNLVKLRTLA*IFYGYA
Trigger: TGCATACCCATAAAATATCAATGCCAAAGTGCGCAA...TTTGACCAAGTTATCATTGAGCAGGGCATTGATCATCTTCCATGTGTATGCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGATGGTCTTGTTTGGACTaGGTGGGAGAGGATATATCT +
Preference number: 3 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRWSCLD*VGEDIS
Trigger: AGATATATCCTCTCCCACCAAGTCCAAACAAGACCA...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACAAAAACCCAGATACTATaGTGGATGCCAAGAAGTGCA +
Preference number: 3 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTKTQIL*WMPRSA
Trigger: TGCACTTCTTGGCATCCACAATAGTATCTGGGTTTT...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GACAAACCCTTAGCCAGACTCACTAGAGGACACAGGGAAAGCATTCTAATTAACATGCTGAAAATGCATTaGACAAAATTCAGCATCCCT +
Preference number: 3 (lower is better)
Translates to: DKPLARLTRGHRESILINMLKMH*TKFSIP
Trigger: AGGGATGCTGAATTTTGTCAAATGCATTTTCAGCAT...GTTAATTAGAATGCTTTCCCTGTGTCCTCTAGTGAGTCTGGCTAAGGGTTTGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp CCTGCATACACATGGAAGATGATCAATGCCCTGCTCAATGATAACTTGGTCAAAAAACTGACCATACAATaGGTCACAAAACAGGTCTCA +
Preference number: 3 (lower is better)
Translates to: PAYTWKMINALLNDNLVKKLTIQ*VTKQVS
Trigger: TGAGACCTGTTTTGTGACCAATTGTATGGTCAGTTT...TTTGACCAAGTTATCATTGAGCAGGGCATTGATCATCTTCCATGTGTATGCAGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAGCAAAGAGAGGCCCATaGGACTTGCCAACTTTTTAT +
Preference number: 3 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRAKRGP*DLPTFY
Trigger: ATAAAAAGTTGGCAAGTCCAATGGGCCTCTCTTTGC...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp AAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGCTGGCACAACTGGTaGTTATCATGTAGAAGATTT +
Preference number: 3 (lower is better)
Translates to: KGAKTIQWKKDSIFNKWCCWHNW*LSCRRF
Trigger: AAATCTTCTACATGATAACAACCAGTTGTGCCAGCA...GCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACAGCATACATTAGCAGCTaGACAACACACCTAAAAGCT +
Preference number: 3 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTAYISS*TTHLKA
Trigger: AGCTTTTAGGTGTGTTGTCAAGCTGCTAATGTATGC...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAGAGCTGACCATGGGCTaGGAATTCAGTAAGAATGTT +
Preference number: 3 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRELTMG*EFSKNV
Trigger: AACATTCTTACTGAATTCCAAGCCCATGGTCAGCTC...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACACTGACTTTCTCTCAGTaGTTTTATTGTCCAGTTCCT +
Preference number: 3 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTLTFSQ*FYCPVP
Trigger: AGGAACTGGACAATAAAACAACTGAGAGAAAGTCAG...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp CATCATCACCTCATGATACTTTGCGCACTTTGGCATTaGTATTTTATGGGTATGCATGTGAGGGGTATTCTT +
Preference number: 3 (lower is better)
Translates to: HHHLMILCALWH*YFMGMHVRGIL
Trigger: AAGAATACCCCTCACATGCATACCCATAAAATATCAATGCCAAAGTGCGCAAAGTATCATGAGGTGATGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp AGTTCCAAATACCCAAGATACAACTCACAGACCACATaGATCTCAAGAAGGAATACCAAAGTGTCAGTGCTT +
Preference number: 3 (lower is better)
Translates to: SSKYPRYNSQTT*ISRRNTKVSVL
Trigger: AAGCACTGACACTTTGGTATTCCTTCTTGAGATTCATGTGGTCTGTGAGTTGTATCTTGGGTATTTGGAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp CAAAAGGCTATACTCAACAAAACTGGAGAACCTGGATaGAATGGAGAAGTTTCTAGACAGATACCAGATACC +
Preference number: 3 (lower is better)
Translates to: QKAILNKTGEPG*NGEVSRQIPDT
Trigger: GGTATCTGGTATCTGTCTAGAAACTTCTCCATTTCATCCAGGTTCTCCAGTTTTGTTGAGTATAGCCTTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp AAAAGCAGAAAATGTTCTGCCTGTCAATTTCCCACATaGTCAGCAAACCTTGACAACATCATCATCATCATC +
Preference number: 3 (lower is better)
Translates to: KSRKCSACQFPT*SANLDNIIIII
Trigger: GATGATGATGATGATGTTGTCAAGGTTTGCTGAGCATGTGGGAAATTGACAGGCAGAACATTTTCTGCTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp ATCGAAGAAGATCTCAGAAGATGGAAAGATCCCCCATaGTCATGGATTGGCAGGACTAATATAGTAAAAATG +
Preference number: 3 (lower is better)
Translates to: IEEDLRRWKDPP*SWIGRTNIVKM
Trigger: CATTTTTACTATATTAGTCCTGCCAATCCATGAGCATGGGGGATCTTTCCATCTTCTGAGATCTTCTTCGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp GTGGTTCTAAAAGGCAGATTCATAGATAGGACTGAGTaGCTACCCTTAAAAGAAATTGGAAGACCTCATACT +
Preference number: 3 (lower is better)
Translates to: VVLKGRFIDRTE*LPLKEIGRPHT
Trigger: AGTATGAGGTCTTCCAATTTCTTTTAAGGGTAGGCACTCAGTCCTATCTATGAATCTGCCTTTTAGAACCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp AGTCTCAACAGACACAAGAAAATTGACATAACACCCTaGATCCTATCTTACTACCACAGATTTCAGCTGGAT +
Preference number: 3 (lower is better)
Translates to: SLNRHKKIDITP*ILSYYHRFQLD
Trigger: ATCCAGCTGAAATCTGTGGTAGTAAGATAGGATGCAGGGTGTTATGTCAATTTTCTTGTGTCTGTTGAGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp CTGAGGCACTATGAAAAGACCAAACCTAAGAACAATTaGAATAAAAGAAGGGAGGATTCCCAGATCAAAGGT +
Preference number: 3 (lower is better)
Translates to: LRHYEKTKPKNN*NKRREDSQIKG
Trigger: ACCTTTGATCTGGGAATCCTCCCTTCTTTTATTCCAATTGTTCTTAGGTTTGGTCTTTTCATAGTGCCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp TACTACAGAGCAATTTTGATAAAACCTGCATGGTACTaGTATAGCGACAGACAAGTAGACCAATGGAACAGA +
Preference number: 3 (lower is better)
Translates to: YYRAILIKPAWY*YSDRQVDQWNR
Trigger: TCTGTTCCATTGGTCTACTTGTCTGTCGCTATACCAGTACCATGCAGGTTTTATCAAAATTGCTCTGTAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp AAGATGTACTACAGAGCAATTTTGATAAAACCTGCATaGTACTGGTATAGCGACAGACAAGTAGACCAATGG +
Preference number: 3 (lower is better)
Translates to: KMYYRAILIKPA*YWYSDRQVDQW
Trigger: CCATTGGTCTACTTGTCTGTCGCTATACCAGTACCATGCAGGTTTTATCAAAATTGCTCTGTAGTACATCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp CCTTCTTCTCACATCTCATGGAATGTTCTACAAAACTaGCCACAATATCAAATGCAAAGCAAGTCTCAACAG +
Preference number: 3 (lower is better)
Translates to: PSSHISWNVLQN*PQYQMQSKSQQ
Trigger: CTGTTGAGACTTGCTTTGCATTTGATATTGTGGCCAGTTTTGTAGAACATTCCATGAGATGTGAGAAGAAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp ATGAAAGTGGTTCTAAAAGGCAGATTCATAGATAGGACTGAGTGCCTACCCTTAGAAGCCACAATTACTTaGATACCTAAACCACACAAA +
Preference number: 3 (lower is better)
Translates to: MKVVLKGRFIDRTECLPLEATIT*IPKPHK
Trigger: TTTGTGTGGTTTAGGTATCAAAGTAATTGTGGCTTC...TAAGGGTAGGCACTCAGTCCTATCTATGAATCTGCCTTTTAGAACCACTTTCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGGCAAAGAGAGGCCCATaGGACTTGCCAACTTTTTAT +
Preference number: 3 (lower is better)
Translates to: VTFRIASSITLSLRIKAKAKRGP*DLPTFY
Trigger: ATAAAAAGTTGGCAAGTCCAATGGGCCTCTCTTTGC...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGGCTTGCGCTGTAAGATaGAGAATTGACAAATGGGAC +
Preference number: 3 (lower is better)
Translates to: VTFRIASSITLSLRIKAKACAVR*RIDKWD
Trigger: GTCCCATTTGTCAATTCTCAATCTTACAGCGCAAGC...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp CCCAAGTCATTTGTGTTTTGTCCTAAGTATCTCACTTaGTCTGTCTTTCAGATACCTTGTGAACCACAAAGA +
Preference number: 3 (lower is better)
Translates to: PKSFVFCPKYLT*SVFQIPCEPQR
Trigger: TCTTTGTGGTTCACAAGGTATCTGAAAGACAGATCAAGTGAGATACTTAGGACAAAACACAAATGACTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp TCAAAAACAATGGAAAACCTGCATACACATGGAAGATaGTCAATGCCCTGCTCAATGATAACTTGGTCAAAG +
Preference number: 3 (lower is better)
Translates to: SKTMENLHTHGR*SMPCSMITWSK
Trigger: CTTTGACCAAGTTATCATTGAGCAGGGCATTGATCATCTTCCATGTGTATGCAGGTTTTCCATTGTTTTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp TCAAAGGTAAAATCCTCCAAGAGGAACTATCAATTCTaGATATCTATGCTCCAAATACAAGGGCAGCCACAT +
Preference number: 3 (lower is better)
Translates to: SKVKSSKRNYQF*ISMLQIQGQPH
Trigger: ATGTGGCTGCCCTTGTATTTGGAGCATAGATATTCAGAATTGATAGTTCCTCTTGGAGGATTTTACCTTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp TGGGCTTGGAATTCAGTAAGAATGTTGCCTATTCAGTaGCATTCAGAATTGCCTCTAGTATTACACTATCAC +
Preference number: 3 (lower is better)
Translates to: WAWNSVRMLPIQ*HSELPLVLHYH
Trigger: GTGATAGTGTAATACTAGAGGCAATTCTGAATGTCACTGAATAGGCAACATTCTTACTGAATTCCAAGCCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp GAAGCAATCCCACTAAAATCAGAGACTAGACAAAGCTaGCCACTCTCTCCCTATCTATTCAATATAGTATTT +
Preference number: 3 (lower is better)
Translates to: EAIPLKSETRQS*PLSPYLFNIVF
Trigger: AAATACTATATTGAATAGATAGGGAGAGAGTGGGCAGCTTTGTCTAGTCTCTGATTTTAGTGGGATTGCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp ATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATaGTCAGGGATCGGCAGGATCAATATAGTAAAAATG +
Preference number: 3 (lower is better)
Translates to: IKEDLRRWKDLP*SGIGRINIVKM
Trigger: CATTTTTACTATATTGATCCTGCCGATCCCTGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp ACAAACTGGCTACACAAACAAGACCCAACATTTTGCTaGTTACAGGAAACTCAACTCAGAGAAAAAGATAGA +
Preference number: 3 (lower is better)
Translates to: TNWLHKQDPTFC*LQETQLREKDR
Trigger: TCTATCTTTTTCTCTGAGTTGAGTTTCCTGTAAGCAGCAAAATGTTGGGTCTTGTTTGTGTAGCCAGTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp CTAACAAACTGGCTACACAAACAAGACCCAACATTTTaGTGCTTACAGGAAACTCAACTCAGAGAAAAAGAT +
Preference number: 3 (lower is better)
Translates to: LTNWLHKQDPTF*CLQETQLREKD
Trigger: ATCTTTTTCTCTGAGTTGAGTTTCCTGTAAGCAGCAAAATGTTGGGTCTTGTTTGTGTAGCCAGTTTGTTAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp GACACTGTCAATAGGACAAAACAGCAACCAACAGACTaGGAAAAGATCTTTACCAATCCTACATCATATAGA +
Preference number: 3 (lower is better)
Translates to: DTVNRTKQQPTD*EKIFTNPTSYR
Trigger: TCTATATGATGTAGGATTGGTAAAGATCTTTTCCCAGTCTGTTGGTTGCTGTTTTGTCCTATTGACAGTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp CCATACCTATTTCCTTGTACTAAGGTCAAATCTAAGTaGATCAAGGAACTTCACATAAAACCAGAGACACTG +
Preference number: 3 (lower is better)
Translates to: PYLFPCTKVKSK*IKELHIKPETL
Trigger: CAGTGTCTCTGGTTTTATGTGAAGTTCCTTGATCCACTTAGATTTGACCTTAGTACAAGGAAATAGGTATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp CAGGAAATCCAGGACACAATGAGAAGACCAAACCTATaGATAATAGGAGTGGATGAGAATGAAGATTTTCAA +
Preference number: 3 (lower is better)
Translates to: QEIQDTMRRPNL*IIGVDENEDFQ
Trigger: TTGAAAATCTTCATTCTCATCCACTCCTATTATCCATAGGTTTGGTCTTCTCATTGTGTCCTGGATTTCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGAAAACCCAGATACTATaGTGGATGCCAAGAAGTGCA +
Preference number: 3 (lower is better)
Translates to: VTFRIASSITLSLRIKAKKTQIL*WMPRSA
Trigger: TGCACTTCTTGGCATCCACAATAGTATCTGGGTTTT...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp CTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTGCTCTACACAAAGGACAGTAAAAATGGCCATCTaGCCAAAAGCAATCTACAGA +
Preference number: 3 (lower is better)
Translates to: LDIKLTQTSQWPCSTQRTVKMAI*PKAIYR
Trigger: TCTGTAGATTGCTTTTGGCAAGATGGCCATTTTTAC...TGTCCTTTGTGTAGAGCAAGGCCATTGACTTGTTTGAGTTAATTTTATATCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GGTGTGTCACCTAACTTCCCTATTTTCTTCTGTATAAAAACTTTGATGCTGAGTTGCTGGCACAACTGGTaGTTATCATGTAGAAGATTT +
Preference number: 3 (lower is better)
Translates to: GVSPNFPIFFCIKTLMLSCWHNW*LSCRRF
Trigger: AAATCTTCTACATGATAACAACCAGTTGTGCCAGCA...ACTCAGCATCAAAGTTTTTATACAGAAGAAAATAGGGAAGTTAGGTGACACACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGACAAGACCCAACATTTaGCTGCTTACAGGAAACTCA +
Preference number: 3 (lower is better)
Translates to: VTFRIASSITLSLRIKAKTRPNI*LLTGNS
Trigger: TGAGTTTCCTGTAAGCAGCAAAATGTTGGGTCTTGT...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR TCA 72 bp TCAAAGGAAATATCTACCAAGAAGAACTCTCAATTCTaGACATCTATGCTCCAAATGCAAGTGTACCCACAT +
Preference number: 3 (lower is better)
Translates to: SKEISTKKNSQF*TSMLQMQVYPH
Trigger: ATGTGGGTACACTTGCATTTGGAGCATAGATGTTCAGAATTGAGAGTTCTTCTTGGTAGATATTTCCTTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp CTTACACTATATCTTTCCACAAATCCAACCCTACAATaGATAATAGATGGAAAACACCAACATAAGGAGGGA +
Preference number: 3 (lower is better)
Translates to: LTLYLSTNPTLQ*IIDGKHQHKEG
Trigger: TCCCTCCTTATGTTGGTGTTTTCCATCTATTATCCATTGTAGGGTTGGATTTGTGGAAAGATATAGTGTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp AAAATAAGAGCACAATCTACAATAGCCAGAGCAATATaGGACCATCACAGCTCAGCTATCCTTAATATTCTA +
Preference number: 3 (lower is better)
Translates to: KIRAQSTIARAI*DHHSSAILNIL
Trigger: TAGAATATTAAGGATAGCTGAGCTGTGATGGTCCCATATTGCTCTGGCTATTGTAGATTGTGCTCTTATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp CAAGCTGTACCACAGAGCAATACTGATAAAACAAACAAACAAACAAAAACTGCAACCATTCTTACATCCTaGTACAAAGTTCAAGTCCGA +
Preference number: 3 (lower is better)
Translates to: QAVPQSNTDKTNKQTKTATILTS*YKVQVR
Trigger: TCGGACTTGAACTTTGTACAAGGATGTAAGAATGGT...TGCAGTTTTTGTTTGTTTGTTTGTTTTATCAGTATTGCTCTGTGGTACAGCTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GGTGTGTCACCTAACTTCCCTATTTTCTTCTGTATAAAAACTTTGATGCTGAGTTTTTCAACAGCTTTATaGCAGAAATGCCTTGATGCT +
Preference number: 3 (lower is better)
Translates to: GVSPNFPIFFCIKTLMLSFSTAL*QKCLDA
Trigger: AGCATCAAGGCATTTCTGCAATAAAGCTGTTGAAAA...ACTCAGCATCAAAGTTTTTATACAGAAGAAAATAGGGAAGTTAGGTGACACACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGGAAGCCACAATTACTTaGATACCTAAACCACACAAA +
Preference number: 3 (lower is better)
Translates to: VTFRIASSITLSLRIKAKEATIT*IPKPHK
Trigger: TTTGTGTGGTTTAGGTATCAAAGTAATTGTGGCTTC...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGTACTACAGAGCAATTTaGATAAAACCTGCATGGTAC +
Preference number: 3 (lower is better)
Translates to: VTFRIASSITLSLRIKAKYYRAI*IKPAWY
Trigger: GTACCATGCAGGTTTTATCAAAATTGCTCTGTAGTA...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR-3UTR CAA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGTCAAGGGGATACAAATaGGAAAGGAAGAAGTCAAAA +
Preference number: 3 (lower is better)
Translates to: VTFRIASSITLSLRIKAKSRGYK*ERKKSK
Trigger: TTTTGACTTCTTCCTTTCCAATTTGTATCCCCTTGA...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR GCA 72 bp GTTAGAATATCTAAGAAAGAGATCAGGAGTCATAGATaGAAGCATCACCAACAGAACACAAAAGATAGAAGA +
Preference number: 3 (lower is better)
Translates to: VRISKKEIRSHR*KHHQQNTKDRR
Trigger: TCTTCTATCTTTTGTGTTCTGTTGGTGATGCTTGCATCTATGACTCCTGATCTCTTTCTTAGATATTCTAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp GACTTCTCACAAAAGACTATGAAAGCTAGAAGATTTTaGGCAGAGGTTATAAAGACCCTAAGAGAACATAAA +
Preference number: 3 (lower is better)
Translates to: DFSQKTMKARRF*AEVIKTLREHK
Trigger: TTTATGTTCTCTTAGGGTCTTTATAACCTCTGCCCAAAATCTTCTAGCTTTCATAGTCTTTTGTGAGAAGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp CAGAGACAAAAGAATATACCTTCTTCTCACATCTCATaGAATGTTCTACAAAACTGGCCACAATATCAAATG +
Preference number: 3 (lower is better)
Translates to: QRQKNIPSSHIS*NVLQNWPQYQM
Trigger: CATTTGATATTGTGGCCAGTTTTGTAGAACATTCCATGAGATGTGAGAAGAAGGTATATTCTTTTGTCTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp AATACTGATAAAACAAACAAACAAACAAAAACTGCATaGTATTGGTACAGAGAAAGGCAGGAAGATCAATGG +
Preference number: 3 (lower is better)
Translates to: NTDKTNKQTKTA*YWYRERQEDQW
Trigger: CCATTGATCTTCCTGCCTTTCTCTGTACCAATACCATGCAGTTTTTGTTTGTTTGTTTGTTTTATCAGTATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CCA 72 bp TATACTCATACCCTATTCCCGGGTAAGTCTGGTATATaGATCCATGTGCTCTCTTTTAGTATTATTTTATTA +
Preference number: 3 (lower is better)
Translates to: YTHTLFPGKSGI*IHVLSFSIILL
Trigger: TAATAAAATAATACTAAAAGAGAGCACATGGATCCATATACCAGACTTACCCGGGAATAGGGTATGAGTATA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp CCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATaGGTCAGTCTACCGGCACCTTACTTTGCATGCACC +
Preference number: 4 (lower is better)
Translates to: PQHWGGLCVLLG*VSLPAPYFACT
Trigger: GGTGCATGCAAAGTAAGGTGCCGGTAGACTGACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR GCA 90 bp ACTGGGACAAAAGGGATCCAGAGATGCAGGAACCCCTGCTCGACCCAGTGGCTAGTGTGGCTCGAGTACTaGTCCTTGGGGCACAGAAGG +
Preference number: 4 (lower is better)
Translates to: TGTKGIQRCRNPCSTQWLVWLEY*SLGHRR
Trigger: CCTTCTGTGCCCCAAGGAGCAGTACTCGAGCCACAC...TAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR GCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTCCCAATGAGCCACCTTaGTGTCCCTGGGGAAACTTG +
Preference number: 4 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGPNEPP*CPWGNL
Trigger: CAAGTTTCCCCAGGGACAGCAAGGTGGCTCATTGGG...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
CDS-3UTR CCA 90 bp ACTGGGACAAAAGGGATCCAGAGATGCAGGAACCCCTGCTCGACCCAGTGGCTAGCACACAGAAGAAGTTaGCTCCAGAACCCTCATGGC +
Preference number: 4 (lower is better)
Translates to: TGTKGIQRCRNPCSTQWLAHRRS*LQNPHG
Trigger: GCCATGAGGGTTCTGGAGCCAACTTCTTCTGTGTGC...TAGCCACTGGGTCGAGCAGGGGTTCCTGCATCTCTGGATCCCTTTTGTCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
3UTR CAA 72 bp AGCCCTGCTGCTGTGATACAGAAGGCCAAATGTGCCTaGCAACACCTGGGAAATGCCTGGTATGGTCAGGGC +
Preference number: 4 (lower is better)
Translates to: SPAAVIQKAKCA*QHLGNAWYGQG
Trigger: GCCCTGACCATACCAGGCATTTCCCAGGTGTTGCAAGGCACATTTGGCCTTCTGTATCACAGCAGCAGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
CDS-3UTR CCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTATACCACAGCAAAGATaGTCTGACGGAGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGIPQQR*SDGGGR
Trigger: CCTGCCTCCTCCGTCAGACCATCTTTGCTGTGGTAT...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
3UTR CAA 72 bp GACACACACCTTCTCTGGAGCATCTCACACTGCCTATaGTGCTGTACCTGGTGGCCTTGCCTTAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: DTHLLWSISHCL*CCTWWPCLNQA
Trigger: TGCCTGGTTAAGGCAAGGCCACCAGGTACAGCACAATAGGCAGTGTGAGATGCTCCAGAGAAGGTGTGTGTC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
CDS-3UTR TCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTCATCATGGGCAAGAATaGTCACCCAGGACCATTGAA +
Preference number: 4 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGHHGQE*SPRTIE
Trigger: TTCAATGGTCCTGGGTGATCATTCTTGCCCATGATG...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTGCTGGCATGTGTAGTTaGGGATGGGCTCCTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICAGMCS*GWAPPA
Trigger: GGCAGGAGGAGCCCATCCCCAACTACACATGCCAGC...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR TCA 90 bp GACAAACCCTTAGCCAGACTCACTAGAGGACACAGGGAAAGCATTCTAATTAACCCTCATGGCATTGGATaGCAGTGTGCCGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: DKPLARLTRGHRESILINPHGIG*QCAGAL
Trigger: CAGAGCCCCGGCACACTGTCATCCAATGCCATGAGG...GTTAATTAGAATGCTTTCCCTGTGTCCTCTAGTGAGTCTGGCTAAGGGTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR GCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTTCAAAGCGAGGACTCTaGCTTGGAATTATCCAGACT +
Preference number: 4 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGSKRGL*LGIIQT
Trigger: AGTCTGGATAATTCCAAGGCAGAGTCCTCGCTTTGA...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp GACAAACCCTTAGCCAGACTCACTAGAGGACACAGGGAAAGCATTCTAATTAACCTGGATCCTGCTTCGTaGCCTGGTGACTCGGAAGGC +
Preference number: 4 (lower is better)
Translates to: DKPLARLTRGHRESILINLDPAS*PGDSEG
Trigger: GCCTTCCGAGTCACCAGGCCACGAAGCAGGATCCAG...GTTAATTAGAATGCTTTCCCTGTGTCCTCTAGTGAGTCTGGCTAAGGGTTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
3UTR CAA 72 bp TTGGTCAAACCAGGATCTCAGGGTCCAAGAGGCAGCTaGACTCCCAGGAACTCTGAAACACTCAGGATCTCA +
Preference number: 4 (lower is better)
Translates to: LVKPGSQGPRGS*TPRNSETLRIS
Trigger: TGAGATCCTGAGTGTTTCAGAGTTCCTGGGAGTCAAGCTGCCTCTTGGACCCTGAGATCCTGGTTTGACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp GATCAGAGGATCACAGGATTACAGAATCTCAGGAGGTaGGTCAAACCAGGATCTCAGGGTCCAAGAGGCAGC +
Preference number: 4 (lower is better)
Translates to: DQRITGLQNLRR*VKPGSQGPRGS
Trigger: GCTGCCTCTTGGACCCTGAGATCCTGGTTTGACCAACCTCCTGAGATTCTGTAATCCTGTGATCCTCTGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR TCA 90 bp TTGGTGGCAGGACTGCAAACTGGTAGAACTACTCTGGAAATCAGTTTGGCGGTTAGCAATGAGGACCACTaGGGTAGAAGCACCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LVAGLQTGRTTLEISLAVSNEDH*GRSTRA
Trigger: AGCTCTGGTGCTTCTACCTCAGTGGTCCTCATTGCT...AACCGCCAAACTGATTTCCAGAGTAGTTCTACCAGTTTGCAGTCCTGCCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTATGAAGGATGGAAACTaGATCTTGTCACTCAGACTG +
Preference number: 4 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGMKDGN*ILSLRL
Trigger: CAGTCTGAGTGACAAGATCCAGTTTCCATCCTTCAT...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
3UTR CAA 72 bp TGCCAAGAAGTGCATGCTGAAAGGAGCCTGGTATGGTaGTCTCTTGAGATGCCCTGCCAGAGCCTTACAAAT +
Preference number: 4 (lower is better)
Translates to: CQEVHAERSLVW*SLEMPCQSLTN
Trigger: ATTTGTAAGGCTCTGGCAGGGCATCTCAAGAGACAACCATACCAGGCTCCTTTCAGCATGCACTTCTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp GCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTaGGTGGGATTGCAGGCTTGTACAACCACTATGGAA +
Preference number: 4 (lower is better)
Translates to: AWMWRKRNTPPL*VGLQACTTTME
Trigger: TTCCATAGTGGTTGTACAAGCCTGCAATCCCACCAACAATGGAGGAGTGTTCCTCTTTCTCCACATCCACGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp TGCCAAAGCAACACAGCTTCTGAGAAAGGTCCTGTTTaGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: CQSNTASEKGPV*GLLLQPGGCPN
Trigger: GTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAGGACCTTTCTCAGAAGCTGTGTTGCTTTGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp TCGAATTCTTTTCAACAGCTTTATTGCAGAAATGCCTaGATGCTACGGGAACCCCGGGAACCCAGGGAGGAC +
Preference number: 4 (lower is better)
Translates to: SNSFQQLYCRNA*MLREPREPRED
Trigger: GTCCTCCCTGGGTTCCCGGGGTTCCCGTAGCATCAAGGCATTTCTGCAATAAAGCTGTTGAAAAGAATTCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp TGTGCAGAACTGGACACCCTCTGTCACTGTGCTGTTTaGGTAGGGCCATGTACAATCAAAGGTGAACTCCCA +
Preference number: 4 (lower is better)
Translates to: CAELDTLCHCAV*VGPCTIKGELP
Trigger: TGGGAGTTCACCTTTGATTGTACATGGCCCTACCAAAACAGCACAGTGACAGAGGGTGTCCAGTTCTGCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CAA 72 bp TATGAAGCAGCTGCCAGGAATGGAAGTTGTGAGAGTTaGTACCTTTCCTCTCCTGGTGCTCACAGGCTAGCA +
Preference number: 4 (lower is better)
Translates to: YEAAARNGSCES*YLSSPGAHRLA
Trigger: TGCTAGCCTGTGAGCACCAGGAGAGGAAAGGTACAAACTCTCACAACTTCCATTCCTGGCAGCTGCTTCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
CDS-3UTR TCA 90 bp AGCTGGACTCTGGAGAGTTTTGGCATAACCAGGAACACAGGAAGGACAGGCTACCAGGAATGGAAGTTGTaGGAGTTTGTACCTTTCCTC +
Preference number: 4 (lower is better)
Translates to: SWTLESFGITRNTGRTGYQEWKL*EFVPFL
Trigger: GAGGAAAGGTACAAACTCTCACAACTTCCATTCCTG...GTAGCCTGTCCTTCCTGTGTTCCTGGTTATGCCAAAACTCTCCAGAGTCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR TCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTGGAACTTGGTCTCATTaGAGACATCTGGAAGGCCCC +
Preference number: 4 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICGTWSH*RHLEGP
Trigger: GGGGCCTTCCAGATGTCTTCAATGAGACCAAGTTCC...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp CCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACTAACAGCCCCAGAAGTCTaGCCATGGAGACAGACAGGG +
Preference number: 4 (lower is better)
Translates to: PDAPQQRNGYRKCGTFTLTAPEV*PWRQTG
Trigger: CCCTGTCTGTCTCCATGGCCAGACTTCTGGGGCTGT...TAGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp TTGGTGGCAGGACTGCAAACTGGTAGAACTACTCTGGAAATCAGTTTGGCGGTTGCGAGGACTCTGCCTTaGAATTATCCAGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: LVAGLQTGRTTLEISLAVARTLP*NYPDSW
Trigger: CCAAGAGTCTGGATAATTCCAAGGCAGAGTCCTCGC...AACCGCCAAACTGATTTCCAGAGTAGTTCTACCAGTTTGCAGTCCTGCCACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp ACACCTGCAGGAGTCTTCTTCCCTTGGAAAATGTCAAATTGTGTCACCAAATCTCCACCTTGCTGTCCCTaGGGAAACTTGTACAGCCCC +
Preference number: 4 (lower is better)
Translates to: TPAGVFFPWKMSNCVTKSPPCCP*GNLYSP
Trigger: GGGGCTGTACAAGTTTCCCCAGGGACAGCAAGGTGG...AGATTTGGTGACACAATTTGACATTTTCCAAGGGAAGAAGACTCCTGCAGGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
3UTR CAA 72 bp GAAAACCCAGAGATGAACCCACACACCTATGGTCACTaGATCTTCGACAAGGGAGCTAAAACCATCCAGTGG +
Preference number: 4 (lower is better)
Translates to: ENPEMNPHTYGH*IFDKGAKTIQW
Trigger: CCACTGGATGGTTTTAGCTCCCTTGTCGAAGATCAAGTGACCATAGGTGTGTGGGTTCATCTCTGGGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR GCA 90 bp AACCCAAGAAACCCAGCACACAGAAGAAGTTGGCTCCAGAACCCTCATGGCATTTCAAAGCGAGGACTCTaGCTTGGAATTATCCAGACT +
Preference number: 4 (lower is better)
Translates to: NPRNPAHRRSWLQNPHGISKRGL*LGIIQT
Trigger: AGTCTGGATAATTCCAAGGCAGAGTCCTCGCTTTGA...AATGCCATGAGGGTTCTGGAGCCAACTTCTTCTGTGTGCTGGGTTTCTTGGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
CDS-3UTR CCA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACAGGGTCAACATCTGTGTaGCCAGAGAGCTGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTGSTSV*PESWPA
Trigger: AGCAGGCCAGCTCTCTGGCCACACAGATGTTGACCC...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR TCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAGCAGAGTGTCCATGCTaGCCCACACCTGTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRAECPC*PTPVLR
Trigger: TCTCAGGACAGGTGTGGGTCAGCATGGACACTCTGC...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR TCA 90 bp CTGTTTTGGGCCTTCTTCTTCAGCCAGGAGGATGTCCAAACACAAGATATCTGTACATTTCTGAGGTTATaGAGCAGCTGCCAGGAATGG +
Preference number: 4 (lower is better)
Translates to: LFWAFFFSQEDVQTQDICTFLRL*SSCQEW
Trigger: CCATTCCTGGCAGCTGCTTCATAACCTCAGAAATGT...ACAGATATCTTGTGTTTGGACATCCTCCTGGCTGAAGAAGAAGGCCCAAAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR TCA 90 bp CCTGCATACACATGGAAGATGATCAATGCCCTGCTCAATGATAACTTGGTCAAAACAGCAAAGATGGTCTaGCGGAGGAGGCAGGTAGTA +
Preference number: 4 (lower is better)
Translates to: PAYTWKMINALLNDNLVKTAKMV*RRRQVV
Trigger: TACTACCTGCCTCCTCCGTCAGACCATCTTTGCTGT...TTTGACCAAGTTATCATTGAGCAGGGCATTGATCATCTTCCATGTGTATGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR TCA 90 bp CTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTGCTCTACACAAAGGACATGCTTCGTGGCCTGGTaGCTCGGAAGGCCAAGACCA +
Preference number: 4 (lower is better)
Translates to: LDIKLTQTSQWPCSTQRTCFVAW*LGRPRP
Trigger: TGGTCTTGGCCTTCCGAGTCACCAGGCCACGAAGCA...TGTCCTTTGTGTAGAGCAAGGCCATTGACTTGTTTGAGTTAATTTTATATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR GCA 90 bp GACAGCACACCTGAAAGCTCTAGAACAAAAAGAATCAAATACTCCCAAGAGGAGCACCCTCTGTCACTGTaGTGTTTTGGTAGGGCCATG +
Preference number: 4 (lower is better)
Translates to: DSTPESSRTKRIKYSQEEHPLSL*CFGRAM
Trigger: CATGGCCCTACCAAAACAGCACAGTGACAGAGGGTG...CTCCTCTTGGGAGTATTTGATTCTTTTTGTTCTAGAGCTTTCAGGTGTGCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp CCTGCATACACATGGAAGATGATCAATGCCCTGCTCAATGATAACTTGGTCAAAAGAAGATCTCTGTCCTaGGCAGGCAATGGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: PAYTWKMINALLNDNLVKRRSLS*AGNGLW
Trigger: CCAGAGACCATTGCCTGCCCAGGACAGAGATCTTCT...TTTGACCAAGTTATCATTGAGCAGGGCATTGATCATCTTCCATGTGTATGCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp CCTGCATACACATGGAAGATGATCAATGCCCTGCTCAATGATAACTTGGTCAAAGCTCCAGAACCCTCATaGCATTGGATGACAGTGTGC +
Preference number: 4 (lower is better)
Translates to: PAYTWKMINALLNDNLVKAPEPS*HWMTVC
Trigger: GCACACTGTCATCCAATGCCATGAGGGTTCTGGAGC...TTTGACCAAGTTATCATTGAGCAGGGCATTGATCATCTTCCATGTGTATGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
3UTR CAA 72 bp GTCATCATCATGGGCAAGAATGATCACCCAGGACCATaGAAAGTGAATTACCAGCTGGGTAACTGCATGGGA +
Preference number: 4 (lower is better)
Translates to: VIIMGKNDHPGP*KVNYQLGNCMG
Trigger: TCCCATGCAGTTACCCAGCTGGTAATTCACTTTCAATGGTCCTGGGTGATCATTCTTGCCCATGATGATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
CDS-3UTR GCA 90 bp TTGGTGGCAGGACTGCAAACTGGTAGAACTACTCTGGAAATCAGTTTGGCGGTTTCTATCAAGCCTACATaGACCAAGTGGAATACACCT +
Preference number: 4 (lower is better)
Translates to: LVAGLQTGRTTLEISLAVSIKPT*TKWNTP
Trigger: AGGTGTATTCCACTTGGTGCATGTAGGCTTGATAGA...AACCGCCAAACTGATTTCCAGAGTAGTTCTACCAGTTTGCAGTCCTGCCACCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp CTGGATATAAAATTAACTCAAACAAGTCAATGGCCTTGCTCTACACAAAGGACAACAGCCCCAGAAGTCTaGCCATGGAGACAGACAGGG +
Preference number: 4 (lower is better)
Translates to: LDIKLTQTSQWPCSTQRTTAPEV*PWRQTG
Trigger: CCCTGTCTGTCTCCATGGCCAGACTTCTGGGGCTGT...TGTCCTTTGTGTAGAGCAAGGCCATTGACTTGTTTGAGTTAATTTTATATCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp GTGGCAGTAAGTCCACACCACAAGCCCTACACCTGCCAATTTCTCTTAAAGCACAATTCTACTCACTTCTaGAAAGGGATGTGGCTTGTT +
Preference number: 4 (lower is better)
Translates to: VAVSPHHKPYTCQFLLKHNSTHF*KGMWLV
Trigger: AACAAGCCACATCCCTTTCCAGAAGTGAGTAGAATT...GTGCTTTAAGAGAAATTGGCAGGTGTAGGGCTTGTGGTGTGGACTTACTGCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp CCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACTAGCGAGGACTCTGCCTTaGAATTATCCAGACTCTTGG +
Preference number: 4 (lower is better)
Translates to: PDAPQQRNGYRKCGTFTLARTLP*NYPDSW
Trigger: CCAAGAGTCTGGATAATTCCAAGGCAGAGTCCTCGC...TAGTGTAAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGGCATCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp ATCCTCTTTCCCCTAATAGGGTGGTCTTGTTTGGACTaGGTGGGAGAGGATATATCTAGTCCTGTAGTGACT +
Preference number: 4 (lower is better)
Translates to: ILFPLIGWSCLD*VGEDISSPVVT
Trigger: AGTCACTACAGGACTAGATATATCCTCTCCCACCAAGTCCAAACAAGACCACCCTATTAGGGGAAAGAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp GGCAAAGAGTTTCACAGAAACTCACCTCCTGGAGCTTaGGCGTTCTCATTAACCCGTATACTCATACCCTAT +
Preference number: 4 (lower is better)
Translates to: GKEFHRNSPPGA*AFSLTRILIPY
Trigger: ATAGGGTATGAGTATACGGGTTAATGAGAACGCCAAAGCTCCAGGAGGTGAGTTTCTGTGAAACTCTTTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR TCA 90 bp CAACCAAAAGTTATCAAAAAGGATAAGGAAGGACACTTCAGACGGGTCAAAGGAAGGAGACAGCCACTGTaGATACCACAGCAAAGATGG +
Preference number: 4 (lower is better)
Translates to: QPKVIKKDKEGHFRRVKGRRQPL*IPQQRW
Trigger: CCATCTTTGCTGTGGTATTCACAGTGGCTGTCTCCT...TCCTTTGACCCGTCTGAAGTGTCCTTCCTTATCCTTTTTGATAACTTTTGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR TCA 90 bp TCAGAATGGCTAAGTGCAAAAACTCAGGTGACAGCAGATGCTGCCAAGAATGTGGTACCATCAGAAAAGTaGAAGATAGAGAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SEWLSAKTQVTADAAKNVVPSEK*KIEKLP
Trigger: TGGCAGCTTCTCTATCTTTCACTTTTCTGATGGTAC...CACATTCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCACTTAGCCATTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR GCA 90 bp CATGCTCACTGGCAAGCATTTTTACCCATTCAGACATCTTCTAAGTCCTTAACAGAAGGTGATACTCAATaGACACACCAGCTGGGGTCA +
Preference number: 4 (lower is better)
Translates to: HAHWQAFLPIQTSSKSLTEGDTQ*THQLGS
Trigger: TGACCCCAGCTGGTGTGTGCATTGAGTATCACCTTC...TGTTAAGGACTTAGAAGATGTCTGAATGGGTAAAAATGCTTGCCAGTGAGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR GCA 90 bp ATAAAGTTCTTGCTAACCGAATCCAAGAACACATCAAAACAATCATCCATCCTGAGGGCAAGTGCCATGTaGAGAGTGTCCATGCTGACC +
Preference number: 4 (lower is better)
Translates to: IKFLLTESKNTSKQSSILRASAM*RVSMLT
Trigger: GGTCAGCATGGACACTCTGCACATGGCACTTGCCCT...CAGGATGGATGATTGTTTTGATGTGTTCTTGGATTCGGTTAGCAAGAACTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR GCA 90 bp AAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCCAAGTGGAATACACCTaGAGGAGTCTTCTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: KGAKTIQWKKDSIFNKWCQVEYT*RSLLPL
Trigger: CAAGGGAAGAAGACTCCTGCAGGTGTATTCCACTTG...GCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR GCA 90 bp CAAGCTGTACCACAGAGCAATACTGATAAAACAAACAAACAAACAAAAACTGCATGTACCTGGTGGCCTTaGCTTAACCAGGCAGGGGTG +
Preference number: 4 (lower is better)
Translates to: QAVPQSNTDKTNKQTKTACTWWP*LNQAGV
Trigger: CACCCCTGCCTGGTTAAGGCAAGGCCACCAGGTACA...TGCAGTTTTTGTTTGTTTGTTTGTTTTATCAGTATTGCTCTGTGGTACAGCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp GCCAGAAGCTGGAAAGAACCCAGATGTCTCTCAACAGAGGAATGGATACAGAAATTCTGGAAAGGGATGTaGCTTGTTTTTCAGACTCTC +
Preference number: 4 (lower is better)
Translates to: ARSWKEPRCLSTEEWIQKFWKGM*LVFQTL
Trigger: GAGAGTCTGAAAAACAAGCCACATCCCTTTCCAGAA...TTTCTGTATCCATTCCTCTGTTGAGAGACATCTGGGTTCTTTCCAGCTTCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp AAGGGAGCTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCAATTATCCAGACTCTTaGTCCAGAAAGGGCAGACCC +
Preference number: 4 (lower is better)
Translates to: KGAKTIQWKKDSIFNKWCNYPDS*SRKGRP
Trigger: GGGTCTGCCCTTTCTGGACCAAGAGTCTGGATAATT...GCACCATTTGTTGAAAATGCTGTCTTTCTTCCACTGGATGGTTTTAGCTCCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp ACCTTAGCTAGGGCTGACTTTCTCTCAGTTGTTTTATaGTCCAGTTCCTGCCAGTCTGTGTTTACATTCCTC +
Preference number: 4 (lower is better)
Translates to: TLARADFLSVVL*SSSCQSVFTFL
Trigger: GAGGAATGTAAACACAGACTGGCAGGAACTGGACAATAAAACAACTGAGAGAAAGTCAGCCCTAGCTAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR TCA 90 bp CCTCATGATACTTTGCGCACTTTGGCATTGATATTTTATGGGTATGCATGTGAGTTTCCTGAAGAGGCTTaGGGGTCTATCAAGCCTACA +
Preference number: 4 (lower is better)
Translates to: PHDTLRTLALIFYGYACEFPEEA*GSIKPT
Trigger: TGTAGGCTTGATAGACCCTCAAGCCTCTTCAGGAAA...CTCACATGCATACCCATAAAATATCAATGCCAAAGTGCGCAAAGTATCATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp CCTGCATACACATGGAAGATGATCAATGCCCTGCTCAATGATAACTTGGTCAAAGGTCCGAATGAAGGATaGAAACTGGATCTTGTCACT +
Preference number: 4 (lower is better)
Translates to: PAYTWKMINALLNDNLVKGPNEG*KLDLVT
Trigger: AGTGACAAGATCCAGTTTCCATCCTTCATTCGGACC...TTTGACCAAGTTATCATTGAGCAGGGCATTGATCATCTTCCATGTGTATGCAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp TCAGAATGGCTAAGTGCAAAAACTCAGGTGACAGCAGATGCTGCCAAGAATGTGGGAGTCTTCTTCCCTTaGAAAATGTCAAATTGTGTC +
Preference number: 4 (lower is better)
Translates to: SEWLSAKTQVTADAAKNVGVFFP*KMSNCV
Trigger: GACACAATTTGACATTTTCCAAGGGAAGAAGACTCC...CACATTCTTGGCAGCATCTGCTGTCACCTGAGTTTTTGCACTTAGCCATTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp GACAAACCCTTAGCCAGACTCACTAGAGGACACAGGGAAAGCATTCTAATTAACTTTAGAGAACTCACTTaGAGATCCTGCTTCAACTGG +
Preference number: 4 (lower is better)
Translates to: DKPLARLTRGHRESILINFRELT*RSCFNW
Trigger: CCAGTTGAAGCAGGATCTCCAAGTGAGTTCTCTAAA...GTTAATTAGAATGCTTTCCCTGTGTCCTCTAGTGAGTCTGGCTAAGGGTTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
3UTR CAA 72 bp GAAGACCCAGAAATGAACCCACACACCTATGATCACTaGATATTTGACAAAGAAGCTAAAACCACCCAGTGG +
Preference number: 4 (lower is better)
Translates to: EDPEMNPHTYDH*IFDKEAKTTQW
Trigger: CCACTGGGTGGTTTTAGCTTCTTTGTCAAATATCAAGTGATCATAGGTGTGTGGGTTCATTTCTGGGTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp TCCAAGAAGAAAGCAGAGAGAGCTTACACTAGCAGCTaGACAGCACACCTGAAAGCTCTAGAACAAAAAGAA +
Preference number: 4 (lower is better)
Translates to: SKKKAERAYTSS*TAHLKALEQKE
Trigger: TTCTTTTTGTTCTAGAGCTTTCAGGTGTGCTGTCAAGCTGCTAGTGTAAGCTCTCTCTGCTTTCTTCTTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp CACCAAGTGGAATACACCTGCAGGAGTCTTCTTCCCTaGGAAAATGTCAAATTGTGTCACCAAATCTCCATT +
Preference number: 4 (lower is better)
Translates to: HQVEYTCRSLLP*ENVKLCHQISI
Trigger: AATGGAGATTTGGTGACACAATTTGACATTTTCCAAGGGAAGAAGACTCCTGCAGGTGTATTCCACTTGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
CDS-3UTR GCA 90 bp ATGAAAGTGGTTCTAAAAGGCAGATTCATAGATAGGACTGAGTGCCTACCCTTACTGGCTGTACATTTCTaGATCTTCTGGACAGTCTCT +
Preference number: 4 (lower is better)
Translates to: MKVVLKGRFIDRTECLPLLAVHF*IFWTVS
Trigger: AGAGACTGTCCAGAAGATGCAGAAATGTACAGCCAG...TAAGGGTAGGCACTCAGTCCTATCTATGAATCTGCCTTTTAGAACCACTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp ATGAAAGTGGTTCTAAAAGGCAGATTCATAGATAGGACTGAGTGCCTACCCTTACCAAAGTCATCATCATaGGCAAGAATGATCACCCAG +
Preference number: 4 (lower is better)
Translates to: MKVVLKGRFIDRTECLPLPKSSS*ARMITQ
Trigger: CTGGGTGATCATTCTTGCCCATGATGATGACTTTGG...TAAGGGTAGGCACTCAGTCCTATCTATGAATCTGCCTTTTAGAACCACTTTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
3UTR CAA 72 bp TCATCATCATCATCACCTCATGATACTTTGCGCACTTaGGCATTGATATTTTATGGGTATGCATGTGAGGGG +
Preference number: 4 (lower is better)
Translates to: SSSSSPHDTLRT*ALIFYGYACEG
Trigger: CCCCTCACATGCATACCCATAAAATATCAATGCCAAAGTGCGCAAAGTATCATGAGGTGATGATGATGATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp TCCCCAATAGAGGAATTAGAGAAAGGACTGAAAGAGTaGAAGGGGTTTGCAACCCATAGGAAGAACAACAAT +
Preference number: 4 (lower is better)
Translates to: SPIEELEKGLKE*KGFATHRKNNN
Trigger: ATTGTTGTTCTTCCTATGGGTTGCAAACCCCTTCAACTCTTTCAGTCCTTTCTCTAATTCCTCTATTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp TTCCTGAACAGAACAGCAATGGCTTGCGCTGTAAGATaGAGAATTGACAAATGGGACCTAATGAAACTCCAA +
Preference number: 4 (lower is better)
Translates to: FLNRTAMACAVR*RIDKWDLMKLQ
Trigger: TTGGAGTTTCATTAGGTCCCATTTGTCAATTCTCAATCTTACAGCGCAAGCCATTGCTGTTCTGTTCAGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp ACCATGCTCGACCTAAAGATGTACTACAGAGCAATTTaGATAAAACCTGCATGGTACTGGTATAGCGACAGA +
Preference number: 4 (lower is better)
Translates to: TMLDLKMYYRAI*IKPAWYWYSDR
Trigger: TCTGTCGCTATACCAGTACCATGCAGGTTTTATCAAAATTGCTCTGTAGTACATCTTTAGGTCGAGCATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp TGCCTTTTAAGATTGAATTCTGATGTAGCTAAGCCTTaGCCAGTGTTCCAACATCCTAGAAAGTCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: CLLRLNSDVAKP*PVFQHPRKSLS
Trigger: GCTCAAGGACTTTCTAGGATGTTGGAACACTGGCAAAGGCTTAGCTACATCAGAATTCAATCTTAAAAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR TCA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACAGTACCATCAGAAAAGTaGAAGATAGAGAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTVPSEK*KIEKLP
Trigger: TGGCAGCTTCTCTATCTTTCACTTTTCTGATGGTAC...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp GACAAACCCTTAGCCAGACTCACTAGAGGACACAGGGAAAGCATTCTAATTAACCCATGTAGGATGAGCTaGAAATTTGAATTGCTTAAG +
Preference number: 4 (lower is better)
Translates to: DKPLARLTRGHRESILINPCRMS*KFELLK
Trigger: CTTAAGCAATTCAAATTTCCAGCTCATCCTACATGG...GTTAATTAGAATGCTTTCCCTGTGTCCTCTAGTGAGTCTGGCTAAGGGTTTGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGAGCTTTCACTGCAGATaGAGGTGGGCACAGTTATCT +
Preference number: 4 (lower is better)
Translates to: VTFRIASSITLSLRIKAKSFHCR*RWAQLS
Trigger: AGATAACTGTGCCCACCTCCATCTGCAGTGAAAGCT...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp GTGACATTCAGAATTGCCTCTAGTATTACACTATCACTTAGAATAAAAGCCAAGATCCCTGTCTGGGAATaGTGGAGAGGTAATCAACCA +
Preference number: 4 (lower is better)
Translates to: VTFRIASSITLSLRIKAKIPVWE*WRGNQP
Trigger: TGGTTGATTACCTCTCCACCATTCCCAGACAGGGAT...CTTGGCTTTTATTCTAAGTGATAGTGTAATACTAGAGGCAATTCTGAATGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp CAAGCTGTACCACAGAGCAATACTGATAAAACAAACAAACAAACAAAAACTGCAAATTATCCAGACTCTTaGTCCAGAAAGGGCAGACCC +
Preference number: 4 (lower is better)
Translates to: QAVPQSNTDKTNKQTKTANYPDS*SRKGRP
Trigger: GGGTCTGCCCTTTCTGGACCAAGAGTCTGGATAATT...TGCAGTTTTTGTTTGTTTGTTTGTTTTATCAGTATTGCTCTGTGGTACAGCTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp TCATCATCACCTCATGATACTTTGCGCACTTTGGCATaGATATTTTATGGGTATGCATGTGAGGGGTATTCT +
Preference number: 4 (lower is better)
Translates to: SSSPHDTLRTLA*IFYGYACEGYS
Trigger: AGAATACCCCTCACATGCATACCCATAAAATATCAATGCCAAAGTGCGCAAAGTATCATGAGGTGATGATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp CACCTCATGGTAACTTCTCCAAAACTGACCATACAATaGGTCACAAAACAGGTCTCAAGAGATACAAGAAGA +
Preference number: 4 (lower is better)
Translates to: HLMVTSPKLTIQ*VTKQVSRDTRR
Trigger: TCTTCTTGTATCTCTTGAGACCTGTTTTGTGACCAATTGTATGGTCAGTTTTGGAGAAGTTACCATGAGGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp TGGATTGGCAGGACTAATATAGTAAAAATGGCCATCTaGCCAAAAGCAATCTACAGAATCAATGCAATTCCC +
Preference number: 4 (lower is better)
Translates to: WIGRTNIVKMAI*PKAIYRINAIP
Trigger: GGGAATTGCATTGATTCTGTAGATTGCTTTTGGCAAGATGGCCATTTTTACTATATTAGTCCTGCCAATCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp GCTGGATATAAAATTAACTCAAACAAGTCAATGGCCTaGCTCTACACAAAGGACAAACAGGCTGAGAAAGAA +
Preference number: 4 (lower is better)
Translates to: AGYKINSNKSMA*LYTKDKQAEKE
Trigger: TTCTTTCTCAGCCTGTTTGTCCTTTGTGTAGAGCAAGGCCATTGACTTGTTTGAGTTAATTTTATATCCAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp ACTAACAAACTGGCTACACAAACAAGACCCAACATTTaGCTGCTTACAGGAAACTCAACTCAGAGAAAAAGA +
Preference number: 4 (lower is better)
Translates to: TNKLATQTRPNI*LLTGNSTQRKR
Trigger: TCTTTTTCTCTGAGTTGAGTTTCCTGTAAGCAGCAAAATGTTGGGTCTTGTTTGTGTAGCCAGTTTGTTAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR CCA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAAAACCAAAACAACTCTaGCTGTACATTTCTGCATCT +
Preference number: 4 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRKPKQL*LYISAS
Trigger: AGATGCAGAAATGTACAGCCAGAGTTGTTTTGGTTT...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
3UTR CAA 72 bp ACAACATCATCATCATCATCATCACCTCATGATACTTaGCGCACTTTGGCATTGATATTTTATGGGTATGCA +
Preference number: 4 (lower is better)
Translates to: TTSSSSSSPHDT*RTLALIFYGYA
Trigger: TGCATACCCATAAAATATCAATGCCAAAGTGCGCAAAGTATCATGAGGTGATGATGATGATGATGATGTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp AACAAACTCAAAGACAAAAACCACATGATCATCTCGTaGGATGCTGAGAAAGCATTTGACAAAATCCAACAC +
Preference number: 4 (lower is better)
Translates to: NKLKDKNHMIIS*DAEKAFDKIQH
Trigger: GTGTTGGATTTTGTCAAATGCTTTCTCAGCATCCAACGAGATGATCATGTGGTTTTTGTCTTTGAGTTTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp GGCACAACTGGTTGTTATCATGTAGAAGATTTCGAATaGATCCATACCTATTTCCTTGTACTAAGGTCAAAT +
Preference number: 4 (lower is better)
Translates to: GTTGCYHVEDFE*IHTYFLVLRSN
Trigger: ATTTGACCTTAGTACAAGGAAATAGGTATGGATCAATTCGAAATCTTCTACATGATAACAACCAGTTGTGCC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
3UTR CAA 72 bp CCTTGGAAAATGTCAAATTGTGTCACCAAATCTCCATaGGCATCAAACATAATCTTATTTCCATCAGAAGTC +
Preference number: 4 (lower is better)
Translates to: PWKMSNCVTKSP*ASNIILFPSEV
Trigger: GACTTCTGATGGAAATAAGATTATGTTTGATGCCAATGGAGATTTGGTGACACAATTTGACATTTTCCAAGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
CDS TCA 90 bp AGCCATGCTGGCATGTGTAGTTGGGGATGGGCTCCTCCTGCCCTGTaGGAAAGCCCATTGTCTCATAGAGCGCTCCATGCACTGAGTCTC +
Preference number: 5 (lower is better)
Translates to: SHAGMCSWGWAPPAL*ESPLSHRALHALSL
Trigger: GAGACTCAGTGCATGGAGCGCTCTATGAGACAATGGGCTTTCTCACAGGGCAGGAGGAGCCCATCCCCAACTACACATGCCAGCATGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000170412.2
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS GCA 90 bp CTGCCACCCACAATTACATCTCCAGGACGGTCAAAGCGAGGACTCTaGCTTGGAATTATCCAGACTCTTGGTCCAGAAAGGGCAGACCCA +
Preference number: 5 (lower is better)
Translates to: LPPTITSPGRSKRGL*LGIIQTLGPERADP
Trigger: TGGGTCTGCCCTTTCTGGACCAAGAGTCTGGATAATTCCAAGGCAGAGTCCTCGCTTTGACCGTCCTGGAGATGTAATTGTGGGTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS CCA 90 bp ACCCACAATTACATCTCCAGGACGGTCAAAGCGAGGACTCTGCCTTaGAATTATCCAGACTCTTGGTCCAGAAAGGGCAGACCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: THNYISRTVKARTLP*NYPDSWSRKGRPRE
Trigger: CTCTCTGGGTCTGCCCTTTCTGGACCAAGAGTCTGGATAATTCCAAGGCAGAGTCCTCGCTTTGACCGTCCTGGAGATGTAATTGTGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR CAA 90 bp CTCCTTATATACACCCCAGCACTGGGGAGGGCTATGTGTCCTCCTGGGATTGGTCTGAAGGTGAGGAACTaGGTCTCATTGAAGACATCT +
Preference number: 5 (lower is better)
Translates to: LLIYTPALGRAMCPPGIGLKVRN*VSLKTS
Trigger: AGATGTCTTCAATGAGACCAAGTTCCTCACCTTCAG...ACCAATCCCAGGAGGACACATAGCCCTCCCCAGTGCTGGGGTGTATATAAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS TCA 90 bp GAAACTGGATCTTGTCACTCAGACTGGGTAGTGAAGATGAGTAACTaGCCTGGGGAAACTTGTACAGCCCCAGAAGTCTGGCCATGGAGA +
Preference number: 5 (lower is better)
Translates to: ETGSCHSDWVVKMSN*PGETCTAPEVWPWR
Trigger: TCTCCATGGCCAGACTTCTGGGGCTGTACAAGTTTCCCCAGGTCAGTTACTCATCTTCACTACCCAGTCTGAGTGACAAGATCCAGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000170412.2
ENSMUST00000233892.2
CDS TCA 90 bp ACAGGTGGTGGGGCAGTGAAATTAGACAGGGTACCATCAGAAAAGTaGAAGATAGAGAAGCTGCCACCCACAATTACATCTCCAGGACGG +
Preference number: 5 (lower is better)
Translates to: TGGGAVKLDRVPSEK*KIEKLPPTITSPGR
Trigger: CCGTCCTGGAGATGTAATTGTGGGTGGCAGCTTCTCTATCTTTCACTTTTCTGATGGTACCCTGTCTAATTTCACTGCCCCACCACCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR CAA 90 bp GACAGCACACCTGAAAGCTCTAGAACAAAAAGAATCAAATACTCCCAAGAGGAGAGAACCCTCATGGCATaGGATGACAGTGTGCCGGGG +
Preference number: 5 (lower is better)
Translates to: DSTPESSRTKRIKYSQEERTLMA*DDSVPG
Trigger: CCCCGGCACACTGTCATCCAATGCCATGAGGGTTCT...CTCCTCTTGGGAGTATTTGATTCTTTTTGTTCTAGAGCTTTCAGGTGTGCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CAA 90 bp CATGCTCACTGGCAAGCATTTTTACCCATTCAGACATCTTCTAAGTCCTTAACATGTCCCTGGGGAAACTaGTACAGCCCCAGAAGTCTG +
Preference number: 5 (lower is better)
Translates to: HAHWQAFLPIQTSSKSLTCPWGN*YSPRSL
Trigger: CAGACTTCTGGGGCTGTACAAGTTTCCCCAGGGACA...TGTTAAGGACTTAGAAGATGTCTGAATGGGTAAAAATGCTTGCCAGTGAGCATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
CDS-3UTR CAA 90 bp GACAAACCCTTAGCCAGACTCACTAGAGGACACAGGGAAAGCATTCTAATTAACGATCACCCAGGACCATaGAAAGTGAATTACCAGCTG +
Preference number: 5 (lower is better)
Translates to: DKPLARLTRGHRESILINDHPGP*KVNYQL
Trigger: CAGCTGGTAATTCACTTTCAATGGTCCTGGGTGATC...GTTAATTAGAATGCTTTCCCTGTGTCCTCTAGTGAGTCTGGCTAAGGGTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CAA 90 bp CAACCAAAAGTTATCAAAAAGGATAAGGAAGGACACTTCAGACGGGTCAAAGGAATCTCACACTGCCTATaGTGCTGTACCTGGTGGCCT +
Preference number: 5 (lower is better)
Translates to: QPKVIKKDKEGHFRRVKGISHCL*CCTWWP
Trigger: AGGCCACCAGGTACAGCACAATAGGCAGTGTGAGAT...TCCTTTGACCCGTCTGAAGTGTCCTTCCTTATCCTTTTTGATAACTTTTGGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CAA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACAGAATTATCCAGACTCTaGGTCCAGAAAGGGCAGACC +
Preference number: 5 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTELSRL*VQKGQT
Trigger: GGTCTGCCCTTTCTGGACCAAGAGTCTGGATAATTC...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR CAA 90 bp CAAGCTGTACCACAGAGCAATACTGATAAAACAAACAAACAAACAAAAACTGCACTGACCTGGGGAAACTaGTACAGCCCCAGAAGTCTG +
Preference number: 5 (lower is better)
Translates to: QAVPQSNTDKTNKQTKTALTWGN*YSPRSL
Trigger: CAGACTTCTGGGGCTGTACAAGTTTCCCCAGGTCAG...TGCAGTTTTTGTTTGTTTGTTTGTTTTATCAGTATTGCTCTGTGGTACAGCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CAA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACAGATGGAAACTGGATCTaGTCACTCAGACTGGGTAGT +
Preference number: 5 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTDGNWI*SLRLGS
Trigger: ACTACCCAGTCTGAGTGACAAGATCCAGTTTCCATC...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CAA 90 bp GGAGAGGGAATGACACTCCTTATATACTCATCAAAGGACAATTCTACCAATAGAGAATTATCCAGACTCTaGGTCCAGAAAGGGCAGACC +
Preference number: 5 (lower is better)
Translates to: GEGMTLLIYSSKDNSTNRELSRL*VQKGQT
Trigger: GGTCTGCCCTTTCTGGACCAAGAGTCTGGATAATTC...TCTATTGGTAGAATTGTCCTTTGATGAGTATATAAGGAGTGTCATTCCCTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS-3UTR CAA 90 bp ATAAAGTTCTTGCTAACCGAATCCAAGAACACATCAAAACAATCATCCATCCTGGGAAGTTGTGAGAGTTaGTACCTTTCCTCTCCTGGT +
Preference number: 5 (lower is better)
Translates to: IKFLLTESKNTSKQSSILGSCES*YLSSPG
Trigger: ACCAGGAGAGGAAAGGTACAAACTCTCACAACTTCC...CAGGATGGATGATTGTTTTGATGTGTTCTTGGATTCGGTTAGCAAGAACTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CAA 90 bp TCAAAAATCTTTATCCAAATTAACTTTCCTGGAGGCCCTCCAGCACAAGGAACATTTCCATCAGAAGTCTaGAAGTACACATTTCTGAGG +
Preference number: 5 (lower is better)
Translates to: SKIFIQINFPGGPPAQGTFPSEV*KYTFLR
Trigger: CCTCAGAAATGTGTACTTCAAGACTTCTGATGGAAA...TGTTCCTTGTGCTGGAGGGCCTCCAGGAAAGTTAATTTGGATAAAGATTTTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS-3UTR CAA 90 bp GGTGTGTCACCTAACTTCCCTATTTTCTTCTGTATAAAAACTTTGATGCTGAGTGTCACCAAATCTCCATaGGCATCAAACATAATCTTA +
Preference number: 5 (lower is better)
Translates to: GVSPNFPIFFCIKTLMLSVTKSP*ASNIIL
Trigger: TAAGATTATGTTTGATGCCAATGGAGATTTGGTGAC...ACTCAGCATCAAAGTTTTTATACAGAAGAAAATAGGGAAGTTAGGTGACACACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000233892.2
CDS CCA 72 bp CAAGCGCCTTTACCCAATGAGCCACCTTGCTGTCCCTaGGGAAACTTGTACAGCCCCAGAAGTCTGGCCATG +
Preference number: 6 (lower is better)
Translates to: QAPLPNEPPCCP*GNLYSPRSLAM
Trigger: CATGGCCAGACTTCTGGGGCTGTACAAGTTTCCCCAGGGACAGCAAGGTGGCTCATTGGGTAAAGGCGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
CDS TCA 72 bp ACTCTGGGCTACCCGGTAGCTCCACATGGAGGCACTTaGAGTCTTCAGCACAGGTGGTGGGGCAGTGAAATT +
Preference number: 6 (lower is better)
Translates to: TLGYPVAPHGGT*SLQHRWWGSEI
Trigger: AATTTCACTGCCCCACCACCTGTGCTGAAGACTTCAAGTGCCTCCATGTGGAGCTACCGGGTAGCCCAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS CAA 72 bp TTACCCAATGAGCCACCTTGCTGTCCCTGGGGAAACTaGTACAGCCCCAGAAGTCTGGCCATGGAGACAGAC +
Preference number: 6 (lower is better)
Translates to: LPNEPPCCPWGN*YSPRSLAMETD
Trigger: GTCTGTCTCCATGGCCAGACTTCTGGGGCTGTACAAGTTTCCCCAGGGACAGCAAGGTGGCTCATTGGGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000232701.2
CDS CAA 90 bp CACCCACAATTACATCTCCAGGACGGTCAAAGCGAGGACTCTGCCTaGGAATTATCCAGACTCTTGGTCCAGAAAGGGCAGACCCAGAGA +
Preference number: 6 (lower is better)
Translates to: HPQLHLQDGQSEDSA*ELSRLLVQKGQTQR
Trigger: TCTCTGGGTCTGCCCTTTCTGGACCAAGAGTCTGGATAATTCCAAGGCAGAGTCCTCGCTTTGACCGTCCTGGAGATGTAATTGTGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS TCA 72 bp GAGAAAGCCCATTGTCTCATAGAGCGCTCCATGCACTaGGTCTCCAGAGTTTCGAATGGAGAAGCCCAGTGT +
Preference number: 6 (lower is better)
Translates to: EKAHCLIERSMH*VSRVSNGEAQC
Trigger: ACACTGGGCTTCTCCATTCGAAACTCTGGAGACTCAGTGCATGGAGCGCTCTATGAGACAATGGGCTTTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000170412.2
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS CCA 72 bp AGAGCGCTCCATGCACTGAGTCTCCAGAGTTTCGAATaGAGAAGCCCAGTGTCAAATTGGGCAACAAGTGAG +
Preference number: 6 (lower is better)
Translates to: RALHALSLQSFE*RSPVSNWATSE
Trigger: CTCACTTGTTGCCCAATTTGACACTGGGCTTCTCCATTCGAAACTCTGGAGACTCAGTGCATGGAGCGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000170412.2
ENSMUST00000232701.2
ENSMUST00000233892.2
CDS CCA 72 bp AAAGCGAGGACTCTGCCTTGGAATTATCCAGACTCTTaGTCCAGAAAGGGCAGACCCAGAGAGACATCCAAA +
Preference number: 6 (lower is better)
Translates to: KARTLPWNYPDS*SRKGRPRETSK
Trigger: TTTGGATGTCTCTCTGGGTCTGCCCTTTCTGGACCAAGAGTCTGGATAATTCCAAGGCAGAGTCCTCGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000232701.2
ENSMUST00000233892.2